View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18809_low_40 (Length: 336)
Name: NF18809_low_40
Description: NF18809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18809_low_40 |
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Alignment Details
Target: chr8 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 30988607 - 30988926
Alignment:
| Q |
1 |
attttttcatggcctatttttacagtaaccttatttttctctctatatttggaagataataacatgaacagagaacacagatgcaaaacacatatcatac |
100 |
Q |
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| T |
30988607 |
attttttcatggcctatttttacagtaaccttatttttctctctatatttggaagataataacatgaacagagaacacagatgcaaaacacatatcatac |
30988706 |
T |
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| Q |
101 |
tcaaaaccaaccagggaaagaataaagcagtaaagtgcttctcattattataacaattaacatcatgtgaataagaatatgactttactcaaaaagatta |
200 |
Q |
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| T |
30988707 |
tcaaaaccaaccagggaaagaataaagcagtaaagtgcttctcattattataacaattaacagcatgtgaataagaatatgactttactcaaaaagatta |
30988806 |
T |
|
| Q |
201 |
atatacctaaagtttgattagctgatgccaatatttagcagaaaacttcatattcatttcaaactttaactggaagaaggaggcaaaatcagaaatgaag |
300 |
Q |
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| T |
30988807 |
atatacctaaagtttgattagctgatgccaatatttagcagaaaacttcatattcatttcaaactttaactggaagaaggaggcaaaatcagaaatgaag |
30988906 |
T |
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| Q |
301 |
ttgaatgattggactatatt |
320 |
Q |
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|||||||||||||||||||| |
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| T |
30988907 |
ttgaatgattggactatatt |
30988926 |
T |
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