View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18800_low_10 (Length: 231)
Name: NF18800_low_10
Description: NF18800
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18800_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 18 - 217
Target Start/End: Original strand, 24181944 - 24182142
Alignment:
| Q |
18 |
ttggtaatggtaatgatgatgcttccaacaatgtcattcatcatatgaatgaagatcatgggtgtgtcaatgttcatgtttcttctgttaatggtttatc |
117 |
Q |
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| T |
24181944 |
ttggtaatggtaatgatgatgcttccaacaatgtcattcatcatatgaatgaagatcatgggtgtgtcaatgttcatgtttcttctgttaatggtttatc |
24182043 |
T |
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| Q |
118 |
ttcttaattaattagtcttttttaattatttttcaaggaattaagataaatgggaattaagcttaatctagtagagattttatttttaccatgatctgtg |
217 |
Q |
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| T |
24182044 |
ttcttaattaattagtc-tttttaattatttttcaaggaactaagataaatgggaattaagcttaatctagtagagattttatttttaccatgatctgtg |
24182142 |
T |
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