View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18809_high_24 (Length: 397)

Name: NF18809_high_24
Description: NF18809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18809_high_24
NF18809_high_24
[»] chr3 (44 HSPs)
chr3 (31-335)||(49465772-49466081)
chr3 (120-245)||(31010421-31010547)
chr3 (134-238)||(37273167-37273272)
chr3 (327-379)||(49465674-49465726)
chr3 (120-216)||(30923853-30923949)
chr3 (114-198)||(31710860-31710944)
chr3 (114-198)||(31711115-31711199)
chr3 (123-174)||(1360523-1360574)
chr3 (320-370)||(30443895-30443945)
chr3 (320-362)||(36189568-36189610)
chr3 (132-181)||(38318991-38319040)
chr3 (129-217)||(43115084-43115173)
chr3 (327-363)||(901933-901969)
chr3 (134-217)||(1810010-1810094)
chr3 (318-370)||(2825147-2825199)
chr3 (129-193)||(20192584-20192648)
chr3 (327-363)||(39980738-39980774)
chr3 (320-371)||(44488884-44488936)
chr3 (129-193)||(48588685-48588749)
chr3 (320-372)||(50600194-50600246)
chr3 (202-238)||(51929843-51929879)
chr3 (164-238)||(2100111-2100186)
chr3 (120-238)||(11253520-11253639)
chr3 (327-370)||(20880485-20880528)
chr3 (321-363)||(32582747-32582789)
chr3 (137-210)||(41452559-41452633)
chr3 (135-189)||(52412886-52412940)
chr3 (128-189)||(482774-482835)
chr3 (327-372)||(21367676-21367721)
chr3 (129-198)||(21574518-21574587)
chr3 (120-197)||(24887258-24887334)
chr3 (164-244)||(25459556-25459637)
chr3 (134-238)||(29771871-29771976)
chr3 (327-364)||(36631075-36631112)
chr3 (327-372)||(37273143-37273188)
chr3 (136-177)||(44374639-44374680)
chr3 (326-370)||(466201-466245)
chr3 (120-192)||(27290880-27290952)
chr3 (327-363)||(35696247-35696283)
chr3 (267-303)||(45083049-45083085)
chr3 (327-363)||(47132340-47132376)
chr3 (164-239)||(49605782-49605858)
chr3 (332-372)||(50952347-50952387)
chr3 (129-181)||(50952361-50952413)
[»] chr6 (38 HSPs)
chr6 (129-239)||(8420128-8420239)
chr6 (127-238)||(725587-725699)
chr6 (129-192)||(2455838-2455901)
chr6 (129-192)||(4420671-4420734)
chr6 (129-238)||(7148694-7148804)
chr6 (120-198)||(32577959-32578037)
chr6 (137-217)||(3775081-3775162)
chr6 (120-216)||(34538172-34538269)
chr6 (120-193)||(34939763-34939836)
chr6 (164-238)||(2460083-2460158)
chr6 (134-193)||(8010390-8010449)
chr6 (128-238)||(30863273-30863384)
chr6 (164-238)||(32917260-32917335)
chr6 (120-198)||(29957895-29957973)
chr6 (120-198)||(34939532-34939610)
chr6 (134-186)||(283128-283180)
chr6 (320-372)||(31624957-31625009)
chr6 (129-193)||(32171495-32171559)
chr6 (164-198)||(2027771-2027805)
chr6 (120-191)||(34405130-34405203)
chr6 (206-248)||(34429636-34429678)
chr6 (327-372)||(415313-415358)
chr6 (327-372)||(835265-835310)
chr6 (135-192)||(3155209-3155266)
chr6 (143-188)||(3774988-3775033)
chr6 (129-182)||(9667974-9668027)
chr6 (122-187)||(27595551-27595616)
chr6 (122-187)||(27693423-27693488)
chr6 (327-372)||(27909654-27909699)
chr6 (258-303)||(33890666-33890711)
chr6 (129-174)||(34544141-34544186)
chr6 (129-193)||(2205569-2205632)
chr6 (320-372)||(4420645-4420697)
chr6 (120-192)||(7931705-7931777)
chr6 (128-192)||(9027605-9027669)
chr6 (273-305)||(10617049-10617081)
chr6 (134-198)||(32171356-32171420)
chr6 (125-181)||(34403879-34403935)
[»] chr5 (38 HSPs)
chr5 (136-239)||(32172688-32172792)
chr5 (129-198)||(41052896-41052965)
chr5 (164-238)||(11457161-11457236)
chr5 (267-317)||(30291154-30291204)
chr5 (134-238)||(11297128-11297233)
chr5 (320-372)||(42582914-42582966)
chr5 (120-234)||(17259236-17259351)
chr5 (328-370)||(12857723-12857765)
chr5 (258-335)||(5963391-5963468)
chr5 (134-238)||(25720349-25720454)
chr5 (320-372)||(4014440-4014492)
chr5 (267-335)||(10771987-10772055)
chr5 (129-193)||(11700356-11700420)
chr5 (273-333)||(28776874-28776934)
chr5 (137-239)||(6109519-6109622)
chr5 (328-370)||(1130978-1131020)
chr5 (318-372)||(1899154-1899208)
chr5 (133-238)||(1899186-1899291)
chr5 (164-238)||(2092423-2092497)
chr5 (129-210)||(37611175-37611257)
chr5 (129-210)||(37787905-37787987)
chr5 (314-372)||(40590754-40590812)
chr5 (269-335)||(42573888-42573954)
chr5 (129-198)||(12242683-12242752)
chr5 (258-335)||(14675009-14675086)
chr5 (129-174)||(19138714-19138759)
chr5 (273-334)||(39105363-39105424)
chr5 (133-174)||(42582231-42582272)
chr5 (171-238)||(14599304-14599372)
chr5 (121-216)||(19177008-19177104)
chr5 (128-156)||(29588906-29588934)
chr5 (327-355)||(32009701-32009729)
chr5 (320-372)||(34160733-34160785)
chr5 (121-173)||(36638767-36638819)
chr5 (327-363)||(37954695-37954731)
chr5 (134-237)||(38728435-38728539)
chr5 (267-335)||(41819505-41819573)
chr5 (331-363)||(42500266-42500298)
[»] chr2 (54 HSPs)
chr2 (116-198)||(1742005-1742087)
chr2 (120-192)||(32821828-32821900)
chr2 (129-188)||(27237876-27237935)
chr2 (320-365)||(6167306-6167351)
chr2 (166-238)||(9996803-9996876)
chr2 (129-190)||(34652017-34652078)
chr2 (129-197)||(43065424-43065492)
chr2 (134-181)||(9595291-9595338)
chr2 (140-238)||(15120222-15120321)
chr2 (320-362)||(30331762-30331804)
chr2 (129-187)||(41042006-41042064)
chr2 (150-187)||(15967718-15967755)
chr2 (134-218)||(41809197-41809282)
chr2 (315-372)||(41817165-41817222)
chr2 (320-372)||(3078656-3078708)
chr2 (320-372)||(16398116-16398168)
chr2 (134-198)||(18884900-18884964)
chr2 (129-216)||(31228791-31228879)
chr2 (132-218)||(787363-787450)
chr2 (120-175)||(5781688-5781743)
chr2 (140-191)||(30538153-30538204)
chr2 (135-217)||(43456660-43456743)
chr2 (129-199)||(2410018-2410087)
chr2 (129-187)||(5133800-5133858)
chr2 (267-329)||(9833048-9833110)
chr2 (320-370)||(12464491-12464541)
chr2 (201-239)||(14302923-14302961)
chr2 (328-370)||(22971508-22971550)
chr2 (129-231)||(24098130-24098231)
chr2 (320-370)||(29316793-29316843)
chr2 (116-153)||(1741532-1741569)
chr2 (120-216)||(29429711-29429808)
chr2 (129-198)||(35555155-35555224)
chr2 (134-198)||(38388719-38388784)
chr2 (327-372)||(40279276-40279321)
chr2 (327-372)||(40279346-40279391)
chr2 (327-372)||(40279416-40279461)
chr2 (327-372)||(43173231-43173276)
chr2 (320-372)||(680505-680557)
chr2 (332-372)||(750684-750724)
chr2 (150-198)||(4550796-4550844)
chr2 (116-172)||(10198479-10198535)
chr2 (327-363)||(20952364-20952400)
chr2 (167-238)||(22878164-22878236)
chr2 (318-370)||(26143658-26143710)
chr2 (327-363)||(26202037-26202073)
chr2 (320-364)||(27695619-27695663)
chr2 (129-189)||(31739954-31740014)
chr2 (327-363)||(32592595-32592631)
chr2 (135-199)||(33256774-33256838)
chr2 (129-177)||(36852500-36852548)
chr2 (133-193)||(37186294-37186354)
chr2 (332-364)||(40835542-40835574)
chr2 (327-363)||(43279554-43279590)
[»] chr4 (44 HSPs)
chr4 (122-238)||(11264322-11264439)
chr4 (120-198)||(6987714-6987792)
chr4 (132-198)||(10812539-10812605)
chr4 (120-190)||(29467605-29467675)
chr4 (120-238)||(24370883-24371004)
chr4 (120-244)||(19394689-19394814)
chr4 (164-238)||(27123284-27123359)
chr4 (134-188)||(2874607-2874661)
chr4 (138-238)||(3637310-3637416)
chr4 (122-188)||(6978945-6979011)
chr4 (117-198)||(27725230-27725311)
chr4 (128-193)||(28406939-28407004)
chr4 (258-323)||(50298415-50298480)
chr4 (129-181)||(1312869-1312921)
chr4 (320-372)||(17975385-17975437)
chr4 (120-192)||(21157787-21157859)
chr4 (134-198)||(45128283-45128347)
chr4 (327-362)||(26890-26925)
chr4 (327-362)||(9760449-9760484)
chr4 (142-193)||(41097234-41097285)
chr4 (164-198)||(7749064-7749098)
chr4 (120-198)||(21952967-21953045)
chr4 (140-238)||(25896819-25896922)
chr4 (327-372)||(825506-825551)
chr4 (331-372)||(2592325-2592366)
chr4 (120-181)||(6466036-6466097)
chr4 (169-237)||(18628486-18628555)
chr4 (132-237)||(21592941-21593045)
chr4 (327-372)||(23676706-23676751)
chr4 (120-244)||(44319968-44320093)
chr4 (331-363)||(2244064-2244096)
chr4 (132-239)||(2841657-2841765)
chr4 (135-238)||(2996607-2996711)
chr4 (320-372)||(6364151-6364203)
chr4 (332-372)||(14011248-14011288)
chr4 (267-335)||(17751231-17751299)
chr4 (258-326)||(22539165-22539232)
chr4 (120-192)||(28614787-28614859)
chr4 (327-363)||(33586980-33587016)
chr4 (327-363)||(46588098-46588134)
chr4 (327-363)||(46592234-46592270)
chr4 (134-190)||(49032031-49032087)
chr4 (320-364)||(49940193-49940237)
chr4 (320-372)||(51630113-51630165)
[»] chr8 (41 HSPs)
chr8 (132-238)||(30191073-30191180)
chr8 (121-238)||(6950342-6950460)
chr8 (120-218)||(14949885-14949984)
chr8 (129-238)||(9700029-9700139)
chr8 (135-193)||(37740405-37740462)
chr8 (129-198)||(4055589-4055658)
chr8 (129-198)||(8558688-8558757)
chr8 (327-372)||(43504760-43504805)
chr8 (134-238)||(7008632-7008736)
chr8 (123-238)||(43368632-43368748)
chr8 (121-184)||(43704363-43704426)
chr8 (120-198)||(6509276-6509354)
chr8 (115-220)||(31875545-31875651)
chr8 (120-181)||(24258085-24258146)
chr8 (134-234)||(44401594-44401694)
chr8 (169-244)||(2091831-2091907)
chr8 (129-193)||(11183573-11183637)
chr8 (140-218)||(11569409-11569488)
chr8 (327-362)||(30657798-30657833)
chr8 (273-328)||(37444531-37444586)
chr8 (328-370)||(18133666-18133708)
chr8 (164-233)||(39049335-39049405)
chr8 (165-238)||(43393704-43393778)
chr8 (120-181)||(3254244-3254305)
chr8 (331-372)||(3536961-3537002)
chr8 (282-335)||(8216788-8216841)
chr8 (128-173)||(11121802-11121847)
chr8 (120-193)||(11415173-11415246)
chr8 (129-182)||(25869255-25869308)
chr8 (122-187)||(29262858-29262923)
chr8 (120-153)||(30277263-30277296)
chr8 (134-198)||(30987964-30988029)
chr8 (169-244)||(1561345-1561421)
chr8 (331-371)||(3537046-3537086)
chr8 (328-364)||(6881936-6881972)
chr8 (171-238)||(7918713-7918781)
chr8 (320-372)||(10114491-10114543)
chr8 (320-372)||(28769355-28769407)
chr8 (121-181)||(29169087-29169147)
chr8 (327-371)||(39881769-39881813)
chr8 (164-207)||(40071812-40071856)
[»] chr7 (35 HSPs)
chr7 (135-198)||(3500940-3501003)
chr7 (134-198)||(48157093-48157157)
chr7 (123-190)||(12234870-12234937)
chr7 (114-238)||(33894640-33894765)
chr7 (267-330)||(7612352-7612415)
chr7 (267-330)||(40598480-40598543)
chr7 (133-187)||(2767162-2767216)
chr7 (320-370)||(46280290-46280340)
chr7 (140-238)||(1418460-1418557)
chr7 (327-363)||(19022610-19022646)
chr7 (327-363)||(21568520-21568556)
chr7 (129-193)||(42281492-42281556)
chr7 (122-193)||(4966177-4966248)
chr7 (140-238)||(13960656-13960754)
chr7 (164-218)||(36537971-36538026)
chr7 (139-198)||(36598329-36598388)
chr7 (120-238)||(40428574-40428693)
chr7 (128-190)||(27626104-27626166)
chr7 (320-362)||(49019870-49019912)
chr7 (134-191)||(5017920-5017977)
chr7 (327-372)||(7244689-7244734)
chr7 (129-217)||(22387849-22387938)
chr7 (116-153)||(26935575-26935612)
chr7 (331-372)||(39280982-39281023)
chr7 (143-192)||(44686972-44687021)
chr7 (134-238)||(44808191-44808296)
chr7 (320-372)||(12792579-12792631)
chr7 (275-335)||(19718908-19718968)
chr7 (271-335)||(21619304-21619368)
chr7 (129-193)||(27496386-27496449)
chr7 (129-193)||(27503044-27503107)
chr7 (129-177)||(27517850-27517898)
chr7 (320-364)||(43694594-43694638)
chr7 (129-193)||(44615082-44615146)
chr7 (137-193)||(45078314-45078370)
[»] chr1 (49 HSPs)
chr1 (134-245)||(6231741-6231853)
chr1 (120-216)||(23373267-23373363)
chr1 (140-208)||(4202115-4202182)
chr1 (320-363)||(51929564-51929607)
chr1 (129-238)||(1662601-1662711)
chr1 (320-370)||(5741608-5741658)
chr1 (129-238)||(6976953-6977062)
chr1 (129-238)||(31517672-31517782)
chr1 (327-372)||(12564515-12564560)
chr1 (120-193)||(15437982-15438055)
chr1 (129-234)||(32859883-32859988)
chr1 (134-238)||(33723314-33723419)
chr1 (327-363)||(3234040-3234076)
chr1 (320-372)||(14629982-14630034)
chr1 (130-198)||(15579511-15579579)
chr1 (166-198)||(24153346-24153378)
chr1 (134-238)||(30815586-30815690)
chr1 (322-370)||(37631577-37631625)
chr1 (164-238)||(4549473-4549548)
chr1 (319-370)||(5720926-5720977)
chr1 (136-222)||(17420238-17420325)
chr1 (129-192)||(30259465-30259528)
chr1 (120-175)||(33975589-33975644)
chr1 (131-177)||(3597275-3597321)
chr1 (320-370)||(7137016-7137066)
chr1 (273-335)||(7137110-7137172)
chr1 (120-198)||(10439705-10439783)
chr1 (137-191)||(17628635-17628689)
chr1 (129-218)||(26179500-26179589)
chr1 (266-335)||(4549758-4549827)
chr1 (169-217)||(5157140-5157189)
chr1 (120-193)||(7262496-7262569)
chr1 (335-372)||(10809362-10809399)
chr1 (116-153)||(28083308-28083345)
chr1 (201-238)||(35017683-35017720)
chr1 (327-372)||(42174864-42174909)
chr1 (320-365)||(44422701-44422746)
chr1 (201-238)||(48748527-48748564)
chr1 (283-335)||(1829063-1829115)
chr1 (171-234)||(4118807-4118871)
chr1 (320-372)||(6102156-6102208)
chr1 (328-372)||(15784339-15784383)
chr1 (327-363)||(17603409-17603445)
chr1 (138-198)||(24502801-24502861)
chr1 (320-372)||(27140480-27140532)
chr1 (129-181)||(35925718-35925770)
chr1 (320-352)||(41505688-41505720)
chr1 (129-189)||(45999270-45999330)
chr1 (327-363)||(49938756-49938792)
[»] scaffold0159 (1 HSPs)
scaffold0159 (120-175)||(27020-27075)
[»] scaffold0147 (2 HSPs)
scaffold0147 (120-197)||(12678-12755)
scaffold0147 (327-372)||(23640-23685)
[»] scaffold0332 (1 HSPs)
scaffold0332 (137-181)||(1123-1167)


Alignment Details
Target: chr3 (Bit Score: 270; Significance: 1e-151; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 31 - 335
Target Start/End: Complemental strand, 49466081 - 49465772
Alignment:
Q  31 aatgaattttagaaaaccatttgtttagaattaagggcttatagcaaaattgcttgtcataaaataaaat-----aaaagattgcatccttaatctatcc 125  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||     |||||||||||||||||||||||||    
T  49466081 aatgaattttagaaaaccatttgtttagaattaagcgcttatagcaaaagtgcttatcataaaataaaataaaataaaagattgcatccttaatctatcc 49465982  T
Q  126 taaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaaactctcacaagtgtttatgctaatgga 225  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49465981 taaagagtttatggaaataagttgaaaatagttcatggacatgtcataagttgtttctataagctctcacaaaactctcacaagtgtttatgctaatgga 49465882  T
Q  226 taagctcaaataaaacaatttaaggcgctatgtggacaaataacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagct 325  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49465881 taagctcaaataaaacaatttaaggcgctatgtggacaaataacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagct 49465782  T
Q  326 atttttataa 335  Q
    ||||||||||    
T  49465781 atttttataa 49465772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 120 - 245
Target Start/End: Original strand, 31010421 - 31010547
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgc 218  Q
    ||||| || |||| |||||||| ||||||||||| || | ||| ||||||||||||||||||||||||||| ||||||| || |||||||||  |||||     
T  31010421 ctatcatagagagcttatggaattaagctgaaaacagcttatggacatgtcataagttgtttctataagctttcacaaacacactcacaagttcttatgt 31010520  T
Q  219 taatggataagctcaaataaaacaatt 245  Q
    || | | |||| |||||||||| ||||    
T  31010521 tagtagttaagttcaaataaaataatt 31010547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 37273167 - 37273272
Alignment:
Q  134 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctc 232  Q
    ||||||||||||| |||||| |  | ||| ||||||||||||||||||| |||||||||| |||| | |||||| |||| ||||||||||  ||||| ||    
T  37273167 ttatggaaataagttgaaaacaacttatggacatgtcataagttgtttccataagctctcccaaacagtctcaccagtgcttatgctaataaataagttc 37273266  T
Q  233 aaataa 238  Q
    ||||||    
T  37273267 aaataa 37273272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 49465726 - 49465674
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataagcttaaaacacctaatg 379  Q
    |||| |||||||||| |||||||||||||||||||||||||||| ||||||||    
T  49465726 ttttcataagctatactggagaacttatggaaataagcttaaaaaacctaatg 49465674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 30923949 - 30923853
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttat 216  Q
    |||||||| ||||||||| ||||||||||||||| || | ||  |||||||||||| |||||| || |||||||| ||| | ||||||||||||||||    
T  30923949 ctatcctagagagtttatagaaataagctgaaaacagcttatagacatgtcataagctgtttccat-agctctcataaacagtctcacaagtgtttat 30923853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 31710944 - 31710860
Alignment:
Q  114 cttaatctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    ||||| ||||| || |||| || ||||| ||||||||||| || |||||  ||||||||||||||||| |||||||| |||||||    
T  31710944 cttaacctatcttagagagcttttggaattaagctgaaaacagctcatgggcatgtcataagttgtttttataagctttcacaaa 31710860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 31711199 - 31711115
Alignment:
Q  114 cttaatctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    ||||| ||||| || |||| || ||||| ||||||||||| || |||||  ||||||||||||||||| |||||||| |||||||    
T  31711199 cttaacctatcttagagagcttttggaattaagctgaaaacagctcatgggcatgtcataagttgtttttataagctttcacaaa 31711115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 1360574 - 1360523
Alignment:
Q  123 tcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataa 174  Q
    ||||||||||||| |||||||||||||||||||| | ||| |||||||||||    
T  1360574 tcctaaagagtttgtggaaataagctgaaaatagcttatggacatgtcataa 1360523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 370
Target Start/End: Original strand, 30443895 - 30443945
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagcttaaaa 370  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||||| ||||    
T  30443895 taagctgtttttataaactatattggagaacttatgaaaataagctgaaaa 30443945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 36189568 - 36189610
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataa 362  Q
    ||||||||||||||||| |||||||||||||||||| ||||||    
T  36189568 taagctatttttataagatatattggagaacttatgaaaataa 36189610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 38318991 - 38319040
Alignment:
Q  132 gtttatggaaataagctgaaaatagttcatgtacatgtcataagttgttt 181  Q
    ||||||||||||||||||||||||| | ||| |||||| |||||||||||    
T  38318991 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 38319040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 43115084 - 43115173
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatg 217  Q
    |||| |||||||||||||||||||| |  | ||| ||||||||||||||||||| |||| ||||  |||| | ||||||||||| |||||    
T  43115084 agagcttatggaaataagctgaaaacaagttatggacatgtcataagttgtttccataaactcttccaaacaatctcacaagtgattatg 43115173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 901933 - 901969
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataag 363  Q
    ||||||||||||||||||||||||||||| |||||||    
T  901933 tttttataagctatattggagaacttatgaaaataag 901969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 217
Target Start/End: Original strand, 1810010 - 1810094
Alignment:
Q  134 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatg 217  Q
    |||| ||||||||| ||||| |  ||||| |||||||||||||||||||  ||||||||| |||| | ||||||||||| |||||    
T  1810010 ttatagaaataagcagaaaacaactcatggacatgtcataagttgtttccgtaagctctctcaaatagtctcacaagtgattatg 1810094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 370
Target Start/End: Original strand, 2825147 - 2825199
Alignment:
Q  318 tgtaagctatttttataagctatattggagaacttatggaaataagcttaaaa 370  Q
    |||||| |||||| ||||||||| ||||||| |||||| ||||||||||||||    
T  2825147 tgtaagttattttcataagctatcttggagagcttatgaaaataagcttaaaa 2825199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 20192648 - 20192584
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 193  Q
    |||| |||||||||| || |||||| || | ||| |||||||||||| |||||||||||||||||    
T  20192648 agagcttatggaaatgagttgaaaacagcttatggacatgtcataagctgtttctataagctctc 20192584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 39980738 - 39980774
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataag 363  Q
    ||||||||||||||||||||||||||||| |||||||    
T  39980738 tttttataagctatattggagaacttatgaaaataag 39980774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 371
Target Start/End: Original strand, 44488884 - 44488936
Alignment:
Q  320 taagctattttt-ataagctatattggagaacttatggaaataagcttaaaac 371  Q
    |||||||||||| ||||||||| || ||||||||||||||||||||| |||||    
T  44488884 taagctatttttcataagctatcttagagaacttatggaaataagctgaaaac 44488936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 48588685 - 48588749
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 193  Q
    ||||||| ||||||| ||||||||| | || | | |||||||||||||||||| |||||||||||    
T  48588685 agagtttgtggaaattagctgaaaacactttaagaacatgtcataagttgtttatataagctctc 48588749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 372
Target Start/End: Complemental strand, 50600246 - 50600194
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||||| |||| || ||||||||||||||||||||| ||||||||| ||||||    
T  50600246 taagctgttttcatcagctatattggagaacttatgaaaataagctgaaaaca 50600194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 51929843 - 51929879
Alignment:
Q  202 ctcacaagtgtttatgctaatggataagctcaaataa 238  Q
    ||||||||||||||||||||| |||||||||||||||    
T  51929843 ctcacaagtgtttatgctaatagataagctcaaataa 51929879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 2100186 - 2100111
Alignment:
Q  164 acatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataa 238  Q
    |||||||||||| ||| || ||||||||||||||| | ||||||||||||||  ||| |  |||||||||||||||    
T  2100186 acatgtcataagctgtctccataagctctcacaaacagtctcacaagtgttttagctgaaagataagctcaaataa 2100111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 120 - 238
Target Start/End: Original strand, 11253520 - 11253639
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgc 218  Q
    |||||||| |||| ||| ||||||| |||||||| |||| ||  | |||||||||||||||| |||||  |||  |||| | |||| |||||| ||||||    
T  11253520 ctatcctagagagcttagggaaataggctgaaaacagtttatagatatgtcataagttgtttttataaattctgccaaacagtctctcaagtgcttatgc 11253619  T
Q  219 taatggataagctcaaataa 238  Q
    || | ||||| |||||||||    
T  11253620 tagtagataatctcaaataa 11253639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 20880485 - 20880528
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataagcttaaaa 370  Q
    |||||| |||||||||||||||||||||| ||||||||| ||||    
T  20880485 tttttaaaagctatattggagaacttatgaaaataagctcaaaa 20880528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 363
Target Start/End: Original strand, 32582747 - 32582789
Alignment:
Q  321 aagctatttttataagctatattggagaacttatggaaataag 363  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||    
T  32582747 aagctgttttcataagctattttggagaacttatggaaataag 32582789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 41452559 - 41452633
Alignment:
Q  137 tggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagt 210  Q
    |||||||||| |||||| || | ||  |||| |||||||||||||||||||| |||| |||| ||||||||||||    
T  41452559 tggaaataaggtgaaaacagcttatagacatatcataagttgtttctataaggtctctcaaatactctcacaagt 41452633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 52412940 - 52412886
Alignment:
Q  135 tatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagc 189  Q
    ||||||||||||||||||| || | ||  |||||||||| |||||||||||||||    
T  52412940 tatggaaataagctgaaaacagcttataaacatgtcataggttgtttctataagc 52412886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 189
Target Start/End: Complemental strand, 482835 - 482774
Alignment:
Q  128 aagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagc 189  Q
    ||||||||||||||||||||||||||||    |||  ||||| |||||||||||| ||||||    
T  482835 aagagtttatggaaataagctgaaaatatcatatgagcatgttataagttgtttccataagc 482774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 21367676 - 21367721
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||| ||||||||| |||||||||||||| ||||||||| ||||||    
T  21367676 ttttcataagctatcttggagaacttatgaaaataagctgaaaaca 21367721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 21574518 - 21574587
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    |||| ||||||||||||||| |||  || | ||| ||||||||||||||||||  |||||||||| ||||    
T  21574518 agagcttatggaaataagctaaaagcagcttatgaacatgtcataagttgttttcataagctctcccaaa 21574587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 24887334 - 24887258
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaa 197  Q
    |||||||  |||| |||||| ||||||||||||| |||| ||| ||||||||||| ||||||| ||| | ||||||||    
T  24887334 ctatcctggagagcttatgggaataagctgaaaacagttaatg-acatgtcataaattgtttccatacgatctcacaa 24887258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 244
Target Start/End: Complemental strand, 25459637 - 25459556
Alignment:
Q  164 acatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataaaacaat 244  Q
    ||||| |||||  ||||||| ||||||||  |||| | ||||||||||| |||||||| | |||||||||||||||| ||||    
T  25459637 acatgacataatctgtttctctaagctcttccaaacaatctcacaagtgcttatgctagttgataagctcaaataaatcaat 25459556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 29771871 - 29771976
Alignment:
Q  134 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctc 232  Q
    ||||||||||||| |||||| |  | ||| ||||||| |||||||||||| |||||||||| ||| | |||||| ||| ||||||  | | |||||| ||    
T  29771871 ttatggaaataagttgaaaacaacttatggacatgtcctaagttgtttctttaagctctcataaatagtctcacgagtatttatgtcagttgataagttc 29771970  T
Q  233 aaataa 238  Q
    ||||||    
T  29771971 aaataa 29771976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 364
Target Start/End: Complemental strand, 36631112 - 36631075
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataagc 364  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  36631112 tttttatgagctatattggagaacttatgaaaataagc 36631075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 37273143 - 37273188
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||| ||||||||| |||||||||||||||||||||| | ||||||    
T  37273143 ttttcataagctatcttggagaacttatggaaataagttgaaaaca 37273188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 44374680 - 44374639
Alignment:
Q  136 atggaaataagctgaaaatagttcatgtacatgtcataagtt 177  Q
    ||||||||||| ||||||||| | ||||||||||||||||||    
T  44374680 atggaaataaggtgaaaatagcttatgtacatgtcataagtt 44374639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 370
Target Start/End: Original strand, 466201 - 466245
Alignment:
Q  326 atttttataagctatattggagaacttatggaaataagcttaaaa 370  Q
    ||||| ||||||||| |||||||||||||| ||||||||| ||||    
T  466201 attttcataagctatgttggagaacttatgaaaataagctaaaaa 466245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 192
Target Start/End: Complemental strand, 27290952 - 27290880
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctct 192  Q
    |||||||  |||||| |||||||||||||||||| || | |||  ||||||||||| |||||  |||||||||    
T  27290952 ctatcctgcagagttcatggaaataagctgaaaacagcttatgggcatgtcataagctgttttcataagctct 27290880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 35696247 - 35696283
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataag 363  Q
    |||||||||||||||||||||||||| || |||||||    
T  35696247 tttttataagctatattggagaacttgtgaaaataag 35696283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 303
Target Start/End: Original strand, 45083049 - 45083085
Alignment:
Q  267 aacttaatttgcagtttatagcataatcacttatcat 303  Q
    ||||||||||||||||||||||||||  |||||||||    
T  45083049 aacttaatttgcagtttatagcataaaaacttatcat 45083085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 47132340 - 47132376
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataag 363  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  47132340 tttttataagctatattggagaagttatgaaaataag 47132376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 49605858 - 49605782
Alignment:
Q  164 acatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataaa 239  Q
    ||||||||||||||||||| || | ||||| |||| ||||||||||||  ||||||||   ||||| ||||||||||    
T  49605858 acatgtcataagttgtttccatgaactctctcaaacactctcacaagtacttatgctagaagataaactcaaataaa 49605782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 50952347 - 50952387
Alignment:
Q  332 ataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||| |||| ||||||| |||||||||||||||||||||||    
T  50952347 ataaactatcttggagagcttatggaaataagcttaaaaca 50952387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 50952361 - 50952413
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgttt 181  Q
    |||| ||||||||||||||| |||| |||| ||| |||||||||||| |||||    
T  50952361 agagcttatggaaataagcttaaaacagtttatgaacatgtcataagctgttt 50952413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 129 - 239
Target Start/End: Complemental strand, 8420239 - 8420128
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcac-aaaactctcacaagtgtttatgctaatggata 227  Q
    |||| ||||||||||||| ||||||||| |  || |||||||||||| | ||||||||||||||||| || | |||||||||||||||||  ||| ||||    
T  8420239 agagcttatggaaataagttgaaaatagcttgtggacatgtcataagctatttctataagctctcactaacagtctcacaagtgtttatgtcaatagata 8420140  T
Q  228 agctcaaataaa 239  Q
    ||||||||||||    
T  8420139 agctcaaataaa 8420128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 238
Target Start/End: Complemental strand, 725699 - 725587
Alignment:
Q  127 aaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcac-aaaactctcacaagtgtttatgctaatgga 225  Q
    |||||| ||||||||||||||||||||||||  | | ||||||||||||||||||  |||||||||| | ||   |||||| |||||||||| || | ||    
T  725699 aaagagcttatggaaataagctgaaaatagtctacggacatgtcataagttgttttcataagctctctcgaatgttctcacgagtgtttatgttagttga 725600  T
Q  226 taagctcaaataa 238  Q
    ||| |||||||||    
T  725599 taatctcaaataa 725587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 2455838 - 2455901
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctct 192  Q
    |||| ||||||||||||| ||||||||||| |||  |||||||||||||||||| |||||||||    
T  2455838 agagcttatggaaataagttgaaaatagtttatgggcatgtcataagttgtttccataagctct 2455901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 4420671 - 4420734
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctct 192  Q
    |||| |||||||||||||||||||| || | ||| ||||||||||| |||||||||||||||||    
T  4420671 agagcttatggaaataagctgaaaacagcttatgaacatgtcataatttgtttctataagctct 4420734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 129 - 238
Target Start/End: Original strand, 7148694 - 7148804
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctct-cacaaaactctcacaagtgtttatgctaatggata 227  Q
    |||| ||||| ||||||| ||||||||| | ||| ||| |||||||||||||||  |||||||| |  || ||||||||||||| |||||| | | ||||    
T  7148694 agagcttatgaaaataagttgaaaatagcttatggacaagtcataagttgtttccgtaagctctgctgaacactctcacaagtgcttatgcgactagata 7148793  T
Q  228 agctcaaataa 238  Q
    |||||||||||    
T  7148794 agctcaaataa 7148804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 120 - 198
Target Start/End: Complemental strand, 32578037 - 32577959
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    ||||||| |||||  ||||||||||||||||||| || ||| | ||||||||||||||||||  |||||||||| ||||    
T  32578037 ctatcctgaagagcatatggaaataagctgaaaacagctcaaggacatgtcataagttgttttcataagctctctcaaa 32577959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 3775162 - 3775081
Alignment:
Q  137 tggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctc-tcacaaaactctcacaagtgtttatg 217  Q
    |||| |||||||||||| |||| ||| |||||||||||| ||||||||||||||| ||  || | |||||||||||||||||    
T  3775162 tggacataagctgaaaacagtttatgcacatgtcataagctgtttctataagctcttccgaatagtctcacaagtgtttatg 3775081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 34538269 - 34538172
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttat 216  Q
    |||||||| ||||||| |  ||||||||||||||||||| ||| ||||||| |||| ||||| |||||| |||| |||| | ||||||||||| ||||    
T  34538269 ctatcctagagagtttgtataaataagctgaaaatagtttatggacatgtcgtaagctgtttttataagatctctcaaatagtctcacaagtgcttat 34538172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 34939763 - 34939836
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 193  Q
    |||||||  ||||||||||||||||||||||||| | || ||| |||||||||||| ||||||  |||||||||    
T  34939763 ctatcctggagagtttatggaaataagctgaaaacaatttatggacatgtcataagctgtttccgtaagctctc 34939836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 2460158 - 2460083
Alignment:
Q  164 acatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataa 238  Q
    ||||||||||||||||||| |||||||||| |||| | ||||||||||  |||||||| |  ||||||||||||||    
T  2460158 acatgtcataagttgtttccataagctctctcaaacagtctcacaagtacttatgctagtttataagctcaaataa 2460083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 8010390 - 8010449
Alignment:
Q  134 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 193  Q
    |||| ||||||| |||||||||| | ||| ||||||||| ||||||||||||||||||||    
T  8010390 ttatagaaataaactgaaaatagcttatgaacatgtcatgagttgtttctataagctctc 8010449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 30863273 - 30863384
Alignment:
Q  128 aagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggat 226  Q
    ||||| |||| ||| ||||||||||| |  | ||||||||||||||||||||||  |||||||||  |||| | ||| |||||||||||||| |||  ||    
T  30863273 aagagcttatagaagtaagctgaaaacaacttatgtacatgtcataagttgttttcataagctctaccaaagagtctaacaagtgtttatgccaataaat 30863372  T
Q  227 aagctcaaataa 238  Q
    | ||||||||||    
T  30863373 aggctcaaataa 30863384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 238
Target Start/End: Original strand, 32917260 - 32917335
Alignment:
Q  164 acatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataa 238  Q
    ||||||||||||||||||| |||||||||| |||| | |||||||||||||||| ||| | | ||||||| |||||    
T  32917260 acatgtcataagttgtttccataagctctcccaaacagtctcacaagtgtttattctagtaggtaagctctaataa 32917335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 198
Target Start/End: Complemental strand, 29957973 - 29957895
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    |||| ||| |||| ||||||||||||||||||||||| ||||| ||||||||| |||  || | |||||||||| ||||    
T  29957973 ctattctagagagcttatggaaataagctgaaaatagatcatgaacatgtcatgagtatttcccataagctctctcaaa 29957895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 198
Target Start/End: Original strand, 34939532 - 34939610
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    ||||||| ||||| |||||||||||||||||||| |  | | | || |||||||||||||||| |||||||||| ||||    
T  34939532 ctatcctgaagaggttatggaaataagctgaaaacaacttacggacgtgtcataagttgtttccataagctctctcaaa 34939610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 283128 - 283180
Alignment:
Q  134 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctata 186  Q
    |||| |||||||||||||||||||| ||| |||||||||||| ||||| ||||    
T  283128 ttatagaaataagctgaaaatagtttatggacatgtcataagctgtttttata 283180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 372
Target Start/End: Complemental strand, 31625009 - 31624957
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    ||||| |||||  ||||||||||||||||||||||| ||||||||| ||||||    
T  31625009 taagccattttcgtaagctatattggagaacttatgaaaataagctgaaaaca 31624957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 32171495 - 32171559
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 193  Q
    |||| |||||||||||||||||||| |||||||| |  | ||||||||||||||  |||||||||    
T  32171495 agagcttatggaaataagctgaaaacagttcatggaggtatcataagttgtttccttaagctctc 32171559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 198
Target Start/End: Complemental strand, 2027805 - 2027771
Alignment:
Q  164 acatgtcataagttgtttctataagctctcacaaa 198  Q
    |||||||||||||||||||||||||||||| ||||    
T  2027805 acatgtcataagttgtttctataagctctcccaaa 2027771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 120 - 191
Target Start/End: Original strand, 34405130 - 34405203
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaa--tagttcatgtacatgtcataagttgtttctataagctc 191  Q
    ||||||| || ||| ||||| |||||||||||||  ||| | ||| ||||| ||||||||||||||||||||||    
T  34405130 ctatcctgaaaagtgtatgggaataagctgaaaacatagcttatggacatggcataagttgtttctataagctc 34405203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 34429678 - 34429636
Alignment:
Q  206 caagtgtttatgctaatggataagctcaaataaaacaatttaa 248  Q
    ||||||||||||||| | |||||||||||||||| ||||||||    
T  34429678 caagtgtttatgctagtagataagctcaaataaaccaatttaa 34429636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 415313 - 415358
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    ||||||||||||||| ||||||||||||||||  ||||| ||||||    
T  415313 tttttataagctatagtggagaacttatggaataaagctgaaaaca 415358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 372
Target Start/End: Complemental strand, 835310 - 835265
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||| ||||||||| |||||||||||||| ||||||||| ||||||    
T  835310 ttttcataagctatcttggagaacttatgaaaataagctgaaaaca 835265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 3155209 - 3155266
Alignment:
Q  135 tatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctct 192  Q
    ||||||||||||||||||| || | ||  |||||||||||||||| | ||||||||||    
T  3155209 tatggaaataagctgaaaacagcttatagacatgtcataagttgtgtatataagctct 3155266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 3775033 - 3774988
Alignment:
Q  143 taagctgaaaatagttcatgtacatgtcataagttgtttctataag 188  Q
    ||||||||||| |||| |||||||||||| ||| ||||||||||||    
T  3775033 taagctgaaaacagtttatgtacatgtcacaagctgtttctataag 3774988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 9668027 - 9667974
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttc 182  Q
    |||| ||||||||||||| |||||| || | ||| |||||||||||||||||||    
T  9668027 agagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtttc 9667974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 27595616 - 27595551
Alignment:
Q  122 atcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataa 187  Q
    |||||| |||||||| |||||| |  ||||||||| | ||| ||||||||||||||||||| ||||    
T  27595616 atcctagagagtttacggaaattacttgaaaatagcttatgaacatgtcataagttgtttccataa 27595551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 27693488 - 27693423
Alignment:
Q  122 atcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataa 187  Q
    |||||| |||||||| |||||| |  ||||||||| | ||| ||||||||||||||||||| ||||    
T  27693488 atcctagagagtttacggaaattacttgaaaatagcttatgaacatgtcataagttgtttccataa 27693423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 372
Target Start/End: Complemental strand, 27909699 - 27909654
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||||||||||| || |||||| |||||||||||||||| ||||||    
T  27909699 tttttataagctttactggagagcttatggaaataagctgaaaaca 27909654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 33890666 - 33890711
Alignment:
Q  258 tggacaaataacttaatttgcagtttatagcataatcacttatcat 303  Q
    |||| |||||||||| ||||||| ||||||||||| ||||||||||    
T  33890666 tggataaataacttattttgcagcttatagcataaacacttatcat 33890711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 34544186 - 34544141
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataa 174  Q
    ||||||||| |||||||| ||||||||||| ||| |||||||||||    
T  34544186 agagtttatagaaataagatgaaaatagtttatggacatgtcataa 34544141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 2205632 - 2205569
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 193  Q
    |||| |||||||||||||||||| |||||| ||  ||||||| ||| ||||||| ||||||||||    
T  2205632 agagcttatggaaataagctgaatatagtttataaacatgtcctaa-ttgtttccataagctctc 2205569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 372
Target Start/End: Original strand, 4420645 - 4420697
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||| ||||||  |||||||| ||||||| |||||||||||||||| ||||||    
T  4420645 taagttattttcctaagctatcttggagagcttatggaaataagctgaaaaca 4420697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 192
Target Start/End: Complemental strand, 7931777 - 7931705
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctct 192  Q
    |||||||| |||| ||| |||||||||||||||| |  | | | ||||||||||||||||||  |||||||||    
T  7931777 ctatcctacagagcttacggaaataagctgaaaacaacttaagaacatgtcataagttgttttcataagctct 7931705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 9027605 - 9027669
Alignment:
Q  128 aagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctct 192  Q
    ||||| ||||| |||||||||||||| |  | ||| |||||||||||||| |||| |||||||||    
T  9027605 aagagcttatgaaaataagctgaaaacaacttatggacatgtcataagttatttccataagctct 9027669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 305
Target Start/End: Complemental strand, 10617081 - 10617049
Alignment:
Q  273 atttgcagtttatagcataatcacttatcatga 305  Q
    |||||||||||||||||||| ||||||||||||    
T  10617081 atttgcagtttatagcataagcacttatcatga 10617049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 32171420 - 32171356
Alignment:
Q  134 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    ||||||||||||||||||||||| |  || || ||||||||| |||||  |||||||||| ||||    
T  32171420 ttatggaaataagctgaaaatagcttctggacttgtcataagctgttttcataagctctctcaaa 32171356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 34403879 - 34403935
Alignment:
Q  125 ctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgttt 181  Q
    |||||||| ||||||||||||| |||||| |  | ||| ||||||||||||||||||    
T  34403879 ctaaagagcttatggaaataaggtgaaaacaccttatgaacatgtcataagttgttt 34403935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 6e-19; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 32172688 - 32172792
Alignment:
Q  136 atggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaa 234  Q
    ||||||||||||||||||| | | ||| ||||||||||||||||||| |||||||||| ||||   ||||||||||| |||||||| |  ||||||||||    
T  32172688 atggaaataagctgaaaatggcttatggacatgtcataagttgtttccataagctctcccaaactatctcacaagtgcttatgctagtatataagctcaa 32172787  T
Q  235 ataaa 239  Q
    |||||    
T  32172788 ataaa 32172792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 41052896 - 41052965
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    |||| ||||||||||||| | ||||||||| ||| |||||||||| ||||||||||||||||||| ||||    
T  41052896 agagcttatggaaataagttaaaaatagtttatgaacatgtcataggttgtttctataagctctcccaaa 41052965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 238
Target Start/End: Original strand, 11457161 - 11457236
Alignment:
Q  164 acatgtcataagttgtttctataagctct-cacaaaactctcacaagtgtttatgctaatggataagctcaaataa 238  Q
    ||||||||||||||||||| ||||||||| || || | |||||||||||||| ||| ||| |||||||||||||||    
T  11457161 acatgtcataagttgtttccataagctcttcaaaacagtctcacaagtgtttctgccaatagataagctcaaataa 11457236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 30291154 - 30291204
Alignment:
Q  267 aacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatg 317  Q
    |||||||||||||| ||||||||||| |||||||||||| |||||||||||    
T  30291154 aacttaatttgcagcttatagcataaacacttatcatgataaacgcttatg 30291204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 11297233 - 11297128
Alignment:
Q  134 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctc 232  Q
    ||||| ||||||||||||||||| | ||  ||||||| ||||||||||| |||||||||  |||| | ||| |||||||||||||| | | ||||||||     
T  11297233 ttatgaaaataagctgaaaatagctaattgacatgtcttaagttgtttccataagctctttcaaacagtcttacaagtgtttatgccactagataagctt 11297134  T
Q  233 aaataa 238  Q
    ||||||    
T  11297133 aaataa 11297128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 320 - 372
Target Start/End: Original strand, 42582914 - 42582966
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||||| ||||| ||||||||||||||||||||||| ||||||||| ||||||    
T  42582914 taagctgtttttgtaagctatattggagaacttatgaaaataagctcaaaaca 42582966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 17259236 - 17259351
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaa-aactctcacaagtgtttatgc 218  Q
    ||||| || |||||||||||||||||||| | || || |||||  ||||||| |||||||||| | |||||| | ||| || ||||||||||| |||||     
T  17259236 ctatcttagagagtttatggaaataagcttagaacagctcatggtcatgtcaaaagttgtttccaaaagctcactcaacaagtctcacaagtgcttatgt 17259335  T
Q  219 taatggataagctcaa 234  Q
    || | |||||||||||    
T  17259336 tagtagataagctcaa 17259351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 328 - 370
Target Start/End: Complemental strand, 12857765 - 12857723
Alignment:
Q  328 ttttataagctatattggagaacttatggaaataagcttaaaa 370  Q
    |||||||||||||||||||||||||||| ||||||||| ||||    
T  12857765 ttttataagctatattggagaacttatgaaaataagctgaaaa 12857723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 5963468 - 5963391
Alignment:
Q  258 tggacaaataacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttataa 335  Q
    |||| ||| ||||||||||||| |||||||||||| || ||||||||| || |||||||||  || |||||| |||||    
T  5963468 tggataaacaacttaatttgcaatttatagcataagcatttatcatgataagcgcttatgtacaaactatttctataa 5963391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 25720454 - 25720349
Alignment:
Q  134 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcaca-aaactctcacaagtgtttatgctaatggataagctc 232  Q
    ||||||||||||||| |||  |||| ||| ||||||||| | |||||| ||||||||||| || | | ||||||||||| |||||| | | ||||| |||    
T  25720454 ttatggaaataagctaaaagaagtttatgaacatgtcatgaattgtttttataagctctctcagacagtctcacaagtgcttatgccagtagataacctc 25720355  T
Q  233 aaataa 238  Q
    ||||||    
T  25720354 aaataa 25720349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 372
Target Start/End: Complemental strand, 4014492 - 4014440
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||||| |||| ||||||||| |||||||||||||| ||||||||| ||||||    
T  4014492 taagctgttttcataagctatcttggagaacttatgaaaataagctgaaaaca 4014440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 335
Target Start/End: Complemental strand, 10772055 - 10771987
Alignment:
Q  267 aacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttataa 335  Q
    |||||||||||||| |||||||||||   |||||||||| |||| | ||||| |||||||||| |||||    
T  10772055 aacttaatttgcagcttatagcataagtgcttatcatgataaacacatatgtataagctatttctataa 10771987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 11700420 - 11700356
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 193  Q
    |||||||||| |||||| ||||||| || | ||| ||||||||||||||||||| |||| |||||    
T  11700420 agagtttatgaaaataatctgaaaacagcttatggacatgtcataagttgtttccataaactctc 11700356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 28776874 - 28776934
Alignment:
Q  273 atttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttat 333  Q
    |||||||| ||||||| ||| |||||||||||| ||  |||||||| ||||||||||||||    
T  28776874 atttgcagcttatagcctaagcacttatcatgataagtgcttatgtataagctatttttat 28776934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 6109519 - 6109622
Alignment:
Q  137 tggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaa 235  Q
    ||||||||||||||||| |  | ||| |||| |||||| || |||| ||||||||||  ||| | |||||||||||||||||| ||| || || ||||||    
T  6109519 tggaaataagctgaaaacaacttatggacatatcataatttttttccataagctctccaaaatattctcacaagtgtttatgccaatagacaaactcaaa 6109618  T
Q  236 taaa 239  Q
    ||||    
T  6109619 taaa 6109622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 370
Target Start/End: Original strand, 1130978 - 1131020
Alignment:
Q  328 ttttataagctatattggagaacttatggaaataagcttaaaa 370  Q
    ||||||||||||||||||| |||||||  ||||||||||||||    
T  1130978 ttttataagctatattggaaaacttattaaaataagcttaaaa 1131020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 372
Target Start/End: Original strand, 1899154 - 1899208
Alignment:
Q  318 tgtaagctatttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||||| |||| ||||||| |||| ||||||| ||||||||||||||| ||||||    
T  1899154 tgtaagttattcttataagttatactggagaatttatggaaataagctgaaaaca 1899208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 1899186 - 1899291
Alignment:
Q  133 tttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctc-tcacaaaactctcacaagtgtttatgctaatggataagct 231  Q
    ||||||||||||||||||||| |  | ||| |||||||||||| ||||| | ||||||| ||| || | |||||||  ||||||||||| |  |||||||    
T  1899186 tttatggaaataagctgaaaacaacttatgcacatgtcataagctgttt-tgtaagctcttcaaaacagtctcacatatgtttatgctagtaaataagct 1899284  T
Q  232 caaataa 238  Q
    |||||||    
T  1899285 caaataa 1899291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 238
Target Start/End: Original strand, 2092423 - 2092497
Alignment:
Q  164 acatgtcataagttgtttctataagctctcacaaaactctcacaagtgtttatgctaatggataagctcaaataa 238  Q
    |||||||||||| | |||| ||||  |||||||||| || ||||||| ||||||||| | ||||| |||||||||    
T  2092423 acatgtcataagctatttccataacttctcacaaaagtcccacaagtatttatgctagtagataaactcaaataa 2092497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 37611257 - 37611175
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagt 210  Q
    |||| |||||||||||| ||||||| || | ||| |||||||| |||||||||  |||||||||| |||| | ||||||||||    
T  37611257 agagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaacaatctcacaagt 37611175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 37787987 - 37787905
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagt 210  Q
    |||| |||||||||||| ||||||| || | ||| |||||||| |||||||||  |||||||||| |||| | ||||||||||    
T  37787987 agagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaacaatctcacaagt 37787905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 372
Target Start/End: Original strand, 40590754 - 40590812
Alignment:
Q  314 tatgtgtaagctatttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    ||||| ||||||||||| | ||||||  ||||||| |||||||||||||||| ||||||    
T  40590754 tatgtataagctattttcacaagctaacttggagagcttatggaaataagctcaaaaca 40590812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 335
Target Start/End: Complemental strand, 42573954 - 42573888
Alignment:
Q  269 cttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttataa 335  Q
    |||||||||||| ||||||| | | | |||||||||| || ||||||||| |||||||||| |||||    
T  42573954 cttaatttgcagcttatagcctgagcgcttatcatgataagcgcttatgtataagctatttctataa 42573888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 12242752 - 12242683
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    |||| |||||||| ||||||||||| |  | |||| ||||||||||||| |||| |||||||||| ||||    
T  12242752 agagcttatggaagtaagctgaaaacaactaatgttcatgtcataagttttttccataagctctctcaaa 12242683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 14675086 - 14675009
Alignment:
Q  258 tggacaaataacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttataa 335  Q
    |||||||| |||||||||||||| |||| ||||||  | ||||||||| ||  ||||||||  ||||||||| |||||    
T  14675086 tggacaaacaacttaatttgcagcttatggcataaatagttatcatgataagtgcttatgtagaagctatttctataa 14675009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 19138759 - 19138714
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataa 174  Q
    |||| |||||||||||||||||||| | || |||||||||||||||    
T  19138759 agagcttatggaaataagctgaaaacaatttatgtacatgtcataa 19138714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 334
Target Start/End: Original strand, 39105363 - 39105424
Alignment:
Q  273 atttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttata 334  Q
    |||||||| |||||||||||   |||||||||| || ||||||||| |||||||||| ||||    
T  39105363 atttgcagcttatagcataagtgcttatcatgataagcgcttatgtataagctatttctata 39105424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 42582231 - 42582272
Alignment:
Q  133 tttatggaaataagctgaaaatagttcatgtacatgtcataa 174  Q
    |||||| ||||||||||||||||||| ||| |||||||||||    
T  42582231 tttatgaaaataagctgaaaatagttaatgaacatgtcataa 42582272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 14599372 - 14599304
Alignment:
Q  171 ataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataa 238  Q
    |||||||||||| |||||||||| |||| | ||| |||||||||||||||| |  ||||| ||||||||    
T  14599372 ataagttgtttcgataagctctctcaaacaatcttacaagtgtttatgctagtaaataagttcaaataa 14599304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 216
Target Start/End: Original strand, 19177008 - 19177104
Alignment:
Q  121 tatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttat 216  Q
    |||||||||||  ||||||||||||| | ||||||| | ||| |||||||||  |||||||  || ||||||| |||| | ||| ||||||||||||    
T  19177008 tatcctaaagatcttatggaaataaggtaaaaatagcttatggacatgtcatcggttgttttcattagctctctcaaacaatctgacaagtgtttat 19177104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 156
Target Start/End: Original strand, 29588906 - 29588934
Alignment:
Q  128 aagagtttatggaaataagctgaaaatag 156  Q
    |||||||||||||||||||||||||||||    
T  29588906 aagagtttatggaaataagctgaaaatag 29588934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 355
Target Start/End: Original strand, 32009701 - 32009729
Alignment:
Q  327 tttttataagctatattggagaacttatg 355  Q
    |||||||||||||||||||||||||||||    
T  32009701 tttttataagctatattggagaacttatg 32009729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 372
Target Start/End: Original strand, 34160733 - 34160785
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    ||||||||||| || || ||| |||||||||||||| ||||||||| ||||||    
T  34160733 taagctattttcattagatatcttggagaacttatgaaaataagctgaaaaca 34160785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 173
Target Start/End: Original strand, 36638767 - 36638819
Alignment:
Q  121 tatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcata 173  Q
    ||||||| |||| |||||||||||||||||||| || | ||| ||||||||||    
T  36638767 tatcctagagagcttatggaaataagctgaaaaaagcttatgaacatgtcata 36638819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 37954695 - 37954731
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataag 363  Q
    |||||||||||||||||||||||| |||| |||||||    
T  37954695 tttttataagctatattggagaacatatgaaaataag 37954731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 38728435 - 38728539
Alignment:
Q  134 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctc 232  Q
    |||||||||||||||||||| || | | |  ||||||||||| | |||  |||||||||| |||| | || |||| |||||||| | ||| |||||||||    
T  38728435 ttatggaaataagctgaaaacagcttaggagcatgtcataagctattttcataagctctcccaaacaatcacacaggtgtttataccaatagataagctc 38728534  T
Q  233 aaata 237  Q
    |||||    
T  38728535 aaata 38728539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 335
Target Start/End: Original strand, 41819505 - 41819573
Alignment:
Q  267 aacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttataa 335  Q
    |||||||||| ||| ||||||||||| ||||||||||||  | || || ||| |||||||||| |||||    
T  41819505 aacttaatttacagcttatagcataaacacttatcatgatgagcggttttgtataagctatttctataa 41819573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 363
Target Start/End: Complemental strand, 42500298 - 42500266
Alignment:
Q  331 tataagctatattggagaacttatggaaataag 363  Q
    ||||||||||||||||||||||||| |||||||    
T  42500298 tataagctatattggagaacttatgaaaataag 42500266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 116 - 198
Target Start/End: Complemental strand, 1742087 - 1742005
Alignment:
Q  116 taatctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    ||||||||| | ||||||||||||||||||| |||| |||| | ||| ||||||||||||||||||| |||||||||| ||||    
T  1742087 taatctatcatgaagagtttatggaaataagttgaagatagcttatgcacatgtcataagttgtttccataagctctcccaaa 1742005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 192
Target Start/End: Original strand, 32821828 - 32821900
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctct 192  Q
    ||||||||||||| |||| ||||||| ||||||| || | ||| |||||||||||||||||||||||| ||||    
T  32821828 ctatcctaaagagcttatagaaataaactgaaaacagcttatggacatgtcataagttgtttctataaactct 32821900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 27237935 - 27237876
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataag 188  Q
    |||||||||||||||||||| |||| || | |||||||||||||||| ||||||||||||    
T  27237935 agagtttatggaaataagctaaaaacagcttatgtacatgtcataagctgtttctataag 27237876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 320 - 365
Target Start/End: Complemental strand, 6167351 - 6167306
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagct 365  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||    
T  6167351 taagctgtttttataagctattttggagaacttatggaaataagct 6167306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 9996803 - 9996876
Alignment:
Q  166 atgtcataagttgtttctataagctctcacaa-aactctcacaagtgtttatgctaatggataagctcaaataa 238  Q
    |||||||||||||||||||||||||||| |||  | ||||||||||  |||||||| | |||||||||||||||    
T  9996803 atgtcataagttgtttctataagctctcccaagcagtctcacaagtacttatgctagttgataagctcaaataa 9996876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 34652078 - 34652017
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagct 190  Q
    |||| ||||||||||||| |||||| || | ||| |||||||||||||||||||||||||||    
T  34652078 agagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtttctataagct 34652017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 43065492 - 43065424
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaa 197  Q
    |||| |||| ||||||||||||||| | || ||| ||||||||||||||||||  ||||||||||||||    
T  43065492 agagcttattgaaataagctgaaaacaatttatggacatgtcataagttgttttcataagctctcacaa 43065424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 9595291 - 9595338
Alignment:
Q  134 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgttt 181  Q
    ||||| ||||||||||||||||||||||| |||||||||||| |||||    
T  9595291 ttatgaaaataagctgaaaatagttcatggacatgtcataagatgttt 9595338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 15120222 - 15120321
Alignment:
Q  140 aaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataa 238  Q
    ||||||||| |||| || | ||| ||||||||||||||||||| |||||||||| |||| |   |||||| ||||||||||| | |||||| ||||||||    
T  15120222 aaataagcttaaaacagctaatgaacatgtcataagttgtttccataagctctcccaaacagattcacaactgtttatgctagtagataagttcaaataa 15120321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 30331762 - 30331804
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataa 362  Q
    ||||||||||||||||| |||||||||||||||||| ||||||    
T  30331762 taagctatttttataagatatattggagaacttatgaaaataa 30331804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 41042064 - 41042006
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataa 187  Q
    |||||||||||||||||| |||||| || | ||| |||||| |||||||||||||||||    
T  41042064 agagtttatggaaataagttgaaaacagctgatggacatgtaataagttgtttctataa 41042006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 15967718 - 15967755
Alignment:
Q  150 aaaatagttcatgtacatgtcataagttgtttctataa 187  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  15967718 aaaatagttcatgaacatgtcataagttgtttctataa 15967755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 218
Target Start/End: Complemental strand, 41809282 - 41809197
Alignment:
Q  134 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaa-aactctcacaagtgtttatgc 218  Q
    ||||||||||||||| |||| |  | ||| ||||||||||||||||||| | ||||||| ||||  | ||||||||||||||||||    
T  41809282 ttatggaaataagctaaaaacaacttatgaacatgtcataagttgtttccacaagctcttacaatcagtctcacaagtgtttatgc 41809197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 372
Target Start/End: Original strand, 41817165 - 41817222
Alignment:
Q  315 atgtgtaagctatttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||||||||||||||| |||| ||||  |||||| |||||||||||||||| ||||||    
T  41817165 atgtgtaagctattttcataaactatcctggagagcttatggaaataagctgaaaaca 41817222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 372
Target Start/End: Complemental strand, 3078708 - 3078656
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||||| |||||||||||||| ||||||| ||| |||||||||||| ||||||    
T  3078708 taagctgtttttataagctatcttggagagcttctggaaataagctaaaaaca 3078656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 372
Target Start/End: Original strand, 16398116 - 16398168
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    ||||||||||| ||||| ||| |||||||||||||| ||||||||| ||||||    
T  16398116 taagctattttcataagttatgttggagaacttatgaaaataagctgaaaaca 16398168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 18884900 - 18884964
Alignment:
Q  134 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    |||||||||||| ||||||| || | ||| | |||||||||| ||||||||||||||||| ||||    
T  18884900 ttatggaaataatctgaaaacagctaatggaaatgtcataagctgtttctataagctctcccaaa 18884964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 31228879 - 31228791
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttat 216  Q
    ||||||||||||||||| || |||| || | || |||||||||||| ||||||  |||||| ||| |||| | ||||||||||||||||    
T  31228879 agagtttatggaaataacctaaaaacagcttatatacatgtcataaattgtttgaataagcactcccaaacagtctcacaagtgtttat 31228791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 787363 - 787450
Alignment:
Q  132 gtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgc 218  Q
    ||||||||| |||||||||||| || | ||| |||||||||||| |||||  ||||| ||||||||| | | ||||||||| ||||||    
T  787363 gtttatggagataagctgaaaacagcttatggacatgtcataagctgttttcataagttctcacaaacagtgtcacaagtgcttatgc 787450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 5781688 - 5781743
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataag 175  Q
    ||||| || |||| |||||||||||||||||||| |||| ||| ||||||||||||    
T  5781688 ctatcatagagagcttatggaaataagctgaaaacagtttatgcacatgtcataag 5781743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 30538204 - 30538153
Alignment:
Q  140 aaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctc 191  Q
    |||||||||||||| |  | ||| ||||||||||||||||||||||||||||    
T  30538204 aaataagctgaaaacaacttatggacatgtcataagttgtttctataagctc 30538153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 135 - 217
Target Start/End: Complemental strand, 43456743 - 43456660
Alignment:
Q  135 tatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatg 217  Q
    ||||||||||||||||||| |||| ||| ||||||||| ||||||||  | |||||||  |||| | ||| |||||||||||||    
T  43456743 tatggaaataagctgaaaacagtttatggacatgtcatgagttgttttcacaagctctttcaaacagtcttacaagtgtttatg 43456660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 199
Target Start/End: Complemental strand, 2410087 - 2410018
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaaa 199  Q
    |||| ||||||||||||||||||||||| | ||| ||||| ||||||| ||||| || || ||||||||||    
T  2410087 agagcttatggaaataagctgaaaatagct-atgaacatgccataagtggtttccattagttctcacaaaa 2410018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 5133800 - 5133858
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataa 187  Q
    |||| ||||||||||||||||||| ||| | |||  ||||||||||||||||| |||||    
T  5133800 agagcttatggaaataagctgaaagtagcttatgaccatgtcataagttgtttttataa 5133858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 329
Target Start/End: Original strand, 9833048 - 9833110
Alignment:
Q  267 aacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctattt 329  Q
    |||||||||| ||| ||||||||||| || ||||||||| |||| ||||||| ||| ||||||    
T  9833048 aacttaatttacagcttatagcataagcatttatcatgataaacacttatgtataatctattt 9833110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 370
Target Start/End: Complemental strand, 12464541 - 12464491
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagcttaaaa 370  Q
    ||||||||||| ||||||||| ||||||||||| || ||||||||| ||||    
T  12464541 taagctattttcataagctatcttggagaacttgtgaaaataagctgaaaa 12464491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 14302923 - 14302961
Alignment:
Q  201 tctcacaagtgtttatgctaatggataagctcaaataaa 239  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  14302923 tctcacaaatgtttatgctaatagataagctcaaataaa 14302961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 370
Target Start/End: Complemental strand, 22971550 - 22971508
Alignment:
Q  328 ttttataagctatattggagaacttatggaaataagcttaaaa 370  Q
    ||||||||||||||||||| |||||||  ||||||||||||||    
T  22971550 ttttataagctatattggaaaacttattaaaataagcttaaaa 22971508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 24098130 - 24098231
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaaactctcacaagtgtttatgctaatggataa 228  Q
    |||| |||||||||||||||||||| |||| |||  ||||| || | |||||||| |||||||||| || | | | ||||||| |||||||| | |||||    
T  24098130 agagcttatggaaataagctgaaaacagtttatgggcatgttattaattgtttctgtaagctctca-aatagttttacaagtgcttatgctactagataa 24098228  T
Q  229 gct 231  Q
    |||    
T  24098229 gct 24098231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 370
Target Start/End: Complemental strand, 29316843 - 29316793
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagcttaaaa 370  Q
    |||||| |||| || |||||| |||||||||||||||||||||||| ||||    
T  29316843 taagctgttttcatcagctatcttggagaacttatggaaataagctgaaaa 29316793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 1741569 - 1741532
Alignment:
Q  116 taatctatcctaaagagtttatggaaataagctgaaaa 153  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  1741569 taatttatcctgaagagtttatggaaataagctgaaaa 1741532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 29429808 - 29429711
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttat 216  Q
    |||||||||| |  ||||| ||||| |||||||| || |  || | ||||||| |||||||||||||||||||| |||| | ||||||||||| ||||    
T  29429808 ctatcctaaataagttatgaaaatatgctgaaaacagctagtgaatatgtcattagttgtttctataagctctcccaaacagtctcacaagtgcttat 29429711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 35555155 - 35555224
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    |||||| ||||||||||||||||||||||| |||  ||||| ||||  |||||  |||||||||| ||||    
T  35555155 agagttgatggaaataagctgaaaatagtttatgatcatgtaataatctgttttcataagctctctcaaa 35555224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 38388719 - 38388784
Alignment:
Q  134 ttatggaaataagctgaaaat-agttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    ||||||||||||||||||||  |||| ||| ||||||||||||||||| | ||||| |||| ||||    
T  38388719 ttatggaaataagctgaaaaacagtttatgaacatgtcataagttgttaccataagttctcccaaa 38388784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 40279276 - 40279321
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||| |||||||||||||||||||||||| |||| |||| ||||||    
T  40279276 ttttcataagctatattggagaacttatgaaaattagctgaaaaca 40279321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 40279346 - 40279391
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||| |||||||||||||||||||||||| |||| |||| ||||||    
T  40279346 ttttcataagctatattggagaacttatgaaaattagctgaaaaca 40279391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 40279416 - 40279461
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||| |||||||||||||||||||||||| ||||||| | ||||||    
T  40279416 ttttcataagctatattggagaacttatgaaaataagttgaaaaca 40279461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 43173231 - 43173276
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||||||| ||||| ||||||| |||||||||||||| ||||||||    
T  43173231 tttttataggctatcttggagatcttatggaaataagtttaaaaca 43173276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 372
Target Start/End: Original strand, 680505 - 680557
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    ||||||||||| ||||||||| ||| ||||||| || ||||||||| ||||||    
T  680505 taagctattttcataagctatcttgaagaacttgtgaaaataagctgaaaaca 680557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 750684 - 750724
Alignment:
Q  332 ataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    ||||||||| |||||||||||||| ||||||||| ||||||    
T  750684 ataagctatcttggagaacttatgcaaataagctcaaaaca 750724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 4550796 - 4550844
Alignment:
Q  150 aaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    ||||||| | ||| ||||||||||||||||||| |||||||||| ||||    
T  4550796 aaaatagcttatgaacatgtcataagttgtttccataagctctcccaaa 4550844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 10198535 - 10198479
Alignment:
Q  116 taatctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcat 172  Q
    |||||||||||| |||| ||||||||||||||||| || || | ||| |||||||||    
T  10198535 taatctatcctagagagattatggaaataagctgacaacagcttatgaacatgtcat 10198479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 20952364 - 20952400
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataag 363  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  20952364 tttttattagctatattggagaacttatgaaaataag 20952400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 22878164 - 22878236
Alignment:
Q  167 tgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataa 238  Q
    |||||||| ||||||| ||||| |||| |||| | ||||||||||| |||||  | |||||||||||||||||    
T  22878164 tgtcataatttgtttccataaggtctcccaaacagtctcacaagtgcttatgtcagtggataagctcaaataa 22878236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 26143710 - 26143658
Alignment:
Q  318 tgtaagctatttttataagctatattggagaacttatggaaataagcttaaaa 370  Q
    |||||||| |||| ||||||||  |||||||||||||| ||||||||| ||||    
T  26143710 tgtaagctgttttcataagctaacttggagaacttatgaaaataagctgaaaa 26143658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 26202037 - 26202073
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataag 363  Q
    |||||||||| |||||||||||||||||| |||||||    
T  26202037 tttttataagatatattggagaacttatgaaaataag 26202073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 27695663 - 27695619
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagc 364  Q
    |||||| ||||||||||||||||||| |||||| || ||||||||    
T  27695663 taagctgtttttataagctatattggggaacttgtgaaaataagc 27695619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 31740014 - 31739954
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagc 189  Q
    |||| |||||||||||| ||||||| || | |||  |||||||| ||||||||||||||||    
T  31740014 agagcttatggaaataatctgaaaacagcttatgatcatgtcatgagttgtttctataagc 31739954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 32592595 - 32592631
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataag 363  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  32592595 tttttataagcaatattggagaacttatgaaaataag 32592631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 33256774 - 33256838
Alignment:
Q  135 tatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaaa 199  Q
    |||| ||||||||||| || |||| ||| |||||||||||| |||||  |||||||||| |||||    
T  33256774 tatgaaaataagctgagaacagtttatgaacatgtcataagctgttttcataagctctcccaaaa 33256838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 36852500 - 36852548
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagtt 177  Q
    |||| |||||||||||| |||||||||||| ||  ||||||||||||||    
T  36852500 agagcttatggaaataatctgaaaatagtttatagacatgtcataagtt 36852548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 37186354 - 37186294
Alignment:
Q  133 tttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 193  Q
    |||| ||||||| |||||||| || |||   |||||||||||||||||||||||| |||||    
T  37186354 tttacggaaatatgctgaaaacagctcacagacatgtcataagttgtttctataatctctc 37186294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 332 - 364
Target Start/End: Original strand, 40835542 - 40835574
Alignment:
Q  332 ataagctatattggagaacttatggaaataagc 364  Q
    |||||||||||||||||||||||| ||||||||    
T  40835542 ataagctatattggagaacttatgaaaataagc 40835574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 43279590 - 43279554
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataag 363  Q
    |||||||||||||||||||||||||| || |||||||    
T  43279590 tttttataagctatattggagaacttgtgaaaataag 43279554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 4e-17; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 122 - 238
Target Start/End: Original strand, 11264322 - 11264439
Alignment:
Q  122 atcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgcta 220  Q
    |||||| |||| ||||||||||||| |||||| |||| ||| ||||||||||||||| ||||||| |||||| |||| | |||||||  |||||||||||    
T  11264322 atcctagagagcttatggaaataagttgaaaacagtttatggacatgtcataagttgattctatatgctctcccaaacagtctcacagatgtttatgcta 11264421  T
Q  221 atggataagctcaaataa 238  Q
     | ||||  |||||||||    
T  11264422 gtagatagactcaaataa 11264439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 198
Target Start/End: Complemental strand, 6987792 - 6987714
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    |||||||  |||| ||||||||||||| ||||||||||| ||| |||||||||||||||| || |||||||||| ||||    
T  6987792 ctatcctggagagcttatggaaataagttgaaaatagtttatggacatgtcataagttgtatccataagctctcccaaa 6987714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 198
Target Start/End: Original strand, 10812539 - 10812605
Alignment:
Q  132 gtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    |||| ||||||||||||||||| |||||||||||||| || |||||||||| |||||||||| ||||    
T  10812539 gtttttggaaataagctgaaaacagttcatgtacatgacaaaagttgtttccataagctctctcaaa 10812605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 29467675 - 29467605
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagct 190  Q
    |||||||| ||||||||||||||||||||||||| || | ||| ||||||||||||  |||||||||||||    
T  29467675 ctatcctagagagtttatggaaataagctgaaaacagcttatggacatgtcataagccgtttctataagct 29467605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 120 - 238
Target Start/End: Complemental strand, 24371004 - 24370883
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatg--tacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttat 216  Q
    |||||||||| ||||||| |||||||||||||||  | | |||  |||||||||||||||||||| ||||| | |  |||| | ||||||| ||| ||||    
T  24371004 ctatcctaaatagtttatagaaataagctgaaaacggcttatgtatacatgtcataagttgtttccataagttttatcaaacattctcacatgtgcttat 24370905  T
Q  217 gctaatggataagctcaaataa 238  Q
    || ||| |||||||||||||||    
T  24370904 gcgaatagataagctcaaataa 24370883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 244
Target Start/End: Complemental strand, 19394814 - 19394689
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgc 218  Q
    |||| ||| |||| |||||||||||||||| |   || | |||||||||| ||||||||||||||||||||||  |||| | |||||||||||||| |||    
T  19394814 ctatactagagagcttatggaaataagctgtattcagcttatgtacatgtaataagttgtttctataagctctggcaaacagtctcacaagtgtttttgc 19394715  T
Q  219 taatggataagctcaaataaaacaat 244  Q
    |  | | ||| |||||||||| ||||    
T  19394714 tcgtagttaaactcaaataaatcaat 19394689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 27123359 - 27123284
Alignment:
Q  164 acatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataa 238  Q
    ||||||||||||||||||| |||||||||| |||| | ||||||||||  |||||||| |  ||||||||||||||    
T  27123359 acatgtcataagttgtttccataagctctctcaaacagtctcacaagtacttatgctagtttataagctcaaataa 27123284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 188
Target Start/End: Complemental strand, 2874661 - 2874607
Alignment:
Q  134 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataag 188  Q
    |||||||||||||| |||||||| | ||| ||||||||||||||||||| |||||    
T  2874661 ttatggaaataagcggaaaatagattatggacatgtcataagttgtttccataag 2874607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 238
Target Start/End: Complemental strand, 3637416 - 3637310
Alignment:
Q  138 ggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actc-----tcacaagtgtttatgctaatggataagct 231  Q
    |||||||||||||||| |||| ||| | |||||| ||||||||| |||  |||||||||||  |||     ||| |||||||||||||||| ||||||||    
T  3637416 ggaaataagctgaaaacagtttatgaatatgtcacaagttgtttttattcgctctcacaaagtctcataagtcataagtgtttatgctaatagataagct 3637317  T
Q  232 caaataa 238  Q
    |||||||    
T  3637316 caaataa 3637310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 6979011 - 6978945
Alignment:
Q  122 atcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataag 188  Q
    ||||||||||||||||| |||||||||||||| || | ||  |||||||||||||| |||| |||||    
T  6979011 atcctaaagagtttatgaaaataagctgaaaacagcttatagacatgtcataagttatttcaataag 6978945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 117 - 198
Target Start/End: Original strand, 27725230 - 27725311
Alignment:
Q  117 aatctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    |||||||| | ||| | |||||||||| |  ||||||||||| ||| |||||||||||||| |||| |||||||||| ||||    
T  27725230 aatctatcttgaagtgcttatggaaatcatttgaaaatagtttatggacatgtcataagttatttccataagctctctcaaa 27725311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 193
Target Start/End: Original strand, 28406939 - 28407004
Alignment:
Q  128 aagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 193  Q
    ||||| |||||||||||||||| |||||||| ||| | ||||||| |||||||||  |||||||||    
T  28406939 aagagcttatggaaataagctgcaaatagtttatgaatatgtcatgagttgtttccgtaagctctc 28407004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 50298415 - 50298480
Alignment:
Q  258 tggacaaataacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaag 323  Q
    |||| ||| ||||||||||| || ||||||||||| |||||||||||| ||| |||||||| ||||    
T  50298415 tggataaacaacttaatttgaagcttatagcataaacacttatcatgataaatgcttatgtataag 50298480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 1312869 - 1312921
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgttt 181  Q
    ||||||||||||||||||||||||| |||| ||| | |||| |||||||||||    
T  1312869 agagtttatggaaataagctgaaaacagtttatgaatatgtaataagttgttt 1312921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 372
Target Start/End: Complemental strand, 17975437 - 17975385
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||||| |||||||||||||| ||||||| ||| |||||||||||| ||||||    
T  17975437 taagctgtttttataagctatcttggagagcttctggaaataagctaaaaaca 17975385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 192
Target Start/End: Original strand, 21157787 - 21157859
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctct 192  Q
    ||||||| ||||| ||||||||||||||| |||| || |  |||| |||||||||| ||||||| ||||||||    
T  21157787 ctatcctgaagagcttatggaaataagctaaaaacagcttttgtaaatgtcataagctgtttctgtaagctct 21157859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 45128347 - 45128283
Alignment:
Q  134 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    |||||||||||||||||||| || ||||| |||||  || ||||||||| |||||||||| ||||    
T  45128347 ttatggaaataagctgaaaacagctcatggacatgatatcagttgtttccataagctctctcaaa 45128283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 362
Target Start/End: Complemental strand, 26925 - 26890
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataa 362  Q
    ||||||||||||||||||||||||||||| ||||||    
T  26925 tttttataagctatattggagaacttatgaaaataa 26890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 362
Target Start/End: Original strand, 9760449 - 9760484
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataa 362  Q
    ||||||||||||||||||||||||||||| ||||||    
T  9760449 tttttataagctatattggagaacttatgaaaataa 9760484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 41097285 - 41097234
Alignment:
Q  142 ataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 193  Q
    ||||| ||||||||| | ||| ||||||||| ||||||||||||||||||||    
T  41097285 ataagttgaaaatagcttatggacatgtcattagttgtttctataagctctc 41097234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 198
Target Start/End: Complemental strand, 7749098 - 7749064
Alignment:
Q  164 acatgtcataagttgtttctataagctctcacaaa 198  Q
    ||||||||||||||||||| |||||||||||||||    
T  7749098 acatgtcataagttgtttccataagctctcacaaa 7749064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 120 - 198
Target Start/End: Original strand, 21952967 - 21953045
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    |||||||| |||| ||| |||||||| || |||| || | ||| |||||||||||||| |||| |||||||||| ||||    
T  21952967 ctatcctatagagcttaaggaaataaactaaaaacaggttatggacatgtcataagttctttccataagctctcccaaa 21953045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 25896819 - 25896922
Alignment:
Q  140 aaataagctgaaaatagttcatgta----catgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaa 234  Q
    |||||||||||||| |||| |||||    ||||||||||| | |||||||||||||||  ||| | ||||||||||| | |||||| | ||||| |||||    
T  25896819 aaataagctgaaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaa 25896918  T
Q  235 ataa 238  Q
    ||||    
T  25896919 ataa 25896922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 372
Target Start/End: Complemental strand, 825551 - 825506
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||| ||||||||| |||||||||||||| ||||||||| ||||||    
T  825551 ttttcataagctattttggagaacttatgaaaataagctgaaaaca 825506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 372
Target Start/End: Complemental strand, 2592366 - 2592325
Alignment:
Q  331 tataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||||||||| ||||||| |||||||||||||||| ||||||    
T  2592366 tataagctattttggagagcttatggaaataagctgaaaaca 2592325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 6466097 - 6466036
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgttt 181  Q
    |||| ||| |||| ||||||||||||| ||||||||| | ||| |||| |||||||||||||    
T  6466097 ctattctagagagattatggaaataagttgaaaatagcttatgaacatctcataagttgttt 6466036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 18628555 - 18628486
Alignment:
Q  169 tcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaata 237  Q
    |||||||||||||  |||||||||| |||| | |||||||||||||||||  | | ||||||||||||||    
T  18628555 tcataagttgttttcataagctctcccaaacagtctcacaagtgtttatgtcagtagataagctcaaata 18628486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 237
Target Start/End: Complemental strand, 21593045 - 21592941
Alignment:
Q  132 gtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaaactctcacaagtgtttatgctaatggataagct 231  Q
    |||||||||||||||||||||  || | ||  |||||||||||| || ||| |||||||||| ||||| ||| |||| ||| | | ||| | ||||||||    
T  21593045 gtttatggaaataagctgaaagcagcttataaacatgtcataagctgcttcaataagctctcccaaaa-tcttacaaatgtatgtactagtagataagct 21592947  T
Q  232 caaata 237  Q
    ||||||    
T  21592946 caaata 21592941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 23676706 - 23676751
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    ||||||||||||||| | || | |||||||||||||||||||||||    
T  23676706 tttttataagctatacttgaaagcttatggaaataagcttaaaaca 23676751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 244
Target Start/End: Original strand, 44319968 - 44320093
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgc 218  Q
    |||||||| |||  ||||| |||| || ||||||||| | ||| | |  |||||| ||||||  |||||||||| |||| | |||||||| |||||||||    
T  44319968 ctatcctagagaacttatgaaaattagttgaaaatagctaatggatacatcataatttgttttcataagctctcccaaacagtctcacaattgtttatgc 44320067  T
Q  219 taatggataagctcaaataaaacaat 244  Q
     ||| | |||||||||||||| ||||    
T  44320068 caataggtaagctcaaataaaccaat 44320093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 363
Target Start/End: Original strand, 2244064 - 2244096
Alignment:
Q  331 tataagctatattggagaacttatggaaataag 363  Q
    ||||||||||||||||||||||||| |||||||    
T  2244064 tataagctatattggagaacttatgaaaataag 2244096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 2841657 - 2841765
Alignment:
Q  132 gtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagc 230  Q
    ||||||||| |||||||||||| |  | ||  ||||||||||||||| ||  |||| ||||| |||| | |||||| ||| ||||||  ||||||||| |    
T  2841657 gtttatggatataagctgaaaacaacttattgacatgtcataagttgctttcataaactctcgcaaacaatctcacgagtttttatgtcaatggataaac 2841756  T
Q  231 tcaaataaa 239  Q
    |||||||||    
T  2841757 tcaaataaa 2841765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 2996607 - 2996711
Alignment:
Q  135 tatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctca 233  Q
    |||| ||||||| |||||| || | ||| ||||||||||||||||||  |||||||||| |||| | ||||| ||||| |||||  |||  ||||| |||    
T  2996607 tatgaaaataagttgaaaaaagcttatggacatgtcataagttgttttcataagctctctcaaacagtctcaaaagtgcttatgtcaataaataagttca 2996706  T
Q  234 aataa 238  Q
    |||||    
T  2996707 aataa 2996711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 372
Target Start/End: Original strand, 6364151 - 6364203
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    ||||| ||||| |||||||||| ||||||||||| | ||||||||| ||||||    
T  6364151 taagcaattttcataagctataatggagaacttacgaaaataagctgaaaaca 6364203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 14011248 - 14011288
Alignment:
Q  332 ataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    ||||||||| ||||||| |||||||||||||||| ||||||    
T  14011248 ataagctatcttggagagcttatggaaataagctgaaaaca 14011288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 335
Target Start/End: Complemental strand, 17751299 - 17751231
Alignment:
Q  267 aacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttataa 335  Q
    ||||||| |||||| ||||||||||| ||||| | |||| || ||||||| | |||||||||| |||||    
T  17751299 aacttaaattgcagcttatagcataagcacttgtaatgataagcgcttatttataagctatttctataa 17751231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 326
Target Start/End: Complemental strand, 22539232 - 22539165
Alignment:
Q  258 tggacaaataacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagcta 326  Q
    |||| |||||||||| ||||||| ||||||||||| | |||||||||| || || |||||| |||||||    
T  22539232 tggataaataactta-tttgcaggttatagcataagcccttatcatgacaagcgtttatgtataagcta 22539165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 192
Target Start/End: Complemental strand, 28614859 - 28614787
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctct 192  Q
    |||||||| |||  ||||| |||||||||||||| || | ||| | ||||||||| ||||||| |||||||||    
T  28614859 ctatcctagagaacttatgaaaataagctgaaaagagcttatggatatgtcataaattgtttccataagctct 28614787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 33587016 - 33586980
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataag 363  Q
    |||||||||||||||| |||||||||||| |||||||    
T  33587016 tttttataagctatatcggagaacttatgaaaataag 33586980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 46588134 - 46588098
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataag 363  Q
    |||||||||| |||||||||||||||||| |||||||    
T  46588134 tttttataagttatattggagaacttatgaaaataag 46588098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 46592270 - 46592234
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataag 363  Q
    |||||||||| |||||||||||||||||| |||||||    
T  46592270 tttttataagttatattggagaacttatgaaaataag 46592234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 49032087 - 49032031
Alignment:
Q  134 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagct 190  Q
    ||||||||||||| |||||| |  | ||| |||||||||||| ||||||||||||||    
T  49032087 ttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagct 49032031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 49940237 - 49940193
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagc 364  Q
    |||||| ||||||||||||| || |||||||||| ||||||||||    
T  49940237 taagctgtttttataagctacatcggagaacttacggaaataagc 49940193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 372
Target Start/End: Original strand, 51630113 - 51630165
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    ||||||||||| ||||||||| ||| |||| ||||| ||||||||| ||||||    
T  51630113 taagctattttcataagctatcttgaagaatttatgaaaataagctgaaaaca 51630165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 6e-16; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 132 - 238
Target Start/End: Complemental strand, 30191180 - 30191073
Alignment:
Q  132 gtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagc 230  Q
    |||||||||||||||||||||| |  |  || ||||||||||||||||||| |||||||||| |||| | ||| ||||||| |||||| ||| ||||| |    
T  30191180 gtttatggaaataagctgaaaacaagttttgaacatgtcataagttgtttccataagctctcccaaacagtctaacaagtgcttatgccaatagataaac 30191081  T
Q  231 tcaaataa 238  Q
    ||||||||    
T  30191080 tcaaataa 30191073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 238
Target Start/End: Original strand, 6950342 - 6950460
Alignment:
Q  121 tatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgct 219  Q
    |||||||||||| |||||||||||||||||||| |  | ||  |||||||||| |||||||  |||||||||| |||| | |||||||| |||||||||     
T  6950342 tatcctaaagagcttatggaaataagctgaaaacaacttatcgacatgtcataggttgtttacataagctctcccaaacaatctcacaaatgtttatgcc 6950441  T
Q  220 aatggataagctcaaataa 238  Q
    | | ||||| |||||||||    
T  6950442 agtagataaactcaaataa 6950460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 14949885 - 14949984
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgc 218  Q
    ||||||||||||| |||| ||||||||||||||| || | ||| |||||||||||||| |||  ||||||||||  ||| | |||||||| |||||||||    
T  14949885 ctatcctaaagagattatagaaataagctgaaaacagcttatggacatgtcataagttattttcataagctctcctaaacagtctcacaaatgtttatgc 14949984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 129 - 238
Target Start/End: Original strand, 9700029 - 9700139
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggata 227  Q
    |||| ||||| ||||||| |||||| || | ||| ||||||||||| ||| ||  | |||||||| |||| | |||||||||||||||||||| | ||||    
T  9700029 agagcttatgaaaataaggtgaaaacagcttatggacatgtcataaattgatttcacaagctctctcaaatagtctcacaagtgtttatgctagtagata 9700128  T
Q  228 agctcaaataa 238  Q
    |||||||||||    
T  9700129 agctcaaataa 9700139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 37740462 - 37740405
Alignment:
Q  135 tatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 193  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||| |||| |||||    
T  37740462 tatggaaataagctgaaaatagtt-atggacatgtcataagttgtttccataaactctc 37740405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 4055658 - 4055589
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    |||| ||| |||||||||||||||| |||| ||| |||||||||||||| ||||||||| ||||| ||||    
T  4055658 agagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaa 4055589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 8558688 - 8558757
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    |||| ||||| |||||| |||||||||||| ||| |||||||| |||||||||| |||||||||| ||||    
T  8558688 agagcttatgaaaataatctgaaaatagttgatggacatgtcacaagttgtttccataagctctcccaaa 8558757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 43504760 - 43504805
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||    
T  43504760 tttttataagctatcttggagaacttatggaaataagctgaaaaca 43504805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 7008632 - 7008736
Alignment:
Q  134 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaaactctcacaagtgtttatgctaatggataagctca 233  Q
    ||||| ||||||||| ||||||  | | | |||||||||| ||||||||||||||||||| | ||  ||||||||||| |||||| | | ||||| ||||    
T  7008632 ttatgaaaataagctaaaaatatcttaaggacatgtcataggttgtttctataagctctctctaacgtctcacaagtgcttatgccagtagataaactca 7008731  T
Q  234 aataa 238  Q
    |||||    
T  7008732 aataa 7008736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 123 - 238
Target Start/End: Complemental strand, 43368748 - 43368632
Alignment:
Q  123 tcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaa-aactctcacaagtgtttatgctaa 221  Q
    |||||||||||| ||| ||||||| ||||||||| | ||| ||||||||||||||||||  ||||||| | ||||  | |||||||| || ||||| ||     
T  43368748 tcctaaagagttcatgaaaataagttgaaaatagctaatgaacatgtcataagttgttttcataagctgttacaaccagtctcacaaatgcttatgttag 43368649  T
Q  222 tggataagctcaaataa 238  Q
    | |||||| ||||||||    
T  43368648 tagataagatcaaataa 43368632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 43704426 - 43704363
Alignment:
Q  121 tatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttcta 184  Q
    |||||| || || ||||||||||||||| |||| |||| ||| |||||||||||||||||||||    
T  43704426 tatcctcaaaagcttatggaaataagcttaaaacagtttatgaacatgtcataagttgtttcta 43704363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 198
Target Start/End: Complemental strand, 6509354 - 6509276
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    |||||||  |||| |||| |||||||| ||||||||||| ||   ||||||||||| ||||||||||||||||| ||||    
T  6509354 ctatcctggagagcttattgaaataaggtgaaaatagtttataggcatgtcataagctgtttctataagctctctcaaa 6509276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 31875651 - 31875545
Alignment:
Q  115 ttaatctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtt 213  Q
    |||| ||||| | ||||| ||||| ||||||| ||||||| | | ||| ||||||||||||||||||| ||||||| || |||| | | |||| ||||||    
T  31875651 ttaaactatcttcaagagcttatgaaaataagttgaaaatggcttatggacatgtcataagttgtttccataagctttctcaaacagtgtcactagtgtt 31875552  T
Q  214 tatgcta 220  Q
    |||||||    
T  31875551 tatgcta 31875545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 24258085 - 24258146
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgttt 181  Q
    ||||||||||||||||||| ||||||||| ||||||    ||||||||||||||| ||||||    
T  24258085 ctatcctaaagagtttatgtaaataagcttaaaataacctatgtacatgtcataaattgttt 24258146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 234
Target Start/End: Original strand, 44401594 - 44401694
Alignment:
Q  134 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctc 232  Q
    |||||||||||||||||||| | |  ||| ||||||| |||||||||||||||| || || |||| | |||||||||||| ||||| | | |||||||||    
T  44401594 ttatggaaataagctgaaaacaatgtatgaacatgtc-taagttgtttctataaactatcccaaacagtctcacaagtgtatatgccagtagataagctc 44401692  T
Q  233 aa 234  Q
    ||    
T  44401693 aa 44401694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 244
Target Start/End: Original strand, 2091831 - 2091907
Alignment:
Q  169 tcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataaaacaat 244  Q
    ||||||||||||| | | ||||||| |||| | |||||||||||||||||| | |||||||| ||||||||| ||||    
T  2091831 tcataagttgtttttgtgagctctctcaaacaatctcacaagtgtttatgccattggataagatcaaataaatcaat 2091907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 11183573 - 11183637
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 193  Q
    |||| |||||||||||||||||||| || | ||  |||| ||||||||||||| |||||||||||    
T  11183573 agagcttatggaaataagctgaaaacagcttatagacatatcataagttgtttttataagctctc 11183637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 11569488 - 11569409
Alignment:
Q  140 aaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgc 218  Q
    |||||||||||||| |  | |||||||||||||||| |||||| ||||||||||  ||| | ||||||||||| ||||||    
T  11569488 aaataagctgaaaacaacttatgtacatgtcataagctgtttccataagctctcttaaacagtctcacaagtggttatgc 11569409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 362
Target Start/End: Complemental strand, 30657833 - 30657798
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataa 362  Q
    ||||||||||||||||||||||||||||| ||||||    
T  30657833 tttttataagctatattggagaacttatgaaaataa 30657798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 37444586 - 37444531
Alignment:
Q  273 atttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatt 328  Q
    |||||||| ||| ||||||| |||||||||||| || ||||||||| |||||||||    
T  37444586 atttgcaggttaaagcataagcacttatcatgataagcgcttatgtataagctatt 37444531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 370
Target Start/End: Original strand, 18133666 - 18133708
Alignment:
Q  328 ttttataagctatattggagaacttatggaaataagcttaaaa 370  Q
    |||||||| ||||||||||||||||||| ||||||||| ||||    
T  18133666 ttttataaactatattggagaacttatgaaaataagctgaaaa 18133708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 39049335 - 39049405
Alignment:
Q  164 acatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctca 233  Q
    |||||| |||||||||||  ||||||| ||||||| | |||||||| ||||||||||| | ||||||||||    
T  39049335 acatgttataagttgttttcataagctttcacaaacaatctcacaaatgtttatgctagtagataagctca 39049405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 43393778 - 43393704
Alignment:
Q  165 catgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataa 238  Q
    ||||||||||||||| ||||||||||||| |||| | ||||| |||||||| ||| | | |||||||| ||||||    
T  43393778 catgtcataagttgtatctataagctctcccaaacagtctcaaaagtgtttttgcaagtagataagcttaaataa 43393704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 3254244 - 3254305
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgttt 181  Q
    |||||||| ||||| ||| ||||||||||||||| || | ||| |||||||||||| |||||    
T  3254244 ctatcctatagagtgtatagaaataagctgaaaacagcttatgaacatgtcataagctgttt 3254305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 372
Target Start/End: Complemental strand, 3537002 - 3536961
Alignment:
Q  331 tataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||||| ||| |||||||||||||||||||||||| ||||||    
T  3537002 tataagatatcttggagaacttatggaaataagctgaaaaca 3536961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 335
Target Start/End: Original strand, 8216788 - 8216841
Alignment:
Q  282 ttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttataa 335  Q
    ||||||||||| |||||||||||| |||| ||||||| ||||| |||| |||||    
T  8216788 ttatagcataaacacttatcatgataaacacttatgtataagccatttatataa 8216841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 173
Target Start/End: Original strand, 11121802 - 11121847
Alignment:
Q  128 aagagtttatggaaataagctgaaaatagttcatgtacatgtcata 173  Q
    ||||||||||||||||||||||||||||| | |||  |||||||||    
T  11121802 aagagtttatggaaataagctgaaaatagataatgatcatgtcata 11121847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 11415173 - 11415246
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 193  Q
    |||||||| ||||||| || ||||||||||| ||||| | ||| |||||| ||||| |||||| |||| |||||    
T  11415173 ctatcctagagagtttgtgaaaataagctgagaatagcttatggacatgttataagctgtttccataaactctc 11415246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 25869308 - 25869255
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttc 182  Q
    ||||||||||||||||||||||||| |  | ||| |||||||||||||| ||||    
T  25869308 agagtttatggaaataagctgaaaacaacttatggacatgtcataagttatttc 25869255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 29262923 - 29262858
Alignment:
Q  122 atcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataa 187  Q
    |||||| |||||||| |||||| |  ||||||||| | ||| ||||||||||||||||||| ||||    
T  29262923 atcctagagagtttacggaaattacttgaaaatagcttatgaacatgtcataagttgtttccataa 29262858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 30277296 - 30277263
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaa 153  Q
    |||||||| |||||||||||||||||||||||||    
T  30277296 ctatcctagagagtttatggaaataagctgaaaa 30277263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 30988029 - 30987964
Alignment:
Q  134 ttatggaaataagctgaaaa-tagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    |||||||| ||| ||||||| ||| | ||| ||||||||||||||||||| |||||||||| ||||    
T  30988029 ttatggaactaaactgaaaaatagcttatggacatgtcataagttgtttccataagctctctcaaa 30987964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 244
Target Start/End: Original strand, 1561345 - 1561421
Alignment:
Q  169 tcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataaaacaat 244  Q
    ||||||||||||| | | ||||||| |||| | |||||||||||||||||| | | |||||| ||||||||| ||||    
T  1561345 tcataagttgtttttgtgagctctctcaaacaatctcacaagtgtttatgccattagataagatcaaataaatcaat 1561421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 371
Target Start/End: Complemental strand, 3537086 - 3537046
Alignment:
Q  331 tataagctatattggagaacttatggaaataagcttaaaac 371  Q
    |||||| ||| |||||||||||||||||||||||| |||||    
T  3537086 tataagatatcttggagaacttatggaaataagctgaaaac 3537046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 328 - 364
Target Start/End: Original strand, 6881936 - 6881972
Alignment:
Q  328 ttttataagctatattggagaacttatggaaataagc 364  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  6881936 ttttataagctaaattggagaacttatgaaaataagc 6881972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 7918781 - 7918713
Alignment:
Q  171 ataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataa 238  Q
    |||||||||||  |||||||||| |||| | |||||||||||||||||||| | |||||| | ||||||    
T  7918781 ataagttgttttcataagctctcccaaacagtctcacaagtgtttatgctagtagataagtttaaataa 7918713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 372
Target Start/End: Original strand, 10114491 - 10114543
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||||| |||| || |||||||||||||||| |||| ||||||||| ||||||    
T  10114491 taagctgttttcattagctatattggagaacatatgaaaataagctgaaaaca 10114543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 372
Target Start/End: Complemental strand, 28769407 - 28769355
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||||| |||| ||||||||| |||||||  ||||||||||||||| ||||||    
T  28769407 taagctgttttcataagctattttggagagtttatggaaataagctgaaaaca 28769355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 29169147 - 29169087
Alignment:
Q  121 tatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgttt 181  Q
    |||||| |||||||||||||||||||| |||||||| | ||| | |||| ||||| |||||    
T  29169147 tatcctgaagagtttatggaaataagccgaaaatagcttatggatatgttataagctgttt 29169087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 371
Target Start/End: Complemental strand, 39881813 - 39881769
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataagcttaaaac 371  Q
    ||||||||||||||  |||||| |||||||||||||||| |||||    
T  39881813 tttttataagctatcatggagagcttatggaaataagctgaaaac 39881769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 207
Target Start/End: Original strand, 40071812 - 40071856
Alignment:
Q  164 acatgtcataagttgtttctataagctctcacaaa-actctcaca 207  Q
    ||||||||||||||||||| |||||||||| |||| |||||||||    
T  40071812 acatgtcataagttgtttccataagctctcccaaacactctcaca 40071856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 6e-16; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 3501003 - 3500940
Alignment:
Q  135 tatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    ||||||||||||||||||| || | |||||||||||||||||| |||| |||||||||||||||    
T  3501003 tatggaaataagctgaaaacagctgatgtacatgtcataagttatttccataagctctcacaaa 3500940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 48157157 - 48157093
Alignment:
Q  134 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    |||||||||||||||||||| || | ||| ||||| |||||||||||||||||||||||| ||||    
T  48157157 ttatggaaataagctgaaaacagcttatggacatggcataagttgtttctataagctctcccaaa 48157093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 12234937 - 12234870
Alignment:
Q  123 tcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagct 190  Q
    ||||| |||| |||||||||||||||||||| || | ||  |||||||||||||||||||||||||||    
T  12234937 tcctagagagcttatggaaataagctgaaaacagcttatagacatgtcataagttgtttctataagct 12234870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 238
Target Start/End: Original strand, 33894640 - 33894765
Alignment:
Q  114 cttaatctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgt 212  Q
    ||||| |||||||  | ||||||| ||||||||||||||| |  | ||| |||||||||| | |||||  ||||||||||||||| | |||||||||||     
T  33894640 cttaagctatcctggaaagtttattgaaataagctgaaaacaacttatggacatgtcatatgctgttttcataagctctcacaaacagtctcacaagtgc 33894739  T
Q  213 ttatgctaatggataagctcaaataa 238  Q
    |||||  | | |||||||||||||||    
T  33894740 ttatgtcatttgataagctcaaataa 33894765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 330
Target Start/End: Original strand, 7612352 - 7612415
Alignment:
Q  267 aacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttt 330  Q
    |||||||||||||| ||||||||||| |||||||||||| || | | ||||| |||||||||||    
T  7612352 aacttaatttgcagcttatagcataagcacttatcatgataagctcatatgtataagctatttt 7612415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 330
Target Start/End: Original strand, 40598480 - 40598543
Alignment:
Q  267 aacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttt 330  Q
    ||||||||||| |||||||||||||||||| |||||||| || |||| || | |||||||||||    
T  40598480 aacttaatttgaagtttatagcataatcacctatcatgacaagcgctcatttataagctatttt 40598543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 2767216 - 2767162
Alignment:
Q  133 tttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataa 187  Q
    |||||||||||||| |||||| |||| ||| |||||| |||||||||||||||||    
T  2767216 tttatggaaataagttgaaaacagttgatggacatgtaataagttgtttctataa 2767162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 370
Target Start/End: Complemental strand, 46280340 - 46280290
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagcttaaaa 370  Q
    |||||| ||||||||||||||||||||||||||||| ||||| ||| ||||    
T  46280340 taagctgtttttataagctatattggagaacttatgaaaataggctgaaaa 46280290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 1418460 - 1418557
Alignment:
Q  140 aaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataa 238  Q
    ||||||||||||||||||| ||| |||||   |||  |||||||||||||||||||||| |  |||| ||||| |||||| | | |||||||||||||||    
T  1418460 aaataagctgaaaatagtttatggacatggtgtaa--tgtttctataagctctcacaaacagcctcataagtgcttatgccagtagataagctcaaataa 1418557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 19022646 - 19022610
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataag 363  Q
    ||||||||||||||||||||||||||||| |||||||    
T  19022646 tttttataagctatattggagaacttatgaaaataag 19022610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 21568556 - 21568520
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataag 363  Q
    |||||||||||||||||||||||||||||||| ||||    
T  21568556 tttttataagctatattggagaacttatggaactaag 21568520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 42281556 - 42281492
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 193  Q
    |||| |||| ||||||||||||||| |  | || ||||||||||||| |||||||||||||||||    
T  42281556 agagcttatagaaataagctgaaaacaaattatttacatgtcataagctgtttctataagctctc 42281492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 4966177 - 4966248
Alignment:
Q  122 atcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 193  Q
    ||||| ||||| |||||||||||| ||||||| |  | ||| |||| |||||||| ||||||||||||||||    
T  4966177 atcctgaagagcttatggaaataaactgaaaacaacttatggacatatcataagtggtttctataagctctc 4966248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 238
Target Start/End: Complemental strand, 13960754 - 13960656
Alignment:
Q  140 aaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataa 238  Q
    |||||||||||| |||| | ||| || ||| ||||| |||||  |||||||||| |||| | |||| |||||| |||||| |||||||||||||||||||    
T  13960754 aaataagctgaacatagcttatggacttgttataagctgttttcataagctctctcaaatagtctcgcaagtgcttatgc-aatggataagctcaaataa 13960656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 36537971 - 36538026
Alignment:
Q  164 acatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgc 218  Q
    ||||||||||||||||||| ||||| |||| |||| | ||||||||||||||||||    
T  36537971 acatgtcataagttgtttccataagttctctcaaacaatctcacaagtgtttatgc 36538026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 36598388 - 36598329
Alignment:
Q  139 gaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    ||||||||||||||| || | ||| |||||||||||| |||||| |||||||||| ||||    
T  36598388 gaaataagctgaaaacagcttatgaacatgtcataagatgtttccataagctctctcaaa 36598329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 120 - 238
Target Start/End: Original strand, 40428574 - 40428693
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcaca-aaactctcacaagtgtttatgc 218  Q
    ||||||||||||| |||||||||||||||||||| |||| ||   | |||||||||| || | |||||||| || || | | ||||||||||| |||||     
T  40428574 ctatcctaaagagcttatggaaataagctgaaaacagtttatcggcgtgtcataagtcgtatgtataagctttcccagatagtctcacaagtggttatgt 40428673  T
Q  219 taatggataagctcaaataa 238  Q
     ||  |||||| ||||||||    
T  40428674 caacagataagttcaaataa 40428693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 190
Target Start/End: Complemental strand, 27626166 - 27626104
Alignment:
Q  128 aagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagct 190  Q
    ||||| ||||||||||||| | |||| |||| ||| |||||||||||| |||||| |||||||    
T  27626166 aagagcttatggaaataagtttaaaacagtttatggacatgtcataagctgtttccataagct 27626104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 49019870 - 49019912
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataa 362  Q
    ||||||||||||||||| ||||||| |||||||||| ||||||    
T  49019870 taagctatttttataagttatattgtagaacttatgaaaataa 49019912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 5017977 - 5017920
Alignment:
Q  134 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctc 191  Q
    |||||||||||||||||||||| || ||  ||||||||||||  ||||||||| ||||    
T  5017977 ttatggaaataagctgaaaatatttgatcgacatgtcataagccgtttctatatgctc 5017920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 7244689 - 7244734
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||| ||||||||||||||||| |||||| ||||||||| ||||||    
T  7244689 ttttcataagctatattggagagcttatgaaaataagctgaaaaca 7244734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 22387938 - 22387849
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatg 217  Q
    |||| ||||||||||||| | |||| |||| ||  ||||| ||||||||||||  |||||||||| |||| | ||||||| |||||||||    
T  22387938 agagcttatggaaataagttaaaaacagtttataaacatgccataagttgttttcataagctctcccaaacagtctcacacgtgtttatg 22387849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 26935612 - 26935575
Alignment:
Q  116 taatctatcctaaagagtttatggaaataagctgaaaa 153  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  26935612 taatctattctaaagagcttatggaaataagctgaaaa 26935575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 372
Target Start/End: Original strand, 39280982 - 39281023
Alignment:
Q  331 tataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||||||||| ||||||||| |||||||||||||| ||||||    
T  39280982 tataagctatcttggagaacatatggaaataagctgaaaaca 39281023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 44686972 - 44687021
Alignment:
Q  143 taagctgaaaatagttcatgtacatgtcataagttgtttctataagctct 192  Q
    |||| |||||| || ||||| ||||||||||||||||||| |||||||||    
T  44686972 taagttgaaaacagctcatggacatgtcataagttgtttccataagctct 44687021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 44808191 - 44808296
Alignment:
Q  134 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctc 232  Q
    ||||| |||||||||||||| || | ||| |||||||||||||| |||  ||||| |||  |||| | ||| |||| || ||||||||||  ||||||||    
T  44808191 ttatgaaaataagctgaaaacaggttatggacatgtcataagttattttcataaggtctatcaaacagtctgacaactgcttatgctaataaataagctc 44808290  T
Q  233 aaataa 238  Q
    ||||||    
T  44808291 aaataa 44808296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 372
Target Start/End: Complemental strand, 12792631 - 12792579
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    ||||||||||| ||||||||| ||| ||| |||||| ||||||||| ||||||    
T  12792631 taagctattttcataagctatcttgaagagcttatgaaaataagctgaaaaca 12792579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 335
Target Start/End: Original strand, 19718908 - 19718968
Alignment:
Q  275 ttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttataa 335  Q
    |||||| ||||| || || |||||||||||| |||| ||| |||||||||||||| |||||    
T  19718908 ttgcagcttataacacaagcacttatcatgataaacacttgtgtgtaagctatttctataa 19718968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 335
Target Start/End: Original strand, 21619304 - 21619368
Alignment:
Q  271 taatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttataa 335  Q
    |||||||||| |||||||| || |||||||||||| || | ||||| | |||||||||| |||||    
T  21619304 taatttgcagcttatagcacaagcacttatcatgataagcacttatctctaagctatttctataa 21619368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 27496449 - 27496386
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 193  Q
    ||||||||||||||||||||||||| || | ||| ||||||||| || ||||||  |||||||||    
T  27496449 agagtttatggaaataagctgaaaacagcttatggacatgtcatgag-tgtttccttaagctctc 27496386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 27503107 - 27503044
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 193  Q
    ||||||||||||||||||||||||| || | ||| ||||||||| || ||||||  |||||||||    
T  27503107 agagtttatggaaataagctgaaaacagcttatggacatgtcatgag-tgtttccttaagctctc 27503044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 27517898 - 27517850
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagtt 177  Q
    |||||||||||||||||||||||||  | | ||| ||||||||||||||    
T  27517898 agagtttatggaaataagctgaaaactgcttatggacatgtcataagtt 27517850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 43694638 - 43694594
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagc 364  Q
    |||||| |||||||||||||||| | |||||||||| ||||||||    
T  43694638 taagctgtttttataagctatatcgaagaacttatgaaaataagc 43694594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 44615146 - 44615082
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 193  Q
    |||||||||||||||||  |||||| || |  || ||||||||||||||||||  ||||||||||    
T  44615146 agagtttatggaaataacgtgaaaacagcttgtggacatgtcataagttgttttcataagctctc 44615082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 45078314 - 45078370
Alignment:
Q  137 tggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 193  Q
    |||||||||| |||||| || | ||| |||||||||||||| |||||||||| ||||    
T  45078314 tggaaataagttgaaaacagcttatggacatgtcataagttatttctataagttctc 45078370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 134 - 245
Target Start/End: Complemental strand, 6231853 - 6231741
Alignment:
Q  134 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctct-cacaaaactctcacaagtgtttatgctaatggataagctc 232  Q
    |||| ||||||||||||||| |||| ||| ||||||||| ||||||||| || |||| | || || | |||||||| ||||||||||| | ||||| |||    
T  6231853 ttatagaaataagctgaaaacagtttatggacatgtcattagttgtttccatgagctatccagaacaatctcacaaatgtttatgctagtagataacctc 6231754  T
Q  233 aaataaaacaatt 245  Q
    ||||||| |||||    
T  6231753 aaataaaccaatt 6231741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 23373363 - 23373267
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttat 216  Q
    ||||||| ||||| |||  ||||||||||||||| || |  || |||||||||||||||||||||||||||||| |||| | ||||||||||| ||||    
T  23373363 ctatcctgaagagcttacagaaataagctgaaaacagatg-tggacatgtcataagttgtttctataagctctcccaaacaatctcacaagtgcttat 23373267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 4202182 - 4202115
Alignment:
Q  140 aaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaaactctcacaa 208  Q
    ||||||||||||||||| | ||| |||||||||||| ||||| ||||||||||| |||||| |||||||    
T  4202182 aaataagctgaaaatagcttatggacatgtcataagctgttt-tataagctctctcaaaaccctcacaa 4202115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 320 - 363
Target Start/End: Complemental strand, 51929607 - 51929564
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataag 363  Q
    |||||| ||||||||| |||||||||||||||||||||||||||    
T  51929607 taagctgtttttataaactatattggagaacttatggaaataag 51929564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 238
Target Start/End: Original strand, 1662601 - 1662711
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggata 227  Q
    |||| ||||| |||||| || |||||| || ||| |||||||||||||||||||  ||||||||| |||| | |||| || ||  |||||||| | ||||    
T  1662601 agagcttatgaaaataaactaaaaatattttatggacatgtcataagttgtttccgtaagctctcgcaaatagtctcgcatgtacttatgctagtagata 1662700  T
Q  228 agctcaaataa 238  Q
    |||||||||||    
T  1662701 agctcaaataa 1662711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 370
Target Start/End: Original strand, 5741608 - 5741658
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagcttaaaa 370  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||| ||||    
T  5741608 taagctatttttataagctatattagagaacttatgaaaatcagctgaaaa 5741658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 238
Target Start/End: Original strand, 6976953 - 6977062
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggata 227  Q
    |||||||||||||||||| | |||| || | ||| ||||||||||||||||||| || ||||||| |||| |  |||||||||  | ||||||||  |||    
T  6976953 agagtttatggaaataagtt-aaaacagcttatgaacatgtcataagttgtttccattagctctcgcaaacagcctcacaagttctcatgctaataaata 6977051  T
Q  228 agctcaaataa 238  Q
    |||||||||||    
T  6977052 agctcaaataa 6977062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 238
Target Start/End: Complemental strand, 31517782 - 31517672
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggata 227  Q
    |||| ||||| |||||||||||||| || | ||| ||||||||| ||||||||  ||||| |||| |||| | ||||||||||| |||||| | |  |||    
T  31517782 agagcttatgaaaataagctgaaaacagcttatgaacatgtcatgagttgttttgataagttctcccaaacagtctcacaagtgcttatgccagtaaata 31517683  T
Q  228 agctcaaataa 238  Q
    |||||||||||    
T  31517682 agctcaaataa 31517672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 372
Target Start/End: Complemental strand, 12564560 - 12564515
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||| ||||||||| |||||||||||||||||||||||| ||||||    
T  12564560 ttttcataagctatcttggagaacttatggaaataagctgaaaaca 12564515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 15437982 - 15438055
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 193  Q
    |||||||  |||||||| ||||||||||||||| ||  | ||| ||||||||||||||||||| |||| |||||    
T  15437982 ctatcctcgagagtttacggaaataagctgaaagtaacttatgaacatgtcataagttgtttccataacctctc 15438055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 32859988 - 32859883
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaaactctcacaagtgtttatgctaatggataa 228  Q
    |||| ||||||||| |||||||||| | || ||| |||||| |||| ||||||| || | ||||| | ||| ||||||||||  |||||||| | |||||    
T  32859988 agagcttatggaaacaagctgaaaacaatttatgaacatgttataaattgtttccatgaactctccctaaagtctcacaagtacttatgctagtagataa 32859889  T
Q  229 gctcaa 234  Q
    ||||||    
T  32859888 gctcaa 32859883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 33723419 - 33723314
Alignment:
Q  134 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaa-aactctcacaagtgtttatgctaatggataagctc 232  Q
    |||||||||||||||||||| |  ||||| ||||||||| || |||||| ||||| | || |||  | ||||||||||||||||| || | |||||| ||    
T  33723419 ttatggaaataagctgaaaacatctcatgaacatgtcatgagctgtttccataagttttcccaagcagtctcacaagtgtttatggtagtagataagttc 33723320  T
Q  233 aaataa 238  Q
    ||||||    
T  33723319 aaataa 33723314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 3234076 - 3234040
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataag 363  Q
    ||||||||||||||||||||||||||||| |||||||    
T  3234076 tttttataagctatattggagaacttatgaaaataag 3234040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 372
Target Start/End: Complemental strand, 14630034 - 14629982
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    ||||||||||| ||||||||| |||||||  ||||||||||||||| ||||||    
T  14630034 taagctattttcataagctatcttggagactttatggaaataagctgaaaaca 14629982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 15579511 - 15579579
Alignment:
Q  130 gagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    ||||||||||||||||||||| || |  | ||| ||||||||||||||||||| | |||||||| ||||    
T  15579511 gagtttatggaaataagctgagaacaacttatggacatgtcataagttgtttccacaagctctcccaaa 15579579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 198
Target Start/End: Original strand, 24153346 - 24153378
Alignment:
Q  166 atgtcataagttgtttctataagctctcacaaa 198  Q
    |||||||||||||||||||||||||||||||||    
T  24153346 atgtcataagttgtttctataagctctcacaaa 24153378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 30815690 - 30815586
Alignment:
Q  134 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaaactctcacaagtgtttatgctaatggataagctca 233  Q
    ||||| |||||||||||||| | || ||| |||||||||||| ||||| |||||||||||  || ||| || | |||  |||||||| | ||||| ||||    
T  30815690 ttatgaaaataagctgaaaacattttatgaacatgtcataagctgtttatataagctctccaaacactatcgctagttcttatgctagtagataacctca 30815591  T
Q  234 aataa 238  Q
    |||||    
T  30815590 aataa 30815586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 37631625 - 37631577
Alignment:
Q  322 agctatttttataagctatattggagaacttatggaaataagcttaaaa 370  Q
    |||| ||||| ||||||||||||||||||||||| ||||||||| ||||    
T  37631625 agctgtttttgtaagctatattggagaacttatgaaaataagctgaaaa 37631577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 4549548 - 4549473
Alignment:
Q  164 acatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataa 238  Q
    |||||||||||||||||||||||||||||| |||| | ||||| || || |||||| | | ||||| |||||||||    
T  4549548 acatgtcataagttgtttctataagctctcccaaacagtctcagaaatgcttatgccagtagataatctcaaataa 4549473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 319 - 370
Target Start/End: Original strand, 5720926 - 5720977
Alignment:
Q  319 gtaagctatttttataagctatattggagaacttatggaaataagcttaaaa 370  Q
    ||||||||||||||||||||||||| |||||| |||| |||| |||| ||||    
T  5720926 gtaagctatttttataagctatattagagaacatatgaaaatcagctgaaaa 5720977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 222
Target Start/End: Original strand, 17420238 - 17420325
Alignment:
Q  136 atggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctc-tcacaaaactctcacaagtgtttatgctaat 222  Q
    ||||||||||| |||||| | || ||| |||||| |||||||||||  |||||||| ||| || | ||| ||||||||||||||||||    
T  17420238 atggaaataagttgaaaacaatttatggacatgtaataagttgttttcataagctcttcaaaacagtctaacaagtgtttatgctaat 17420325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 30259528 - 30259465
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctct 192  Q
    |||| ||||||||||||| |||||| | || ||  ||||||| |||||||||||||||||||||    
T  30259528 agagcttatggaaataagttgaaaacaatttattgacatgtcgtaagttgtttctataagctct 30259465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 33975589 - 33975644
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataag 175  Q
    |||||||| |||| ||||| ||||||||||||||||||| ||| |||| |||||||    
T  33975589 ctatcctagagagcttatgaaaataagctgaaaatagtttatggacatatcataag 33975644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 3597321 - 3597275
Alignment:
Q  131 agtttatggaaataagctgaaaatagttcatgtacatgtcataagtt 177  Q
    |||||||||||||||||||||||||| | |||  |||||||||||||    
T  3597321 agtttatggaaataagctgaaaatagcttatggccatgtcataagtt 3597275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 370
Target Start/End: Complemental strand, 7137066 - 7137016
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagcttaaaa 370  Q
    |||||| |||| ||||||||| |||||||||||||| ||||||||| ||||    
T  7137066 taagctgttttcataagctatcttggagaacttatgaaaataagctgaaaa 7137016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 335
Target Start/End: Complemental strand, 7137172 - 7137110
Alignment:
Q  273 atttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttataa 335  Q
    |||||||||||||||||||  |||||||| ||| || ||||||| | ||| ||||||||||||    
T  7137172 atttgcagtttatagcataggcacttatcttgataagcgcttatatataaactatttttataa 7137110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 120 - 198
Target Start/End: Original strand, 10439705 - 10439783
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    |||||||  ||||||||||||||||||||||||  || | ||| ||||||||||  ||||||  |||||||||| ||||    
T  10439705 ctatcctggagagtttatggaaataagctgaaagcagattatggacatgtcatagtttgttttcataagctctcccaaa 10439783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 191
Target Start/End: Original strand, 17628635 - 17628689
Alignment:
Q  137 tggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctc 191  Q
    |||||||| |||||||| || | ||| ||||||||||||||||||| ||||||||    
T  17628635 tggaaatatgctgaaaacagcttatggacatgtcataagttgtttccataagctc 17628689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 218
Target Start/End: Original strand, 26179500 - 26179589
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcac-aaaactctcacaagtgtttatgc 218  Q
    |||||||||||||| | |||||||| |  ||||| |||||||||||||||||||  ||| ||||| | || | ||||||||||||||||||    
T  26179500 agagtttatggaaa-atgctgaaaacaactcatgcacatgtcataagttgtttccttaaactctccctaacagtctcacaagtgtttatgc 26179589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 4549758 - 4549827
Alignment:
Q  266 taacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttataa 335  Q
    ||||||||||||||| ||||||||||| | |||| || || ||| ||||||||  ||||||||| |||||    
T  4549758 taacttaatttgcagcttatagcataaacgcttagcacgataaatgcttatgtacaagctatttctataa 4549827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 5157140 - 5157189
Alignment:
Q  169 tcataagttgtttctataagctctcacaaa-actctcacaagtgtttatg 217  Q
    ||||||||||||||||||||||||| |||| | | |||||||||||||||    
T  5157140 tcataagttgtttctataagctctcccaaacagtttcacaagtgtttatg 5157189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 7262569 - 7262496
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 193  Q
    ||||||| ||||| || |||||||||| |||||| || | ||| |||||||| ||| ||||| |||||||||||    
T  7262569 ctatcctgaagagcttgtggaaataaggtgaaaacagcttatgaacatgtcaaaagctgtttttataagctctc 7262496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 372
Target Start/End: Original strand, 10809362 - 10809399
Alignment:
Q  335 agctatattggagaacttatggaaataagcttaaaaca 372  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  10809362 agctatattggagaacttatgaaaataagctgaaaaca 10809399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 28083345 - 28083308
Alignment:
Q  116 taatctatcctaaagagtttatggaaataagctgaaaa 153  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  28083345 taatctatcctaaagagcttatgaaaataagctgaaaa 28083308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 35017683 - 35017720
Alignment:
Q  201 tctcacaagtgtttatgctaatggataagctcaaataa 238  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  35017683 tctcacaagtgtttatgccaatagataagctcaaataa 35017720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 42174864 - 42174909
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||||||||| |||||||||||||||||| ||||||| | ||||||    
T  42174864 tttttataagttatattggagaacttatgaaaataagttaaaaaca 42174909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 365
Target Start/End: Original strand, 44422701 - 44422746
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagct 365  Q
    |||||||||||||||||||||  |||||| |||||| |||||||||    
T  44422701 taagctatttttataagctatcctggagagcttatgaaaataagct 44422746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 48748564 - 48748527
Alignment:
Q  201 tctcacaagtgtttatgctaatggataagctcaaataa 238  Q
    |||||||||||||||||  |||||||||||||||||||    
T  48748564 tctcacaagtgtttatgtcaatggataagctcaaataa 48748527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 335
Target Start/End: Complemental strand, 1829115 - 1829063
Alignment:
Q  283 tatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttataa 335  Q
    |||||||||| |||||||||||| || ||||||||| ||||  ||||||||||    
T  1829115 tatagcataaacacttatcatgataagcgcttatgtataagtcatttttataa 1829063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 234
Target Start/End: Complemental strand, 4118871 - 4118807
Alignment:
Q  171 ataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaa 234  Q
    ||||||||||||||||||||||  |||| | ||||| |||||||||| ||| | |||||||||||    
T  4118871 ataagttgtttctataagctctttcaaagagtctcaaaagtgtttatactagtagataagctcaa 4118807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 372
Target Start/End: Original strand, 6102156 - 6102208
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||||| |||| ||||||||| | |||||| ||||||||||||||| ||||||    
T  6102156 taagctgttttcataagctatctgggagaatttatggaaataagctgaaaaca 6102208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 15784339 - 15784383
Alignment:
Q  328 ttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    ||||||||||||| ||||||||||| || ||||||||| ||||||    
T  15784339 ttttataagctatcttggagaacttgtgaaaataagctaaaaaca 15784383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 17603445 - 17603409
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataag 363  Q
    |||||||||||||||||||||||||| || |||||||    
T  17603445 tttttataagctatattggagaacttctgaaaataag 17603409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 24502861 - 24502801
Alignment:
Q  138 ggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 198  Q
    |||||||||||||||| |  | ||  |||||||||||||||||||| ||||||||| ||||    
T  24502861 ggaaataagctgaaaacaaattattgacatgtcataagttgtttctgtaagctctctcaaa 24502801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 372
Target Start/End: Original strand, 27140480 - 27140532
Alignment:
Q  320 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||||| ||||||||||||||  |||||| |||||| ||||||||| ||||||    
T  27140480 taagctgtttttataagctatcatggagagcttatgcaaataagctgaaaaca 27140532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 35925718 - 35925770
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgttt 181  Q
    |||||||||||||||||| |||||| || | ||| |||||||||||| |||||    
T  35925718 agagtttatggaaataagttgaaaacagcttatgaacatgtcataagctgttt 35925770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 352
Target Start/End: Original strand, 41505688 - 41505720
Alignment:
Q  320 taagctatttttataagctatattggagaactt 352  Q
    |||||| ||||||||||||||||||||||||||    
T  41505688 taagctgtttttataagctatattggagaactt 41505720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 45999330 - 45999270
Alignment:
Q  129 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagc 189  Q
    |||| ||| ||| |||||||||||| |||| ||| |||||||||||| || ||||||||||    
T  45999330 agagattacggacataagctgaaaacagtttatgaacatgtcataagctgcttctataagc 45999270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 49938756 - 49938792
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataag 363  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  49938756 tttttataagctatattagagaacttatgaaaataag 49938792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 27020 - 27075
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataag 175  Q
    ||||| || |||| |||||||||||||||||||| |||| ||| ||||||||||||    
T  27020 ctatcatagagagcttatggaaataagctgaaaacagtttatgcacatgtcataag 27075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 12755 - 12678
Alignment:
Q  120 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaa 197  Q
    ||||| || |||| |||||||  ||||||||||| |  | ||| ||||||||||||||||||| ||||| ||||||||    
T  12755 ctatcttagagagcttatggagctaagctgaaaacaacttatggacatgtcataagttgtttccataaggtctcacaa 12678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 23640 - 23685
Alignment:
Q  327 tttttataagctatattggagaacttatggaaataagcttaaaaca 372  Q
    |||||||||||||||||||||||||| || ||||||| | ||||||    
T  23640 tttttataagctatattggagaacttgtgaaaataagttgaaaaca 23685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 1167 - 1123
Alignment:
Q  137 tggaaataagctgaaaatagttcatgtacatgtcataagttgttt 181  Q
    ||||||| ||||||||| |||||||| |||||||||||| |||||    
T  1167 tggaaattagctgaaaacagttcatgaacatgtcataagctgttt 1123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University