View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18809_low_54 (Length: 256)

Name: NF18809_low_54
Description: NF18809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18809_low_54
NF18809_low_54
[»] chr6 (41 HSPs)
chr6 (9-244)||(32518341-32518576)
chr6 (9-236)||(3480501-3480728)
chr6 (26-236)||(32454266-32454476)
chr6 (9-244)||(18644948-18645182)
chr6 (9-246)||(11357040-11357275)
chr6 (10-244)||(9399880-9400114)
chr6 (9-244)||(20525178-20525413)
chr6 (9-232)||(32437162-32437372)
chr6 (9-239)||(13610705-13610925)
chr6 (10-244)||(6902743-6902976)
chr6 (10-244)||(10569764-10569998)
chr6 (38-244)||(7371185-7371391)
chr6 (10-244)||(21068635-21068869)
chr6 (28-198)||(33267117-33267287)
chr6 (10-232)||(7051090-7051312)
chr6 (10-191)||(21091157-21091338)
chr6 (10-198)||(21045366-21045554)
chr6 (135-236)||(3456766-3456867)
chr6 (135-239)||(13613587-13613691)
chr6 (135-236)||(32455896-32455997)
chr6 (165-232)||(32439126-32439193)
chr6 (135-244)||(33276811-33276917)
chr6 (57-235)||(14337685-14337862)
chr6 (165-246)||(20523374-20523455)
chr6 (165-246)||(10568407-10568488)
chr6 (141-246)||(17950569-17950674)
chr6 (165-232)||(7372993-7373060)
chr6 (165-246)||(35175898-35175979)
chr6 (165-217)||(3018467-3018519)
chr6 (165-244)||(11355232-11355311)
chr6 (9-56)||(18644914-18644961)
chr6 (193-244)||(32516887-32516938)
chr6 (9-56)||(32518307-32518354)
chr6 (165-239)||(14338510-14338584)
chr6 (191-244)||(8605351-8605404)
chr6 (165-246)||(17952077-17952158)
chr6 (165-236)||(6899503-6899574)
chr6 (193-244)||(7049796-7049847)
chr6 (164-246)||(4641363-4641445)
chr6 (164-213)||(2968180-2968229)
chr6 (165-201)||(9398713-9398749)
[»] chr3 (83 HSPs)
chr3 (9-244)||(46308817-46309052)
chr3 (9-244)||(38193354-38193589)
chr3 (9-244)||(53092633-53092868)
chr3 (9-244)||(7883338-7883573)
chr3 (9-244)||(41979196-41979431)
chr3 (9-244)||(46310280-46310515)
chr3 (9-244)||(3150262-3150497)
chr3 (9-244)||(46609159-46609394)
chr3 (9-244)||(53094117-53094352)
chr3 (9-244)||(54899918-54900153)
chr3 (9-236)||(53187760-53187987)
chr3 (9-236)||(35903843-35904070)
chr3 (8-244)||(44795733-44795969)
chr3 (9-244)||(2661752-2661987)
chr3 (9-244)||(46611147-46611382)
chr3 (9-236)||(28626429-28626656)
chr3 (9-244)||(2378827-2379062)
chr3 (9-244)||(611066-611301)
chr3 (13-244)||(38191905-38192124)
chr3 (9-244)||(54412391-54412626)
chr3 (9-244)||(17516817-17517052)
chr3 (9-244)||(44267991-44268226)
chr3 (9-239)||(23291585-23291814)
chr3 (10-244)||(42282318-42282552)
chr3 (9-244)||(30598347-30598582)
chr3 (9-235)||(46113949-46114176)
chr3 (8-221)||(21350448-21350661)
chr3 (10-244)||(51686239-51686473)
chr3 (9-229)||(27897176-27897395)
chr3 (11-244)||(48829366-48829599)
chr3 (7-204)||(43766889-43767086)
chr3 (165-244)||(2660222-2660301)
chr3 (135-235)||(3152243-3152343)
chr3 (165-244)||(44794218-44794296)
chr3 (165-244)||(2226207-2226286)
chr3 (165-244)||(41977760-41977839)
chr3 (165-244)||(53190814-53190893)
chr3 (165-244)||(27899136-27899215)
chr3 (165-244)||(54898447-54898526)
chr3 (165-236)||(21348741-21348812)
chr3 (165-235)||(35905767-35905837)
chr3 (135-212)||(19987619-19987696)
chr3 (165-244)||(30599973-30600052)
chr3 (165-246)||(23774160-23774241)
chr3 (165-244)||(17515320-17515399)
chr3 (149-248)||(45897056-45897155)
chr3 (165-244)||(51684620-51684699)
chr3 (152-248)||(48635362-48635458)
chr3 (165-248)||(2977364-2977447)
chr3 (165-244)||(43765147-43765226)
chr3 (165-244)||(46112497-46112576)
chr3 (135-233)||(23293195-23293293)
chr3 (165-246)||(23888807-23888888)
chr3 (135-248)||(40963370-40963483)
chr3 (165-246)||(41944584-41944665)
chr3 (9-56)||(2661718-2661765)
chr3 (9-56)||(3150484-3150531)
chr3 (193-244)||(7884927-7884978)
chr3 (165-248)||(23887204-23887287)
chr3 (113-168)||(24846494-24846548)
chr3 (9-56)||(53187974-53188021)
chr3 (149-207)||(33051451-33051509)
chr3 (9-55)||(53092856-53092902)
chr3 (135-216)||(30501155-30501236)
chr3 (165-246)||(40508946-40509027)
chr3 (165-246)||(45898383-45898464)
chr3 (165-246)||(48633885-48633966)
chr3 (165-246)||(51454285-51454366)
chr3 (149-248)||(1847631-1847730)
chr3 (167-246)||(18430308-18430387)
chr3 (9-56)||(28626643-28626690)
chr3 (149-248)||(33111847-33111946)
chr3 (149-208)||(37865430-37865489)
chr3 (9-56)||(38193320-38193367)
chr3 (149-248)||(40508499-40508598)
chr3 (165-244)||(42279517-42279596)
chr3 (9-56)||(44795700-44795747)
chr3 (9-56)||(46309039-46309086)
chr3 (9-56)||(46310246-46310293)
chr3 (9-56)||(46609381-46609428)
chr3 (9-56)||(53094083-53094130)
chr3 (165-246)||(31887487-31887568)
chr3 (149-217)||(31885555-31885623)
[»] chr8 (78 HSPs)
chr8 (9-244)||(27692681-27692916)
chr8 (9-244)||(38548675-38548910)
chr8 (9-239)||(13106819-13107049)
chr8 (9-239)||(13283839-13284069)
chr8 (9-239)||(8608252-8608483)
chr8 (9-244)||(33761079-33761314)
chr8 (9-244)||(29237161-29237396)
chr8 (9-244)||(29239031-29239266)
chr8 (9-244)||(601548-601783)
chr8 (9-244)||(33707216-33707451)
chr8 (9-244)||(35510663-35510898)
chr8 (9-236)||(35509232-35509459)
chr8 (9-244)||(33762561-33762792)
chr8 (27-236)||(15308123-15308332)
chr8 (27-236)||(15488492-15488701)
chr8 (8-236)||(27404228-27404456)
chr8 (9-244)||(42943270-42943505)
chr8 (9-236)||(22273735-22273962)
chr8 (10-244)||(26238736-26238970)
chr8 (28-233)||(5037927-5038130)
chr8 (10-239)||(41823905-41824134)
chr8 (10-244)||(43261984-43262216)
chr8 (10-236)||(3151975-3152201)
chr8 (28-244)||(13484555-13484770)
chr8 (38-232)||(41040742-41040936)
chr8 (135-244)||(27691164-27691273)
chr8 (113-239)||(15562439-15562564)
chr8 (165-244)||(13108391-13108470)
chr8 (165-244)||(13282488-13282567)
chr8 (165-244)||(38547238-38547317)
chr8 (135-244)||(33708829-33708937)
chr8 (165-244)||(8609842-8609921)
chr8 (135-236)||(15305815-15305916)
chr8 (135-236)||(15486184-15486285)
chr8 (173-244)||(34681074-34681145)
chr8 (53-198)||(17807075-17807220)
chr8 (135-236)||(27406922-27407023)
chr8 (135-244)||(42941784-42941893)
chr8 (135-239)||(9671992-9672096)
chr8 (165-244)||(26242369-26242448)
chr8 (56-243)||(29694208-29694395)
chr8 (165-246)||(28433751-28433832)
chr8 (165-237)||(41042639-41042711)
chr8 (165-244)||(5036455-5036534)
chr8 (165-244)||(7745167-7745246)
chr8 (165-248)||(9184389-9184472)
chr8 (149-248)||(40019162-40019261)
chr8 (165-244)||(41825699-41825778)
chr8 (134-248)||(9186616-9186730)
chr8 (195-244)||(600770-600819)
chr8 (165-218)||(33750419-33750472)
chr8 (165-233)||(13486154-13486222)
chr8 (149-248)||(31823462-31823561)
chr8 (165-244)||(22272344-22272425)
chr8 (10-56)||(27692648-27692694)
chr8 (165-246)||(462405-462486)
chr8 (164-245)||(31821427-31821508)
chr8 (165-246)||(33160183-33160264)
chr8 (149-217)||(24526933-24527001)
chr8 (149-213)||(42894817-42894881)
chr8 (149-248)||(461182-461281)
chr8 (9-56)||(601514-601561)
chr8 (165-248)||(5075374-5075457)
chr8 (116-191)||(12515147-12515222)
chr8 (165-248)||(25707303-25707386)
chr8 (9-56)||(29238997-29239044)
chr8 (149-248)||(33748338-33748437)
chr8 (9-56)||(33761301-33761348)
chr8 (9-56)||(33762527-33762574)
chr8 (9-56)||(35509446-35509493)
chr8 (9-56)||(35510629-35510676)
chr8 (149-248)||(44620655-44620754)
chr8 (164-246)||(31201177-31201259)
chr8 (165-246)||(32822369-32822450)
chr8 (116-176)||(11719525-11719585)
chr8 (9-41)||(27404457-27404489)
chr8 (165-217)||(31199522-31199574)
chr8 (149-217)||(32824257-32824325)
[»] chr4 (73 HSPs)
chr4 (9-244)||(43507177-43507412)
chr4 (9-244)||(43508497-43508732)
chr4 (9-244)||(51013730-51013965)
chr4 (9-244)||(4173584-4173819)
chr4 (9-244)||(33265854-33266089)
chr4 (9-244)||(319283-319518)
chr4 (9-244)||(320744-320979)
chr4 (27-244)||(33264392-33264609)
chr4 (9-236)||(5439491-5439718)
chr4 (9-236)||(833241-833468)
chr4 (9-233)||(43520953-43521177)
chr4 (9-236)||(5437829-5438056)
chr4 (9-236)||(834886-835113)
chr4 (9-244)||(35401759-35401994)
chr4 (9-244)||(20493837-20494072)
chr4 (13-244)||(39345574-39345805)
chr4 (9-244)||(49524577-49524812)
chr4 (64-244)||(4169696-4169876)
chr4 (28-235)||(42982315-42982522)
chr4 (10-239)||(54387728-54387955)
chr4 (28-244)||(11254129-11254344)
chr4 (10-244)||(48645265-48645499)
chr4 (135-244)||(43519434-43519543)
chr4 (61-233)||(2691394-2691566)
chr4 (57-244)||(20819995-20820176)
chr4 (165-244)||(41761781-41761860)
chr4 (9-68)||(4172298-4172357)
chr4 (165-244)||(49523134-49523213)
chr4 (135-248)||(6999272-6999385)
chr4 (149-246)||(39922993-39923090)
chr4 (105-168)||(41759492-41759555)
chr4 (141-248)||(42879281-42879388)
chr4 (165-244)||(51011936-51012015)
chr4 (149-246)||(5486038-5486135)
chr4 (165-246)||(39083647-39083728)
chr4 (165-246)||(44558528-44558609)
chr4 (164-241)||(52868183-52868260)
chr4 (54-218)||(230472-230635)
chr4 (165-233)||(41781560-41781628)
chr4 (149-248)||(4520437-4520536)
chr4 (9-56)||(43520919-43520966)
chr4 (149-248)||(43778395-43778494)
chr4 (149-248)||(44992814-44992913)
chr4 (165-244)||(48813797-48813876)
chr4 (164-246)||(44794794-44794876)
chr4 (165-235)||(48646782-48646852)
chr4 (165-246)||(5484548-5484629)
chr4 (165-246)||(39189390-39189471)
chr4 (165-246)||(39921502-39921583)
chr4 (165-233)||(35404480-35404548)
chr4 (165-217)||(44792971-44793023)
chr4 (9-56)||(320710-320757)
chr4 (9-56)||(833455-833502)
chr4 (9-56)||(834852-834899)
chr4 (149-248)||(2828397-2828496)
chr4 (9-56)||(4173550-4173597)
chr4 (9-56)||(5438043-5438090)
chr4 (105-156)||(11642016-11642067)
chr4 (9-56)||(33264615-33264662)
chr4 (9-56)||(33265820-33265867)
chr4 (149-248)||(39085138-39085237)
chr4 (9-56)||(43507399-43507446)
chr4 (9-56)||(43508463-43508510)
chr4 (165-244)||(43779902-43779981)
chr4 (8-41)||(319520-319553)
chr4 (135-248)||(25995084-25995197)
chr4 (58-191)||(26397819-26397952)
chr4 (165-246)||(42880790-42880871)
chr4 (148-244)||(2693271-2693366)
chr4 (149-205)||(27626714-27626770)
chr4 (135-179)||(37481034-37481078)
chr4 (165-217)||(44994322-44994374)
chr4 (141-217)||(51040772-51040848)
[»] chr7 (69 HSPs)
chr7 (9-244)||(35403463-35403698)
chr7 (9-244)||(35401979-35402214)
chr7 (9-236)||(20479563-20479790)
chr7 (27-236)||(27664448-27664657)
chr7 (12-244)||(13169530-13169762)
chr7 (9-244)||(77858-78093)
chr7 (9-244)||(37113951-37114186)
chr7 (9-244)||(39857655-39857890)
chr7 (10-244)||(47384304-47384538)
chr7 (9-244)||(24226591-24226826)
chr7 (9-176)||(29994955-29995122)
chr7 (9-236)||(6605241-6605468)
chr7 (44-244)||(48227820-48228020)
chr7 (9-244)||(34775008-34775243)
chr7 (9-244)||(35691437-35691672)
chr7 (56-244)||(46437117-46437305)
chr7 (23-244)||(45361134-45361355)
chr7 (9-239)||(22211617-22211836)
chr7 (13-239)||(22155706-22155921)
chr7 (8-244)||(23904593-23904842)
chr7 (10-239)||(37791669-37791898)
chr7 (87-239)||(38549562-38549714)
chr7 (135-244)||(27666070-27666179)
chr7 (59-244)||(13039536-13039721)
chr7 (165-244)||(56340-56419)
chr7 (135-236)||(20478060-20478161)
chr7 (9-145)||(38472369-38472505)
chr7 (165-244)||(29996549-29996628)
chr7 (165-244)||(24228444-24228523)
chr7 (165-244)||(39859264-39859343)
chr7 (119-235)||(48311687-48311803)
chr7 (194-244)||(29994916-29994966)
chr7 (165-236)||(38474178-38474249)
chr7 (171-232)||(13168142-13168203)
chr7 (165-233)||(30940460-30940528)
chr7 (149-248)||(3690156-3690255)
chr7 (149-248)||(4321044-4321143)
chr7 (165-244)||(6602345-6602424)
chr7 (149-248)||(30108571-30108670)
chr7 (165-244)||(34776950-34777029)
chr7 (165-236)||(37796216-37796287)
chr7 (149-248)||(45465170-45465269)
chr7 (149-248)||(46810711-46810810)
chr7 (165-246)||(45463678-45463759)
chr7 (165-246)||(47341721-47341802)
chr7 (135-191)||(34785084-34785140)
chr7 (9-56)||(29995109-29995156)
chr7 (165-248)||(33038832-33038915)
chr7 (165-244)||(37115561-37115640)
chr7 (165-236)||(45359354-45359425)
chr7 (149-248)||(46994666-46994765)
chr7 (132-214)||(35344292-35344374)
chr7 (165-246)||(38613516-38613597)
chr7 (165-246)||(46996737-46996818)
chr7 (165-217)||(8421453-8421505)
chr7 (149-217)||(33775445-33775513)
chr7 (184-244)||(47386263-47386323)
chr7 (137-180)||(7403785-7403828)
chr7 (193-244)||(23906295-23906346)
chr7 (9-56)||(35403429-35403476)
chr7 (149-248)||(36762666-36762765)
chr7 (149-248)||(40785534-40785633)
chr7 (9-64)||(46437825-46437880)
chr7 (132-214)||(8423283-8423365)
chr7 (165-246)||(4322607-4322688)
chr7 (165-246)||(46812617-46812698)
chr7 (165-217)||(2167516-2167568)
chr7 (149-248)||(33037699-33037799)
chr7 (165-217)||(35342462-35342514)
[»] chr1 (73 HSPs)
chr1 (9-244)||(26223597-26223832)
chr1 (9-244)||(27089123-27089358)
chr1 (9-244)||(37345806-37346041)
chr1 (9-236)||(46582028-46582255)
chr1 (9-244)||(8167952-8168186)
chr1 (9-244)||(25276752-25276987)
chr1 (9-244)||(34776579-34776814)
chr1 (9-244)||(4854420-4854655)
chr1 (9-244)||(8169412-8169647)
chr1 (9-236)||(1444025-1444252)
chr1 (9-236)||(47011474-47011701)
chr1 (9-236)||(9120057-9120284)
chr1 (9-239)||(33599233-33599463)
chr1 (9-244)||(2870920-2871155)
chr1 (13-244)||(31236829-31237060)
chr1 (9-246)||(51894575-51894812)
chr1 (9-244)||(3011865-3012100)
chr1 (10-244)||(52641898-52642132)
chr1 (9-244)||(50554173-50554408)
chr1 (9-181)||(45044993-45045165)
chr1 (10-244)||(37087981-37088215)
chr1 (13-246)||(23577644-23577882)
chr1 (38-184)||(6816906-6817053)
chr1 (135-236)||(47013087-47013188)
chr1 (135-236)||(9121673-9121774)
chr1 (165-244)||(33602679-33602758)
chr1 (165-244)||(46583591-46583670)
chr1 (165-244)||(4856001-4856080)
chr1 (165-244)||(34778173-34778252)
chr1 (9-88)||(20944934-20945013)
chr1 (165-236)||(31238530-31238601)
chr1 (165-244)||(2869589-2869668)
chr1 (165-244)||(25278403-25278482)
chr1 (165-244)||(25278988-25279067)
chr1 (165-244)||(27087293-27087372)
chr1 (191-236)||(1442568-1442613)
chr1 (165-244)||(3013511-3013590)
chr1 (165-244)||(6818713-6818792)
chr1 (185-244)||(37344352-37344411)
chr1 (135-237)||(51896157-51896259)
chr1 (181-244)||(6816875-6816938)
chr1 (149-248)||(11152551-11152650)
chr1 (149-248)||(44159280-44159379)
chr1 (165-244)||(50556132-50556211)
chr1 (165-244)||(52643650-52643729)
chr1 (149-198)||(51123541-51123590)
chr1 (192-244)||(33599197-33599249)
chr1 (149-248)||(5784853-5784952)
chr1 (149-248)||(31803686-31803785)
chr1 (9-56)||(37345772-37345819)
chr1 (149-248)||(45379091-45379190)
chr1 (174-244)||(25278864-25278934)
chr1 (9-55)||(27089089-27089135)
chr1 (149-198)||(6577091-6577140)
chr1 (165-214)||(15104481-15104530)
chr1 (165-246)||(42134490-42134571)
chr1 (152-248)||(25173020-25173116)
chr1 (165-217)||(27952502-27952554)
chr1 (149-217)||(35478124-35478192)
chr1 (9-56)||(8168173-8168220)
chr1 (9-56)||(8169378-8169425)
chr1 (9-56)||(25276974-25277021)
chr1 (9-56)||(25277008-25277055)
chr1 (9-56)||(26223819-26223866)
chr1 (149-248)||(33679265-33679364)
chr1 (116-191)||(35009625-35009700)
chr1 (113-171)||(3369513-3369571)
chr1 (165-246)||(18183978-18184059)
chr1 (149-218)||(42136230-42136299)
chr1 (149-217)||(18180537-18180605)
chr1 (165-217)||(36895545-36895597)
chr1 (165-217)||(44157470-44157522)
chr1 (165-217)||(46638842-46638894)
[»] chr5 (50 HSPs)
chr5 (9-244)||(21842836-21843071)
chr5 (9-236)||(40782055-40782282)
chr5 (9-244)||(7269290-7269525)
chr5 (9-244)||(17577779-17578014)
chr5 (9-236)||(29620156-29620383)
chr5 (30-244)||(2852896-2853110)
chr5 (9-244)||(12738580-12738815)
chr5 (9-244)||(12801403-12801638)
chr5 (9-236)||(42471566-42471793)
chr5 (9-244)||(30463910-30464145)
chr5 (23-244)||(8541129-8541350)
chr5 (8-244)||(28813608-28813846)
chr5 (23-244)||(28821948-28822169)
chr5 (37-244)||(34328695-34328906)
chr5 (8-232)||(32134253-32134482)
chr5 (135-236)||(40780568-40780669)
chr5 (165-244)||(24541247-24541326)
chr5 (135-232)||(29621786-29621883)
chr5 (53-244)||(41493854-41494045)
chr5 (9-83)||(24539933-24540007)
chr5 (135-236)||(42473612-42473713)
chr5 (165-244)||(2854362-2854440)
chr5 (165-244)||(17574328-17574407)
chr5 (165-244)||(36057648-36057727)
chr5 (65-175)||(27077367-27077477)
chr5 (165-244)||(7267853-7267932)
chr5 (165-244)||(34327645-34327724)
chr5 (135-248)||(1344786-1344899)
chr5 (165-245)||(43492133-43492213)
chr5 (165-236)||(2179805-2179876)
chr5 (165-244)||(8539685-8539764)
chr5 (165-244)||(30468315-30468394)
chr5 (165-246)||(38596876-38596957)
chr5 (149-248)||(32089911-32090010)
chr5 (149-248)||(32835882-32835981)
chr5 (149-248)||(33257746-33257845)
chr5 (165-246)||(18728637-18728718)
chr5 (9-56)||(17577745-17577792)
chr5 (165-244)||(18625043-18625122)
chr5 (9-56)||(24539994-24540041)
chr5 (149-248)||(42619295-42619394)
chr5 (135-248)||(1343227-1343340)
chr5 (165-246)||(35395341-35395422)
chr5 (165-246)||(43318095-43318176)
chr5 (149-213)||(18726606-18726670)
chr5 (9-60)||(2181540-2181591)
chr5 (165-248)||(40330517-40330600)
chr5 (9-55)||(21842802-21842848)
chr5 (165-215)||(38176671-38176721)
chr5 (165-215)||(38203895-38203945)
[»] chr2 (52 HSPs)
chr2 (9-236)||(24205616-24205843)
chr2 (9-244)||(40561722-40561957)
chr2 (9-244)||(14387359-14387594)
chr2 (9-244)||(16764456-16764690)
chr2 (9-236)||(2577324-2577551)
chr2 (9-236)||(37022029-37022256)
chr2 (32-236)||(6783382-6783586)
chr2 (9-239)||(19906697-19906927)
chr2 (9-239)||(39663169-39663397)
chr2 (9-244)||(16376746-16376981)
chr2 (9-244)||(6799251-6799487)
chr2 (9-244)||(39456624-39456859)
chr2 (9-244)||(42517568-42517802)
chr2 (10-244)||(19581424-19581658)
chr2 (9-244)||(34400324-34400553)
chr2 (53-239)||(37646366-37646552)
chr2 (9-176)||(17697953-17698120)
chr2 (135-235)||(24208067-24208167)
chr2 (58-244)||(31474972-31475159)
chr2 (135-236)||(6786006-6786107)
chr2 (135-244)||(14389109-14389218)
chr2 (57-244)||(161967-162153)
chr2 (135-236)||(37020526-37020627)
chr2 (165-244)||(16763086-16763165)
chr2 (165-244)||(39664803-39664882)
chr2 (165-244)||(40560233-40560312)
chr2 (148-244)||(17696216-17696312)
chr2 (165-244)||(2766944-2767023)
chr2 (165-244)||(44709800-44709879)
chr2 (165-244)||(19908301-19908381)
chr2 (149-248)||(41128-41227)
chr2 (149-248)||(11021539-11021638)
chr2 (149-248)||(28248161-28248260)
chr2 (165-232)||(6797529-6797596)
chr2 (149-248)||(7745258-7745357)
chr2 (149-248)||(17948913-17949012)
chr2 (164-246)||(39564-39646)
chr2 (174-248)||(361451-361525)
chr2 (165-239)||(37417288-37417362)
chr2 (165-217)||(41708432-41708484)
chr2 (149-248)||(33199-33298)
chr2 (9-56)||(6783587-6783634)
chr2 (165-248)||(11315370-11315453)
chr2 (9-56)||(16764422-16764469)
chr2 (9-56)||(24205830-24205877)
chr2 (165-246)||(38148503-38148585)
chr2 (165-246)||(11023048-11023128)
chr2 (165-246)||(25619668-25619749)
chr2 (165-246)||(28246671-28246752)
chr2 (164-217)||(41706576-41706629)
chr2 (165-217)||(29909695-29909747)
chr2 (165-244)||(42519260-42519340)
[»] scaffold0081 (1 HSPs)
scaffold0081 (9-236)||(54102-54329)
[»] scaffold1712 (1 HSPs)
scaffold1712 (9-236)||(1000-1227)
[»] scaffold0345 (1 HSPs)
scaffold0345 (9-246)||(1401-1636)
[»] scaffold0058 (5 HSPs)
scaffold0058 (115-244)||(14293-14422)
scaffold0058 (9-145)||(7081-7217)
scaffold0058 (165-244)||(3304-3383)
scaffold0058 (165-244)||(4476-4555)
scaffold0058 (9-56)||(7047-7094)
[»] scaffold0004 (1 HSPs)
scaffold0004 (10-244)||(106680-106903)
[»] scaffold0564 (1 HSPs)
scaffold0564 (165-244)||(8272-8351)
[»] scaffold1454 (1 HSPs)
scaffold1454 (165-237)||(1280-1352)
[»] scaffold0477 (1 HSPs)
scaffold0477 (164-246)||(6668-6750)
[»] scaffold0002 (1 HSPs)
scaffold0002 (183-244)||(436275-436336)


Alignment Details
Target: chr6 (Bit Score: 204; Significance: 1e-111; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 32518341 - 32518576
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||    
T  32518341 catcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacattacac 32518440  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  32518441 gtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggatgaa 32518540  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||||||||||||| ||||    
T  32518541 attggccgatttttcaaaattcaaggacgaatttga 32518576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 9 - 236
Target Start/End: Original strand, 3480501 - 3480728
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  3480501 catcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagagattaacgtgacac 3480600  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  3480601 gtcacctccgttaacagaccaaattaacggagggactaatttgattgacattttgtaaattcagggactagtttgatatttcgaaaaattcagggacgaa 3480700  T
Q  209 attggccgatttttcaaaattcaaggac 236  Q
    ||||||||||||||||||||||||||||    
T  3480701 attggccgatttttcaaaattcaaggac 3480728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 26 - 236
Target Start/End: Complemental strand, 32454476 - 32454266
Alignment:
Q  26 gaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaa 125  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||     
T  32454476 gaaattttgtgtaaatcaatcagtttggtctctgcttgcgtggcatctgacgtggtaagctttgttagaggttaacgtgacacgtcacctccgttaacag 32454377  T
Q  126 accaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaa 225  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  32454376 accaaattaacggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcaaggacgaaattggccgatttttcaa 32454277  T
Q  226 aattcaaggac 236  Q
    |||||||||||    
T  32454276 aattcaaggac 32454266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 18644948 - 18645182
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||  |||||||||||||||||| |||     
T  18644948 catcaatttggtccttggaaattttgtgtaaatcgatcagtttggtccctgcttgcgtgacatctaacgtggtaagttttgtcagaggttaacgttacat 18645047  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |    
T  18645048 gtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcatggactaatttgatatttcgcaaaattcagagacg-a 18645146  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||| |||||||||||||||||||||||||| ||||    
T  18645147 attgtccgatttttcaaaattcaaggacgaatttga 18645182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 11357040 - 11357275
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||| |||||| ||||||||||||| ||||||| ||||||||||| ||||||||||||||| | |||| |||||||||||| ||||    
T  11357040 catcaatttggtccttggcaattttctgtaaatcaatcaatttggtctctgcttgcgtgacatctgacgtggtaagccttgtaagaggttaacgttacac 11357139  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    |||   |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||  |||||||||||||||||    
T  11357140 gtca--tccgttaacagaccaacttaacggagggactgatttgaatgacattttgtaaattcagggactaaattgctatttttcaaaattcagggacgaa 11357237  T
Q  209 attggccgatttttcaaaattcaaggacgaaattgatg 246  Q
     ||| ||||||||| |||||||||||||||| ||||||    
T  11357238 tttgaccgattttttaaaattcaaggacgaatttgatg 11357275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 10 - 244
Target Start/End: Original strand, 9399880 - 9400114
Alignment:
Q  10 atcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacg 109  Q
    ||||||||| || |||  |||||| ||||||||||||| || |||||||||||||||||||||| ||||||||| | |||| |||||||||||| |||||    
T  9399880 atcaatttgatccttgacaattttctgtaaatcaatcaattaggtccctgcttgcgtggcatctaacgtggtaagccttgtaagaggttaacgttacacg 9399979  T
Q  110 tcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaa 209  Q
    || |||| ||||||| ||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||| ||| |||     
T  9399980 tcacctctgttaacagaccaacttaacggagagactgatttgattgatattttgtaaattcggggactaattagatatttcgcaaaattcaaggatgaat 9400079  T
Q  210 ttggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||| | |||||||||||||||||||||||| ||||    
T  9400080 ttgactgatttttcaaaattcaaggacgaatttga 9400114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 20525178 - 20525413
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    |||||||||||||||||| ||| || ||||||||||||| ||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||  ||     
T  20525178 catcaatttggtcattggcaatgttctgtaaatcaatcaatttggtccctgcttgtgtggcatctgacgtggtaagccttgtaagaggttaacgttgcat 20525277  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| || | | ||||| |||||||||||||| |||    
T  20525278 gtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcaaggacaaaatagctattttgcaaaattcagggatgaa 20525377  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
     ||| || |||||| ||||||||| |||||| ||||    
T  20525378 tttgacctatttttaaaaattcaaagacgaatttga 20525413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 232
Target Start/End: Complemental strand, 32437372 - 32437162
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  32437372 catcaatttggtcctcggaaatgttgtgtaaatcaatcagtttggtccctgcttgcgtggtatctgacgtggtaagctttgtcagaggttaacgttacac 32437273  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    |||  ||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||             | |||||||||||||||||||||||    
T  32437272 gtcatctccgttaacataccaacttaacggagggattgatttgattggcattttgtaaattc-------------aaatttcgcaaaattcagggacgaa 32437186  T
Q  209 attggccgatttttcaaaattcaa 232  Q
    ||||||||||||||||||||||||    
T  32437185 attggccgatttttcaaaattcaa 32437162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 239
Target Start/End: Complemental strand, 13610925 - 13610705
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| ||||||||||| |||||||||||     ||||    | ||||||| ||||||||||||||| | |||| || ||||||||| ||||    
T  13610925 catcaatttggtccttggaaattttttgtaaatcaat-----tggt----gtttgcgtgtcatctgacgtggtaagccttgtaaggggttaacgttacac 13610835  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||    
T  13610834 gtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaatt-atggactaatttgatatttcgcaaaattcagggacaaa 13610736  T
Q  209 attggccgatttttcaaaattcaaggacgaa 239  Q
     |||  |||||||||||||||||||||||||    
T  13610735 tttgatcgatttttcaaaattcaaggacgaa 13610705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 10 - 244
Target Start/End: Original strand, 6902743 - 6902976
Alignment:
Q  10 atcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacg 109  Q
    |||||||| ||| |||  |||||| ||||||||||||| ||||||| ||||||||||| |||||||||||||||   |||| |||||||||||  |||||    
T  6902743 atcaatttagtccttgacaattttctgtaaatcaatcaatttggtctctgcttgcgtgacatctgacgtggtaagtcttgtaagaggttaacggtacacg 6902842  T
Q  110 tcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaa 209  Q
    || |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||  ||||||| | |||| ||||||||||| |||||||||     
T  6902843 tcacctccgttaacagaccaacttaacggagggactgatttgatggacattttgtaaattcgaggactaaatagata-ttcgcaaaatttagggacgaat 6902941  T
Q  210 ttggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||| | ||||||| |||||||||||||||| ||||    
T  6902942 ttgactgatttttgaaaattcaaggacgaatttga 6902976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 10 - 244
Target Start/End: Original strand, 10569764 - 10569998
Alignment:
Q  10 atcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacg 109  Q
    |||||||||||| |||| |||||| ||||||||||||| |||| ||||||||||||||||||||||| |||||| |   || ||||||||||   |||||    
T  10569764 atcaatttggtctttggcaattttctgtaaatcaatcaatttgatccctgcttgcgtggcatctgacatggtaagccacgtaagaggttaacagtacacg 10569863  T
Q  110 tcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaa 209  Q
    || |||||||||||| ||||| || ||||||||||||||||||| ||||||||||||||||  ||||||| | ||||||| |||||||||| |||||||     
T  10569864 tcacctccgttaacagaccaatttgacggagggactgatttgatggacattttgtaaattcgaggactaaatagatattttgcaaaattcatggacgaat 10569963  T
Q  210 ttggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||| ||||||| |||||||||||||||| ||||    
T  10569964 ttggctgattttttaaaattcaaggacgaatttga 10569998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 38 - 244
Target Start/End: Complemental strand, 7371391 - 7371185
Alignment:
Q  38 aaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaaccaacttaacg 137  Q
    ||||| |||| |||||||||||||||||||| ||||||||||||||   || | ||||||||| || ||||||| ||||| |||||| |||||||||| |    
T  7371391 aaatccatcaatttggtccctgcttgcgtggtatctgacgtggtaagtcttataagaggttaatgttacacgtcacctcctttaacagaccaacttaaag 7371292  T
Q  138 gagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacg 237  Q
    ||||||||||||||||||||||||| |||||||| |||| || |   ||||||||||||||||||||| || ||||||||||||| ||||||||||||||    
T  7371291 gagggactgatttgattgacattttataaattcaaggacaaaatatctatttcgcaaaattcagggaccaatttggccgatttttgaaaattcaaggacg 7371192  T
Q  238 aaattga 244  Q
    || ||||    
T  7371191 aagttga 7371185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 10 - 244
Target Start/End: Complemental strand, 21068869 - 21068635
Alignment:
Q  10 atcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacg 109  Q
    |||||||||||| |||| |||||| | ||||||||||| |||||||| ||||||||||  |||||||||||||| | |||| |||| |||||   |||||    
T  21068869 atcaatttggtccttggcaattttctataaatcaatcaatttggtccttgcttgcgtgatatctgacgtggtaagccttgtaagagattaacagtacacg 21068770  T
Q  110 tcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaa 209  Q
    || ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||  ||||||| | ||||||||| ||||||   |||||||     
T  21068769 tcacctccgttaacaggccaacttaacggagggactgatttgattgacattttgtaaattcgaggactaaatagatatttcgtaaaatttgtggacgaat 21068670  T
Q  210 ttggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||| | |||| || |||||||||||||||| ||||    
T  21068669 ttgactgattgttgaaaattcaaggacgaatttga 21068635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 28 - 198
Target Start/End: Complemental strand, 33267287 - 33267117
Alignment:
Q  28 aattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaac 127  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||| ||||||||||   ||||||| ||||||||||||  |    
T  33267287 aattttgtgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaagccttgtaagaggttaacactacacgtcacctccgttaacaggc 33267188  T
Q  128 caacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaatt 198  Q
    ||| |||||||| |||||||||||||||||||||| ||||||| || ||||| | ||||||||||||||||    
T  33267187 caatttaacggaaggactgatttgattgacattttataaattcgggaactaaatagatatttcgcaaaatt 33267117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 10 - 232
Target Start/End: Original strand, 7051090 - 7051312
Alignment:
Q  10 atcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacg 109  Q
    ||||||||| || |||| |||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||| ||||||||||   |||||    
T  7051090 atcaatttgttccttggcaattttctgtaaatcaatcaatttggtccctgcttgcgtgacatctgacgtggtaagccttgtaagaggttaacagtacacg 7051189  T
Q  110 tcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaa 209  Q
    || |||||||||||| |||||||||| ||||||||| ||||  | || ||||| |||||||  | ||||| | ||||||||||||||||||| ||||||     
T  7051190 tcacctccgttaacagaccaacttaatggagggactaatttagtggatattttataaattcgagtactaaatagatatttcgcaaaattcagagacgaat 7051289  T
Q  210 ttggccgatttttcaaaattcaa 232  Q
    ||| | ||||||| |||||||||    
T  7051290 ttgactgattttttaaaattcaa 7051312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 10 - 191
Target Start/End: Complemental strand, 21091338 - 21091157
Alignment:
Q  10 atcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacg 109  Q
    |||||||||||| |||  |||||| | ||||||||||| ||| |||| |||||||||| ||||||||||||||| | |||| |||| |||||   |||||    
T  21091338 atcaatttggtccttgacaattttctataaatcaatcaatttagtccatgcttgcgtgacatctgacgtggtaagccttgtaagagattaacagtacacg 21091239  T
Q  110 tcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcg 191  Q
    || ||||||||||||  ||||||||| |||||||||||||||||||||||||| ||||||| |||||||| | |||||||||    
T  21091238 tcacctccgttaacaggccaacttaatggagggactgatttgattgacattttataaattcggggactaaatagatatttcg 21091157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 198
Target Start/End: Complemental strand, 21045554 - 21045366
Alignment:
Q  10 atcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacg 109  Q
    |||||||||||| |||  ||||||   ||||||||||| |||||||||||||||||||  |||||||||||||| | |||| |||| |||||   |||||    
T  21045554 atcaatttggtccttgacaatttttaataaatcaatcaatttggtccctgcttgcgtgatatctgacgtggtaagccttgtaagagattaacagtacacg 21045455  T
Q  110 tcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaatt 198  Q
    || ||||| ||| ||  | ||||||||||| |||||||||||||||||||||||||||||| |||||||| | ||||||||| ||||||    
T  21045454 tcacctccattaccaggctaacttaacggatggactgatttgattgacattttgtaaattcggggactaaatagatatttcgtaaaatt 21045366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 3456867 - 3456766
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3456867 acggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaagg 3456768  T
Q  235 ac 236  Q
    ||    
T  3456767 ac 3456766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 13613587 - 13613691
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    ||||||||||| ||||||| ||| | |   |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  13613587 acggagggactaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaatttgaccgatttttcaaaattcaagg 13613686  T
Q  235 acgaa 239  Q
    |||||    
T  13613687 acgaa 13613691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 135 - 236
Target Start/End: Original strand, 32455896 - 32455997
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    ||||||||||||||||||| ||| | |   |||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  32455896 acggagggactgatttgatggacgtctgcaaaattcagtgactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaagg 32455995  T
Q  235 ac 236  Q
    ||    
T  32455996 ac 32455997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 32439126 - 32439193
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaa 232  Q
    ||||||||||||||| | |||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  32439126 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaa 32439193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 244
Target Start/End: Complemental strand, 33276917 - 33276811
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    ||||||| |||||||||||||||||||| |||||||||   |||| | |||||||||||||||| ||  ||||| ||| | ||||||| |||||||||||    
T  33276917 acggaggaactgatttgattgacattttataaattcag---ctaaatagatatttcgcaaaatttagaaacgaatttgactgattttttaaaattcaagg 33276821  T
Q  235 acgaaattga 244  Q
    ||||| ||||    
T  33276820 acgaagttga 33276811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 14337862 - 14337685
Alignment:
Q  57 ctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaaccaacttaacggagggactgatttgattga 156  Q
    ||||||||||| |||||||| |||||| ||| || |||||||||    ||| ||| |||| |||||||  ||||||||| ||||||||||||||||||||    
T  14337862 ctgcttgcgtgacatctgacatggtaagctt-gtaagaggttaatagtacatgtcacctctgttaacaggccaacttaatggagggactgatttgattga 14337764  T
Q  157 cattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagga 235  Q
     ||||||||||||| || |  |||| || |||| ||||||||   |||  || ||||| ||||||  ||||||||||||    
T  14337763 tattttgtaaattcgggaatgaattagacattttgcaaaatttgaggataaatttggctgattttaaaaaattcaagga 14337685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 20523455 - 20523374
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    ||||||||||||||| | |||||||||||||||||| ||||||| ||| ||||||||| ||||||| |||| ||| ||||||    
T  20523455 aaattcagggactaaatagatatttcgcaaaattcaaggacgaatttgaccgatttttgaaaattctaggaagaatttgatg 20523374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 10568488 - 10568407
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    ||||||||||||||| |  ||||||||| ||||||| ||||||| ||| | ||||||| |||||||||||||||| ||||||    
T  10568488 aaattcagggactaaataaatatttcgctaaattcaaggacgaatttgactgatttttgaaaattcaaggacgaatttgatg 10568407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 246
Target Start/End: Complemental strand, 17950674 - 17950569
Alignment:
Q  141 ggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaa 240  Q
    ||||||| |||||||||||||   ||||||||||| ||| ||||||||||||| |||| ||||||||| ||||||||    | |||||||| ||| ||||    
T  17950674 ggactgacttgattgacatttaacaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggatgaaa 17950575  T
Q  241 ttgatg 246  Q
    ||||||    
T  17950574 ttgatg 17950569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 7372993 - 7373060
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaa 232  Q
    ||||||||||||||| |  ||||||||||||||||||||||||| ||| || |||||| |||||||||    
T  7372993 aaattcagggactaaataaatatttcgcaaaattcagggacgaatttgaccaatttttaaaaattcaa 7373060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 35175898 - 35175979
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    |||||||||||||| ||||||||||||  |||||  | |||||| |||||||||   | |||||||||||||||||||||||    
T  35175898 aaattcagggactattttgatatttcgttaaatttggagacgaatttggccgatccctgaaaattcaaggacgaaattgatg 35175979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 3018467 - 3018519
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 217  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||| ||||||||    
T  3018467 aaattcagggactaagttgatatttcgcataattgagggacgaagttggccga 3018519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 11355311 - 11355232
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||| | | | ||||||||  ||||||||| |||||| ||| ||||||||| |||||||||||||||| ||||    
T  11355311 aaattcagggagttaatagatatttcataaaattcagtgacgaatttgaccgattttttaaaattcaaggacgaatttga 11355232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 18644914 - 18644961
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||||||||    
T  18644914 catcaatttggtccttggaaattttgtgtaaatccatcaatttggtcc 18644961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 32516938 - 32516887
Alignment:
Q  193 aaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||||||||||| ||| ||||||||| |||||||||||||||| ||||    
T  32516938 aaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttga 32516887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 32518307 - 32518354
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||||||||    
T  32518307 catcaatttggtccttggaaattttgtgtaaatccatcaatttggtcc 32518354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 14338510 - 14338584
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaa 239  Q
    |||||||||||  |||| || |||||||||||||   ||||||| ||||| ||||||| ||||||||||||||||    
T  14338510 aaattcagggatgaattagacatttcgcaaaatttgaggacgaatttggctgatttttaaaaattcaaggacgaa 14338584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 8605351 - 8605404
Alignment:
Q  191 gcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||| ||||||||| ||||| ||||||| |||||||||||||||| ||||    
T  8605351 gcaaaatttagggacgaatttggctgatttttgaaaattcaaggacgaatttga 8605404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 17952077 - 17952158
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    |||||||||||||| ||||||||||||  |||||  |||||||| ||||||||    | |||||||| ||||||||||||||    
T  17952077 aaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcagggacgaaattgatg 17952158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 236
Target Start/End: Complemental strand, 6899574 - 6899503
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggac 236  Q
    ||||| ||||||||| | |||||||| ||||||| || |||||| ||| | ||||||| |||||||||||||    
T  6899574 aaatttagggactaaatagatatttcacaaaatttagagacgaatttgactgatttttgaaaattcaaggac 6899503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 7049847 - 7049796
Alignment:
Q  193 aaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||||||||||| ||||| ||||||| |||||||||||| ||| ||||    
T  7049847 aaaattcagggacgaatttggctgatttttgaaaattcaaggaagaatttga 7049796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 246
Target Start/End: Complemental strand, 4641445 - 4641363
Alignment:
Q  164 taaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    |||||||||||| ||| |||||||||| || |||| ||||||||| ||||||||    | |||||||| |||| |||||||||    
T  4641445 taaattcagggattaaattgatatttcacataattgagggacgaatttggccgacccgtgaaaattcagggactaaattgatg 4641363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 2968229 - 2968180
Alignment:
Q  164 taaattcagggactaatttgatatttcgcaaaattcagggacgaaattgg 213  Q
    |||||||||||| ||| ||||||||||||| |||| ||||||||| ||||    
T  2968229 taaattcagggattaaattgatatttcgcataattgagggacgaatttgg 2968180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 201
Target Start/End: Complemental strand, 9398749 - 9398713
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcag 201  Q
    ||||||||||||||| | |||||||||||||||||||    
T  9398749 aaattcagggactaaatagatatttcgcaaaattcag 9398713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 204; Significance: 1e-111; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 46309052 - 46308817
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  46309052 catcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacac 46308953  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46308952 gtcacctccgttaacaggccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 46308853  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||||||||||||| ||||    
T  46308852 attggccgatttttcaaaattcaaggacgaatttga 46308817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 38193354 - 38193589
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  38193354 catcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacat 38193453  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38193454 gtcacctccgttaacagaccaacttaacggatggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 38193553  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||||||||||||| ||||    
T  38193554 attggccgatttttcaaaattcaaggacgaatttga 38193589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 53092868 - 53092633
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  53092868 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgttacac 53092769  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  53092768 gtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttataaattcagggattaatttgatatttcgcaaaattcagggacgaa 53092669  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||| ||||||||||||| || |||||| ||||    
T  53092668 attggccaatttttcaaaatttaaagacgaatttga 53092633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 7883573 - 7883338
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  7883573 catcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgttacac 7883474  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||| |||||||||    
T  7883473 gtcacctccgttaacagaccaacttaacggagggactgatttgattgaaattttgtaaattcaggaactaatttgatatttcacaaaatttagggacgaa 7883374  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||||||||||||||||||| |||||||||||    
T  7883373 attggccgatttttcaaaattcaaagacgaaattga 7883338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 41979196 - 41979431
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  41979196 catcaatttggtcctcgaaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgttacac 41979295  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41979296 gtcacctccgttaacagaccaacttaacggagggattgatttgattgaaattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 41979395  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||||||||||||| ||||    
T  41979396 attggccgatttttcaaaattcaaggacgaatttga 41979431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 46310280 - 46310515
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  46310280 catcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacac 46310379  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46310380 gtcacctccgttaacagaccaacttaacggagggactggtttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 46310479  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||| ||||||||||||||||||| |||||| ||||    
T  46310480 attgaccgatttttcaaaattcaaagacgaatttga 46310515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 3150497 - 3150262
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  3150497 catcaatttggtccttggaaattttgtgtaaatcaatcagtttggtctccgcttgcgtggcatctgacgtggtaatctttgtcagaggttaacgttacac 3150398  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| | |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3150397 gtcacatccgttaacagaccaacttaatggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 3150298  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||| |||||||||||||||||||||||||| ||||    
T  3150297 attgaccgatttttcaaaattcaaggacgaatttga 3150262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 46609394 - 46609159
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  46609394 catcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccctgcttgcgtgacatctgacgtggtaagctttgtcagaggttaacgtgacac 46609295  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  46609294 gtcacctccattaacaaaccaacttaacgtagggactgatttgattgacattttgtaaattcagggactaatttgatatttcacaaaattcagggacgaa 46609195  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||||||| ||||| ||||    
T  46609194 attggccgatttttcaaaattcaagaacgaatttga 46609159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 53094117 - 53094352
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || |||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  53094117 catcaatttcgtccttcgaaattttgtgtgaatcaatcagtttggtcactgcttgcgtgacatctgacgtggtaagctttgtcagaggttaacgtgacac 53094216  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53094217 gtcacctccgttaacagaccaacttaacggagggactcatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 53094316  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||||||||||||| ||||    
T  53094317 attggccgatttttcaaaattcaaggacgaatttga 53094352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 54899918 - 54900153
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||||| ||||    
T  54899918 catcaatttggtccttgaaaattttgtgtaaatcaatcagtttggtctctgcttgcgtggcatttgacgtggtaagctttgtcagacgttaacgttacac 54900017  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  54900018 gtcacctccgttaacataccaacttaacggagggactgatttgattgacattttgtaaattcagggacaaatttgatatttcgcaaaattcagggacgaa 54900117  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||||||||||||| ||||    
T  54900118 attggccgatttttcaaaattcaaggacgaatttga 54900153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 9 - 236
Target Start/End: Complemental strand, 53187987 - 53187760
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  53187987 catcaatttggtccttggaaattttgtgtaaatcaatcagtttggtctccgcttgcgtggcatctgacgtggtaatctttgtcagaggttaacgttacac 53187888  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| ||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53187887 gtcacctccgttaccagatcaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 53187788  T
Q  209 attggccgatttttcaaaattcaaggac 236  Q
    |||| |||||||||||||||||||||||    
T  53187787 attgaccgatttttcaaaattcaaggac 53187760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 9 - 236
Target Start/End: Complemental strand, 35904070 - 35903843
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  35904070 catcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgatgtggtaagctttgtcagaggttaacgttacac 35903971  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  35903970 gtcacctccgttaacagaccaacttaatggagggactaatttgattgacattttgtaaattcagggactaatttgatattttgcaaaattcagggatgaa 35903871  T
Q  209 attggccgatttttcaaaattcaaggac 236  Q
    |||||| |||||||||||||||||||||    
T  35903870 attggctgatttttcaaaattcaaggac 35903843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 8 - 244
Target Start/End: Original strand, 44795733 - 44795969
Alignment:
Q  8 tcatcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgaca 107  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||    
T  44795733 tcatcaatttggtccttggaaattttgtgtaaatcaatcagtttgatccctgcttgcgtggcatcttacgtggtaagctttgtcagaggttaacgttaca 44795832  T
Q  108 cgtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacga 207  Q
    |||| ||||| |||||| |||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  44795833 cgtcacctccattaacagaccaacttaacggagggactgatttgtttgatattttgtaaattcatggactaatttgatatttcgcaaaattcaggaacga 44795932  T
Q  208 aattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  44795933 aattagccgatttttcaaaattcaaggacgaatttga 44795969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 2661752 - 2661987
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||| ||||    
T  2661752 catcaatttggtccttggaaattttgtgtaaatcaattagtttggtccctgcttgcatggcatatgacgtggtaagctttgtcagaggttaacgttacac 2661851  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  2661852 gtcacctctgttaacagaccaacttaatggagggactgatttgattgacattttgtaaattcatggactaatttgatatttcgcaaaattcacggacgaa 2661951  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||| ||||||||||||||||||||||||| ||||    
T  2661952 attggtcgatttttcaaaattcaaggacgaatttga 2661987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 46611147 - 46611382
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  46611147 catcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccttgcttgcatggcatctgacgtggtaagctttgtcagaggttaacgtgacac 46611246  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| ||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  46611247 gtcacctccgttaacaggccaacttaacggagggactgatttgattgacattttataaattcagggactaatttgatatttcgcaaaattcagggacgaa 46611346  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||| |  ||||||||||||||||||||||| ||||    
T  46611347 attgacaaatttttcaaaattcaaggacgaatttga 46611382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 9 - 236
Target Start/End: Complemental strand, 28626656 - 28626429
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  28626656 catcaatttagtccttcgaaattttgtgtaaatccatcaatttggtccctgcttgcgtggcatctgacgtggtacgctttgtcagaggttaacgtgacac 28626557  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  28626556 gtcacctccgttaacagaccaatttaacggagggactaatttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacgaa 28626457  T
Q  209 attggccgatttttcaaaattcaaggac 236  Q
    |||| |||||||||||||||||||||||    
T  28626456 attgaccgatttttcaaaattcaaggac 28626429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 2378827 - 2379062
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    |||||||||||||||||| |||||| | ||||||||||| ||||||||||||||||||| ||||||||||||||| || ||| ||| |||||| | ||||    
T  2378827 catcaatttggtcattggcaattttctttaaatcaatcaatttggtccctgcttgcgtgacatctgacgtggtaagctatgtaagatgttaacattacac 2378926  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | | ||||| ||||||||||||||||||    
T  2378927 gtcacctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcaaggactaaatagctattttgcaaaattcagggacgaa 2379026  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||| ||||||||| |||||||||||||||| ||||    
T  2379027 attgaccgattttttaaaattcaaggacgaatttga 2379062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 611066 - 611301
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| |||| |||||| ||||||||||||| |||| |||||||||||||||||||| ||||||||||| |||| |||||||||||| ||||    
T  611066 catcaatttagtccttggcaattttctgtaaatcaatcaatttgatccctgcttgcgtggcatctaacgtggtaaaccttgtaagaggttaacgttacac 611165  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||| | | ||||||| ||||||||||||||||    
T  611166 gtcacctccgttaacagaccaacttaacggagggactaatttgattgacattttgtaaattcaggggctaaatagctatttcgaaaaattcagggacgaa 611265  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
     ||||| ||||||| |||||||||||||||| ||||    
T  611266 tttggctgattttttaaaattcaaggacgaatttga 611301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 13 - 244
Target Start/End: Complemental strand, 38192124 - 38191905
Alignment:
Q  13 aatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcg 112  Q
    ||||| ||| || |||||||||||||||||||||||||||||| ||||||||||||            ||| ||||||||||||||||||||||| |||     
T  38192124 aatttcgtccttcgaaattttgtgtaaatcaatcagtttggtcactgcttgcgtgg------------taagctttgtcagaggttaacgtgacatgtca 38192037  T
Q  113 cctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattg 212  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38192036 cctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattg 38191937  T
Q  213 gccgatttttcaaaattcaaggacgaaattga 244  Q
    ||| ||||||||||||| ||||||||| ||||    
T  38191936 gccaatttttcaaaatttaaggacgaatttga 38191905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 54412391 - 54412626
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| | |||| | |||||||||| ||||    
T  54412391 catcaatttggtccttggcaattttctgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaagcattgtaaaaggttaacgttacac 54412490  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||| | ||||| |||||||||||| |||||||    
T  54412491 gtcacctccgttaacacaccaacttaatggagggactgatttgattgacattttgtaaattcaggaactaaatagatatctcgcaaaattcaaggacgaa 54412590  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
     ||| || |||||| |||||||| ||||||| ||||    
T  54412591 tttgaccaattttttaaaattcacggacgaatttga 54412626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 17516817 - 17517052
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||  |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| | |||| |||||||||||| ||||    
T  17516817 catcaatttggtccttgacaattttctgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaagccttgtaagaggttaacgttacac 17516916  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||| || |   |||||||||||||||| | |||||    
T  17516917 gtcacctccgttaatagaccaacttaacggagggactgatttgattgacattttgtaaattcaaggacaaaataactatttcgcaaaattcatgaacgaa 17517016  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
     ||| ||||||||| |||||||||||||||| ||||    
T  17517017 tttgaccgatttttgaaaattcaaggacgaatttga 17517052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 44268226 - 44267991
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||| |||||| |||||||||| || |||||||||||||| ||||||| |||||||||||||| ||||  ||||||||||| ||||    
T  44268226 catcaatttggtccttggcaattttctgtaaatcaaccaatttggtccctgcttacgtggcaactgacgtggtaaaccttgtaggaggttaacgttacac 44268127  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||| || | | ||||||||||||||||| || |||    
T  44268126 gtcacctccgttaacataccaacttaacggagggactgatttgattgacattttataaattcaaggacaaaatagctatttcgcaaaattcagagatgaa 44268027  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
     ||||||||||||| |||||||||||||||| ||||    
T  44268026 tttggccgatttttgaaaattcaaggacgaatttga 44267991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 9 - 239
Target Start/End: Complemental strand, 23291814 - 23291585
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| | |  |||||| ||||||| ||||| ||||||||||||||||||| ||||||||||||||| | |||| |||||||||||| ||||    
T  23291814 catcaatttggtcctcgacaattttctgtaaattaatcaatttggtccctgcttgcgtgacatctgacgtggtaagccttgtaagaggttaacgttacac 23291715  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||| || |||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||    
T  23291714 gtcacctctgt-aacagactaacttaacggagggactgatttgattgacattttgtaaattcagagactaaatagatatttcgcaaaattcagggacgaa 23291616  T
Q  209 attggccgatttttcaaaattcaaggacgaa 239  Q
     ||||||||||||| ||||||||||||||||    
T  23291615 tttggccgattttttaaaattcaaggacgaa 23291585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 10 - 244
Target Start/End: Original strand, 42282318 - 42282552
Alignment:
Q  10 atcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacg 109  Q
    |||||||||||| |||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||  ||| |    
T  42282318 atcaatttggtccttggcaattttctgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaaaccttgtaagaggttaacggtacatg 42282417  T
Q  110 tcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaa 209  Q
    || |||| ||||||| ||||||||||||||||||||||||| ||  |||||||||||||||| ||||||| | |||||||||||||||||||  |||||     
T  42282418 tcacctcggttaacataccaacttaacggagggactgatttaatgaacattttgtaaattcaaggactaaatagatatttcgcaaaattcagaaacgaat 42282517  T
Q  210 ttggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||| | ||||||| |||||||||||||||| ||||    
T  42282518 ttgactgatttttgaaaattcaaggacgaatttga 42282552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 30598582 - 30598347
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    |||||||||||||||||  |||||| ||||||||||||  ||||||| |||||||||||| ||||||||||| || | |||| |||| ||||||| ||||    
T  30598582 catcaatttggtcattgacaattttctgtaaatcaatctatttggtctctgcttgcgtggtatctgacgtggcaagccttgtaagagtttaacgttacac 30598483  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||| || | | ||||||||||||||||||||| ||    
T  30598482 gtcacctccgttaacataccaacttaacggagggactaatttgattgacattttgtaaattcaaggacaaaatagctatttcgcaaaattcagggacaaa 30598383  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
     ||| ||||||||| |||||||||||||||| ||||    
T  30598382 tttgaccgatttttgaaaattcaaggacgaatttga 30598347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 235
Target Start/End: Original strand, 46113949 - 46114176
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| |||  |||||| ||||||||||||| ||||||| |||||||||||||||||||| |||||||| |||| |||||||||||| ||||    
T  46113949 catcaatttagtccttgacaattttctgtaaatcaatcaatttggtctctgcttgcgtggcatctgacatggtaaaccttgtaagaggttaacgttacac 46114048  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||  |||||| | |||||||||||||||||| |||| ||    
T  46114049 gtcacctccgttaacagaccaacttaacggagtgactgatttgattgacattttgtaaattcaatgactaaatagatatttcgcaaaattcaaggacaaa 46114148  T
Q  209 attggccga-tttttcaaaattcaagga 235  Q
     |||||||| ||||| ||||||||||||    
T  46114149 tttggccgatttttttaaaattcaagga 46114176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 8 - 221
Target Start/End: Original strand, 21350448 - 21350661
Alignment:
Q  8 tcatcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgaca 107  Q
    |||||||||||||  |||| |||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||| |||||||||||| |||    
T  21350448 tcatcaatttggttcttggcaattttctgtaaatcaatcaatttggtccctgcttgcgtgacatctgacgtggtaagccttgtaagaggttaacgttaca 21350547  T
Q  108 cgtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacga 207  Q
    || | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| || | | |||||||||||||||||  ||||    
T  21350548 cgacacctccgttaacataccaacttaacggagggactgatttgattgacattttgtaaattcaaggacaaaatagctatttcgcaaaattcagtaacga 21350647  T
Q  208 aattggccgatttt 221  Q
    | ||||||||||||    
T  21350648 atttggccgatttt 21350661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 10 - 244
Target Start/End: Original strand, 51686239 - 51686473
Alignment:
Q  10 atcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacg 109  Q
    |||||||||||| |||| |||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||| |||||||||||  |||||    
T  51686239 atcaatttggtccttggcaattttctgtaaatcaatcaatttggtccctgcttgcgtgacatctgacgtggtaagctttgtaagaggttaacggtacacg 51686338  T
Q  110 tcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaa 209  Q
    || ||| |||||||| |||||||| || ||||||||||||||||  |||||||||||||||  ||||||| |  ||||||||||||||| |||||||||     
T  51686339 tcaccttcgttaacataccaacttgacagagggactgatttgatgaacattttgtaaattcgaggactaaataaatatttcgcaaaatttagggacgaat 51686438  T
Q  210 ttggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||| ||||||| |||||| ||||||||| ||||    
T  51686439 ttggctgatttttgaaaatttaaggacgaatttga 51686473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 9 - 229
Target Start/End: Complemental strand, 27897395 - 27897176
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||| |||||| ||||||||||||| |||||||||| |||||||| ||||||||||||||| |  ||| |||||||||||| ||||    
T  27897395 catcaatttggtccttggcaattttctgtaaatcaatcaatttggtccctacttgcgtgacatctgacgtggtaagccatgtaagaggttaacgttacac 27897296  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| ||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||| |||||| | | || || |||||||||| |||||||    
T  27897295 gtcacctccgttaacaaaccaacttaacggatggactaatttgattgatattttgtaaattcagagactaaatagctaatt-gcaaaattcatggacgaa 27897197  T
Q  209 attggccgatttttcaaaatt 229  Q
     |||  | |||||| ||||||    
T  27897196 tttgatccattttttaaaatt 27897176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 11 - 244
Target Start/End: Complemental strand, 48829599 - 48829366
Alignment:
Q  11 tcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgt 110  Q
    ||||||||||| |||  |||||| ||||||||||||| |||||||| |||||||||| | ||||||||||||| | |||| ||||||||||   |||| |    
T  48829599 tcaatttggtccttgacaattttctgtaaatcaatcaatttggtccttgcttgcgtgacctctgacgtggtaagccttgtaagaggttaacagtacactt 48829500  T
Q  111 cgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaat 210  Q
    | |||||||||||| ||||||||||| |||||||||||||||| |||||||||||||| |  ||||||| | |||||||||||||||||||| |  || |    
T  48829499 cacctccgttaacagaccaacttaaccgagggactgatttgatggacattttgtaaatccgaggactaaatagatatttcgcaaaattcaggaataaatt 48829400  T
Q  211 tggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||| || |||| |||||||||||||||| ||||    
T  48829399 tggctgaattttgaaaattcaaggacgaatttga 48829366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 7 - 204
Target Start/End: Original strand, 43766889 - 43767086
Alignment:
Q  7 atcatcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgac 106  Q
    ||||||||||||||| |||  ||||||  |||||||||||| ||||||||||||||||||| ||| ||||||||||| | || | |||||||||||| ||    
T  43766889 atcatcaatttggtccttgacaattttccgtaaatcaatcaatttggtccctgcttgcgtgacatttgacgtggtaagccttataagaggttaacgttac 43766988  T
Q  107 acgtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcaggga 204  Q
    || || |||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||| |||| || | | ||||| ||||||||||||||    
T  43766989 acatcacctccgttaacagaccaacgtaacggagtgactgatttgattgacattttgtaaattcaaggacaaaatagctattttgcaaaattcaggga 43767086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 2660301 - 2660222
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  2660301 aaattcaaggactaatttgatatttcgcaaaattcagggacgaaattggtcgatttttcaaaattcaaggacgaatttga 2660222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 235
Target Start/End: Original strand, 3152243 - 3152343
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    |||||||||| |||||||| ||| | |   |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  3152243 acggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaatttaagg 3152342  T
Q  235 a 235  Q
    |    
T  3152343 a 3152343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 44794296 - 44794218
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||    
T  44794296 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccga-ttttcaaaattcaaggacgaatttga 44794218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 2226207 - 2226286
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||    
T  2226207 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 2226286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 41977839 - 41977760
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||| |||||||||||||||| ||||    
T  41977839 aaattcagggactaatttgatatttcgccaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttga 41977760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 53190814 - 53190893
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||    
T  53190814 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 53190893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 27899136 - 27899215
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | |||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||| ||||    
T  27899136 aaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccgattttttaaaattcaaggacgaatttga 27899215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 54898526 - 54898447
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | |||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||| ||||    
T  54898526 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttga 54898447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 165 - 236
Target Start/End: Complemental strand, 21348812 - 21348741
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggac 236  Q
    ||||||||||||||| | |||||||||||||||||| ||||||| ||||||||||||| |||||||||||||    
T  21348812 aaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccgattttttaaaattcaaggac 21348741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 35905767 - 35905837
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagga 235  Q
    ||||||||||||||| | |||||||||||||||||||||||||| ||| ||||||||| ||||||||||||    
T  35905767 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaagga 35905837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 19987619 - 19987696
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattg 212  Q
    ||||||||||||||||||| ||| | |   ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19987619 acggagggactgatttgatggacgtgtgtaaaatttagggactaatttgatatttcgcaaaattcagggacgaaattg 19987696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 30599973 - 30600052
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | ||||||||||||||||||||||| || ||||||||||| | |||||| ||||||||| ||||    
T  30599973 aaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgatttgtaaaaatttaaggacgaatttga 30600052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 23774241 - 23774160
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||| |||||||| |  | |||||||||||||||| ||||||    
T  23774241 aaattcagggactaaattgatatttcgcataattgagggacgaatttggccgactcgtgaaaattcaaggacgaatttgatg 23774160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 17515399 - 17515320
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | ||||||||||||||||||| || ||| |||||| |||||| |||||||||||| ||| ||||    
T  17515399 aaattcagggactaaatagatatttcgcaaaattcagcgatgaatttggccaatttttaaaaattcaaggaagaatttga 17515320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 45897155 - 45897056
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| |||| ||||||||| ||||||||    | |||||||||||||||| ||||||||    
T  45897155 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcaaggacgaagttgatgat 45897056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 51684699 - 51684620
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||| ||||||| | ||||||| |||||||||||||| ||| ||||| ||||||| |||||||||||||||| ||||    
T  51684699 aaattcaaggactaaatagatattttgcaaaattcagggatgaatttggctgatttttgaaaattcaaggacgaatttga 51684620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 248
Target Start/End: Original strand, 48635362 - 48635458
Alignment:
Q  152 attgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    ||||||||||   ||||||||||| ||| ||||||||||||| |||| ||||||||| ||| |||||   | |||||||| ||||||||||||||||    
T  48635362 attgacatttaacaaattcagggattaaattgatatttcgcataattaagggacgaatttgaccgatccgtgaaaattcagggacgaaattgatgat 48635458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 2977364 - 2977447
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    ||||| ||||||| | ||||||||||||| |||| ||||| ||| ||||||||||  | |||||||||||||||| ||||||||    
T  2977364 aaatttagggactgaattgatatttcgcataattaagggatgaatttggccgattcgtaaaaattcaaggacgaatttgatgat 2977447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 43765226 - 43765147
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||  ||||| | ||||||||||||||||| || ||||| ||| ||||||||| |||||||||||||||| ||||    
T  43765226 aaattcagaaactaaatagatatttcgcaaaattccggaacgaatttgaccgatttttgaaaattcaaggacgaatttga 43765147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 46112576 - 46112497
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||| ||||||| | ||||||| ||||||||||   ||||| ||||||||||||| |||||||||||||||| ||||    
T  46112576 aaattcatggactaaatagatattttgcaaaattcaataacgaatttggccgattttttaaaattcaaggacgaatttga 46112497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 23293195 - 23293293
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaag 233  Q
    |||||||||||  |||||| ||| |||   ||||||| ||||||| | |||||||||||||||||| || |||| ||||| |||||||| |||||||||    
T  23293195 acggagggactattttgatggacgtttgtaaaattcatggactaaatagatatttcgcaaaattcaagggcgaatttggctgatttttcgaaattcaag 23293293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 23888807 - 23888888
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    |||||||||||||||  |||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||| ||||||    
T  23888807 aaattcagggactaagctgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 23888888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 40963370 - 40963483
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    ||||||||||| | ||||||||||||||  |||||||||||||| ||| ||||||||  |||||  || ||||| ||| ||||||  |  ||||||| ||    
T  40963370 acggagggactaaattgattgacattttacaaattcagggactattttcatatttcgttaaattggggaacgaatttgaccgattcatgcaaattcaggg 40963469  T
Q  235 acgaaattgatgat 248  Q
    ||||| ||||||||    
T  40963470 acgaagttgatgat 40963483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 41944665 - 41944584
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    |||||||||||||| ||||||||||||  |||||  |||||||| |||||||||   | |||||||| ||||||||||||||    
T  41944665 aaattcagggactattttgatatttcgttaaattgggggacgaatttggccgatccctgaaaattcagggacgaaattgatg 41944584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 2661718 - 2661765
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||||||||    
T  2661718 catcaatttggtccttggaaattttgtgtaaatccatcaatttggtcc 2661765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 3150531 - 3150484
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||||||||    
T  3150531 catcaatttggtccttggaaattttgtgtaaatccatcaatttggtcc 3150484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 7884927 - 7884978
Alignment:
Q  193 aaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||||||||| | ||||||||||||| |||||||||||||||| ||||    
T  7884927 aaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttga 7884978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 23887287 - 23887204
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    ||||||||||| ||| ||||||||||||| |||| ||||||||| || |||||    | |||||||||||||||| ||||||||    
T  23887287 aaattcagggattaaattgatatttcgcataattgagggacgaagttagccgacccataaaaattcaaggacgaagttgatgat 23887204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 24846494 - 24846548
Alignment:
Q  113 cctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaat 168  Q
    ||||||||||||  |||||||||||||||||||||||| |||||||||||| ||||    
T  24846494 cctccgttaacat-ccaacttaacggagggactgatttaattgacattttgaaaat 24846548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 53188021 - 53187974
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||||||||    
T  53188021 catcaatttggtccttggaaattttgtgtaaatccatcaatttggtcc 53187974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 33051451 - 33051509
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacga 207  Q
    ||||||||||||||  |||||||||||| || ||||||||| |||||||| ||||||||    
T  33051451 ttgattgacattttacaaattcagggacgaaattgatattttgcaaaatttagggacga 33051509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 53092902 - 53092856
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtc 55  Q
    ||||||||||||| |||||||||||||||||||| |||| |||||||    
T  53092902 catcaatttggtccttggaaattttgtgtaaatccatcaatttggtc 53092856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 216
Target Start/End: Complemental strand, 30501236 - 30501155
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccg 216  Q
    ||||||||||| | ||||||||||||||  ||||||||  |||| ||||||||||||  |||||  |||||||| |||||||    
T  30501236 acggagggactaaattgattgacattttacaaattcagaaactattttgatatttcgttaaattgggggacgaatttggccg 30501155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 40508946 - 40509027
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    ||||||| ||| ||| ||||||||||||| |||| ||||||||| ||||||||    | |||||||||||||||| ||||||    
T  40508946 aaattcaaggattaagttgatatttcgcataattgagggacgaatttggccgacccgtgaaaattcaaggacgaatttgatg 40509027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 45898383 - 45898464
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    ||||||| ||||||| ||||||||||||| ||||||||||| || |||| |||  | | |||||||| ||||||| ||||||    
T  45898383 aaattcaaggactaagttgatatttcgcataattcagggacaaagttggtcgacgtgtgaaaattcagggacgaatttgatg 45898464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 48633966 - 48633885
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    ||||||||||||||| ||||||||||||| |||| | ||||||| ||| ||||    | |||||||||||||||| ||||||    
T  48633966 aaattcagggactaagttgatatttcgcataattgatggacgaatttgaccgacccgtgaaaattcaaggacgaatttgatg 48633885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 51454285 - 51454366
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    |||||||  |||||||||||||||||||| |||| ||| | ||| |||||||||   | |||||||||||||||| ||||||    
T  51454285 aaattcaaagactaatttgatatttcgcataattgaggaatgaatttggccgatccgtgaaaattcaaggacgaatttgatg 51454366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 1847631 - 1847730
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||||||| ||| ||||||||| ||| |||| ||||| ||| ||||||||    | ||||||||||||| || ||||||||    
T  1847631 ttgattgacatttaacaaattcagggattaaattgatattttgcataattgagggatgaatttggccgacccgtgaaaattcaaggacaaatttgatgat 1847730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 18430308 - 18430387
Alignment:
Q  167 attcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    ||||||||||||| ||||||||||||| |||| ||||| ||| ||||| ||    | |||||||||||||||| ||||||    
T  18430308 attcagggactaagttgatatttcgcataattgagggatgaatttggctgacccgttaaaattcaaggacgaatttgatg 18430387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 28626690 - 28626643
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  28626690 catcaatttggtccttggaaattttgtgtaaatccatcaatttagtcc 28626643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 33111946 - 33111847
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| |||| ||||| ||| ||| ||||    | |||||||| ||||||| ||||||||    
T  33111946 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgagggatgaatttgaccgagccgtgaaaattcagggacgaagttgatgat 33111847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 37865489 - 37865430
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| |||| |||||||||    
T  37865489 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgagggacgaa 37865430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 38193320 - 38193367
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  38193320 catcaatttggtccttggaaattttgtgtaaatccatcaatttcgtcc 38193367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 40508598 - 40508499
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||||||| ||| |||| |||||||| |||| ||||||||| ||| ||||    | |||||||| ||||||| ||||||||    
T  40508598 ttgattgacatttaacaaattcagggattaaattgagatttcgcataattaagggacgaatttgtccgacccgtgaaaattcagggacgaagttgatgat 40508499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 42279596 - 42279517
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | ||||||| ||||||||| | |||||| |  || ||||||| ||||||||| |||||| ||||    
T  42279596 aaattcagggactaaatagatattttgcaaaattctgagacgaattgagctgatttttgaaaattcaatgacgaatttga 42279517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 44795700 - 44795747
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||  |||| ||||||||    
T  44795700 catcaatttggtccttggaaattttgtgtaaattcatcaatttggtcc 44795747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 46309086 - 46309039
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  46309086 catcaatttggtccttggaaattttgtgtaaatccatcaatttcgtcc 46309039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 46310246 - 46310293
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  46310246 catcaatttggtccttggaaattttgtgtaaatccatcaatttcgtcc 46310293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 46609428 - 46609381
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  46609428 catcaatttggtccttggaaattttgtgtaaatccatcaatttcgtcc 46609381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 53094083 - 53094130
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  53094083 catcaatttggtccttggaaattttgtgtaaatccatcaatttcgtcc 53094130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 31887487 - 31887568
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    ||||||||||||||| ||||||||||||| |||| | ||  ||| ||| |||||   | |||||||||||||||| ||||||    
T  31887487 aaattcagggactaagttgatatttcgcataattgatggttgaatttgaccgatccgtgaaaattcaaggacgaatttgatg 31887568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 31885623 - 31885555
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 217  Q
    ||||||||||||| | ||||||| | ||||| ||||||||||||| |||| ||||| ||| ||| ||||    
T  31885623 ttgattgacatttagcaaattcaagtactaaattgatatttcgcataattaagggatgaatttgaccga 31885555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 78)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 27692681 - 27692916
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  27692681 catcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatcttacgtggtaagctttgtcagaggttaacgttacac 27692780  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27692781 gtcacctccgttaacagaccaacttaacggagggactgatttaattgacattttgtaaattcagggactaatttgatattttgcaaaattcagggacgaa 27692880  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||||||||||||| ||||    
T  27692881 attggccgatttttcaaaattcaaggacgaatttga 27692916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 38548675 - 38548910
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  38548675 catcaatttggtccttgaaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgttacac 38548774  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38548775 gtcacctccgttaacagaccaacttaacggagggactgatttgattgaaattttgtaaattcagggattaatttgatatttcgcaaaattcagggacgaa 38548874  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||||||||||||| ||||    
T  38548875 attggccgatttttcaaaattcaaggacgaatttga 38548910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 9 - 239
Target Start/End: Complemental strand, 13107049 - 13106819
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  13107049 catcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgttacac 13106950  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  13106949 gtcacctccgttaacagaccaacttaacggagggactaatttgattgaaattttataaattcagggactaatttgatatttcgcaaaattcagggatgaa 13106850  T
Q  209 attggccgatttttcaaaattcaaggacgaa 239  Q
    |||||||||||||||||||||||||||||||    
T  13106849 attggccgatttttcaaaattcaaggacgaa 13106819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 9 - 239
Target Start/End: Original strand, 13283839 - 13284069
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||| ||||    
T  13283839 catcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtgacatctgacgtgataagctttgtcagaggttaacgttacac 13283938  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  13283939 gtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcatggactaatttgatatttcgcaaaattcagggacaaa 13284038  T
Q  209 attggccgatttttcaaaattcaaggacgaa 239  Q
    |||||||||||||||||||||||||||||||    
T  13284039 attggccgatttttcaaaattcaaggacgaa 13284069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 9 - 239
Target Start/End: Complemental strand, 8608483 - 8608252
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||    
T  8608483 catcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccctgcttgcgttgcatctgacgtggtaagctttgtcagaggttaacgttacac 8608384  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaa-ttcagggacga 207  Q
    ||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  8608383 gtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttataaattcagggactaatttgatatttcgcaaaatttcagggacga 8608284  T
Q  208 aattggccgatttttcaaaattcaaggacgaa 239  Q
    ||||| ||||||||||||||||||||||||||    
T  8608283 aattgaccgatttttcaaaattcaaggacgaa 8608252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 33761314 - 33761079
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  33761314 catcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccctacttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtaacac 33761215  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33761214 gtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 33761115  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||| ||||||||||||||||| |||||| ||||    
T  33761114 attggctgatttttcaaaattcaaagacgaatttga 33761079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 29237396 - 29237161
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29237396 catcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccttgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacac 29237297  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29237296 gtcacctccgttaacagaccaacttaatggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaa 29237197  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||| |||||||||||||||||||||||||| ||||    
T  29237196 attgaccgatttttcaaaattcaaggacgaatttga 29237161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 29239031 - 29239266
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  29239031 catcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccctgcttgcgtgacatctgacgtggtaagctttgtcagaggttaacgtgacac 29239130  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  29239131 gtcacctccgttaacagaccaacttaacggagggactaatttgattgatattttgtaaattcagggactaatttgatatttcgaaaaatttagggacgaa 29239230  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||||||||||||| ||||    
T  29239231 attggccgatttttcaaaattcaaggacgaatttga 29239266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 601548 - 601783
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || |||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| ||    
T  601548 catcaatttcgtccttcgaaattttctgtaaatcaatcagtttggtccctgcttgcgtggtatttgacgtggtaagctttgtcagaggttaacgtgaaac 601647  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  601648 gtcacctccgttaacagaccaacttaacggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaa 601747  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||||||||||||| ||||    
T  601748 attggccgatttttcaaaattcaaggacgaatttga 601783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 33707451 - 33707216
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||| ||||    
T  33707451 catcaatttggtccttgaaaattttgtgtaaatcaatcagtttggtccctgcttgcttgacatctgacgtggtaagctttgtcagaggttaacgttacac 33707352  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  33707351 gtcacctccgttaacagaccaacttaacggagtgactgatttgattgacattttataaattcagggactaatttgatatttcgtaaaattcagggacgaa 33707252  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||| |||||||||||||||||||||||||| ||||    
T  33707251 attgaccgatttttcaaaattcaaggacgaatttga 33707216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 35510663 - 35510898
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||| ||    
T  35510663 catcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccctgcttgcgtgacatctgacgtgttaagctttgtcagaggttaacgtgatac 35510762  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  35510763 gtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcacaaaattcaaggacgaa 35510862  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||| |||||||||||||||||||||||||| ||||    
T  35510863 attgaccgatttttcaaaattcaaggacgaatttga 35510898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 9 - 236
Target Start/End: Complemental strand, 35509459 - 35509232
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35509459 catcaatttcgtccttcgaaattttttgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacac 35509360  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| ||| ||||||||   |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35509359 gtcaccttcgttaacaggtcaacttaacggatggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 35509260  T
Q  209 attggccgatttttcaaaattcaaggac 236  Q
    |||| |||||||||||||||||||||||    
T  35509259 attgaccgatttttcaaaattcaaggac 35509232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 33762561 - 33762792
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||    |||||||||||||||    
T  33762561 catcaatttcgtccttcgaaattttgtgtgaatcaatcagtttggtccctgcttgcgtgacatctgacgtggtaagctttg----aggttaacgtgacac 33762656  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33762657 gtcacctccgttaacagaccaacttaacggagggattgatttgattgacattttgtaaattcagggactaatttgatatttcgtaaaattcagggacgaa 33762756  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||||||||||||| ||||    
T  33762757 attggccgatttttcaaaattcaaggacgaatttga 33762792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 27 - 236
Target Start/End: Original strand, 15308123 - 15308332
Alignment:
Q  27 aaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaa 126  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |    
T  15308123 aaattttgtataaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccgttaacaga 15308222  T
Q  127 ccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaa 226  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  15308223 ccaacttaacggaggggctaatttgattgacattttgtaaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaa 15308322  T
Q  227 attcaaggac 236  Q
    ||||||||||    
T  15308323 attcaaggac 15308332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 27 - 236
Target Start/End: Original strand, 15488492 - 15488701
Alignment:
Q  27 aaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaa 126  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |    
T  15488492 aaattttgtataaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccgttaacaga 15488591  T
Q  127 ccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaa 226  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  15488592 ccaacttaacggaggggctaatttgattgacattttgtaaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaa 15488691  T
Q  227 attcaaggac 236  Q
    ||||||||||    
T  15488692 attcaaggac 15488701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 27404456 - 27404228
Alignment:
Q  8 tcatcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgaca 107  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||    
T  27404456 tcatcaatttagtcattcgaaattttgtgtaaatcaatcagtttggtccctgcttgcgtgacatctgacgtggtacgctttgtcagaggttaacgtgaca 27404357  T
Q  108 cgtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacga 207  Q
    |||| |||||||||||| |||||||||||| ||||||| |||||||||||||||| |||||| |||||||| |||||||||||| | |||||||||||||    
T  27404356 cgtcacctccgttaacagaccaacttaacgaagggactaatttgattgacattttataaatttagggactattttgatatttcgaataattcagggacga 27404257  T
Q  208 aattggccgatttttcaaaattcaaggac 236  Q
    |||||||||||||||||||||||||||||    
T  27404256 aattggccgatttttcaaaattcaaggac 27404228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 42943270 - 42943505
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||| |||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||| |||||||||||| ||||    
T  42943270 catcaatttggtccttggcaattttctgtaaatcaatcaatttggtccctgcttgcgtgacatctgacgtggtaagccttgtaagaggttaacgttacac 42943369  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  42943370 gtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaaatagatatttcgcaaaattcagggacgaa 42943469  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
     ||||||||||||| |||||||||||||||| ||||    
T  42943470 tttggccgattttttaaaattcaaggacgaatttga 42943505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 9 - 236
Target Start/End: Original strand, 22273735 - 22273962
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||| |||||| ||||||||||||| ||||||||||||||| ||| ||||||||||||||| | |||| |||||||||||| ||||    
T  22273735 catcaatttggtccttggcaattttctgtaaatcaatcaatttggtccctgcttgtgtgacatctgacgtggtaagccttgtaagaggttaacgttacac 22273834  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||| ||| ||    
T  22273835 gtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaaatagatattttgcaaaattcagagacaaa 22273934  T
Q  209 attggccgatttttcaaaattcaaggac 236  Q
     ||||||||||||| |||||||||||||    
T  22273935 tttggccgattttttaaaattcaaggac 22273962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 10 - 244
Target Start/End: Complemental strand, 26238970 - 26238736
Alignment:
Q  10 atcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacg 109  Q
    |||||||||||| |||| |||||| ||||||||||||| |||||||| |||||||||| ||||||||||||||| | |||| ||||||||||   ||||     
T  26238970 atcaatttggtccttggcaattttctgtaaatcaatcaatttggtccatgcttgcgtgacatctgacgtggtaagccttgtaagaggttaacagtacaca 26238871  T
Q  110 tcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaa 209  Q
    || |||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||  ||||||| | ||||||||||||||||||||||||||     
T  26238870 tcacctccgttaacagactaacttaacggagggactgatttgatggacattttgtaaattcgaggactaaatagatatttcgcaaaattcagggacgaat 26238771  T
Q  210 ttggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||| ||||||| |||||||||||||||| ||||    
T  26238770 ttggctgatttttgaaaattcaaggacgaatttga 26238736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 28 - 233
Target Start/End: Original strand, 5037927 - 5038130
Alignment:
Q  28 aattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaac 127  Q
    |||||| ||||||||||||| |||||||| |  ||||||||||||||||||||||| | |||| |||||||||| | ||||||| |||||||||||| ||    
T  5037927 aattttctgtaaatcaatcaatttggtccat--ttgcgtggcatctgacgtggtaagccttgtaagaggttaacattacacgtcacctccgttaacagac 5038024  T
Q  128 caacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaa 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||| | ||||| ||| ||||||||| ||||    
T  5038025 caacttaacggagggactgatttgattgacattttgtaaattcagggactaaatagctatttcgcaaaattcaagaacgaatttgaccgattttttaaaa 5038124  T
Q  228 ttcaag 233  Q
    ||||||    
T  5038125 ttcaag 5038130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 10 - 239
Target Start/End: Complemental strand, 41824134 - 41823905
Alignment:
Q  10 atcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacg 109  Q
    ||||||||| || |||| |||||| ||||||||||||| ||||||||||| ||||||||| ||||||||||||| |  ||| ||||||||||   ||| |    
T  41824134 atcaatttgatccttggcaattttatgtaaatcaatcaatttggtccctgtttgcgtggcttctgacgtggtaagccatgtaagaggttaactgtacaag 41824035  T
Q  110 tcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaa 209  Q
    || |||||||||| | ||||||||||||||||||||||||||||  |||||||||||||||  ||||||| | |||||||||||||||||| ||||||||    
T  41824034 tcacctccgttaatagaccaacttaacggagggactgatttgatgaacattttgtaaattcgaggactaaatagatatttcgcaaaattcaaggacgaaa 41823935  T
Q  210 ttggccgatttttcaaaattcaaggacgaa 239  Q
    || || ||||||| ||||||||||||||||    
T  41823934 ttagctgatttttgaaaattcaaggacgaa 41823905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 10 - 244
Target Start/End: Original strand, 43261984 - 43262216
Alignment:
Q  10 atcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacg 109  Q
    |||||||||||| ||| ||||||| || |||||||||| ||||||||||||||||||| |||| |||||||||| |||||| |||||||||||  | | |    
T  43261984 atcaatttggtctttgaaaattttctgaaaatcaatcaatttggtccctgcttgcgtgacatcagacgtggtaagctttgtaagaggttaacggtagatg 43262083  T
Q  110 tcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaa 209  Q
    || ||  |||||||| ||||||||||||||| |||||||||||||||||||||||||||||  ||||||| | |||||||||||||||| |||| ||||     
T  43262084 tcacc--cgttaacagaccaacttaacggagagactgatttgattgacattttgtaaattcgaggactaaatagatatttcgcaaaatttagggtcgaat 43262181  T
Q  210 ttggccgatttttcaaaattcaaggacgaaattga 244  Q
    || || ||||||| |||||| ||||||||| ||||    
T  43262182 ttagctgatttttgaaaatttaaggacgaatttga 43262216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 10 - 236
Target Start/End: Complemental strand, 3152201 - 3151975
Alignment:
Q  10 atcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacg 109  Q
    |||||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||| |||||||||| | ||| |    
T  3152201 atcaatttagtcattggcaattttctgtaaatcaatcaatttggtccctgcttgcgtgacatctgacgtggtaaaccttgtaagaggttaacattacatg 3152102  T
Q  110 tcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaa 209  Q
    || | ||  |||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| | | ||||| | |||| |||||||| ||     
T  3152101 tcacatctattaacataccaacttaacagagggactaatttgattgacattttgtaaattaagggactaaatagctattttgaaaaactcagggacaaat 3152002  T
Q  210 ttggccgatttttcaaaattcaaggac 236  Q
    |||||| ||||||  ||||||||||||    
T  3152001 ttggccaatttttttaaattcaaggac 3151975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 28 - 244
Target Start/End: Complemental strand, 13484770 - 13484555
Alignment:
Q  28 aattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaac 127  Q
    |||||| || ||||| |||| ||||||||||||||| ||||||||||||||||||| | |||| | ||||||||||  |||||| ||| |||||| | ||    
T  13484770 aattttctgaaaatccatcaatttggtccctgcttgtgtggcatctgacgtggtaagccttgtaaaaggttaacgtt-cacgtcaccttcgttaatagac 13484672  T
Q  128 caacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaa 227  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||| || |    ||||||||||||||||||||||| ||||||||||||| ||||    
T  13484671 caacttaatggagggactgatttgattgacattttgtaaattcaaggacaaaataacaatttcgcaaaattcagggacgaatttggccgatttttgaaaa 13484572  T
Q  228 ttcaaggacgaaattga 244  Q
    ||||| |||||| ||||    
T  13484571 ttcaatgacgaatttga 13484555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 38 - 232
Target Start/End: Complemental strand, 41040936 - 41040742
Alignment:
Q  38 aaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaaccaacttaacg 137  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||   |||| |||||| ||||| ||||||| |||| ||||||| ||||||||||||    
T  41040936 aaatcaatcaatttggtccctgcttgcgtgacatctgacgtggtaagtcttgtaagaggtcaacgttacacgtcacctctgttaacagaccaacttaacg 41040837  T
Q  138 gagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaa 232  Q
    ||||||| |||||||||||||||||||||||||| |||| || | | ||||| | |||||||||  ||||| || |||||||||| |||||||||    
T  41040836 gagggaccgatttgattgacattttgtaaattcaaggacaaaatagctattttggaaaattcagaaacgaatttagccgatttttaaaaattcaa 41040742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 135 - 244
Target Start/End: Complemental strand, 27691273 - 27691164
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    |||||||||| |||||||| ||| | |   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27691273 acggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 27691174  T
Q  235 acgaaattga 244  Q
    ||||| ||||    
T  27691173 acgaatttga 27691164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 113 - 239
Target Start/End: Complemental strand, 15562564 - 15562439
Alignment:
Q  113 cctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattg 212  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| || ||||| |||||||||  ||||||| | ||||||| |||    
T  15562564 cctccgttaacagaccaacttaacggagggactgatttgattgacattttataaattc-ggaactaaattgatattttacaaaatttaaggacgaatttg 15562466  T
Q  213 gccgatttttcaaaattcaaggacgaa 239  Q
     | ||||||| ||||||||| ||||||    
T  15562465 actgatttttaaaaattcaaagacgaa 15562439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 13108391 - 13108470
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||||||||||||||||||||||||||||||||||||| | || |||||||||| |||||||||||||||| ||||    
T  13108391 aaattcagggactaatttgatatttcgcaaaattcagggacgtatttagccgattttttaaaattcaaggacgaatttga 13108470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 13282567 - 13282488
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||    
T  13282567 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 13282488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 38547317 - 38547238
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| |||||||||||||||| ||||    
T  38547317 aaattcagggactaatttgatatttcgcaaaattcatggacgtatttggccgattttttaaaattcaaggacgaacttga 38547238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 244
Target Start/End: Original strand, 33708829 - 33708937
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    |||||||||| |||||||| ||| |||   |||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||| |||||||||||    
T  33708829 acggagggacagatttgatggacgtttgtaaaattcagggactaatttaatatttcgcaaaattcagggacgaaattgaccg-ttttttaaaattcaagg 33708927  T
Q  235 acgaaattga 244  Q
    | ||| ||||    
T  33708928 atgaatttga 33708937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 8609842 - 8609921
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||| ||||    
T  8609842 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagaacgaatttga 8609921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 15305916 - 15305815
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||  | ||||||||||| |||||| || ||||||||||||||||||    
T  15305916 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattcagggacaaaattgaccaatttttcaaaattcaagg 15305817  T
Q  235 ac 236  Q
    ||    
T  15305816 ac 15305815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 15486285 - 15486184
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||  | ||||||||||| |||||| || ||||||||||||||||||    
T  15486285 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattcagggacaaaattgaccaatttttcaaaattcaagg 15486186  T
Q  235 ac 236  Q
    ||    
T  15486185 ac 15486184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 34681074 - 34681145
Alignment:
Q  173 ggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||| | |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||    
T  34681074 ggactaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaatttga 34681145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 198
Target Start/End: Complemental strand, 17807220 - 17807075
Alignment:
Q  53 gtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaaccaacttaacggagggactgatttga 152  Q
    |||| ||||| |||| |||||||| | |||| | |||| ||||||||||   ||| ||| ||||||||||||  ||||||||| |||||| ||| |||||    
T  17807220 gtccatgcttacgtgacatctgacatcgtaagccttgtaagaggttaacagtacatgtcacctccgttaacaggccaacttaatggagggtctggtttga 17807121  T
Q  153 ttgacattttgtaaattcagggactaatttgatatttcgcaaaatt 198  Q
    ||||| |||||||||||| |||||||| |  |||||| ||||||||    
T  17807120 ttgacgttttgtaaattcggggactaaataaatattttgcaaaatt 17807075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 236
Target Start/End: Original strand, 27406922 - 27407023
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    |||||| |||||||||||| ||| | |   |||||||||||||| ||| |||||||| | |||||| |||||||||||||| ||||||||||||||||||    
T  27406922 acggagagactgatttgatggacgtctgtaaaattcagggactattttaatatttcgaataattcatggacgaaattggccaatttttcaaaattcaagg 27407021  T
Q  235 ac 236  Q
    ||    
T  27407022 ac 27407023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 244
Target Start/End: Complemental strand, 42941893 - 42941784
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    |||||||||||  |||||| ||||| |   ||||||||||||||| |  ||||||| ||||||||||||||||| ||||| ||||||| |||||||||||    
T  42941893 acggagggactattttgatggacatctgtaaaattcagggactaaataaatatttctcaaaattcagggacgaatttggctgattttttaaaattcaagg 42941794  T
Q  235 acgaaattga 244  Q
    ||||| ||||    
T  42941793 acgaatttga 42941784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 9672096 - 9671992
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    ||||||| || ||||||||||| ||||||||||||| |||||||| | |||||||||||||||||| ||||||| |||   ||||  | |||||||||||    
T  9672096 acggaggaaccgatttgattgaaattttgtaaattcggggactaaatagatatttcgcaaaattcatggacgaatttgattgattggtgaaaattcaagg 9671997  T
Q  235 acgaa 239  Q
    |||||    
T  9671996 acgaa 9671992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 26242369 - 26242448
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||| |||||| | |||||||||||||||| ||||||||| ||||| ||||||| |||||||||| ||||||||||    
T  26242369 aaattcagagactaaatagatatttcgcaaaatttagggacgaatttggctgatttttgaaaattcaagaacgaaattga 26242448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 243
Target Start/End: Original strand, 29694208 - 29694395
Alignment:
Q  56 cctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaaccaacttaacggagggactgatttgattg 155  Q
    |||||||||||||||| ||||||||||||| |||| || ||||||    |||| || ||||||||||||  | |||||||| |||| |||||||||||||    
T  29694208 cctgcttgcgtggcatatgacgtggtaaaccttgtaagcggttaatagtacacatcacctccgttaacaggctaacttaacagaggaactgatttgattg 29694307  T
Q  156 acattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattg 243  Q
    | |||||  ||||| | | ||||| | ||||||| |||||| | |  || ||| || ||  |||||| |||||| |||||||||||||    
T  29694308 atattttaaaaatttaagaactaaatagatattttgcaaaaattaaagatgaatttagcttatttttgaaaatttaaggacgaaattg 29694395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 28433751 - 28433832
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    |||||||||||||| ||||||||||||  ||||| ||||||||| |||||||||  || |||||||| ||||||||||||||    
T  28433751 aaattcagggactattttgatatttcgttaaattgagggacgaatttggccgatccttgaaaattcagggacgaaattgatg 28433832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 237
Target Start/End: Original strand, 41042639 - 41042711
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacg 237  Q
    ||||||||||||||| | |||||||| |||||||||||||| || |||||| |||||| ||||||||||||||    
T  41042639 aaattcagggactaaatagatatttcacaaaattcagggacaaatttggccaattttttaaaattcaaggacg 41042711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 5036534 - 5036455
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||| ||||||| | |||||||| ||||||||||||||||| ||| | ||||||| |||||| ||||||||| ||||    
T  5036534 aaattcaaggactaaatagatatttcacaaaattcagggacgaatttgacggattttttaaaatttaaggacgaatttga 5036455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 7745167 - 7745246
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||| |||||||||| |  |||||||||||||||||| |||||| ||||| ||||||| ||||||||| |||||| ||||    
T  7745167 aaatacagggactaaataaatatttcgcaaaattcagagacgaatttggctgatttttgaaaattcaaagacgaatttga 7745246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 9184472 - 9184389
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    ||||||||||||||||||||||||||||  | ||  | |||||| ||||||||||  |  ||||||||||||||||||||||||    
T  9184472 aaattcagggactaatttgatatttcgcgtagttgggcgacgaatttggccgattcgtgcaaattcaaggacgaaattgatgat 9184389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 40019261 - 40019162
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| |||| ||||||||| ||||||||    | ||||||||| |||||| ||||||||    
T  40019261 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcaaagacgaagttgatgat 40019162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 41825699 - 41825778
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | |||||||||||||||||| ||||||| ||    ||||||| |||||||||||||||| ||||    
T  41825699 aaattcagggactaaatagatatttcgcaaaattcaaggacgaatttatttgatttttgaaaattcaaggacgaatttga 41825778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 248
Target Start/End: Original strand, 9186616 - 9186730
Alignment:
Q  134 aacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaag 233  Q
    |||||||||||| | ||||||||||| |   ||||| ||||||||||||||||||||||| ||||  |||||||  ||||| |||  ||  |||||||||    
T  9186616 aacggagggactaaattgattgacatatgccaaatttagggactaatttgatatttcgcataatttggggacgattttggctgatccttgtaaattcaag 9186715  T
Q  234 gacgaaattgatgat 248  Q
    |||| | ||||||||    
T  9186716 gacggagttgatgat 9186730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 600819 - 600770
Alignment:
Q  195 aattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  600819 aattcaaggacgaaattggctgatttttcaaaattcaaggacgaatttga 600770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 33750419 - 33750472
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgat 218  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||| |||||||||    
T  33750419 aaattcagggactaagttgatatttcgcataattgagggacgaagttggccgat 33750472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 13486154 - 13486222
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaag 233  Q
    ||||||||||||||| | ||||||||||||||| ||| ||||||  || ||||||||| ||||||||||    
T  13486154 aaattcagggactaaatagatatttcgcaaaatccagagacgaatctgaccgatttttaaaaattcaag 13486222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 31823462 - 31823561
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||| ||||| ||| ||||||||||||| |||| ||||||||| ||||||||    | |||||||| ||||||| ||||||||    
T  31823462 ttgattgacatttaacaaatttagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtgaaaattcagggacgaagttgatgat 31823561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 22272425 - 22272344
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga--tttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | |||||| ||||||||||||||||||| ||| | ||  ||||| ||||||||| |||||| ||||    
T  22272425 aaattcagggactaaatagatattacgcaaaattcagggacgaatttgactgattttttttaaaattcaaagacgaatttga 22272344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 27692648 - 27692694
Alignment:
Q  10 atcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    |||||||||||| |||||||||||||||||||| |||| ||||||||    
T  27692648 atcaatttggtccttggaaattttgtgtaaatccatcaatttggtcc 27692694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 462405 - 462486
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    ||||||| ||||||| ||||||||||||| |||| | ||| ||| ||||||||| | | ||||||||| |||||| ||||||    
T  462405 aaattcaaggactaagttgatatttcgcataattgacggatgaatttggccgatctgtaaaaattcaatgacgaatttgatg 462486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 245
Target Start/End: Complemental strand, 31821508 - 31821427
Alignment:
Q  164 taaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgat 245  Q
    ||||||| |||||||| ||||||||||||| |||| ||||||||| ||| ||||  | | |||||||| ||||||| |||||    
T  31821508 taaattctgggactaagttgatatttcgcataattgagggacgaagttgaccgacgtgtgaaaattcagggacgaatttgat 31821427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 33160183 - 33160264
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    |||||||| |||||| |||||||||| || |||| ||||| ||| ||||||||  | | |||||||||||||||| ||||||    
T  33160183 aaattcagagactaagttgatatttcacataattgagggatgaatttggccgacctgtgaaaattcaaggacgaatttgatg 33160264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 24527001 - 24526933
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 217  Q
    |||||||||||||   ||||||||||| ||| |||||||||| || |||| ||||||||| ||||||||    
T  24527001 ttgattgacatttaacaaattcagggattaaattgatatttcacataattgagggacgaagttggccga 24526933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 42894881 - 42894817
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattgg 213  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| |||| ||||||||| ||||    
T  42894881 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattaagggacgaatttgg 42894817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 461281 - 461182
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||||||| ||| ||| |||||| || |||| ||||| ||| ||||||||    | |||||||||||||||| ||||||||    
T  461281 ttgattgacatttaacaaattcagggattaaattgttatttcacataattgagggatgaatttggccgacccgtgaaaattcaaggacgaagttgatgat 461182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 601514 - 601561
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  601514 catcaatttggtccttggaaattttgtgtaaatccatcaatttcgtcc 601561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 5075457 - 5075374
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    ||||||| |||| || ||||||||||||||||||  |||||||  ||||| |||  ||  ||||||||||||||| ||||||||    
T  5075457 aaattcaaggacaaaattgatatttcgcaaaatttggggacgattttggctgatgcttgcaaattcaaggacgaagttgatgat 5075374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 12515222 - 12515147
Alignment:
Q  116 ccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcg 191  Q
    |||||||||  |||| | |||||||||||| | ||||||||||||||  |||||||| ||||| ||| ||||||||    
T  12515222 ccgttaacactccaattgaacggagggactaaattgattgacattttacaaattcagagactattttaatatttcg 12515147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 25707303 - 25707386
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    ||||||||||| ||| ||||||||||||| |||| ||||| ||| |||||||||   | |||||| ||||| ||| ||||||||    
T  25707303 aaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatgcgtaaaaatttaaggatgaacttgatgat 25707386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 29238997 - 29239044
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  29238997 catcaatttggtccttggaaattttgtgtaaatccatcaatttcgtcc 29239044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 33748437 - 33748338
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||||| | ||| ||||||||||||| |||| | ||||||| ||||||||    | |||||||| ||||||| ||||||||    
T  33748437 ttgattgacatttaacaaattcaggaattaaattgatatttcgcataattgaaggacgaagttggccgacccgtgaaaattcagggacgaagttgatgat 33748338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 33761348 - 33761301
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  33761348 catcaatttggtccttggaaattttgtgtaaatccatcaatttcgtcc 33761301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 33762527 - 33762574
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  33762527 catcaatttggtccttggaaattttgtgtaaatccatcaatttcgtcc 33762574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 35509493 - 35509446
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  35509493 catcaatttggtccttggaaattttgtgtaaatccatcaatttcgtcc 35509446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 35510629 - 35510676
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  35510629 catcaatttggtccttggaaattttgtgtaaatccatcaatttcgtcc 35510676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 44620655 - 44620754
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    ||||||| ||||||  |||||||||||| || ||||||||| ||||||||  |||||||  ||| |||||  ||  ||||||| ||||||| ||||||||    
T  44620655 ttgattgtcattttacaaattcagggacgaaattgatattttgcaaaatttggggacgattttgaccgatgcttgcaaattcagggacgaagttgatgat 44620754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 246
Target Start/End: Original strand, 31201177 - 31201259
Alignment:
Q  164 taaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    |||||||||||| ||| ||||||||||||| |||| | ||||||| ||||||||    | |||||||| |||| |||||||||    
T  31201177 taaattcagggattaaattgatatttcgcataattgatggacgaatttggccgacccgtgaaaattcagggactaaattgatg 31201259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 32822450 - 32822369
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    ||||||||||||||| |||||||||   | |||| ||||| ||| |||||||||   | |||||||||||||||| ||||||    
T  32822450 aaattcagggactaagttgatattttaaataattgagggatgaatttggccgatccataaaaattcaaggacgaagttgatg 32822369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 11719585 - 11719525
Alignment:
Q  116 ccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggac 176  Q
    |||||||||  |||||||||| ||| |||| |||||||||||||||   ||||||||||||    
T  11719585 ccgttaacatgccaacttaacagagagactaatttgattgacatttaacaaattcagggac 11719525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 27404489 - 27404457
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaat 41  Q
    ||||||||||||| |||||||||||||||||||    
T  27404489 catcaatttggtccttggaaattttgtgtaaat 27404457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 31199574 - 31199522
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 217  Q
    ||||||||||| ||| |||||||||| || |||| ||||||||| ||||||||    
T  31199574 aaattcagggattaaattgatatttctcataattaagggacgaatttggccga 31199522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 32824257 - 32824325
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 217  Q
    |||||||||||||   |||||||| || ||| ||||||||||||| |||| |||||| || ||||||||    
T  32824257 ttgattgacatttaacaaattcagtgattaaattgatatttcgcataattgagggactaatttggccga 32824325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 43507412 - 43507177
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  43507412 catcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccctgcttgcgtgacatctgacgtggtaagctttgtcagaggttaacgtgacac 43507313  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43507312 gtcacctccgttaacagtccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 43507213  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||||||||||||| ||||    
T  43507212 attggccgatttttcaaaattcaaggacgaatttga 43507177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 43508497 - 43508732
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43508497 catcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacac 43508596  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| ||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43508597 gtcaccttcgttaacaggccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 43508696  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||||||||||||| ||||    
T  43508697 attggccgatttttcaaaattcaaggacgaatttga 43508732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 51013730 - 51013965
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  51013730 catcaatttggtccttggaaattttgtgtaaattaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgttacac 51013829  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  51013830 gtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcagggactcatttgatattttgcaaaattcagggacgaa 51013929  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||| |||||||||||||||||||||||||| ||||    
T  51013930 attgaccgatttttcaaaattcaaggacgaatttga 51013965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 4173584 - 4173819
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  4173584 catcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagatgttaacgtgacac 4173683  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| ||||||||||||  ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4173684 gtcacctccgttaacaggccaacttaacggagggactgagttgattgacgttttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 4173783  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||||||||||||| ||||    
T  4173784 attggccgatttttcaaaattcaaggacgaatttga 4173819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 33265854 - 33266089
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33265854 catcaatttcgtccttcgaaattttatgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacac 33265953  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33265954 gtcacctccgttaacagactaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcaggaacgaa 33266053  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||| ||||||||||||||||||||| ||||| ||||    
T  33266054 attagccgatttttcaaaattcaagaacgaatttga 33266089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 319518 - 319283
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||    
T  319518 catcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccctgcttgcgtgacatctgacgtggtaagttttgtcagaggttaacgtgacac 319419  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  319418 gtcacctctgttaacagaccaacttaacggagggactggtttgattgacattttgtaaattcaggaactaatttgatatttcgcaaaattcagggacgaa 319319  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||| |||||||||||||||||||||||||| ||||    
T  319318 attgaccgatttttcaaaattcaaggacgaatttga 319283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 320744 - 320979
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  320744 catcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacac 320843  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| ||||||||||||  ||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||| ||| |||    
T  320844 gtcacctccgttaacaggccaacttaacggagggactgagttgattgacattttgtaatttcaaggactaatttgatatttcgcaaaattcaaggatgaa 320943  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||||||||||||| ||||    
T  320944 attggccgatttttcaaaattcaaggacgaatttga 320979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 27 - 244
Target Start/End: Complemental strand, 33264609 - 33264392
Alignment:
Q  27 aaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaa 126  Q
    |||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |    
T  33264609 aaattttgcgtaaatcaatcagtttggtccatgcttacgtggcatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccgttaacaga 33264510  T
Q  127 ccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaa 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  33264509 ccaacttaacggagggactgatttgattgacattttgtaaattcaggaactaatttgatattttgcaaaattcagggacgaaattgaccgatttttcaaa 33264410  T
Q  227 attcaaggacgaaattga 244  Q
    ||||||||||||| ||||    
T  33264409 attcaaggacgaatttga 33264392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 9 - 236
Target Start/End: Original strand, 5439491 - 5439718
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  5439491 catcaatttagtccttcgaaattttgtgtaaatccatcaatttggtccctgcttgcgtggcatctgacgtggtacgctttgtcagaggttaacgtgacac 5439590  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  5439591 gtcacctccgttaacagaccaatttaacggagggactaatttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacgaa 5439690  T
Q  209 attggccgatttttcaaaattcaaggac 236  Q
    ||||||||||||||||||||||||||||    
T  5439691 attggccgatttttcaaaattcaaggac 5439718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 9 - 236
Target Start/End: Complemental strand, 833468 - 833241
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || ||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  833468 catcaatttagtccttcgaaattttgtgtaaattcatcaatttggtccctgcttgcgtggcatctgacgtggtacgctttgtcagaggttaacgtgacac 833369  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  833368 gtcacctccgttaacagaccaatttaacggagggactaatttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacgaa 833269  T
Q  209 attggccgatttttcaaaattcaaggac 236  Q
    ||||||||||||||||||||||||||||    
T  833268 attggccgatttttcaaaattcaaggac 833241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 9 - 233
Target Start/End: Original strand, 43520953 - 43521177
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  43520953 catcaatttggtccttgaaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtaacac 43521052  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| ||| |||||||| | |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||    
T  43521053 gtcacctacgttaacagaacaacttaacggaagaactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcaaaaacgaa 43521152  T
Q  209 attggccgatttttcaaaattcaag 233  Q
    |||| | ||||||||||||||||||    
T  43521153 attgactgatttttcaaaattcaag 43521177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 9 - 236
Target Start/End: Complemental strand, 5438056 - 5437829
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || ||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||    
T  5438056 catcaatttagtccttcgaaattttgtgtaaatccatcaatttggtccctgcttgcgtggcatctgacgtgttacgctttgtcagaggttaacgtgacac 5437957  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  5437956 gtcacctccgttaacagaccaatttaacggagggactaatttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacgaa 5437857  T
Q  209 attggccgatttttcaaaattcaaggac 236  Q
    ||| ||||||||||||||||||||||||    
T  5437856 atttgccgatttttcaaaattcaaggac 5437829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 9 - 236
Target Start/End: Original strand, 834886 - 835113
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  834886 catcaatttagtccttcgaaattttgtgtaaatccatcaatttggtccctgcttgcgtggcatctgacgtggtacgctttgtcagaggttaacgtgacac 834985  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| ||||| |||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||| | ||||||||||| ||    
T  834986 gtcacctccgttaacagaccaatttaacggagggactaatttgattgacgttttgtaaattcagggactattttgatatttcgaataattcagggacaaa 835085  T
Q  209 attggccgatttttcaaaattcaaggac 236  Q
    ||||| ||||||||||||||||||||||    
T  835086 attggtcgatttttcaaaattcaaggac 835113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 35401994 - 35401759
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||  |||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||  ||||| |||||||||||| ||||    
T  35401994 catcaatttggtgcttggcaattttctgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaaggtttgtaagaggttaacgttacac 35401895  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| |||||||||||||||||    
T  35401894 gtcacctccgttaacagaccagcttaacggagggactgatttgattgacattttgtaaattcaaggactaaatagatatttcacaaaattcagggacgaa 35401795  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
     ||||||||||||| |||||||||||||||| ||||    
T  35401794 tttggccgattttttaaaattcaaggacgaatttga 35401759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 20494072 - 20493837
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||  |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| | |||| |||||||||||| ||||    
T  20494072 catcaatttggtccttgccaattttatgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaagccttgtaagaggttaacgttacac 20493973  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||| | |||||    
T  20493972 gtcacctccgttaacacaccaacttaacggagggactgatttgattgacattttgtaaattcaggaactaaatagatatttcgcaaaattcaagaacgaa 20493873  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
     ||||||||| ||| ||||||||| |||||| ||||    
T  20493872 tttggccgatattttaaaattcaatgacgaatttga 20493837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 13 - 244
Target Start/End: Complemental strand, 39345805 - 39345574
Alignment:
Q  13 aatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcg 112  Q
    |||||| || |||| |||||| ||||||||||||| ||||||||||||||| ||||||||| | ||||||| | |||| |||||||||||| |||||||     
T  39345805 aatttgatccttggcaattttctgtaaatcaatcaatttggtccctgcttgtgtggcatcttatgtggtaagccttgtaagaggttaacgttacacgtca 39345706  T
Q  113 cctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattg 212  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||| |||    
T  39345705 cctccgttaacataccaacttaacggagagactgatttgattgacattttgtaaattcagggactaaatagctatttcgcaaaattcagggacgaatttg 39345606  T
Q  213 gccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||||| |||||||||||||||| ||||    
T  39345605 gccgattttttaaaattcaaggacgaatttga 39345574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 49524577 - 49524812
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||  |||||| ||||||||||||| ||||||||||||||||||| ||| ||||||||||| | | || |||||||||||| ||||    
T  49524577 catcaatttggtccttgacaattttctgtaaatcaatcaatttggtccctgcttgcgtgacatatgacgtggtaagcctggtaagaggttaacgttacac 49524676  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| | | ||||| ||||||||||||||||||    
T  49524677 gtcacctccgttaacagaccaacttaacggaaggactgatttgattgacattttgtaaattcagggactaaatagctattttgcaaaattcagggacgaa 49524776  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
     ||| ||||||||| |||||||||||||||| ||||    
T  49524777 tttgaccgattttttaaaattcaaggacgaatttga 49524812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 64 - 244
Target Start/End: Complemental strand, 4169876 - 4169696
Alignment:
Q  64 cgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttg 163  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||||||    
T  4169876 cgtggcatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccattaacagaccaacttaacggagggactggtttgattgacattttg 4169777  T
Q  164 taaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||  | ||||||||||||||||||||||| ||||    
T  4169776 taaattcagggactaatttgatatttcgcaaaattcagagacgaaattgatcaatttttcaaaattcaaggacgaatttga 4169696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 28 - 235
Target Start/End: Original strand, 42982315 - 42982522
Alignment:
Q  28 aattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaac 127  Q
    |||||| | ||||||||||| ||||||||||||||| |||||||||||||||||||   |||| | |||| ||||| ||||||| |||||||||||| ||    
T  42982315 aattttctctaaatcaatcaatttggtccctgcttgtgtggcatctgacgtggtaaggcttgtaaaaggtcaacgttacacgtcacctccgttaacacac 42982414  T
Q  128 caacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaa 227  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| || |   |||||||||||||||||||||||| ||| | ||||||| ||||    
T  42982415 caacttaacggagggactgatttgattgacattttgtaaattcaaggacaaaataactatttcgcaaaattcagggacgaatttgacagatttttaaaaa 42982514  T
Q  228 ttcaagga 235  Q
    ||||||||    
T  42982515 ttcaagga 42982522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 10 - 239
Target Start/End: Original strand, 54387728 - 54387955
Alignment:
Q  10 atcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacg 109  Q
    |||||||||||| |||| |||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| | |||| |||||||||||  ||||     
T  54387728 atcaatttggtccttggcaattttctgtaaatcaatcagtttagtccctgcttgcgtggcatttgacgtggtaagccttgtaagaggttaacggtacac- 54387826  T
Q  110 tcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaa 209  Q
    || |||||||||||| |||||||||||||| | ||||||||||| ||||||||||||||||  ||||||| | |||||||||||||||| ||| || ||     
T  54387827 tcacctccgttaacagaccaacttaacggatgaactgatttgatggacattttgtaaattcgaggactaaatagatatttcgcaaaatt-aggaactaat 54387925  T
Q  210 ttggccgatttttcaaaattcaaggacgaa 239  Q
    ||||| ||||||| |||||| |||||||||    
T  54387926 ttggctgatttttaaaaatttaaggacgaa 54387955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 28 - 244
Target Start/End: Complemental strand, 11254344 - 11254129
Alignment:
Q  28 aattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaac 127  Q
    |||||| || ||||| |||| |||||||||||||||| |||||||||||||||||| | |||| |||| | ||||| |||| || |||||||||||||||    
T  11254344 aattttatgaaaatccatcaatttggtccctgcttgcatggcatctgacgtggtaagccttgtaagagat-aacgttacacatcacctccgttaacaaac 11254246  T
Q  128 caacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaa 227  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||   | |||||||||||||| || |||| | ||||||||||||| ||||    
T  11254245 caacttaacggagggactgatttgattgacattttgtaaattcaaggacaaaagagctatttcgcaaaatttagagacggatttggccgatttttaaaaa 11254146  T
Q  228 ttcaaggacgaaattga 244  Q
    |||||||||||| ||||    
T  11254145 ttcaaggacgaatttga 11254129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 10 - 244
Target Start/End: Complemental strand, 48645499 - 48645265
Alignment:
Q  10 atcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacg 109  Q
    ||||||||| || |||  |||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||| ||||||||||   |||||    
T  48645499 atcaatttgatccttgacaattttctgtaaatcaatcaatttggtccctgcttgcgtgacatctgacgtggtaagccttgtaagaggttaacaatacacg 48645400  T
Q  110 tcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaa 209  Q
    || ||| |||||||| ||||| | |||||||| |||||||||||  |||||||||||||||  ||||||| | |||||||||||||||||| |||||||     
T  48645399 tcaccttcgttaacagaccaattgaacggaggtactgatttgatgaacattttgtaaattcgaggactaaatagatatttcgcaaaattcatggacgaat 48645300  T
Q  210 ttggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||| | ||||||| |||||||||||||||| ||||    
T  48645299 ttgactgatttttgaaaattcaaggacgaatttga 48645265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 135 - 244
Target Start/End: Complemental strand, 43519543 - 43519434
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    |||||||||| |||||||| ||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43519543 acggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 43519444  T
Q  235 acgaaattga 244  Q
    ||||| ||||    
T  43519443 acgaatttga 43519434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 233
Target Start/End: Complemental strand, 2691566 - 2691394
Alignment:
Q  61 ttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacatt 160  Q
    ||||||||||| |||||||||||   |||| || | ||||||   ||| || ||||| ||||||  |||||||||||||  |||||||||||||||||||    
T  2691566 ttgcgtggcatttgacgtggtaagtcttgtaagcgattaacgatgcacatcacctcccttaacaggccaacttaacggattgactgatttgattgacatt 2691467  T
Q  161 ttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaag 233  Q
    ||  ||||||||||||||| | ||||||| ||||||||   ||||||| ||||| ||||||| ||||||||||    
T  2691466 ttaaaaattcagggactaaatagatattttgcaaaatttgtggacgaatttggctgatttttgaaaattcaag 2691394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 244
Target Start/End: Complemental strand, 20820176 - 20819995
Alignment:
Q  57 ctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaaccaacttaacggagggactgatttgattga 156  Q
    |||||||||||| |||||| ||||||| | |||| || ||||||      ||||| |||| |||||||  ||||||||||||| | ||||||||||||||    
T  20820176 ctgcttgcgtggtatctgatgtggtaagccttgtaagcggttaa------acgtcacctctgttaacaggccaacttaacggatgaactgatttgattga 20820083  T
Q  157 cattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||| ||||||||||||||| |  |||||| |||||||| ||| |  || ||| | ||||||| |||||||||||||||| ||||    
T  20820082 cattttgaaaattcagggactaaataaatattttgcaaaatttaggaataaatttgactgatttttgaaaattcaaggacgaagttga 20819995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 41761781 - 41761860
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | ||||||||||||||||  |||||||| ||||||||||||| |||||||||||||||| ||||    
T  41761781 aaattcagggactaaatagatatttcgcaaaatttcgggacgaatttggccgatttttgaaaattcaaggacgaatttga 41761860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 4172357 - 4172298
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtgg 68  Q
    ||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||    
T  4172357 catcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccctgcttgcgtgg 4172298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 49523213 - 49523134
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | |||||||||||||||||| ||||||| || |||||||||| ||||||||| |||||| ||||    
T  49523213 aaattcagggactaaatagatatttcgcaaaattcatggacgaatttagccgattttttaaaattcaatgacgaatttga 49523134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 6999272 - 6999385
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    ||||||||||| | |||||||| |||||  |||||||| ||||| |||||||||||   ||||| | ||||||| ||||||||||  |  ||||||||||    
T  6999272 acggagggactaaattgattgatattttacaaattcagagactattttgatatttcattaaattgaaggacgaatttggccgattcgtgcaaattcaagg 6999371  T
Q  235 acgaaattgatgat 248  Q
    ||||||||||||||    
T  6999372 acgaaattgatgat 6999385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 39922993 - 39923090
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||||    
T  39922993 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacctgtaaaaattcagggacgaaattgatg 39923090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 168
Target Start/End: Complemental strand, 41759555 - 41759492
Alignment:
Q  105 acacgtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaat 168  Q
    ||||||| |||| ||| ||| ||||||||||||||| |||||||||||||||||||||||||||    
T  41759555 acacgtcacctctgttgacagaccaacttaacggagtgactgatttgattgacattttgtaaat 41759492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 248
Target Start/End: Complemental strand, 42879388 - 42879281
Alignment:
Q  141 ggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaa 240  Q
    ||||||| |||||||||||||   ||||||| ||| ||| ||||||||||||| |||| ||||||||| ||||||||    | |||||||| |||||||     
T  42879388 ggactgacttgattgacatttaacaaattcatggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaag 42879289  T
Q  241 ttgatgat 248  Q
    ||||||||    
T  42879288 ttgatgat 42879281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 51012015 - 51011936
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||| |||||| | |||||||||||||||||| | | ||| ||| ||||||||| |||||||||||||||| ||||    
T  51012015 aaattcagagactaaatagatatttcgcaaaattcaagaaagaatttgaccgattttttaaaattcaaggacgaatttga 51011936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 5486038 - 5486135
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    |||||||||||||   |||||||||||||| ||||||||||||  ||||| ||||| ||| ||||||||    | |||||||| ||||||||||||||    
T  5486038 ttgattgacatttaacaaattcagggactattttgatatttcgttaaatttagggatgaatttggccgacccctaaaaattcagggacgaaattgatg 5486135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 39083728 - 39083647
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    |||||||||||||| ||||||||||||  ||||| ||||||||| ||||||||    | |||||||| ||||||||||||||    
T  39083728 aaattcagggactattttgatatttcgttaaatttagggacgaatttggccgacccctgaaaattcagggacgaaattgatg 39083647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 44558528 - 44558609
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    ||||||||||||||| ||||||||||||| |||| ||||| ||| ||||||||    | |||||||||||||||| ||||||    
T  44558528 aaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtgaaaattcaaggacgaagttgatg 44558609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 241
Target Start/End: Original strand, 52868183 - 52868260
Alignment:
Q  164 taaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaat 241  Q
    ||||||||| |||||| | |||||||||||||||| |  |||||| ||| ||||||||| |||||||||||| |||||    
T  52868183 taaattcagagactaaatagatatttcgcaaaatttatagacgaatttgaccgattttttaaaattcaaggaggaaat 52868260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 218
Target Start/End: Complemental strand, 230635 - 230472
Alignment:
Q  54 tccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaaccaacttaacggagggactgatttgat 153  Q
    |||||||||| |||||||||||| |||  | |  ||| ||||||||||| | ||||||  | |||||||||  | || | ||| |||||||| | |||||    
T  230635 tccctgcttgtgtggcatctgacatggagacccatgtgagaggttaacg-gccacgtcagcaccgttaacacccaaattgaacagagggactaaattgat 230537  T
Q  154 tgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgat 218  Q
     ||||| |   |||||||| |||||||||||||||||||| |||| ||||||||  |||||||||    
T  230536 cgacatatgccaaattcagagactaatttgatatttcgcataattgagggacgattttggccgat 230472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 41781628 - 41781560
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaag 233  Q
    ||||||||||||||| |  |||||| ||||||||||||||| || ||| ||||||||| ||||||||||    
T  41781628 aaattcagggactaaataaatattttgcaaaattcagggacaaatttgaccgattttttaaaattcaag 41781560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 4520437 - 4520536
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||| | ||||| ||||||||||||| |||| | ||| ||| |||||||| |  | |||||||||||||||| ||||||||    
T  4520437 ttgattgacatttaacaaattcaagaactaagttgatatttcgcataattgatggatgaatttggccgactcataaaaattcaaggacgaagttgatgat 4520536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 43520919 - 43520966
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||||||||    
T  43520919 catcaatttggtccttggaaattttgtgtaaatccatcaatttggtcc 43520966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 43778494 - 43778395
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||| ||||| ||| ||||||||||||| |||| ||||||||| ||| ||||    | |||||||||||||||| ||||||||    
T  43778494 ttgattgacatttaacaaatttagggattaaattgatatttcgcataattgagggacgaagttgaccgacccgtaaaaattcaaggacgaagttgatgat 43778395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 44992913 - 44992814
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||| ||||||| ||| ||||||||||||| |||| ||||||||| ||||||||    | |||||||| ||||||| ||||||||    
T  44992913 ttgattgacatttaacaaactcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatgat 44992814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 48813876 - 48813797
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||| ||||| |  |||||| ||||||||||||||  || ||||| ||||||| |||||||||||||||| ||||    
T  48813876 aaattcaggaactaaatatatattttgcaaaattcagggataaatttggctgatttttgaaaattcaaggacgaatttga 48813797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 246
Target Start/End: Original strand, 44794794 - 44794876
Alignment:
Q  164 taaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    |||||||||||| ||| ||||||||||||| |||| ||||||||| ||| ||||  | | |||||||| |||| |||||||||    
T  44794794 taaattcagggattaaattgatatttcgcataattgagggacgaatttgaccgacgtgtgaaaattcagggactaaattgatg 44794876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 48646782 - 48646852
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagga 235  Q
    ||||||||||||||| | |||||||||| ||||||| ||||||| || || || |||| ||||||||||||    
T  48646782 aaattcagggactaaatagatatttcgctaaattcaaggacgaatttagctgacttttgaaaattcaagga 48646852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 5484629 - 5484548
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    |||||||||||||| ||||||||||||  |||||  |||||||| ||||||||    | |||||||| ||||||||||||||    
T  5484629 aaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctaaaaattcatggacgaaattgatg 5484548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 39189471 - 39189390
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    |||||||||||||| ||||||||||||  |||||  |||||||| ||||||||    | |||||||| ||||||||||||||    
T  39189471 aaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcagggacgaaattgatg 39189390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 39921583 - 39921502
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    |||||||||||||| ||||||||||||  |||||  |||||||| ||||||||    | |||||||| ||||||||||||||    
T  39921583 aaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcagggacgaaattgatg 39921502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 35404480 - 35404548
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaag 233  Q
    ||||||||||| ||| |  ||||||||||||||| | ||||||| || |||||||||| ||||||||||    
T  35404480 aaattcagggattaaataaatatttcgcaaaattgaaggacgaatttagccgattttttaaaattcaag 35404548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 44793023 - 44792971
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 217  Q
    ||||||||||| ||| ||||||||||||| |||| ||||||||| ||||||||    
T  44793023 aaattcagggattaaattgatatttcgcataattgagggacgaatttggccga 44792971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 320710 - 320757
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  320710 catcaatttggtccttggaaattttgtgtaaatccatcaatttcgtcc 320757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 833502 - 833455
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  833502 catcaatttggtccttggaaattttgtgtaaatccatcaatttagtcc 833455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 834852 - 834899
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  834852 catcaatttggtccttggaaattttgtgtaaatccatcaatttagtcc 834899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 2828397 - 2828496
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||| ||| ||| ||||||||||||| |||| |||||| || ||||||||    | |||||||| ||||||| ||||||||    
T  2828397 ttgattgacatttaacaaattcaaggattaaattgatatttcgcataattgagggacaaagttggccgacccataaaaattcagggacgaagttgatgat 2828496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 4173550 - 4173597
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  4173550 catcaatttggtccttggaaattttgtgtaaatccatcaatttcgtcc 4173597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 5438090 - 5438043
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  5438090 catcaatttggtccttggaaattttgtgtaaatccatcaatttagtcc 5438043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 11642016 - 11642067
Alignment:
Q  105 acacgtcgcctccgttaacaaaccaacttaacggagggactgatttgattga 156  Q
    ||||||| ||||||||||||| |||||||||| || ||||||| ||||||||    
T  11642016 acacgtcacctccgttaacaagccaacttaacagatggactgaattgattga 11642067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 33264662 - 33264615
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  33264662 catcaatttggtccttggaaattttgtgtaaatccatcaatttcgtcc 33264615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 33265820 - 33265867
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  33265820 catcaatttggtccttggaaattttgtgtaaatccatcaatttcgtcc 33265867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 39085138 - 39085237
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||| ||| ||| ||||||||||||| |||| ||||||||| ||| ||||    | |||||||| ||||||| ||||||||    
T  39085138 ttgattgacatttaacaaattcatggattaaattgatatttcgcataattgagggacgaagttgaccgacccgtaaaaattcagggacgaagttgatgat 39085237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 43507446 - 43507399
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  43507446 catcaatttggtccttggaaattttgtgtaaatccatcaatttcgtcc 43507399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 43508463 - 43508510
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  43508463 catcaatttggtccttggaaattttgtgtaaatccatcaatttcgtcc 43508510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 43779902 - 43779981
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||||||||| ||||||||||||  |||||  |||||||| ||||||||    | |||||||| ||||||||||||    
T  43779902 aaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcagggacgaaattga 43779981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 319553 - 319520
Alignment:
Q  8 tcatcaatttggtcattggaaattttgtgtaaat 41  Q
    |||||||||||||| |||||||||||||||||||    
T  319553 tcatcaatttggtccttggaaattttgtgtaaat 319520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 25995084 - 25995197
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    ||||||||| | | ||||||||||||||  ||||||||| |||| ||||||||||||  |||||  ||||  || ||||||||||  |  ||||| | ||    
T  25995084 acggagggaataaattgattgacattttacaaattcaggaactattttgatatttcgttaaattgggggataaatttggccgattcgtgcaaatttatgg 25995183  T
Q  235 acgaaattgatgat 248  Q
    ||||| ||||||||    
T  25995184 acgaagttgatgat 25995197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 26397819 - 26397952
Alignment:
Q  58 tgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaaccaacttaacggagggactgatttgattgac 157  Q
    |||||| ||| |||||||| ||  || | |||| ||||||||||   |||||||  | ||||||| |  |||||||||||||| |||| |||||||||||    
T  26397819 tgcttgtgtgacatctgacatgacaagccttgtgagaggttaacagaacacgtcatcaccgttaatatcccaacttaacggagagactaatttgattgac 26397918  T
Q  158 attttgtaaattcagggactaatttgatatttcg 191  Q
    ||||   || |||||  |||||| ||||||||||    
T  26397919 atttgacaacttcagaaactaatgtgatatttcg 26397952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 42880790 - 42880871
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    |||||||||||||| ||||||||||||  |||||  |||||||| ||||||||    | |||||||| |||| |||||||||    
T  42880790 aaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcagggacaaaattgatg 42880871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 244
Target Start/End: Original strand, 2693271 - 2693366
Alignment:
Q  148 tttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||| ||||||||  |||||||  |||||| | |||||||||||||||| ||| |  || ||||| ||||||| ||||||||| |||||| ||||    
T  2693271 tttgatggacatttta-aaattcaaagactaaatagatatttcgcaaaatttaggaataaatttggctgattttttaaaattcaaagacgaagttga 2693366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 27626714 - 27626770
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggac 205  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| |||||| ||||    
T  27626714 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattcatggac 27626770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 37481034 - 37481078
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaa 179  Q
    ||||| ||||| |||||||||||||||  ||||||||||||||||    
T  37481034 acggaaggactaatttgattgacatttgttaaattcagggactaa 37481078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 44994322 - 44994374
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 217  Q
    |||||||||||||| ||||||||||||  |||||  |||||||| ||||||||    
T  44994322 aaattcagggactattttgatatttcgttaaatttggggacgaatttggccga 44994374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 51040848 - 51040772
Alignment:
Q  141 ggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 217  Q
    ||||||| |||||||||||||   ||||||||||| | | ||||||||||||| |||| | ||| ||| ||||||||    
T  51040848 ggactgacttgattgacatttaacaaattcagggattgaattgatatttcgcataattgaaggatgaatttggccga 51040772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 35403463 - 35403698
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35403463 catcaatttcgtccttcgaaattttgtgtaaaccaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacac 35403562  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35403563 gtcacctccgttaacataccaatttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 35403662  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||||||||| |||||||||||||||| ||||    
T  35403663 attggccgattttttaaaattcaaggacgaatttga 35403698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 35402214 - 35401979
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || |||||||||||||||| |||||||||||||||||||| | |||||||||||||| ||| ||||||||||||||||||||||||    
T  35402214 catcaatttcgtccttcgaaattttgtgtaaattaatcagtttggtccctgcttacatggcatctgacgtgataagctttgtcagaggttaacgtgacac 35402115  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35402114 gtcacctccgttaacagaccaatttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 35402015  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||| ||||||||||||||||||||||||||| ||||    
T  35402014 attagccgatttttcaaaattcaaggacgaatttga 35401979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 9 - 236
Target Start/End: Original strand, 20479563 - 20479790
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  20479563 catcaatttcgtccttcaaaattttgtgtaaatcaatcagtttggtccctgcttgcgtgtcatctgacgtggtaagctttgtcagaggttaacgtgacac 20479662  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||  ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20479663 gtcacctccgttaacggaccaaattaacggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaa 20479762  T
Q  209 attggccgatttttcaaaattcaaggac 236  Q
    ||||||||||||||||||||||||||||    
T  20479763 attggccgatttttcaaaattcaaggac 20479790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 27 - 236
Target Start/End: Complemental strand, 27664657 - 27664448
Alignment:
Q  27 aaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaa 126  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||| |    
T  27664657 aaattttgagtaaattaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgttacacgtcacctccgttaacata 27664558  T
Q  127 ccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaa 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  27664557 ccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatattttgcaaaattcagggacaaaattggccgatttttcaaa 27664458  T
Q  227 attcaaggac 236  Q
    ||||||||||    
T  27664457 attcaaggac 27664448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 12 - 244
Target Start/End: Original strand, 13169530 - 13169762
Alignment:
Q  12 caatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtc 111  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| ||||| ||||||||| |  ||| |||||||||||| |||||||    
T  13169530 caatttggtcattggcaattttatgtaaatcaatcaatttggtccctgcttgcgtgacatctaacgtggtaagccatgtaagaggttaacgttacacgtc 13169629  T
Q  112 gcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaatt 211  Q
     |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || ||    
T  13169630 acctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaaatagatatttcgcaaaattcagggacaaattt 13169729  T
Q  212 ggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||| |||||||||||||||| ||||    
T  13169730 ggccgatttttgaaaattcaaggacgaatttga 13169762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 77858 - 78093
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||  ||||||| |||||| |||||||  |||||||||| |||     
T  77858 catcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccctgcttgcatgaaatctgacatggtaagctttgtcgaaggttaacgttacat 77957  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||  |||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  77958 gtaacctctgttaacagaccaacttaacggagggactgatttgattggcattttgtaaattcagggacaaatttgatattttgcaaaattcagggacgaa 78057  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||||||||||||||||||| |||||| ||||    
T  78058 attggccgatttttcaaaattcaaagacgaatttga 78093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 37114186 - 37113951
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    |||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| | |||| ||||||||| || ||||    
T  37114186 catcaatttgatcattggcaattttctgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaagccttgtaagaggttaatgttacac 37114087  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||| |||    
T  37114086 gtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaatttagggactaaatagatatttcgcaaaattcagggatgaa 37113987  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
     ||| || |||||| |||||||||||||||| ||||    
T  37113986 tttgaccaattttttaaaattcaaggacgaatttga 37113951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 39857890 - 39857655
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||| |||||| ||||||||||||| ||||||||||| ||||||| ||||||||||||||| |  ||| |||||||||||| ||||    
T  39857890 catcaatttggtccttggcaattttatgtaaatcaatcaatttggtccctgtttgcgtgacatctgacgtggtaagccatgtaagaggttaacgttacac 39857791  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||    
T  39857790 gtcacctcggttaacagaccaacttaacggagggactgatttgattgacattttgtaaattctgggactaaatagatatttcgcaaaattcagggacgaa 39857691  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
     ||| ||||||||| |||||||||||||||| ||||    
T  39857690 tttgaccgattttttaaaattcaaggacgaatttga 39857655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 10 - 244
Target Start/End: Complemental strand, 47384538 - 47384304
Alignment:
Q  10 atcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacg 109  Q
    |||||||||||| |||  |||||| ||||||||||||| ||||||| ||||||||||| ||||||||||||||| | |||| |||||||||||| ||| |    
T  47384538 atcaatttggtccttgacaattttatgtaaatcaatcaatttggtcactgcttgcgtgacatctgacgtggtaagccttgtaagaggttaacgttacatg 47384439  T
Q  110 tcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaa 209  Q
    || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||     
T  47384438 tcacctccgttaacataccaacttaacggagggactgatttgattgacattttgtaaattcggggactaattagatatttcgcaaaattcaaggacgaat 47384339  T
Q  210 ttggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||  ||||||||||||||||||||||| ||||    
T  47384338 ttggctcatttttcaaaattcaaggacgaatttga 47384304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 24226826 - 24226591
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||  |||||| | ||||||||||| ||||||||||||||| |||  |||||||||||||| | |||| |||||| ||||| ||||    
T  24226826 catcaatttggtccttgacaattttctctaaatcaatcaatttggtccctgcttgtgtgatatctgacgtggtaagccttgtaagaggtcaacgttacac 24226727  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| || | | |||||||||||||||| |||||||    
T  24226726 gtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcaaggacaaaatagctatttcgcaaaattcaaggacgaa 24226627  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
     ||||||||||||| |||||||||||||||| ||||    
T  24226626 tttggccgatttttgaaaattcaaggacgaatttga 24226591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 9 - 176
Target Start/End: Complemental strand, 29995122 - 29994955
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||| || ||||    
T  29995122 catcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatatgacgtggaaagctttgtcagaggttaatgttacac 29995023  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggac 176  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29995022 gtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcagggac 29994955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 236
Target Start/End: Original strand, 6605241 - 6605468
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||  |||||| ||||||||||||| ||| ||||||||||| ||||||||||||||||||| | |||| |||||||||||| ||||    
T  6605241 catcaatttggtccttgacaattttctgtaaatcaatcaatttagtccctgcttgtgtggcatctgacgtggtaagccttgtaagaggttaacgttacac 6605340  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| | |||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||||| || ||    
T  6605341 gtcacatccgttaacagaccaacttaatggagggactgatttgattggcattttgtaaattcagggactaaatagctatttcgcaaaattcaggaacaaa 6605440  T
Q  209 attggccgatttttcaaaattcaaggac 236  Q
     ||| ||||||||| |||||||||||||    
T  6605441 tttgaccgattttttaaaattcaaggac 6605468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 44 - 244
Target Start/End: Original strand, 48227820 - 48228020
Alignment:
Q  44 atcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaaccaacttaacggaggga 143  Q
    |||| ||||||||||||||||||||||||||||||||||| | |||| |||||||||||| ||||||| |||||||||||| |||||||||| |||||||    
T  48227820 atcaatttggtccctgcttgcgtggcatctgacgtggtaagcattgtaagaggttaacgttacacgtcacctccgttaacacaccaacttaatggaggga 48227919  T
Q  144 ctgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattg 243  Q
    ||||||||||||||||||||||||||||||||| || | ||||||||||||||||||  |||||| ||| ||||||||| ||||||||| |||||| |||    
T  48227920 ctgatttgattgacattttgtaaattcagggacaaaatagatatttcgcaaaattcaaagacgaatttgaccgattttttaaaattcaaagacgaatttg 48228019  T
Q  244 a 244  Q
    |    
T  48228020 a 48228020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 34775243 - 34775008
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| |||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    ||| |||||||||||| ||||    
T  34775243 catcaatttagtccttgacaattttctgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaagtcatgtaagaggttaacgttacac 34775144  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| | | ||||| |||||||||| | | |||    
T  34775143 gtcacctccgttaacataccaacttaacggagggactgatttgattgatattttgtaaattcagggactaaatagctattttgcaaaattcatgaatgaa 34775044  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
     ||| ||||||||| ||||||||| |||||| ||||    
T  34775043 tttgaccgattttttaaaattcaaagacgaatttga 34775008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 35691672 - 35691437
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||| |||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||| |||||||||||| ||||    
T  35691672 catcaatttggtccttggcaattttctgtaaatcaatcaatttggtccctgcttgcgtgacatctgacgtggtaagccttgtaagaggttaacgttacac 35691573  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    | | |||||||||||| ||||| |||  | ||||||||||||||||||||||||||||||||| |||| || | | |||||||||||||| || ||||||    
T  35691572 gccacctccgttaacagaccaatttagtgaagggactgatttgattgacattttgtaaattcaaggacaaaatagctatttcgcaaaatttagagacgaa 35691473  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
     ||| ||||||||| |||||||||||||||| ||||    
T  35691472 tttgaccgatttttgaaaattcaaggacgaatttga 35691437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 56 - 244
Target Start/End: Complemental strand, 46437305 - 46437117
Alignment:
Q  56 cctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaaccaacttaacggagggactgatttgattg 155  Q
    ||||| |||||||||||||||||||||| |||||| |||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||| |||    
T  46437305 cctgcctgcgtggcatctgacgtggtaagctttgtaagaggttaacgttacacgtcacctccgttaacagaccaacttaacggagggactgatttggttg 46437206  T
Q  156 acattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||||||||||| |||| || | | ||||||||||||||||  |||||| ||||| ||||||| |||||||||||||||| ||||    
T  46437205 acattttgtaaattcaaggacaaaatagctatttcgcaaaattcaacgacgaatttggctgatttttgaaaattcaaggacgaatttga 46437117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 23 - 244
Target Start/End: Original strand, 45361134 - 45361355
Alignment:
Q  23 ttggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaa 122  Q
    |||| |||||| || ||||  |||| ||||||||||||||||||| ||||||||||||||| |  ||| |||||||||||| ||||||| ||||||||||    
T  45361134 ttggcaattttatgaaaatacatcaatttggtccctgcttgcgtgacatctgacgtggtaagccatgtaagaggttaacgttacacgtcacctccgttaa 45361233  T
Q  123 caaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgattttt 222  Q
    || ||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |   ||||| |||||||||||| || |||||| || ||||||    
T  45361234 cagaccaacttaacggagggactgatttgattgacattttgtaagttcaaggactaaataactattttgcaaaattcaggaacaaaattgacccattttt 45361333  T
Q  223 caaaattcaaggacgaaattga 244  Q
     |||||||||||| ||| ||||    
T  45361334 taaaattcaaggaagaatttga 45361355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 239
Target Start/End: Original strand, 22211617 - 22211836
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||| |||||| ||||||||||| | ||||||||||||||||||||||            | | |||| |||||||||||| ||||    
T  22211617 catcaatttggtccttggcaattttctgtaaatcaattaatttggtccctgcttgcgtggca------------agccttgtaagaggttaacgttacac 22211704  T
Q  109 gtcgcctccgttaacaaaccaacttaa-cggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacga 207  Q
    ||| |||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||| || | | ||||| |||||||||| ||||||    
T  22211705 gtcacctccgttaacagagcaacttaaacggagggactgatttgattgacattttgtaaattcagggacaaaatagctattttgcaaaattcatggacga 22211804  T
Q  208 aattggccgatttttcaaaattcaaggacgaa 239  Q
    | ||||||||||||| ||||||||||||||||    
T  22211805 atttggccgatttttgaaaattcaaggacgaa 22211836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 22155706 - 22155921
Alignment:
Q  13 aatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcg 112  Q
    ||||||||| |||| |||||| ||||||||||| | ||||||||||||||||||||||            | | |||| |||||||||||| |||||||     
T  22155706 aatttggtccttggcaattttctgtaaatcaattaatttggtccctgcttgcgtggca------------agccttgtaagaggttaacgttacacgtca 22155793  T
Q  113 cctccgttaacaaaccaacttaa-cggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaatt 211  Q
    |||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||| || | | ||||| |||||||||| ||||||| ||    
T  22155794 cctccgttaacagagcaacttaaacggagggactgatttgattgacattttgtaaattcagggacaaaatagctattttgcaaaattcatggacgaattt 22155893  T
Q  212 ggccgatttttcaaaattcaaggacgaa 239  Q
    ||||||||||| ||||||||||||||||    
T  22155894 ggccgatttttgaaaattcaaggacgaa 22155921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 8 - 244
Target Start/End: Complemental strand, 23904842 - 23904593
Alignment:
Q  8 tcatcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagagg----------- 96  Q
    |||||||||||||| ||| ||||||| | ||||||||||| ||||||||||||||||||| ||||||||||||||||| |||| |||||               
T  23904842 tcatcaatttggtccttg-aaattttctataaatcaatcaatttggtccctgcttgcgtgacatctgacgtggtaaaccttgtaagaggagccttgtaag 23904744  T
Q  97 ---ttaacgtgacacgtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgca 193  Q
       ||||||| ||||||| ||| | |||||  || ||||||| ||||||||||||||||||||||||||||||||||| ||||||| | | ||||| |||    
T  23904743 aggttaacgttacacgtcaccttccttaacggactaacttaatggagggactgatttgattgacattttgtaaattcatggactaaatagctattttgca 23904644  T
Q  194 aaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||| |||||| ||| ||||||||| |||||||||||||||| ||||    
T  23904643 aaattcagagacgaatttgaccgattttttaaaattcaaggacgaatttga 23904593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 10 - 239
Target Start/End: Complemental strand, 37791898 - 37791669
Alignment:
Q  10 atcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacg 109  Q
    ||||| |||||  |||| |||||| ||||||||||||| |||||||||||| ||| |||||||||||||||||| | |||| || ||||||||  |||||    
T  37791898 atcaagttggttcttggcaattttttgtaaatcaatcaatttggtccctgcctgcatggcatctgacgtggtaagccttgtaagtggttaacggtacacg 37791799  T
Q  110 tcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaa 209  Q
    || ||||||||||||  ||||||||| ||| ||| ||||||||||||||||||  ||||| ||||||||| | ||||||| ||||||||  |||| |||     
T  37791798 tcacctccgttaacatgccaacttaatggatggattgatttgattgacattttaaaaatttagggactaaatagatatttggcaaaatttggggatgaat 37791699  T
Q  210 ttggccgatttttcaaaattcaaggacgaa 239  Q
    ||||| ||||||| |||||| || ||||||    
T  37791698 ttggctgattttttaaaatttaaagacgaa 37791669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 87 - 239
Target Start/End: Complemental strand, 38549714 - 38549562
Alignment:
Q  87 ttgtcagaggttaacgtgacacgtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgata 186  Q
    |||| |||||||||||  ||||||| ||| |||||||| |||||||||||| ||||||||||||||| ||||||||||||||||  ||| ||| | ||||    
T  38549714 ttgtaagaggttaacggtacacgtcaccttcgttaacagaccaacttaacgaagggactgatttgatggacattttgtaaattcgaggattaaatagata 38549615  T
Q  187 tttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaa 239  Q
    |||| ||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  38549614 tttcacaaaattcagggacgaacttggctgatttttgaaaattcaaggacgaa 38549562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 135 - 244
Target Start/End: Original strand, 27666070 - 27666179
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    |||||||||| |||||||| ||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27666070 acggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 27666169  T
Q  235 acgaaattga 244  Q
    ||||| ||||    
T  27666170 acgaatttga 27666179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 59 - 244
Target Start/End: Original strand, 13039536 - 13039721
Alignment:
Q  59 gcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaaccaacttaacggagggactgatttgattgaca 158  Q
    ||||||||| ||||| |||||||||   |||| || ||||||||  | ||||| |||| |||||||  ||||||||||  | ||||||||||||||||||    
T  13039536 gcttgcgtgacatctaacgtggtaagtcttgtaagcggttaacggtaaacgtcacctctgttaacaggccaacttaacatatggactgatttgattgaca 13039635  T
Q  159 ttttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||| ||||||||||||||| | | |||||||||||||| ||||||||| |||   ||||||| |||||||||||||||| ||||    
T  13039636 ttttgaaaattcagggactaaatagttatttcgcaaaatttagggacgaatttgattgatttttgaaaattcaaggacgaacttga 13039721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 56419 - 56340
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  56419 aaattcagggactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 56340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 20478161 - 20478060
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  20478161 acggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcaggtacgaaattggccgatttttcaaaattcaagg 20478062  T
Q  235 ac 236  Q
    ||    
T  20478061 ac 20478060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 9 - 145
Target Start/End: Complemental strand, 38472505 - 38472369
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||  |||||| ||||||||||||| ||||||| ||| ||||||||||| |||||||| || | |||| |||||||||||| ||||    
T  38472505 catcaatttggtccttgacaattttctgtaaatcaatcaatttggtctctgtttgcgtggcatttgacgtggcaagccttgtaagaggttaacgttacac 38472406  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggact 145  Q
    ||| |||||||||||| ||||||||||| ||| ||||    
T  38472405 gtcacctccgttaacagaccaacttaacagagagact 38472369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 29996549 - 29996628
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||    
T  29996549 aaattcagggattaatttgatatttcgcaaaattcagggacaaaattgaccgatttttcaaaattcaaggacgaatttga 29996628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 24228444 - 24228523
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||| |||||| | |||||||||||||||||||||||||| |||||| |||||| |||||||||| ||||||||||    
T  24228444 aaattcagagactaaatagatatttcgcaaaattcagggacgaatttggccaattttttaaaattcaagaacgaaattga 24228523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 39859264 - 39859343
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||| ||||||| | ||||||||||||||||||||||| || ||||||||||||| |||||||||||||||| ||||    
T  39859264 aaattcaaggactaaatagatatttcgcaaaattcagggactaatttggccgattttttaaaattcaaggacgaatttga 39859343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 235
Target Start/End: Original strand, 48311687 - 48311803
Alignment:
Q  119 ttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgat 218  Q
    ||||||| ||||||||||||| ||||  ||||||||| |||||| ||||||||||||  |||| || ||||||||||||| | ||| ||| ||| | |||    
T  48311687 ttaacaacccaacttaacggacggacaaatttgattgccattttataaattcagggatgaattagacatttcgcaaaatttaaggatgaatttgactgat 48311786  T
Q  219 ttttcaaaattcaagga 235  Q
    |||| ||||||||||||    
T  48311787 tttttaaaattcaagga 48311803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 29994966 - 29994916
Alignment:
Q  194 aaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29994966 aaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 29994916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 38474178 - 38474249
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggac 236  Q
    ||||||| ||||||| | |||||||||||||||||||||||||| ||| ||||||||| ||||||| |||||    
T  38474178 aaattcaaggactaaatagatatttcgcaaaattcagggacgaatttgaccgatttttaaaaattcgaggac 38474249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 232
Target Start/End: Complemental strand, 13168203 - 13168142
Alignment:
Q  171 agggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaa 232  Q
    ||||||||| | |||||||||||||||||| ||||||| ||||||||||||| |||||||||    
T  13168203 agggactaaatagatatttcgcaaaattcaaggacgaatttggccgattttttaaaattcaa 13168142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 30940460 - 30940528
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaag 233  Q
    ||||||||||||||| | ||||||||| |||||| || |||||| ||||||||||||| ||||||||||    
T  30940460 aaattcagggactaaatagatatttcgtaaaattaagagacgaatttggccgattttttaaaattcaag 30940528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 3690255 - 3690156
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||| ||| ||| ||||||||||||| |||| ||| ||||| ||||||||  | | |||||||||||||||| ||||||||    
T  3690255 ttgattgacatttaacaaattcaaggattaaattgatatttcgcataattgaggaacgaagttggccgaactgtaaaaattcaaggacgaagttgatgat 3690156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 4321143 - 4321044
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| |||| ||||||||| ||||||||    | |||||||| ||||||| ||||||||    
T  4321143 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattaagggacgaagttggccgacccgtgaaaattcagggacgaagttgatgat 4321044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 6602424 - 6602345
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | ||||||||||||||||||||||  |  || |||||||||| ||||||||||| |||| ||||    
T  6602424 aaattcagggactaaatagatatttcgcaaaattcagggataagtttagccgattttttaaaattcaaggtcgaatttga 6602345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 30108670 - 30108571
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| |||| ||||||||| ||||||||    | |||||||| ||||||| ||||||||    
T  30108670 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatgat 30108571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 34776950 - 34777029
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | |||||||||||||||||||| | ||| |||||| |||||| |||||| ||| ||||| ||||    
T  34776950 aaattcagggactaaatagatatttcgcaaaattcaggaatgaatttggccaattttttaaaatttaagaacgaatttga 34777029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 37796216 - 37796287
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggac 236  Q
    ||||||||||||||| | ||||||||||||||||   ||||||| ||||| ||||||| |||||||||||||    
T  37796216 aaattcagggactaaatagatatttcgcaaaatttgaggacgaatttggctgatttttgaaaattcaaggac 37796287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 45465170 - 45465269
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| |||| ||||||||| ||| ||||    | |||||||||||||||| ||||||||    
T  45465170 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgagggacgaagttgaccgacccgtaaaaattcaaggacgaagttgatgat 45465269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 46810810 - 46810711
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| |||| |||||| || |||||||||   | |||||||| ||||||| ||||||||    
T  46810810 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgagggactaatttggccgatccgtgaaaattcagggacgaagttgatgat 46810711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 45463759 - 45463678
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    |||||||||||||| ||||||||||||  ||||| ||||||||| ||||||||    | |||||||| ||||||||||||||    
T  45463759 aaattcagggactattttgatatttcgttaaatttagggacgaatttggccgacccctgaaaattcagggacgaaattgatg 45463678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 47341721 - 47341802
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    ||||||||||||||| ||||||||||||| |||| ||||| ||| ||||||||    | |||||||||||||||| ||||||    
T  47341721 aaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtgaaaattcaaggacgaatttgatg 47341802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 191
Target Start/End: Original strand, 34785084 - 34785140
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcg 191  Q
    ||||||||||| | ||||||||||||||  |||||||||||||| ||||||||||||    
T  34785084 acggagggactaaattgattgacattttacaaattcagggactattttgatatttcg 34785140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 29995156 - 29995109
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||||||||    
T  29995156 catcaatttggtccttggaaattttgtgtaaatccatcaatttggtcc 29995109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 33038832 - 33038915
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    ||||||||||||||| ||||||||||||| |||| ||||| ||| ||| ||||    | |||||||||||||||| ||||||||    
T  33038832 aaattcagggactaagttgatatttcgcataattgagggatgaatttgaccgacccataaaaattcaaggacgaatttgatgat 33038915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 37115561 - 37115640
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||| ||||| | ||||||| |||||||||||| ||||| ||| | ||||||| ||||||||| |||||| ||||    
T  37115561 aaattcaggtactaaatagatattttgcaaaattcaggaacgaatttgactgattttttaaaattcaatgacgaatttga 37115640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 236
Target Start/End: Complemental strand, 45359425 - 45359354
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggac 236  Q
    ||||||| ||||||| | |||||||||||||||||| ||||| | ||| ||||||||| |||||||| ||||    
T  45359425 aaattcaaggactaaatagatatttcgcaaaattcaaggacggatttgaccgattttttaaaattcatggac 45359354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 46994765 - 46994666
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| |||| | ||||||| ||||||||    | |||||||| ||||||| ||||||||    
T  46994765 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgaaggacgaagttggccgacccgtgaaaattcagggacgaagttgatgat 46994666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 214
Target Start/End: Original strand, 35344292 - 35344374
Alignment:
Q  132 ttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggc 214  Q
    |||||||||||||   |||||| ||| | || |||||||||||| ||| ||||||||||||| |||| ||||||||| |||||    
T  35344292 ttaacggagggacctttttgatggacgtcttataaattcagggattaaattgatatttcgcataattgagggacgaatttggc 35344374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 38613516 - 38613597
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    ||||||||||||||| ||||||||||||| |||| ||||| ||| ||||||||    | |||||| ||||||||| ||||||    
T  38613516 aaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtgaaaattgaaggacgaatttgatg 38613597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 46996737 - 46996818
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    |||||||| |||||| ||||||||||||| |||| ||||||||| ||||||||    | |||||||| ||||||| ||||||    
T  46996737 aaattcagtgactaagttgatatttcgcataattgagggacgaagttggccgacgcgtgaaaattcagggacgaatttgatg 46996818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 8421505 - 8421453
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 217  Q
    ||||||||||| ||| ||||||||||||| |||| ||||||||| ||||||||    
T  8421505 aaattcagggattaaattgatatttcgcataattgagggacgaatttggccga 8421453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 33775513 - 33775445
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 217  Q
    |||||||||||||  |||||||||||| ||| ||||||||||||| |||| | ||||||| ||| ||||    
T  33775513 ttgattgacatttaataaattcagggattaaattgatatttcgcataattgaaggacgaagttgaccga 33775445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 47386263 - 47386323
Alignment:
Q  184 atatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||| ||||||| ||| | ||||||| |||||| ||||||||| ||||    
T  47386263 atatttcgcaaaattcaaggacgaatttgactgattttttaaaattaaaggacgaatttga 47386323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 7403785 - 7403828
Alignment:
Q  137 ggagggactgatttgattgacattttgtaaattcagggactaat 180  Q
    ||||||||| |||||||||||||||  |||||||||||||||||    
T  7403785 ggagggactaatttgattgacatttgataaattcagggactaat 7403828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 23906295 - 23906346
Alignment:
Q  193 aaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||| ||||||||| ||||||||||||| |||||||||||| ||| ||||    
T  23906295 aaaatttagggacgaatttggccgattttttaaaattcaaggaggaatttga 23906346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 35403429 - 35403476
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  35403429 catcaatttggtccttggaaattttgtgtaaatccatcaatttcgtcc 35403476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 36762666 - 36762765
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||||||  ||| |||||||||| || |||| |||||| || |||||||||   | |||||||| ||||||| ||||||||    
T  36762666 ttgattgacatttaacaaattcaggggttaaattgatatttcacataattgagggactaatttggccgatccgtaaaaattcagggacgaagttgatgat 36762765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 40785534 - 40785633
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||||||| ||  |||||||||| || |||| || || ||| ||||||||    | |||||||||||||||||||||||||    
T  40785534 ttgattgacatttaacaaattcagggattagattgatatttcacataattgagagatgaatttggccgacccgtgaaaattcaaggacgaaattgatgat 40785633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 46437880 - 46437825
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgc 64  Q
    ||||||||||||| || | ||||||  |||||||||||| ||||||||||||||||    
T  46437880 catcaatttggtcctttgcaattttcagtaaatcaatcaatttggtccctgcttgc 46437825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 214
Target Start/End: Original strand, 8423283 - 8423365
Alignment:
Q  132 ttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggc 214  Q
    |||||||||||||   |||||||||| | |  |||||||||||| ||| ||||||||||||| |||| |||||| || |||||    
T  8423283 ttaacggagggacctttttgattgacgtctgataaattcagggattaaattgatatttcgcataattgagggacaaatttggc 8423365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 4322607 - 4322688
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    |||||||||||||| ||||||||||||  |||||  |||||||  |||||||||   | || ||||| ||||||||||||||    
T  4322607 aaattcagggactattttgatatttcgttaaattgggggacgagtttggccgatccctgaatattcagggacgaaattgatg 4322688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 46812617 - 46812698
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    ||||| ||||||||| |||||||||| |  |||| ||||| ||| |||||||| |  | |||||||||||||||| ||||||    
T  46812617 aaatttagggactaaattgatatttcacgtaattgagggatgaatttggccgactcgtaaaaattcaaggacgaagttgatg 46812698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 2167568 - 2167516
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 217  Q
    ||||||||||||||| ||||||||||||| |||| ||||| ||| ||| ||||    
T  2167568 aaattcagggactaagttgatatttcgcataattgagggatgaatttgaccga 2167516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 33037799 - 33037699
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaat-ttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatga 247  Q
    |||||||||||||   ||||||||||| |||  |||||||||| || |||| ||||| ||| ||||||||    | |||||||||||||||| |||||||    
T  33037799 ttgattgacatttaacaaattcagggattaaaattgatatttcacataattgagggatgaatttggccgacacataaaaattcaaggacgaacttgatga 33037700  T
Q  248 t 248  Q
    |    
T  33037699 t 33037699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 35342514 - 35342462
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 217  Q
    ||||||||||| ||| ||||||||||||| |||| |||||| || ||||||||    
T  35342514 aaattcagggattaaattgatatttcgcataattgagggacaaatttggccga 35342462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 196; Significance: 1e-107; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 26223832 - 26223597
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  26223832 catcaatttggtccttggaaattttgtttaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgttacac 26223733  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26223732 gtcacctccgttaacagaccaacttaatggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 26223633  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||| |||||||||||||||||||||||||| ||||    
T  26223632 attgaccgatttttcaaaattcaaggacgaatttga 26223597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 27089123 - 27089358
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  27089123 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggttcctgcttgcgtggcatctaacgtggtaagctttgtcagaggttaacgttacac 27089222  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||    
T  27089223 gtcacctccgttaacaaaccaacttaacggaaggactgatttgattgacattttgtaaattcagggattaatttgatatttcacaaaattcaaggacgaa 27089322  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||| ||||||||||||||||||||||||||| ||||    
T  27089323 atttgccgatttttcaaaattcaaggacgaatttga 27089358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 37345806 - 37346041
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||    
T  37345806 catcaatttggtccttggaaattttgtgtaagtcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacattacac 37345905  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  37345906 gtcacctccgttaatagaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggatgaa 37346005  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||| ||||||||||||||||||||||||| ||||    
T  37346006 attggtcgatttttcaaaattcaaggacgaatttga 37346041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 9 - 236
Target Start/End: Complemental strand, 46582255 - 46582028
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||  ||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  46582255 catcaatttggttcttgaaaattttgtgtaaatctatcattttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgttacac 46582156  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46582155 gtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 46582056  T
Q  209 attggccgatttttcaaaattcaaggac 236  Q
    ||||||||||||||||||||||||||||    
T  46582055 attggccgatttttcaaaattcaaggac 46582028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 8168186 - 8167952
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8168186 catcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtcc-tacttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacac 8168088  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  8168087 gtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtacattcagggactaatttgatatttcgcaaaattcagagacgaa 8167988  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||||||||||||| ||||    
T  8167987 attggccgatttttcaaaattcaaggacgaatttga 8167952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 25276987 - 25276752
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| | ||||    
T  25276987 catcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccctacttgcgtggcatctgacgtggtaagctttgtcagaggttaacattacac 25276888  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  25276887 gtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcaaggatgaa 25276788  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||||||||||||| ||||    
T  25276787 attggccgatttttcaaaattcaaggacgaatttga 25276752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 34776814 - 34776579
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||| ||||||||||||||||||| ||||    
T  34776814 catcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtttcatctgacgtgttaagctttgtcagaggttaacgttacac 34776715  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  34776714 gtcacctccgttaacagaccaacttaacggagggactgatctgattgaaattttgtaaattcagggactaatttgatatttcgtaaaattcagggacgaa 34776615  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||||||||||||| ||||    
T  34776614 attggccgatttttcaaaattcaaggacgaatttga 34776579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 4854655 - 4854420
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  4854655 catcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatatgacgtggtaagctttgtcagaggttaacgttacac 4854556  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
     || |||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  4854555 atcacctccgttaacagaccaacttaacggagtgactgatttgattgaaattttgtaaattcagggactaatttgatctttcgcaaaattcagggacgaa 4854456  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||  ||||||||||||||||||||||||| ||||    
T  4854455 attgaacgatttttcaaaattcaaggacgaatttga 4854420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 8169412 - 8169647
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||    
T  8169412 catcaatttcgtccttcgaaattttgtgtgaatcaatcagtttggtccctgcttgcgtgacatctgacgtggtaagctttgttagaggttaacgtgacac 8169511  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  8169512 gtcacctccgttaacagaccaacttaacggagggattgatttgattgacattttgtaaattcagggactaatttgatattttgtaaaattcagggacgaa 8169611  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||||||||||||| ||||    
T  8169612 attggccgatttttcaaaattcaaggacgaatttga 8169647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 9 - 236
Target Start/End: Original strand, 1444025 - 1444252
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1444025 catcaatttcgtccttcaaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacac 1444124  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||    
T  1444125 gtcacctccgttaacagaccaaattaacggagggactaatttgattgacattttgtaaattcagggactaatttgatattttgaaaaattcagggacaaa 1444224  T
Q  209 attggccgatttttcaaaattcaaggac 236  Q
    ||||||||||||||||||||| ||||||    
T  1444225 attggccgatttttcaaaatttaaggac 1444252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 9 - 236
Target Start/End: Complemental strand, 47011701 - 47011474
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  47011701 catcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacac 47011602  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| ||||||||||||  |||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  47011601 gtcacctccgttaacaggccaaattaacggagggactgagttgattgactttttgtaaattcagggactaatttgatatttcgaaaaattcatggacgaa 47011502  T
Q  209 attggccgatttttcaaaattcaaggac 236  Q
    |||| |||||||||||||||||||||||    
T  47011501 attgtccgatttttcaaaattcaaggac 47011474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 9 - 236
Target Start/End: Complemental strand, 9120284 - 9120057
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  9120284 catcaatttcgtccttcaaaattttgtgtaaatcaatcagtttggtccctgcttgcgtgtcatctgacgtggtaagctttgtcagaggttaacgtgacac 9120185  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| || ||||||||  ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9120184 gtcacccccgttaacggaccaaattaacggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaa 9120085  T
Q  209 attggccgatttttcaaaattcaaggac 236  Q
    |||| |||||||||||||||||||||||    
T  9120084 attgaccgatttttcaaaattcaaggac 9120057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 9 - 239
Target Start/End: Complemental strand, 33599463 - 33599233
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||| ||||||||| || ||||    
T  33599463 catcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatatgacgtggtaagttttgtaagaggttaaagttacac 33599364  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||    
T  33599363 gtcacctccgttaacagaccaacttaatggagggactgatttgattgacattttgtaaattcagagattaatttgatatttcgcaaaattcatggacgaa 33599264  T
Q  209 attggccgatttttcaaaattcaaggacgaa 239  Q
     ||| ||||||||||||||||||||||||||    
T  33599263 tttgaccgatttttcaaaattcaaggacgaa 33599233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 2870920 - 2871155
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||| |||||| || |||||||||| ||||||||||||||| ||||||||||||||||||| | |||| |||||||||||| ||||    
T  2870920 catcaatttggtccttggcaattttctgcaaatcaatcaatttggtccctgcttgtgtggcatctgacgtggtaagccttgtaagaggttaacgttacac 2871019  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| | |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||  ||| || | | ||||||||||||||||||||||||    
T  2871020 gtcacttccgttaacagagcaacttaacggagggactgatttgattgacattttgtaaattcaaagacaaaatagctatttcgcaaaattcagggacgaa 2871119  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
     || |||||||||| |||||||||||||||| ||||    
T  2871120 tttagccgatttttaaaaattcaaggacgaatttga 2871155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 13 - 244
Target Start/End: Complemental strand, 31237060 - 31236829
Alignment:
Q  13 aatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcg 112  Q
    ||||||||| |||  |||||| ||||||||||||| ||||||| |||||||||||| |||||||||||||| | |||| || ||||||||| |||||||     
T  31237060 aatttggtccttgacaattttatgtaaatcaatcaatttggtctctgcttgcgtggtatctgacgtggtaagccttgtaagcggttaacgttacacgtca 31236961  T
Q  113 cctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattg 212  Q
    ||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| | ||||||||||||||||||||||| || |||    
T  31236960 cctccattaacagaccaacttaacggagggactgatttgattgatattttgtaaattcaggaactaaatagatatttcgcaaaattcagggacaaatttg 31236861  T
Q  213 gccgatttttcaaaattcaaggacgaaattga 244  Q
     ||||||||| |||||||||||||||| ||||    
T  31236860 accgattttttaaaattcaaggacgaatttga 31236829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 51894812 - 51894575
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||  |||||| ||||||||||||| ||||||||||||| ||||||||||||| |||||||   |||| |||| ||||| | ||||    
T  51894812 catcaatttggtcgttgacaattttctgtaaatcaatcaatttggtccctgctggcgtggcatctgatgtggtaagtcttgtaagagtttaacattacac 51894713  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||| ||| ||    
T  51894712 gtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaaatatatatttcgcaaaattcagagacaaa 51894613  T
Q  209 attggccgatttttcaaaattcaaggacgaaattgatg 246  Q
     ||| || |||||| |||||||||| ||||| ||||||    
T  51894612 tttgacccattttttaaaattcaagaacgaatttgatg 51894575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 3012100 - 3011865
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| || | |||||| ||||||||||||| ||||||| |||||||||||| |||||||||| ||| | |||| |||||||||||| ||||    
T  3012100 catcaatttggtccttagcaattttctgtaaatcaatcaatttggtctctgcttgcgtggtatctgacgtgataagccttgtaagaggttaacgttacac 3012001  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    |||  ||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||| |||||    
T  3012000 gtcatctccgttaatagaccaacttaacggatggactgatttgattgacattttgtaaattcagagactaaatagatatttcgcaaaattcaggaacgaa 3011901  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
     ||| | ||||||| |||||| ||||||||| ||||    
T  3011900 tttgactgattttttaaaatttaaggacgaatttga 3011865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 10 - 244
Target Start/End: Complemental strand, 52642132 - 52641898
Alignment:
Q  10 atcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacg 109  Q
    ||||||||||||||| |||||||| || |||||||||| ||||||||||||||| |||||||||||||||||||  ||||| ||| |||||||  ||| |    
T  52642132 atcaatttggtcattagaaattttctgaaaatcaatcaatttggtccctgcttgtgtggcatctgacgtggtaagttttgtaagaagttaacggtacatg 52642033  T
Q  110 tcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaa 209  Q
    || |||||||||| | ||||||||||||||||||||||||||||  ||||||||||||||   ||||||| |  |||||||||||||||||||||||||     
T  52642032 tcacctccgttaatataccaacttaacggagggactgatttgatgaacattttgtaaatttgaggactaaatatatatttcgcaaaattcagggacgaat 52641933  T
Q  210 ttggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||| ||||||| |||||||||||||||| ||||    
T  52641932 ttggctgatttttgaaaattcaaggacgaatttga 52641898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 50554408 - 50554173
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||| |||||||||||||||||||| ||||||||||  |||| || ||| ||||||||||| |  ||| |||||||||||| ||||    
T  50554408 catcaatttggtccttggcaattttgtgtaaatcaatcaatttggtcccttattgcatgacatttgacgtggtaagccatgtaagaggttaacgttacac 50554309  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| || ||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| ||||| | | |||||  |||||||||||||||||    
T  50554308 gtcacccccgttaacagaccaacttaacgaagggactgatttgattgacattttgcaaattcaggaactaaatagctattttacaaaattcagggacgaa 50554209  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
     ||| ||||||||| |||||||||||||||| ||||    
T  50554208 tttgaccgattttttaaaattcaaggacgaatttga 50554173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 181
Target Start/End: Complemental strand, 45045165 - 45044993
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||  |||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| | |||| |||||||||||| ||||    
T  45045165 catcaatttggttcttggcaattttctgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaagccttgtaagaggttaacgttacac 45045066  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatt 181  Q
    ||| |||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  45045065 gtcacctccgttaacagaccaacttaacggagagactaatttgattgacattttgtaaattcagggacgaatt 45044993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 10 - 244
Target Start/End: Original strand, 37087981 - 37088215
Alignment:
Q  10 atcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacg 109  Q
    |||||||||| | |||  |||||| | ||||||||||| |||||||||| |||| |||||||||||| ||||||   |||| |||||||||| | |||||    
T  37087981 atcaatttggcccttgacaattttctctaaatcaatcaatttggtccctacttgtgtggcatctgacttggtaagtcttgtaagaggttaactttacacg 37088080  T
Q  110 tcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaa 209  Q
    ||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| || | | |||||||||||||||||| |||||     
T  37088081 tcatcaccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaatttaaggacaaaatagctatttcgcaaaattcaggaacgaat 37088180  T
Q  210 ttggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||| |||||||||||| ||| ||||    
T  37088181 ttggccgattttttaaaattcaaggaagaatttga 37088215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 23577882 - 23577644
Alignment:
Q  13 aatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgac-----gtggtaaactttgtcagaggttaacgtgaca 107  Q
    ||||| ||| || |||| |||||| |||||||| || ||  |||||| |||||||| |||||||     ||||||| |||||||||||||||||||||||    
T  23577882 aatttcgtccttcgaaaatttgtgcaaatcaataagctttttccctggttgcgtgggatctgacttgacgtggtaagctttgtcagaggttaacgtgaca 23577783  T
Q  108 cgtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacga 207  Q
    |||| ||||||||||||  |||| |||||||| ||||||||||| ||||||||||| |||||||  ||||||||||||||||||||||||| | || |||    
T  23577782 cgtcacctccgttaacaggccaatttaacggacggactgatttggttgacattttgcaaattcattgactaatttgatatttcgcaaaattgaaggtcga 23577683  T
Q  208 aattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    ||||| |||||||||||  ||| ||||| ||| ||||||    
T  23577682 aattgcccgatttttcaggattgaaggatgaatttgatg 23577644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 38 - 184
Target Start/End: Complemental strand, 6817053 - 6816906
Alignment:
Q  38 aaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaaccaacttaacg 137  Q
    ||||| |||| |||||||| || ||||||||||||||||||||||| | |||| |||||||||||| ||| ||| |||||||||||| |||||||||| |    
T  6817053 aaatctatcaatttggtccttgtttgcgtggcatctgacgtggtaacccttgtaagaggttaacgttacatgtcacctccgttaacagaccaacttaatg 6816954  T
Q  138 gagggactgatttgattgacattttg-taaattcagggactaatttga 184  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||    
T  6816953 gagggactgatttgattgacattttgcaaaattcagggacgaatttga 6816906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 135 - 236
Target Start/End: Original strand, 47013087 - 47013188
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    ||||||||||||||||||| ||| |||   ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  47013087 acggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgtccgatttttcaaaattcaagg 47013186  T
Q  235 ac 236  Q
    ||    
T  47013187 ac 47013188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 135 - 236
Target Start/End: Original strand, 9121673 - 9121774
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  9121673 acggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaatttagggacgaaattggccgatttttcaaaattcaagg 9121772  T
Q  235 ac 236  Q
    ||    
T  9121773 ac 9121774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 33602679 - 33602758
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  33602679 aaattcagggactaatttgatatttcacaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttga 33602758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 46583591 - 46583670
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||    
T  46583591 aaattcagggactaatttgatatttcgcaaaattcagggacaaaattgaccgatttttcaaaattcaaggacgaatttga 46583670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 4856001 - 4856080
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||| ||||    
T  4856001 aaattcagggactaatttgatatttcgcaaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttga 4856080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 34778173 - 34778252
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||| ||||    
T  34778173 aaattcagggactaatttgatatttcgcaaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttga 34778252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 20944934 - 20945013
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaacttt 88  Q
    ||||||||| ||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  20944934 catcaatttcgtccttcgaaattttgtgtaaatcaatcagtttgatccctgcttgcgtggcatctgacgtggtaagcttt 20945013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 31238530 - 31238601
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggac 236  Q
    ||||||||||||||| | ||||||||||||||||||||||| || ||||||||||||| |||||||||||||    
T  31238530 aaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgattttttaaaattcaaggac 31238601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 2869668 - 2869589
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||| || |||||| | |||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||| ||||    
T  2869668 aaatttagagactaaatagatatttcgcaaaattcagggacgaatttgaccgatttttgaaaattcaaggacgaatttga 2869589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 25278403 - 25278482
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||| ||||||| | | |||||||||||||||||||||||| ||| ||||||||| |||||||||||||||| ||||    
T  25278403 aaattcaaggactaaataggtatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttga 25278482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 25278988 - 25279067
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | |||||||||||||||| ||| ||||| ||||| ||||||| |||||||||||||||| ||||    
T  25278988 aaattcagggactaaatagatatttcgcaaaatttaggaacgaatttggctgatttttgaaaattcaaggacgaatttga 25279067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 27087372 - 27087293
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | ||||||||||||||||||||||| || ||| ||||||||| |||||| ||||||||| ||||    
T  27087372 aaattcagggactaaatagatatttcgcaaaattcagggacaaatttgaccgattttttaaaatttaaggacgaatttga 27087293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 1442613 - 1442568
Alignment:
Q  191 gcaaaattcagggacgaaattggccgatttttcaaaattcaaggac 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  1442613 gcaaaattcagggacgaaattggccgatttttcaaaattcaaggac 1442568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 3013511 - 3013590
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | |||||||||||||||||| ||||||| ||| | ||| ||| |||||||||||||||| ||||    
T  3013511 aaattcagggactaaatagatatttcgcaaaattcatggacgaatttgactgatgttttaaaattcaaggacgaatttga 3013590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 6818713 - 6818792
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | ||||||| || |||| |||||||||  ||||||||||||| |||||||||||||||| ||||    
T  6818713 aaattcagggactaaatagatattttgctaaatccagggacgagtttggccgattttttaaaattcaaggacgaatttga 6818792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 244
Target Start/End: Complemental strand, 37344411 - 37344352
Alignment:
Q  185 tatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||||||||||||| ||||    
T  37344411 tatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttga 37344352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 237
Target Start/End: Original strand, 51896157 - 51896259
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    |||||||||||  |||||| ||||| |   ||||||||||||||| | ||||||||||||||||||||||| || ||| | ||||||| |||||| ||||    
T  51896157 acggagggactattttgatggacatctgtaaaattcagggactaaatagatatttcgcaaaattcagggacaaatttgactgattttttaaaatttaagg 51896256  T
Q  235 acg 237  Q
    |||    
T  51896257 acg 51896259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 6816938 - 6816875
Alignment:
Q  181 ttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||| |||| |||||||||||||||||| ||| ||||||||| |||||||||||||||| ||||    
T  6816938 ttgacattttgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttga 6816875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 11152650 - 11152551
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   |||||| |||| ||| ||||||||||||| |||| ||||||||||||||||||    | |||||||| ||||||| ||||||||    
T  11152650 ttgattgacatttaacaaattctgggattaaattgatatttcgcataattgagggacgaaattggccgacccgtgaaaattcagggacgaagttgatgat 11152551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 44159280 - 44159379
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||||| | ||| ||||||||| ||| |||| ||||||||||||| ||||| | | |||||||| ||||||| ||||||||    
T  44159280 ttgattgacatttaacaaattcaggaattaaattgatattttgcataattaagggacgaaattgaccgatctgtgaaaattcagggacgaagttgatgat 44159379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 50556132 - 50556211
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||| ||||||||| | ||||||||||||||||||| |||||| ||| | ||||||| ||||||||| |||||| ||||    
T  50556132 aaatttagggactaaatagatatttcgcaaaattcagagacgaatttgactgattttttaaaattcaaagacgaatttga 50556211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 52643650 - 52643729
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| |  ||||||||||||||||||||||||| ||  | ||||||| |||||| ||||||||| ||||    
T  52643650 aaattcagggactaaataaatatttcgcaaaattcagggacgaatttaactgatttttaaaaatttaaggacgaatttga 52643729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 51123541 - 51123590
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaatt 198  Q
    |||||||||||||| ||||||||||||| || ||||||||||||||||||    
T  51123541 ttgattgacattttataaattcagggacgaaattgatatttcgcaaaatt 51123590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 33599249 - 33599197
Alignment:
Q  192 caaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||||||| ||||    
T  33599249 caaaattcaaggacgaatttgcccgatttttcaaaattcaaggacgaatttga 33599197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 5784853 - 5784952
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| |||| ||||||||| ||| ||||    | |||||||| ||||||| ||||||||    
T  5784853 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgagggacgaagttgaccgacccgtgaaaattcagggacgaagttgatgat 5784952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 31803686 - 31803785
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| |||| | ||||||| ||||||||    | |||||||| ||||||| ||||||||    
T  31803686 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgaaggacgaagttggccgacccgtgaaaattcagggacgaagttgatgat 31803785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 37345772 - 37345819
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||||||||    
T  37345772 catcaatttggtccttggaaattttgtgtaaatccatcaatttggtcc 37345819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 45379190 - 45379091
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||| ||||| ||| ||||||||||||| |||| ||||||||| ||||||||    | |||||||| ||||||| ||||||||    
T  45379190 ttgattgacatttaacaaatttagggattaaattgatatttcgcataattaagggacgaagttggccgacccgtgaaaattcagggacgaagttgatgat 45379091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 25278934 - 25278864
Alignment:
Q  174 gactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||| | ||||||||||||||||||||||| || ||| | ||||||| |||||||||||| ||| ||||    
T  25278934 gactaaatagatatttcgcaaaattcagggacaaatttgactgatttttgaaaattcaaggatgaatttga 25278864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 27089089 - 27089135
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtc 55  Q
    ||||||||||||| |||||||||||||||||||| |||| |||||||    
T  27089089 catcaatttggtccttggaaattttgtgtaaatccatcaatttggtc 27089135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 6577091 - 6577140
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaatt 198  Q
    ||||||||||||| ||||||||||||| ||| ||||||||||||| ||||    
T  6577091 ttgattgacatttagtaaattcagggattaaattgatatttcgcataatt 6577140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 15104530 - 15104481
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggc 214  Q
    ||||||||||||||| | |||||||||||||||||||| ||||| |||||    
T  15104530 aaattcagggactaaatagatatttcgcaaaattcaggaacgaatttggc 15104481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 42134571 - 42134490
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    ||||||||||||||| ||||||||||||| |||| ||||| ||  ||||||||    | |||||||||||||||| ||||||    
T  42134571 aaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccgtaaaaattcaaggacgaatttgatg 42134490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 248
Target Start/End: Original strand, 25173020 - 25173116
Alignment:
Q  152 attgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||  ||||||| |||||| ||||||||||||  ||||| |||||  || ||||| ||||| |  |||||||| |||||| ||||||||    
T  25173020 attgacattttacaaattcaaggactattttgatatttcgttaaattaagggataaatttggctgatttatgcaaattcaaagacgaagttgatgat 25173116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 27952502 - 27952554
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 217  Q
    ||||||||||| ||| ||||||||||||| |||| ||||||||| ||||||||    
T  27952502 aaattcagggattaaattgatatttcgcataattgagggacgaatttggccga 27952554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 35478192 - 35478124
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 217  Q
    |||||||||||||  |||||||||||| ||| ||||||||| ||| |||| |||||| || ||||||||    
T  35478192 ttgattgacatttaataaattcagggattaaattgatattttgcataattgagggactaatttggccga 35478124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 8168220 - 8168173
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  8168220 catcaatttggtccttggaaattttgtgtaaatccatcaatttcgtcc 8168173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 8169378 - 8169425
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  8169378 catcaatttggtccttggaaattttgtgtaaatccatcaatttcgtcc 8169425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 25277021 - 25276974
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  25277021 catcaatttggtccttggaaattttgtgtaaatccatcaatttcgtcc 25276974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 25277055 - 25277008
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| ||||||||||| |||||||| |||| ||||||||    
T  25277055 catcaatttggtccttggaaattttatgtaaatccatcaatttggtcc 25277008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 26223866 - 26223819
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| ||| |||||||||||||||| |||| ||||||||    
T  26223866 catcaatttggtcgttgaaaattttgtgtaaatccatcaatttggtcc 26223819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 33679364 - 33679265
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||| ||| ||| ||||||||||||| |||| ||||||||| ||||| ||    | |||||||| |||| |||||||||||    
T  33679364 ttgattgacatttaacaaattcaaggattaaattgatatttcgcataattgagggacgaatttggctgacccgtaaaaattcatggacaaaattgatgat 33679265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 35009625 - 35009700
Alignment:
Q  116 ccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcg 191  Q
    |||||||||  ||||||| ||| || |||| |||||||||||||||   || ||||||||||||| ||||||||||    
T  35009625 ccgttaacatcccaacttgacgaagagactaatttgattgacatttgacaacttcagggactaatgtgatatttcg 35009700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 3369571 - 3369513
Alignment:
Q  113 cctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattca 171  Q
    ||||||||||||  |||||||||||||| |||  ||||||||||||| | |||||||||    
T  3369571 cctccgttaacaggccaacttaacggagtgacgaatttgattgacatgtggtaaattca 3369513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 18183978 - 18184059
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    ||||||||||||||| ||||||||||||| |||| ||||| ||  ||||||||    | ||||||||| |||||| ||||||    
T  18183978 aaattcagggactaagttgatatttcgcataattgagggatgattttggccgaaccgtaaaaattcaaagacgaatttgatg 18184059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 42136230 - 42136299
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgat 218  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| |||| | ||||||| ||| |||||    
T  42136230 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattaaaggacgaagttgaccgat 42136299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 18180605 - 18180537
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 217  Q
    |||||||||||||   ||||||||| | ||| ||||||||||||| |||| ||||| ||| ||||||||    
T  18180605 ttgattgacatttaacaaattcaggaattaaattgatatttcgcataattgagggatgaatttggccga 18180537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 36895545 - 36895597
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 217  Q
    ||||||||||||||| ||||||||||||| |||| | ||||||| ||| ||||    
T  36895545 aaattcagggactaagttgatatttcgcataattgatggacgaagttgaccga 36895597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 44157522 - 44157470
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 217  Q
    ||||||||||||||| ||||||||| ||| |||| ||||| ||| ||||||||    
T  44157522 aaattcagggactaagttgatattttgcataattgagggatgaatttggccga 44157470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 46638842 - 46638894
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 217  Q
    ||||||| ||||||| ||||||||||||| |||| ||||| ||| ||||||||    
T  46638842 aaattcaaggactaagttgatatttcgcataattgagggatgaagttggccga 46638894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 192; Significance: 1e-104; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 21842836 - 21843071
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  21842836 catcaatttggtcattgaaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtaacac 21842935  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||    
T  21842936 gtcacctccgttaaaaaaaaaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcatggacaaa 21843035  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||| |||||||||||||||||||||||||| ||||    
T  21843036 attgaccgatttttcaaaattcaaggacgaatttga 21843071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 9 - 236
Target Start/End: Original strand, 40782055 - 40782282
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40782055 catcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacac 40782154  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||  ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40782155 gtcacctccgttaacggaccaaattaacggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaa 40782254  T
Q  209 attggccgatttttcaaaattcaaggac 236  Q
    ||||||||||||||||||||||||||||    
T  40782255 attggccgatttttcaaaattcaaggac 40782282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 7269290 - 7269525
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  7269290 catcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccctacttgcgtggcatctgacgtggtaagctttgtcagaggttaacgttacac 7269389  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| | ||||||||||||  ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7269390 gtcacctccgttaacagatcaacttaacggactgactgatttgattaacattttataaattcagggactaatttgatatttcgcaaaattcagggacgaa 7269489  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||| |||||||||| ||||||||| |||||| ||||    
T  7269490 attagccgattttttaaaattcaaagacgaatttga 7269525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 17577779 - 17578014
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||| ||||    
T  17577779 catcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtgacatctgacgtggtaagctttgttagaggttaacgttacac 17577878  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    |||  ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||| |||    
T  17577879 gtcagctccgttaacagaccaatttaacggagggactgatttgattgacattttgtaaattcatgaactaatttgatattttgcaaaattcagggaagaa 17577978  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    || |||||||||||||||||||||||||||| ||||    
T  17577979 atgggccgatttttcaaaattcaaggacgaatttga 17578014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 9 - 236
Target Start/End: Complemental strand, 29620383 - 29620156
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  29620383 catcaatttcgtccttcaaaattttgtgtaaatcaatcagtttggtccctgcttgcgtgtcatctgacgtggtaagctttgtcagaggttaacgtgacac 29620284  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||  ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  29620283 gtcacctccgttaacggaccaaattaacggagggactaatttgattgacattttgtaaattcagagactaatttgatatttcgaaaaattcagggacgaa 29620184  T
Q  209 attggccgatttttcaaaattcaaggac 236  Q
    ||||||||||||||||||||||||||||    
T  29620183 attggccgatttttcaaaattcaaggac 29620156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 30 - 244
Target Start/End: Complemental strand, 2853110 - 2852896
Alignment:
Q  30 ttttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaacca 129  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| |||||||||||| ||||    
T  2853110 ttttgcgtaaatcaatcagtttggttcctgcttgcgtggcatctgaagtggtaagctttgtcagaggttaacgttacacgtcacctccgttaacagacca 2853011  T
Q  130 acttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaatt 229  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  2853010 acttaacggagggactgatttgattgacattttgtaaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgattttttaaaatt 2852911  T
Q  230 caaggacgaaattga 244  Q
    |||||||||| ||||    
T  2852910 caaggacgaatttga 2852896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 12738580 - 12738815
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    ||| |||||||||||| ||||    
T  12738580 catcaatttggtccttggcaattttatgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaagtcatgtaagaggttaacgttacac 12738679  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||    
T  12738680 gtcacctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaaatagatatttcgcaaaattcaggtacgaa 12738779  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
     ||||||||||||| |||||||||||||||| ||||    
T  12738780 tttggccgattttttaaaattcaaggacgaatttga 12738815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 12801403 - 12801638
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    ||| |||||||||||| ||||    
T  12801403 catcaatttggtccttggcaattttatgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaagtcatgtaagaggttaacgttacac 12801502  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||    
T  12801503 gtcacctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaaatagatatttcgcaaaattcaggtacgaa 12801602  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
     ||||||||||||| |||||||||||||||| ||||    
T  12801603 tttggccgattttttaaaattcaaggacgaatttga 12801638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 9 - 236
Target Start/End: Complemental strand, 42471793 - 42471566
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  42471793 catcaatttggtccttggaaattttgtgtaaatccatcaatttagtccctgcttgcgtggcatctgacgtggtacgctttgtcagaggttaacgtgacac 42471694  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| ||||| ||||| |||||||| ||||||||||||||||||||||||| | |||| |||||||||||| | ||||||||||||||    
T  42471693 gtcacctccgttaacagaccaatttaacagagggactaatttgattgacattttgtaaattcatgtactattttgatatttcgaataattcagggacgaa 42471594  T
Q  209 attggccgatttttcaaaattcaaggac 236  Q
    ||||||||||||||||||||||||||||    
T  42471593 attggccgatttttcaaaattcaaggac 42471566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 30464145 - 30463910
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||  |||||| ||||||||||||| ||||||||||||||||||| |||||||| |||||| | |||| |||||||||||| ||||    
T  30464145 catcaatttggtccttgacaattttctgtaaatcaatcaatttggtccctgcttgcgtgacatctgacatggtaagccttgtaagaggttaacgttacac 30464046  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| ||||||| |||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  30464045 gtcacctccgtaaacagaccaacttaacagagggactgatttgattgatattttgtaaattcagggactaaatagatatttcgcaaaattcagggacgaa 30463946  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
     ||| ||||||||| |||||||||||||||| ||||    
T  30463945 tttgaccgattttttaaaattcaaggacgaatttga 30463910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 23 - 244
Target Start/End: Original strand, 8541129 - 8541350
Alignment:
Q  23 ttggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaa 122  Q
    |||| |||||| ||||||||||||| |||||||||||||||| || ||||||||||||||| | |||| |||||||||||| |||| || ||||||||||    
T  8541129 ttggcaattttctgtaaatcaatcaatttggtccctgcttgcatgacatctgacgtggtaagccttgtaagaggttaacgttacacatcacctccgttaa 8541228  T
Q  123 caaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgattttt 222  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||| |||||||||||||    
T  8541229 cagaccaacttaacggagggactgatttgattgacattttgtaaattcaaggactaaatagatatttcgcaaaattcagggacgaatttggccgattttt 8541328  T
Q  223 caaaattcaaggacgaaattga 244  Q
     ||||||||| |||||| ||||    
T  8541329 taaaattcaatgacgaatttga 8541350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 8 - 244
Target Start/End: Original strand, 28813608 - 28813846
Alignment:
Q  8 tcatcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgaca 107  Q
    |||||||||||||| |||| |||||| ||||||||||||| ||||||| ||||||||||| ||||| ||||||||| | |||| |||||||||||| |||    
T  28813608 tcatcaatttggtccttggcaattttctgtaaatcaatcaatttggtcgctgcttgcgtgacatctaacgtggtaagccttgtaagaggttaacgttaca 28813707  T
Q  108 cgtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacga 207  Q
    |||| |||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||| ||||||    
T  28813708 cgtcacctccgttaacacaccaatttaacggagggactgatttgatttacattttgtaaattcagggactaaatagatatttcgcaaaattcaaggacga 28813807  T
Q  208 aattggccga--tttttcaaaattcaaggacgaaattga 244  Q
    | |||||| |  |||||  ||||||||||||||| ||||    
T  28813808 atttggccaatttttttttaaattcaaggacgaatttga 28813846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 23 - 244
Target Start/End: Original strand, 28821948 - 28822169
Alignment:
Q  23 ttggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaa 122  Q
    |||| |||||| ||||||||||||| |||||||||||||||| ||||||||||| |||||| | |||| |||||||||||| ||||||| | ||||||||    
T  28821948 ttggcaattttctgtaaatcaatcaatttggtccctgcttgcttggcatctgacatggtaagccttgtaagaggttaacgttacacgtcacttccgttaa 28822047  T
Q  123 caaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgattttt 222  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| |||| || | |  ||||||||||||||||||||||| ||| || ||||||    
T  28822048 cagaccaacttaacggagggactgatttgattgacattttgtaaattcaaggacaaaatagcaatttcgcaaaattcagggacgaatttgacctattttt 28822147  T
Q  223 caaaattcaaggacgaaattga 244  Q
     |||||||||||||||| ||||    
T  28822148 aaaaattcaaggacgaatttga 28822169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 37 - 244
Target Start/End: Original strand, 34328695 - 34328906
Alignment:
Q  37 taaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaact----ttgtcagaggttaacgtgacacgtcgcctccgttaacaaaccaact 132  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||    |||| |||||||||||| ||||||| || ||||||||| |||||||    
T  34328695 taaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaagctagccttgtaagaggttaacgttacacgtcaccaccgttaacagaccaact 34328794  T
Q  133 taacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaa 232  Q
    |||||||| |||||||||||||||||||||||||||||| |||| || | | ||||| |||||||||| ||||||| ||| ||||||||| |||||||||    
T  34328795 taacggagcgactgatttgattgacattttgtaaattcaaggacaaaatagctattttgcaaaattcatggacgaatttgaccgatttttgaaaattcaa 34328894  T
Q  233 ggacgaaattga 244  Q
    ||||||| ||||    
T  34328895 ggacgaatttga 34328906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 8 - 232
Target Start/End: Complemental strand, 32134482 - 32134253
Alignment:
Q  8 tcatcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgaca 107  Q
    |||||||||||||| |||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||| |||||||||||| |||    
T  32134482 tcatcaatttggtccttggcaattttctgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtgataagctttgtaagaggttaacgttaca 32134383  T
Q  108 cgtcgcctccgttaacaaaccaacttaacg-----gagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagg 202  Q
    |||| |||||||||||| |||||||||||      ||  ||||||||||||||||||||| |||||||||||||||| | |||||||  |||||||||      
T  32134382 cgtcacctccgttaacagaccaacttaacttaacagatagactgatttgattgacattttataaattcagggactaaatagatattttacaaaattcaaa 32134283  T
Q  203 gacgaaattggccgatttttcaaaattcaa 232  Q
    |||||| ||||  ||||||| |||||||||    
T  32134282 gacgaatttggttgatttttgaaaattcaa 32134253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 40780669 - 40780568
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    ||||||||||||||||||| ||| |||   ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  40780669 acggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgtccgatttttcaaaattcaagg 40780570  T
Q  235 ac 236  Q
    ||    
T  40780569 ac 40780568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 24541247 - 24541326
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  24541247 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaatgacgaatttga 24541326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 29621786 - 29621883
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaa 232  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29621786 acggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaa 29621883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 53 - 244
Target Start/End: Complemental strand, 41494045 - 41493854
Alignment:
Q  53 gtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaaccaacttaacggagggactgatttga 152  Q
    |||| |||||| ||| ||||||| ||||| | | |||| ||  |||||||  |||||||  |||||||||||  ||||||||||||| |||| |||||||    
T  41494045 gtccatgcttgtgtgacatctgatgtggtgagccttgtaagcagttaacggtacacgtcatctccgttaacaggccaacttaacggatggacggatttga 41493946  T
Q  153 ttgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||| | ||||| ||||||| | |||||||| |||||||   ||||||| ||||| ||||||| |||||||||||||||| ||||    
T  41493945 ttgacattttgaatattcatggactaaatagatatttcacaaaatttgaggacgaatttggctgatttttgaaaattcaaggacgaagttga 41493854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 24540007 - 24539933
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaa 83  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24540007 catcaatttggtccttgaaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaa 24539933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 135 - 236
Target Start/End: Original strand, 42473612 - 42473713
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    ||||| ||||||||||||| ||| | |   |||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  42473612 acggaaggactgatttgatggacgtctgtaaaattcagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaagg 42473711  T
Q  235 ac 236  Q
    ||    
T  42473712 ac 42473713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 2854362 - 2854440
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  2854362 aaattcagggactaatttgat-tttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttga 2854440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 17574407 - 17574328
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||    
T  17574407 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 17574328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 36057648 - 36057727
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||||| |||| | |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||    
T  36057648 aaattcagggtctaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaatttga 36057727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 27077367 - 27077477
Alignment:
Q  65 gtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgt 164  Q
    |||||||||||| ||| || | |||| ||||||||||   ||||||| ||||| ||||||  |||||||||||||||||| |||||||||||||||| ||    
T  27077367 gtggcatctgacatggcaagccttgtgagaggttaacagtacacgtcacctccattaacatgccaacttaacggagggaccgatttgattgacatttggt 27077466  T
Q  165 aaattcaggga 175  Q
    |||||||||||    
T  27077467 aaattcaggga 27077477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 7267932 - 7267853
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | ||||||||||||||||||| |||||| |||| |||||||| |||||||||||||||| ||||    
T  7267932 aaattcagggactaaatagatatttcgcaaaattcagtgacgaatttggacgattttttaaaattcaaggacgaatttga 7267853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 34327724 - 34327645
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | ||||||||||||||||||| |||||| |||||| |||||  |||||||||||||||| ||||    
T  34327724 aaattcagggactaaatagatatttcgcaaaattcagcgacgaatttggccaattttagaaaattcaaggacgaatttga 34327645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 1344786 - 1344899
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    ||||||||||| | ||||||||||||||  ||||||| |||||| |||||||||||| ||||||  ||||| || ||| ||||||  |  ||||||| ||    
T  1344786 acggagggactaaattgattgacattttacaaattcaaggactattttgatatttcgtaaaattgggggacaaatttgaccgattcatgcaaattcaggg 1344885  T
Q  235 acgaaattgatgat 248  Q
    ||||||||||||||    
T  1344886 acgaaattgatgat 1344899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 245
Target Start/End: Original strand, 43492133 - 43492213
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgat 245  Q
    ||||||||||||||| | |||||||||||||||||||||| ||| ||||| ||||||| |||||| ||| ||||| |||||    
T  43492133 aaattcagggactaaatagatatttcgcaaaattcagggatgaacttggctgatttttgaaaatttaagtacgaatttgat 43492213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 236
Target Start/End: Complemental strand, 2179876 - 2179805
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggac 236  Q
    ||||||||||| ||| | |||||||| ||||||||||||||||| ||| ||||||||| |||||||||||||    
T  2179876 aaattcagggattaaatagatatttcacaaaattcagggacgaatttgaccgattttttaaaattcaaggac 2179805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 8539764 - 8539685
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | |||||||||||||||||| | ||||| |||   |||||||||||||||||||||||| ||||    
T  8539764 aaattcagggactaaatagatatttcgcaaaattcaagaacgaatttgattgatttttcaaaattcaaggacgaatttga 8539685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 30468315 - 30468394
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||| ||||||| | |||||||||||||||| || |||||| ||| || |||||| |||||||||||||||||||||    
T  30468315 aaattcaaggactaaatagatatttcgcaaaattgagagacgaatttgaccaattttttaaaattcaaggacgaaattga 30468394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 38596957 - 38596876
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||| ||||||||    | |||||||||||||||| ||||||    
T  38596957 aaattcagggactaagttgatatttcgcataattgagggacgaatttggccgacccataaaaattcaaggacgaatttgatg 38596876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 32089911 - 32090010
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| |||| ||||||||| ||||||||    | |||||||| ||||||| ||||||||    
T  32089911 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatgat 32090010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 32835981 - 32835882
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||  |||||||||||| ||| ||||||||||||| |||| ||||||||| ||| ||||    | |||||||| ||||||| ||||||||    
T  32835981 ttgattgacatttaataaattcagggattaaattgatatttcgcataattaagggacgaatttgaccgacccgtgaaaattcagggacgaagttgatgat 32835882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 33257746 - 33257845
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| |||| ||||||||| ||||||||    | |||||||| ||||||| ||||||||    
T  33257746 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattaagggacgaagttggccgacccgtaaaaattcagggacgaagttgatgat 33257845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 18728637 - 18728718
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||| ||||||||    | |||||||| ||||||| ||||||    
T  18728637 aaattcagggactaagttgatatttcgcataattaagggacgaagttggccgacaagtgaaaattcagggacgaatttgatg 18728718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 17577745 - 17577792
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||||||||    
T  17577745 catcaatttggtccttggaaattttgtgtaaatccatcaatttggtcc 17577792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 18625043 - 18625122
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | |||||||| ||||||||||||||||| || || |||   | |||||||||||||||| ||||    
T  18625043 aaattcagggactaaatagatatttcacaaaattcagggacgaatttagctgatcagtgaaaattcaaggacgaatttga 18625122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 24540041 - 24539994
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||||||||    
T  24540041 catcaatttggtccttggaaattttgtgtaaatccatcaatttggtcc 24539994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 42619394 - 42619295
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   |||||| |||| ||| ||||||||||||| |||| ||||||||||||| ||||    | |||||||| ||||||| ||||||||    
T  42619394 ttgattgacatttaacaaattctgggattaaattgatatttcgcataattgagggacgaaattgaccgacccgtgaaaattcagggacgaagttgatgat 42619295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 1343340 - 1343227
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    ||||||||||| | |||||||| |||||  |||||||  ||||| |||||||||| |  ||||| ||||||||| ||  ||||||| |  ||||||||||    
T  1343340 acggagggactaaattgattgatattttacaaattcaaagactattttgatattttgttaaattaagggacgaatttaaccgatttgtacaaattcaagg 1343241  T
Q  235 acgaaattgatgat 248  Q
    ||||| ||| ||||    
T  1343240 acgaagttgttgat 1343227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 35395422 - 35395341
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    ||||||||| ||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||| ||| ||||||    
T  35395422 aaattcaggaactaaattgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggatgaatttgatg 35395341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 43318095 - 43318176
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    ||||||||||||||| ||||||||||||| |||| ||||| ||  ||||||||    | |||||||||||||||| ||||||    
T  43318095 aaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccataaaaattcaaggacgaatttgatg 43318176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 18726670 - 18726606
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattgg 213  Q
    |||||||||||||   ||||| ||||||||| ||||||||||||| |||| ||||||||| ||||    
T  18726670 ttgattgacatttaacaaattaagggactaaattgatatttcgcataattgagggacgaagttgg 18726606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 2181540 - 2181591
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgc 60  Q
    ||||||||||||| |||| |||||| ||||||| ||||| ||||||||||||    
T  2181540 catcaatttggtccttggcaattttctgtaaattaatcaatttggtccctgc 2181591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 40330517 - 40330600
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    ||||||||||| ||| ||||||||||||| |||| ||||||||  ||||||||    | |||||||| ||||||| ||||||||    
T  40330517 aaattcagggattaaattgatatttcgcataattgagggacgattttggccgacccgtgaaaattcagggacgaagttgatgat 40330600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 21842802 - 21842848
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtc 55  Q
    ||||||||||||| ||| |||||||||||||||| |||| |||||||    
T  21842802 catcaatttggtccttgaaaattttgtgtaaatccatcaatttggtc 21842848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 38176721 - 38176671
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggcc 215  Q
    ||||||||||| ||| ||||||||||||| |||| ||||||||| ||||||    
T  38176721 aaattcagggattaaattgatatttcgcataattaagggacgaatttggcc 38176671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 38203945 - 38203895
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggcc 215  Q
    ||||||||||| ||| ||||||||||||| |||| ||||||||| ||||||    
T  38203945 aaattcagggattaaattgatatttcgcataattaagggacgaatttggcc 38203895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 9 - 236
Target Start/End: Complemental strand, 24205843 - 24205616
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  24205843 catcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccctgcttgcatggcatctgacgtggtaagctttgtcagaggttaacgtgacac 24205744  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24205743 gtcacctccgttaacagaccaactgaacggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaa 24205644  T
Q  209 attggccgatttttcaaaattcaaggac 236  Q
    ||||||||||||||||||||||||||||    
T  24205643 attggccgatttttcaaaattcaaggac 24205616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 40561722 - 40561957
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  40561722 catcaatttggtccttggaaatgttgtgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgttacac 40561821  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||    
T  40561822 gtcacctccgttaacaaaccaacttaacggagggaccgatttgattgacattttgtaaattcagggactaatttgctatttcacaaaattcagagacgaa 40561921  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||||||||||||||||||| |||||| ||||    
T  40561922 attggccgatttttcaaaattcaaagacgaatttga 40561957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 14387594 - 14387359
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  14387594 catcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgttacac 14387495  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| ||| | ||||||  | || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14387494 gtcaccttctttaacagtctaatttaacggagggacttatttgattgacattttgtaaattcagggactaatttgatatttcgtaaaattcagggacgaa 14387395  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||||||||||||| ||||    
T  14387394 attggccgatttttcaaaattcaaggacgaatttga 14387359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 16764456 - 16764690
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||| ||||||||||||||||||| ||||    
T  16764456 catcaatttggtccttggaaattttgtgtaaatcaatcagtttggtctctgcttgcgtgacatctgacatggtaagctttgtcagaggttaacgttacac 16764555  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16764556 gtcacctccgttaacagac-aacttaacggagggactggtttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 16764654  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||||||| |||||||||||||||||| ||||    
T  16764655 attggccgatttctcaaaattcaaggacgaatttga 16764690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 9 - 236
Target Start/End: Original strand, 2577324 - 2577551
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  2577324 catcaatttcgtccttcgaaattttgtgtaaatcaattagtttggtccctgcttgcgtgacatctgacgtggtaagctttgtcagaggttaacgtgacac 2577423  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||| ||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  2577424 gtcacctctgttaacagaccaaattaacggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcaaaaaattcagggacgaa 2577523  T
Q  209 attggccgatttttcaaaattcaaggac 236  Q
    ||||| ||||||||||||||||||||||    
T  2577524 attggacgatttttcaaaattcaaggac 2577551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 9 - 236
Target Start/End: Original strand, 37022029 - 37022256
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  37022029 catcaatttcgtccttcaaaattttgtgtaaatcaatcagtttggtccctgcttgcgtgtcatctgacgtggtaagctttgtcagaggttaacgtgacac 37022128  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| | |||||||||  ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37022129 gtcacttccgttaacggaccaaattaacggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaa 37022228  T
Q  209 attggccgatttttcaaaattcaaggac 236  Q
    ||||| ||||||||||||||||||||||    
T  37022229 attggtcgatttttcaaaattcaaggac 37022256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 32 - 236
Target Start/End: Complemental strand, 6783586 - 6783382
Alignment:
Q  32 ttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaaccaac 131  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||    
T  6783586 ttgtgtaaatcaatcagtttggtccctgcttgcgtgacatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccgttaacagaccaac 6783487  T
Q  132 ttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattca 231  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||| ||||||||| ||||||||    
T  6783486 ttaacggagggaataatttgattgacattttgtaaattcagggactaatttgatattttgaataattcagggacgaaattgaccgattttttaaaattca 6783387  T
Q  232 aggac 236  Q
    |||||    
T  6783386 aggac 6783382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 9 - 239
Target Start/End: Complemental strand, 19906927 - 19906697
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||| |||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||| |  ||| |||||||||||| ||||    
T  19906927 catcaatttggtccttggcaattttatgtaaatcaatcaatttggtccctgtttgcgtggcatctgacgtggtaagccatgtaagaggttaacgttacac 19906828  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||| | ||||||||||||||||||||||||||    
T  19906827 gtcacctcggttaacagaccaacttaacggagggactgatttgattgacattttgtaaattatgggactaaatagatatttcgcaaaattcagggacgaa 19906728  T
Q  209 attggccgatttttcaaaattcaaggacgaa 239  Q
     ||| ||||||||| ||||||||||||||||    
T  19906727 tttgaccgattttttaaaattcaaggacgaa 19906697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 239
Target Start/End: Complemental strand, 39663397 - 39663169
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||| |||| |||  |||||||||| |||| |||||||||||||| ||||||||||||||| |  ||| |||||||||||| ||||    
T  39663397 catcaatttggtccttggcaattatgt--aaatcaatcaatttgatccctgcttgcgtgacatctgacgtggtaagccatgtaagaggttaacgttacac 39663300  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||| ||||||||||||||||||    
T  39663299 gtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaaatagctattttgcaaaattcagggacgaa 39663200  T
Q  209 attggccgatttttcaaaattcaaggacgaa 239  Q
     ||| ||||||||| ||||||||||||||||    
T  39663199 tttgaccgatttttaaaaattcaaggacgaa 39663169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 16376981 - 16376746
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||  |||||| ||||||||||||| ||||||||||||||||||| ||| ||||||||||| | |||| |||||||||||| | |     
T  16376981 catcaatttggtccttgacaattttctgtaaatcaatcaatttggtccctgcttgcgtgacatatgacgtggtaagccttgtaagaggttaacgttaaat 16376882  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||  |||| ||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| | | ||||||| ||||||||||||||||    
T  16376881 gttacctctgttaatagaccaacttaacggagggactgatttgattgatattttgtaaattcagggactaaatagctatttcgtaaaattcagggacgaa 16376782  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
     ||| ||||||||| ||||||||| |||||| ||||    
T  16376781 tttgaccgattttttaaaattcaaagacgaatttga 16376746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 6799251 - 6799487
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||| |||||| | |||||||||||  ||||||||| ||||||||||||||| |||||||| | |||| |||||||||||| ||||    
T  6799251 catcaatttggtccttggcaattttctctaaatcaatcaacttggtccctacttgcgtggcatctggcgtggtaagccttgtaagaggttaacgttacac 6799350  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattg-acattttgtaaattcagggactaatttgatatttcgcaaaattcagggacga 207  Q
    ||| || ||||||||| |||||||||||||||||||||||||||||| | ||||| |||||||| |||| || | | ||||| |||||||||| ||||||    
T  6799351 gtcaccaccgttaacagaccaacttaacggagggactgatttgattgaaaattttataaattcaaggacaaaatagctatttggcaaaattcatggacga 6799450  T
Q  208 aattggccgatttttcaaaattcaaggacgaaattga 244  Q
    | ||| ||||||||| |||||||||||||||| ||||    
T  6799451 atttgtccgatttttaaaaattcaaggacgaatttga 6799487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 39456624 - 39456859
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| |||  |||||| | ||||||||||| ||||||||||||||||||| ||| ||||||||||| | |||| ||||||||| || ||||    
T  39456624 catcaatttagtccttgacaattttctataaatcaatcaatttggtccctgcttgcgtgacatatgacgtggtaagccttgtaagaggttaatgttacac 39456723  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||| | | ||||| |||||||||| |||||||    
T  39456724 gtcacctccgttaacagaccaacttaacggatggactgatttgattgacattttataaattcagggactaaatagctattttgcaaaattcatggacgaa 39456823  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
     ||  || |||||| |||||||||||| ||| ||||    
T  39456824 tttaaccaattttttaaaattcaaggatgaatttga 39456859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 42517802 - 42517568
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    |||||||||| || |||  |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||  ||||||||||| ||||    
T  42517802 catcaatttgctccttgacaattttctgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaagccttgtatgaggttaacgttacac 42517703  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcag-ggacga 207  Q
    ||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| || | | ||||||| |||||  ||  ||       
T  42517702 gtcacctccgttaacagaccaacttaacgaagggactgatttgattgacattttgtaaattcaaggacaaaatagctatttcgtaaaat--agccgattt 42517605  T
Q  208 aattggccgatttttcaaaattcaaggacgaaattga 244  Q
     |||||||||||||| |||||||||||||||| ||||    
T  42517604 gattggccgatttttaaaaattcaaggacgaatttga 42517568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 10 - 244
Target Start/End: Complemental strand, 19581658 - 19581424
Alignment:
Q  10 atcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacg 109  Q
    |||||||||||| |||| |||||| ||||||||||||| ||||||||||||||||||| ||| ||||||||||| | |||| ||| |||||    ||| |    
T  19581658 atcaatttggtccttggcaattttctgtaaatcaatcaatttggtccctgcttgcgtgacatttgacgtggtaagccttgtaagaagttaatagtacatg 19581559  T
Q  110 tcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaa 209  Q
    || |||||||||||| || |||||||||||  |||||||||||| ||||||| ||||||||  ||||||| | ||||||||||||||||||||||| ||     
T  19581558 tcacctccgttaacatacaaacttaacggaaagactgatttgatggacatttggtaaattcgaggactaaatagatatttcgcaaaattcagggacaaat 19581459  T
Q  210 ttggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||| ||||||| |||||| ||||||||| ||||    
T  19581458 ttggctgatttttaaaaatttaaggacgaatttga 19581424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 34400553 - 34400324
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||  | |||| ||||||||||||| |||||||       ||||| |||||||||||||||   |||| |||||| ||| | |||     
T  34400553 catcaatttggtccttgacatttttctgtaaatcaatcaatttggtcg------gcgtgacatctgacgtggtaagtcttgtaagaggtcaacattacat 34400460  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
     || |||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||| |||| || | | |||||||||||||||||||| |||    
T  34400459 atcacctccgttaacagaccaacttaacggagggaccgatttgattgatattttgtaaattcaaggacaaaatagctatttcgcaaaattcagggatgaa 34400360  T
Q  209 attggccgatttttcaaaattcaaggacgaaattga 244  Q
     ||||||||||||| |||||||||||| ||| ||||    
T  34400359 tttggccgatttttgaaaattcaaggatgaatttga 34400324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 53 - 239
Target Start/End: Original strand, 37646366 - 37646552
Alignment:
Q  53 gtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaaccaacttaacggagggactgatttga 152  Q
    ||||||||||||||| ||||||||||||||| | |||| || |||||||   ||| ||| | ||||||||||  |||||||||| |||||||||||||||    
T  37646366 gtccctgcttgcgtgacatctgacgtggtaagccttgtaagcggttaacagtacatgtcacgtccgttaacaggccaacttaacagagggactgatttga 37646465  T
Q  153 ttgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaa 239  Q
    ||| ||||||| ||||||||||||||| | ||||||||||| ||||   ||||||| ||| | ||||||| ||| |||||| |||||    
T  37646466 ttggcattttgaaaattcagggactaaatagatatttcgcagaatttgaggacgaatttgactgatttttgaaagttcaagaacgaa 37646552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 9 - 176
Target Start/End: Original strand, 17697953 - 17698120
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||  ||||||  |||||  ||| | ||||||||||||||||||| ||||| |||||||||   || | |||| ||||||| ||||    
T  17697953 catcaatttggtccttgacaattttcagtaaactaattaatttggtccctgcttgcgtgacatctaacgtggtaagtcttttaagagattaacgttacac 17698052  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggac 176  Q
    ||| |||||||||| | | ||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  17698053 gtcacctccgttaatatatcaacttaacggagagactgatttgattgacattttgtaaattcaaggac 17698120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 135 - 235
Target Start/End: Original strand, 24208067 - 24208167
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  24208067 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaagg 24208166  T
Q  235 a 235  Q
    |    
T  24208167 a 24208167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 244
Target Start/End: Original strand, 31474972 - 31475159
Alignment:
Q  58 tgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaaccaacttaacggagggactgatttgattgac 157  Q
    |||||||||| ||||||||||||||| | |||| || |||||||   ||||||| ||||||||||||   ||||||||| ||||||| ||||||||||||    
T  31474972 tgcttgcgtgacatctgacgtggtaagcattgtaagcggttaacagtacacgtcacctccgttaacatgtcaacttaacagagggaccgatttgattgac 31475071  T
Q  158 a-ttttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    | ||||| ||||||||||| ||| | |||||||| |||||||  | |||||| ||| | ||||||| |||||| ||| ||||| ||||    
T  31475072 atttttgaaaattcagggattaaatagatatttctcaaaatttggtgacgaatttgactgatttttgaaaattaaagaacgaagttga 31475159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 135 - 236
Target Start/End: Original strand, 6786006 - 6786107
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||  | |||| |||||||||||||||||||||||||||||||||||    
T  6786006 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattaagggacgaaattggccgatttttcaaaattcaagg 6786105  T
Q  235 ac 236  Q
    ||    
T  6786106 ac 6786107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 135 - 244
Target Start/End: Original strand, 14389109 - 14389218
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    ||||||||||   |||||| ||||||| | ||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| ||||||||| |    
T  14389109 acggagggaccattttgatggacatttggaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaatg 14389208  T
Q  235 acgaaattga 244  Q
    ||||| ||||    
T  14389209 acgaatttga 14389218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 57 - 244
Target Start/End: Original strand, 161967 - 162153
Alignment:
Q  57 ctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacgtcgcctccgttaacaaaccaacttaacggagggactgatttgattga 156  Q
    ||||||||||| |||||||||||||||   |||| || ||||||||  ||| ||| |||||||||| | |||||||||||||| |||  |||||||||||    
T  161967 ctgcttgcgtgacatctgacgtggtaagtcttgtaagcggttaacggtacatgtcacctccgttaatagaccaacttaacggatggatcgatttgattga 162066  T
Q  157 cattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    | ||||| ||||||| | ||||| | ||||||| | ||||||  ||| |||| ||| | ||||||| ||||||||| |||||||||||    
T  162067 cgttttgaaaattcaagaactaaatagatattttgtaaaatttggggtcgaatttgactgatttttgaaaattcaa-gacgaaattga 162153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 37020627 - 37020526
Alignment:
Q  135 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 234  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||  |||||||| |||| |||||| |||||||||||||||||||||    
T  37020627 acggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcaaaaaattcaaggacaaaattgaccgatttttcaaaattcaagg 37020528  T
Q  235 ac 236  Q
    ||    
T  37020527 ac 37020526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 16763165 - 16763086
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | |||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||| ||||    
T  16763165 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgatttttaaaaattcaaggacgaatttga 16763086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 39664803 - 39664882
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | ||||||||| ||||||| |||||||| ||||||||||||| |||||||||||||||| ||||    
T  39664803 aaattcagggactaaatagatatttcgtaaaattcggggacgaatttggccgattttttaaaattcaaggacgaatttga 39664882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 40560312 - 40560233
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | |||||||||||||||||||||||||| ||||| ||||||| ||||||||| |||||| ||||    
T  40560312 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttggctgattttttaaaattcaaagacgaatttga 40560233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 244
Target Start/End: Complemental strand, 17696312 - 17696216
Alignment:
Q  148 tttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||||| |||   ||||||||||||||| | |||||||  ||||||||||||| ||| ||||||||||||| |||||||||||||||| ||||    
T  17696312 tttgattgacgtttgtaaaattcagggactaaatagatattttccaaaattcagggatgaatttggccgatttttgaaaattcaaggacgaatttga 17696216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 2767023 - 2766944
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | |||||||||||||||||| ||||||  ||| ||||||||| |||||||||||||||| ||||    
T  2767023 aaattcagggactaaatagatatttcgcaaaattcaaggacgagtttgaccgatttttaaaaattcaaggacgaatttga 2766944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 44709800 - 44709879
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | | ||||||||||||||||||| |||| ||||||| ||||| |||||||||||||||| ||||    
T  44709800 aaattcagggactaaatagttatttcgcaaaattcagggccgaatttggccggttttttaaaattcaaggacgaatttga 44709879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 19908301 - 19908381
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga-tttttcaaaattcaaggacgaaattga 244  Q
    ||||||| ||||||| | ||||||||||||||||||||||| || |||||||| ||||| |||||||||||||||| ||||    
T  19908301 aaattcaaggactaaatagatatttcgcaaaattcagggactaatttggccgatttttttaaaattcaaggacgaatttga 19908381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 41128 - 41227
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||| ||  |||||||||||| ||| ||||||||||||| |||| ||||||||| ||||||||    | |||||||| ||||||| ||||||||    
T  41128 ttgattgacaattaataaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgaaaattcagggacgaagttgatgat 41227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 11021638 - 11021539
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| |||| ||||||||| ||||||||    | |||||||| ||||||| ||||||||    
T  11021638 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtgaaaattcagggacgaagttgatgat 11021539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 28248161 - 28248260
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| |||| ||||||||| ||||||||    | |||||||| ||||||| ||||||||    
T  28248161 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatgat 28248260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 6797596 - 6797529
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaa 232  Q
    ||||| ||||||||| | |||||||||||||||||||| ||||| || ||| |||||| |||||||||    
T  6797596 aaattaagggactaaatagatatttcgcaaaattcaggaacgaatttagccaattttttaaaattcaa 6797529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 7745258 - 7745357
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    ||||||||||||||  ||||||| | || || ||||||||||||||||||  |||||||  ||||| |||  ||  |||||||| |||||||||||||||    
T  7745258 ttgattgacattttacaaattcaagaacgaaattgatatttcgcaaaatttggggacgattttggctgatgcttacaaattcaatgacgaaattgatgat 7745357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 17948913 - 17949012
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    ||||||||||||||  ||||||| |||| || ||||||||||||||||||  |||||||  ||||| |||  ||  ||||||| ||||||| ||||||||    
T  17948913 ttgattgacattttacaaattcaaggacgaaattgatatttcgcaaaatttggggacgattttggctgatgcttgcaaattcatggacgaagttgatgat 17949012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 246
Target Start/End: Complemental strand, 39646 - 39564
Alignment:
Q  164 taaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    |||||||||||| ||| ||||||||||||| |||| ||||||||| ||||||||    | |||||||| |||| |||||||||    
T  39646 taaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtaaaaattcagggactaaattgatg 39564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 361525 - 361451
Alignment:
Q  174 gactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    ||||||||||||||||| || |||| ||||| ||  ||||||||||  | |||||||||||||||| ||||||||    
T  361525 gactaatttgatatttcacataattgagggatgattttggccgattcatgaaaattcaaggacgaagttgatgat 361451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 37417362 - 37417288
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaa 239  Q
    ||||||||||||||| ||||||||||||| |||| ||||| ||| ||||||||    | ||||||||||||||||    
T  37417362 aaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccatgaaaattcaaggacgaa 37417288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 41708432 - 41708484
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 217  Q
    ||||||||||| ||| ||||||||||||| |||| ||||||||| ||||||||    
T  41708432 aaattcagggattaaattgatatttcgcataattgagggacgaatttggccga 41708484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 33298 - 33199
Alignment:
Q  149 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    |||||||||||||   ||||||||||| ||| |||||||||| || |||| | ||||||| ||||||||    | |||||||| ||||||| ||||||||    
T  33298 ttgattgacatttaacaaattcagggattaaattgatatttcacataattgaaggacgaagttggccgacccgtgaaaattcagggacgaagttgatgat 33199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 6783634 - 6783587
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  6783634 catcaatttggtccttggaaattttgtgtaaatccatcaatttcgtcc 6783587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 11315370 - 11315453
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatgat 248  Q
    ||||||||| |||| ||||||||||||  |||||  || ||||| ||||||||||  | |||||| ||||||||| ||||||||    
T  11315370 aaattcaggaactattttgatatttcgttaaattagggaacgaatttggccgattcataaaaatttaaggacgaagttgatgat 11315453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 16764422 - 16764469
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| || ||||||||||||||||| |||| ||||||||    
T  16764422 catcaatttggtccttagaaattttgtgtaaatccatcaatttggtcc 16764469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 24205877 - 24205830
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  24205877 catcaatttggtccttggaaattttgtgtaaatccatcaatttcgtcc 24205830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 38148585 - 38148503
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgg-ccgatttttcaaaattcaaggacgaaattgatg 246  Q
    |||||||||||||| ||||||||||||  |||||  ||||| || |||| ||||| | | |||||||| ||||||||||||||    
T  38148585 aaattcagggactattttgatatttcgttaaattgggggacaaatttggcccgatctctgaaaattcagggacgaaattgatg 38148503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 11023048 - 11023128
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    |||||||||||||| ||||||||||||  |||||  |||||||| ||||||||    | |||||||| ||||||||||||||    
T  11023048 aaattcagggactattttgatatttcgttaaattgggggacgaatttggccga-ccctgaaaattcagggacgaaattgatg 11023128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 25619749 - 25619668
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    ||||||||||||||| ||||||||| ||| |||| ||||| ||| ||| ||||    | |||||||||||||||| ||||||    
T  25619749 aaattcagggactaagttgatattttgcataattgagggatgaatttgaccgacccataaaaattcaaggacgaatttgatg 25619668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 28246752 - 28246671
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    ||||||||| |||| ||||||||||||  |||||  |||||||| ||||||||    | |||||||| ||||||||||||||    
T  28246752 aaattcaggaactattttgatatttcgttaaatttggggacgaatttggccgacccctaaaaattcagggacgaaattgatg 28246671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 41706629 - 41706576
Alignment:
Q  164 taaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 217  Q
    |||||||||||| ||| ||||||||||||| |||| ||||||||| ||| ||||    
T  41706629 taaattcagggattaaattgatatttcgcataattgagggacgaatttgaccga 41706576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 29909695 - 29909747
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 217  Q
    ||||| ||||||||| ||||||||||||| |||| |||||| || ||||||||    
T  29909695 aaattaagggactaaattgatatttcgcataattgagggacaaagttggccga 29909747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 42519260 - 42519340
Alignment:
Q  165 aaattcagggactaatttgatatttcgc-aaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | ||||||| || |||||||| |||| || |||  | |||||| |||||||||||||||| ||||    
T  42519260 aaattcagggactaaatagatattttgcaaaaattcaaggactaatttgatcaattttttaaaattcaaggacgaatttga 42519340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 9 - 236
Target Start/End: Original strand, 54102 - 54329
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||    
T  54102 catcaatttcgtccttcaaaattttgtgtaaatcaatcagtttggtccctgcttgcgtgtcatctgacgtggtaagctttgtcaaaggttaacgtgacac 54201  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||  ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  54202 gtcacctccgttaacggaccaaattaacggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaa 54301  T
Q  209 attggccgatttttcaaaattcaaggac 236  Q
    |||| |||||||||||||||||||||||    
T  54302 attgaccgatttttcaaaattcaaggac 54329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712 (Bit Score: 164; Significance: 9e-88; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 9 - 236
Target Start/End: Complemental strand, 1227 - 1000
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||| ||| || ||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  1227 catcaatttagtccttcgaaattttgtgtaaatccatcaatttggtccctgcttgcgtggcatttgacgtggtacgctttgtcagaggttaacgtgacac 1128  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    ||| |||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  1127 gtcacctccgttaacagaccaatttaacggagggactaatttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacgaa 1028  T
Q  209 attggccgatttttcaaaattcaaggac 236  Q
    ||| ||||||||||||||||||||||||    
T  1027 atttgccgatttttcaaaattcaaggac 1000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 1401 - 1636
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| |||| |||||| ||||||||||||| ||||||| ||||||||||| ||||||||||||||| | |||| |||||||||||| ||||    
T  1401 catcaatttggtccttggcaattttctgtaaatcaatcaatttggtctctgcttgcgtgacatctgacgtggtaagccttgtaagaggttaacgttacac 1500  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaa 208  Q
    |||   |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||  |||||||||||||||||    
T  1501 gtca--tccgttaacagaccaacttaacggagggactgatttgaatgacattttgtaaattcagggactaaattgctatttttcaaaattcagggacgaa 1598  T
Q  209 attggccgatttttcaaaattcaaggacgaaattgatg 246  Q
     ||| ||||||||| |||||||||||||||| ||||||    
T  1599 tttgaccgattttttaaaattcaaggacgaatttgatg 1636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 118; Significance: 3e-60; HSPs: 5)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 115 - 244
Target Start/End: Original strand, 14293 - 14422
Alignment:
Q  115 tccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggc 214  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  14293 tccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaatttgc 14392  T
Q  215 cgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||||||| ||||    
T  14393 cgatttttcaaaattcaaggacgaatttga 14422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 145
Target Start/End: Original strand, 7081 - 7217
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacac 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  7081 catcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgttacac 7180  T
Q  109 gtcgcctccgttaacaaaccaacttaacggagggact 145  Q
    ||| |||||||||||| ||||||||||||||||||||    
T  7181 gtcacctccgttaacagaccaacttaacggagggact 7217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 3383 - 3304
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  3383 aaattcagggactaatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaaggacgaatttga 3304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 4555 - 4476
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  4555 aaattcagggactaatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaaggacgaatttga 4476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 7047 - 7094
Alignment:
Q  9 catcaatttggtcattggaaattttgtgtaaatcaatcagtttggtcc 56  Q
    ||||||||||||| |||||||||||||||||||| |||| ||||||||    
T  7047 catcaatttggtccttggaaattttgtgtaaatccatcaatttggtcc 7094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 244
Target Start/End: Complemental strand, 106903 - 106680
Alignment:
Q  10 atcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgtgacacg 109  Q
    |||||||||||| |||  ||||||  |||||||||||| ||||||||||||||||||| ||||| ||||||||| | |||| |||||| ||||  |||||    
T  106903 atcaatttggtccttgacaattttacgtaaatcaatcaatttggtccctgcttgcgtgacatctaacgtggtaagccttgtaagaggtcaacggtacacg 106804  T
Q  110 tcgcctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaa 209  Q
    ||         |||| ||||||||||||||||||||||||||||||||||||||||||||| |  ||||| | ||||||||| |||||||| |||| ||     
T  106803 tc---------aacagaccaacttaacggagggactgatttgattgacattttgtaaattcggaaactaaatagatatttcgtaaaattcatggacaaat 106713  T
Q  210 ttggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||| ||||  |  ||||||||||||||| ||||    
T  106712 ttggctgattggt--aaattcaaggacgaatttga 106680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 8351 - 8272
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    ||||||||||||||| | ||||||| |||||||||| | ||||| |||||| |||||| |||||||||||||||| ||||    
T  8351 aaattcagggactaaatagatattttgcaaaattcaagaacgaatttggccaattttttaaaattcaaggacgaatttga 8272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 237
Target Start/End: Complemental strand, 1352 - 1280
Alignment:
Q  165 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacg 237  Q
    ||||||||||||||| | ||||||||  |||||||| ||||||| ||  || |||||| ||||||||||||||    
T  1352 aaattcagggactaaatagatatttcataaaattcatggacgaatttaaccaattttttaaaattcaaggacg 1280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 246
Target Start/End: Original strand, 6668 - 6750
Alignment:
Q  164 taaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattgatg 246  Q
    |||||||||||| ||| |||||||||| || |||| ||||||||| ||||||||    | |||||||| |||| |||||||||    
T  6668 taaattcagggattaaattgatatttcacataattgagggacgaatttggccgacccgtgaaaattcagggactaaattgatg 6750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 436336 - 436275
Alignment:
Q  183 gatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaaattga 244  Q
    |||||||||||||||| | ||| ||| ||||| ||||||| |||||||||| ||||| ||||    
T  436336 gatatttcgcaaaatttatggatgaatttggctgatttttgaaaattcaagaacgaatttga 436275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University