View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18807_low_10 (Length: 333)
Name: NF18807_low_10
Description: NF18807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18807_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 14 - 316
Target Start/End: Complemental strand, 5856359 - 5856056
Alignment:
| Q |
14 |
aatttcttcaatggtgaaattcctacctctcttggtcacttaagaagccttcaatacttgtaaggatatatatgattttgaaattttaatcttaagctat |
113 |
Q |
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| T |
5856359 |
aatttcttcaatggtgaaattcctacctctcttggtcacttaagaagccttcaatacttgtaaggatatatatgattttgaaattttaatcttaagctat |
5856260 |
T |
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| Q |
114 |
t-ttttagtattaatctatgaattttgtagctgaaaagttattaaaattgtttcaggaggttgaataataacagtcttgttggtgaatgttcggaatcac |
212 |
Q |
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| T |
5856259 |
tcttttagtattaatctatgaattttgaagctgaaaagttattaaaattgtttcaggaggttgaataataacagtcttgttggtgaatgttcggaatcac |
5856160 |
T |
|
| Q |
213 |
tagctaacatgacacaacttgttttactgtaatatacacaacctattcttttgtttcattattctttaattctgtttatagtttttgcgttactaatgtt |
312 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
5856159 |
tagctaacatgacacaacttgttttactgtaatatacacaacctattcttttgtttcattattctttaattctgtttatagtttttgtgttactaatgtt |
5856060 |
T |
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| Q |
313 |
tctt |
316 |
Q |
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|||| |
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| T |
5856059 |
tctt |
5856056 |
T |
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