View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18809_low_22 (Length: 434)
Name: NF18809_low_22
Description: NF18809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18809_low_22 |
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Alignment Details
Target: chr8 (Bit Score: 344; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 7 - 429
Target Start/End: Original strand, 8895161 - 8895581
Alignment:
| Q |
7 |
cctatgagaaccaactcacttaatcttttggaaacaaaaatctatccatttaaaaaataataattgaagggcaccaagtaccacttgacaaccgtcatga |
106 |
Q |
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| T |
8895161 |
cctatcagaaccaactcacttaatcttttggaaacaaaaatctatccatttaaaaaataataattgaagggcaccaagtaccacttgacaactgtcatga |
8895260 |
T |
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| Q |
107 |
aaacatagacaaaaaatttgactacacttaannnnnnnnnnnnnnggtaagcatcacatatggagccaagttccctgtctgctaacattaacagaaatac |
206 |
Q |
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| T |
8895261 |
aaacatagacaaaaaatttgactacacttaatttttttttttt--ggtaagcatcaaatgtggagccaagttccctgtctgccaacattaacagaaatac |
8895358 |
T |
|
| Q |
207 |
cttctctttttagtaacagtaaaatgtgaaagctatgacagtagtgattttatttattttaacttttcacaaccaagaacaaataccaaaaatggagaaa |
306 |
Q |
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| T |
8895359 |
cttctctttttagtaacagtaaaatgtgaaagctatgacagtagtgattttatttattttaacttttcacaaccaagaacaaataccaaaaatggagaaa |
8895458 |
T |
|
| Q |
307 |
aagggtaggatgaacccaaagagagactataccaggtgtgaatgacccaagagaataactgagcaaggctgtgtggctggaattgagcctttcacttatg |
406 |
Q |
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| T |
8895459 |
aagggtaggatgaacccaaagagagactataccaggtgtgaatgacccaagagaataactgagcaaggctatgtggctggaattgagcctttcactgatg |
8895558 |
T |
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| Q |
407 |
catgttctacacgtttatctctg |
429 |
Q |
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| T |
8895559 |
catgttctacacgtttatttctg |
8895581 |
T |
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