View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18809_low_61 (Length: 240)

Name: NF18809_low_61
Description: NF18809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18809_low_61
NF18809_low_61
[»] chr7 (60 HSPs)
chr7 (20-240)||(18662509-18662727)
chr7 (12-165)||(8293843-8293997)
chr7 (12-194)||(3734710-3734894)
chr7 (23-175)||(7397274-7397428)
chr7 (12-196)||(31493040-31493224)
chr7 (83-240)||(14195846-14196004)
chr7 (12-160)||(21501413-21501561)
chr7 (83-194)||(8313266-8313377)
chr7 (82-194)||(17153026-17153139)
chr7 (8-163)||(4785985-4786144)
chr7 (85-169)||(20582394-20582479)
chr7 (67-170)||(140254-140357)
chr7 (87-169)||(1848105-1848188)
chr7 (16-166)||(4579239-4579390)
chr7 (12-194)||(7318387-7318572)
chr7 (86-169)||(13418660-13418744)
chr7 (12-170)||(17829707-17829866)
chr7 (84-169)||(8877559-8877646)
chr7 (23-170)||(10586835-10586985)
chr7 (98-169)||(3329545-3329618)
chr7 (100-195)||(16297724-16297820)
chr7 (84-162)||(8053937-8054016)
chr7 (83-169)||(9131049-9131136)
chr7 (83-194)||(9574521-9574632)
chr7 (115-170)||(10648716-10648771)
chr7 (23-175)||(6006072-6006222)
chr7 (83-168)||(18368852-18368938)
chr7 (83-169)||(19153434-19153522)
chr7 (83-169)||(20752833-20752921)
chr7 (83-166)||(5108706-5108791)
chr7 (44-170)||(1587820-1587945)
chr7 (8-152)||(4818995-4819145)
chr7 (99-169)||(9731516-9731587)
chr7 (12-157)||(9864129-9864275)
chr7 (99-169)||(17077254-17077325)
chr7 (84-165)||(11803211-11803293)
chr7 (110-193)||(7492163-7492248)
chr7 (83-165)||(2563960-2564044)
chr7 (84-175)||(6042583-6042675)
chr7 (84-166)||(16058907-16058991)
chr7 (12-103)||(16306896-16306987)
chr7 (80-166)||(16365847-16365934)
chr7 (12-117)||(9245369-9245475)
chr7 (81-162)||(15869740-15869822)
chr7 (12-105)||(16223943-16224036)
chr7 (12-163)||(6013739-6013890)
chr7 (98-170)||(11221054-11221126)
chr7 (87-169)||(39273053-39273137)
chr7 (70-170)||(10584341-10584447)
chr7 (108-166)||(2350645-2350703)
chr7 (84-165)||(4449110-4449192)
chr7 (84-169)||(13277630-13277716)
chr7 (98-167)||(22067128-22067198)
chr7 (12-61)||(21230509-21230558)
chr7 (12-177)||(3190861-3191027)
chr7 (12-63)||(4986841-4986892)
chr7 (12-63)||(4990939-4990990)
chr7 (84-169)||(8978880-8978967)
chr7 (109-194)||(1584346-1584429)
chr7 (84-137)||(5797682-5797734)
[»] chr5 (37 HSPs)
chr5 (19-204)||(17171366-17171550)
chr5 (48-194)||(26120978-26121124)
chr5 (52-196)||(36175245-36175390)
chr5 (12-169)||(17474448-17474605)
chr5 (12-165)||(17635421-17635574)
chr5 (12-193)||(24266759-24266938)
chr5 (12-193)||(24343390-24343569)
chr5 (12-166)||(24167387-24167541)
chr5 (85-169)||(20744545-20744630)
chr5 (67-190)||(24260633-24260757)
chr5 (49-177)||(24265313-24265443)
chr5 (49-177)||(24341944-24342074)
chr5 (14-194)||(18208054-18208234)
chr5 (44-170)||(26121157-26121285)
chr5 (88-165)||(17432025-17432103)
chr5 (12-194)||(22755635-22755820)
chr5 (12-169)||(15690916-15691074)
chr5 (84-167)||(28664902-28664986)
chr5 (83-164)||(24245417-24245499)
chr5 (23-194)||(24661989-24662161)
chr5 (83-155)||(34128788-34128861)
chr5 (84-166)||(17314987-17315070)
chr5 (80-166)||(18937889-18937977)
chr5 (85-166)||(20858814-20858896)
chr5 (85-169)||(20315305-20315390)
chr5 (86-166)||(24140577-24140658)
chr5 (87-169)||(20563969-20564053)
chr5 (67-158)||(24852030-24852121)
chr5 (84-169)||(16523677-16523764)
chr5 (80-191)||(19283727-19283837)
chr5 (13-177)||(34487769-34487930)
chr5 (67-165)||(15470082-15470179)
chr5 (83-170)||(15375768-15375857)
chr5 (85-161)||(26835796-26835872)
chr5 (84-169)||(23388724-23388810)
chr5 (87-137)||(39434626-39434676)
chr5 (12-104)||(26313923-26314016)
[»] chr2 (36 HSPs)
chr2 (12-226)||(17890017-17890234)
chr2 (12-194)||(32085577-32085760)
chr2 (12-169)||(45553268-45553424)
chr2 (15-240)||(45621687-45621912)
chr2 (44-170)||(23933380-23933506)
chr2 (12-169)||(27908918-27909079)
chr2 (84-169)||(28925660-28925746)
chr2 (12-169)||(29719032-29719193)
chr2 (13-193)||(23011566-23011746)
chr2 (83-175)||(26603233-26603326)
chr2 (82-169)||(25618694-25618782)
chr2 (83-169)||(25530574-25530661)
chr2 (13-195)||(29027609-29027794)
chr2 (83-169)||(30411805-30411893)
chr2 (80-169)||(25887774-25887864)
chr2 (84-169)||(29143088-29143174)
chr2 (81-169)||(17675500-17675589)
chr2 (85-194)||(20174512-20174620)
chr2 (12-240)||(21078428-21078657)
chr2 (90-165)||(25196153-25196229)
chr2 (84-169)||(17349486-17349573)
chr2 (83-169)||(25535400-25535487)
chr2 (80-194)||(25885332-25885445)
chr2 (81-169)||(17635646-17635735)
chr2 (84-169)||(15339376-15339463)
chr2 (84-169)||(24090813-24090899)
chr2 (179-240)||(5777284-5777344)
chr2 (84-130)||(17198035-17198081)
chr2 (84-137)||(26667465-26667519)
chr2 (102-169)||(31804791-31804860)
chr2 (84-169)||(25920391-25920478)
chr2 (127-169)||(11382671-11382713)
chr2 (68-169)||(13776476-13776580)
chr2 (127-177)||(28606096-28606146)
chr2 (98-169)||(17743365-17743438)
chr2 (12-91)||(26291285-26291365)
[»] chr4 (43 HSPs)
chr4 (12-169)||(26115708-26115865)
chr4 (15-175)||(19374617-19374778)
chr4 (12-240)||(25121029-25121257)
chr4 (12-240)||(21323681-21323906)
chr4 (12-169)||(11520996-11521153)
chr4 (44-194)||(5679319-5679471)
chr4 (12-195)||(19092408-19092593)
chr4 (12-108)||(30600037-30600134)
chr4 (98-194)||(17672116-17672212)
chr4 (102-177)||(17951189-17951264)
chr4 (12-155)||(11700376-11700520)
chr4 (83-169)||(13908992-13909080)
chr4 (105-177)||(17955044-17955116)
chr4 (67-162)||(12761390-12761485)
chr4 (12-169)||(19492511-19492673)
chr4 (80-180)||(22357402-22357503)
chr4 (83-194)||(14649008-14649120)
chr4 (84-170)||(19562049-19562137)
chr4 (23-143)||(23644939-23645063)
chr4 (119-194)||(12578176-12578251)
chr4 (12-169)||(17336934-17337096)
chr4 (84-165)||(17709896-17709978)
chr4 (98-169)||(17216958-17217030)
chr4 (83-169)||(15164904-15164991)
chr4 (84-169)||(17026218-17026305)
chr4 (12-166)||(19929474-19929632)
chr4 (12-131)||(9737312-9737431)
chr4 (111-166)||(20829640-20829696)
chr4 (12-169)||(9264816-9264966)
chr4 (85-162)||(24639336-24639415)
chr4 (113-162)||(3774975-3775024)
chr4 (86-169)||(25097959-25098044)
chr4 (84-169)||(7582435-7582522)
chr4 (12-240)||(19882708-19882938)
chr4 (84-169)||(25094692-25094779)
chr4 (83-177)||(8969603-8969696)
chr4 (81-169)||(13692552-13692642)
chr4 (127-169)||(16730318-16730361)
chr4 (83-154)||(22173428-22173499)
chr4 (84-130)||(12406577-12406623)
chr4 (63-158)||(19900727-19900823)
chr4 (84-129)||(11935237-11935282)
chr4 (61-105)||(10107228-10107272)
[»] chr6 (47 HSPs)
chr6 (12-194)||(8241389-8241570)
chr6 (12-196)||(24252040-24252217)
chr6 (19-170)||(25927114-25927266)
chr6 (83-177)||(12183204-12183298)
chr6 (12-169)||(24215615-24215772)
chr6 (67-220)||(22566019-22566174)
chr6 (23-193)||(15466485-15466652)
chr6 (86-194)||(23645644-23645752)
chr6 (12-194)||(28933459-28933645)
chr6 (12-194)||(4339849-4340032)
chr6 (86-169)||(27737565-27737649)
chr6 (12-160)||(1635110-1635261)
chr6 (83-194)||(9838470-9838581)
chr6 (84-165)||(24657343-24657425)
chr6 (23-170)||(9898774-9898921)
chr6 (84-169)||(25781916-25782002)
chr6 (85-169)||(23844340-23844425)
chr6 (81-169)||(24475194-24475283)
chr6 (67-169)||(5624779-5624883)
chr6 (13-194)||(6630492-6630677)
chr6 (12-169)||(21672235-21672394)
chr6 (12-169)||(21679651-21679810)
chr6 (84-166)||(27124369-27124452)
chr6 (101-168)||(22813612-22813680)
chr6 (84-194)||(11177064-11177175)
chr6 (84-169)||(20005792-20005879)
chr6 (37-169)||(14079282-14079419)
chr6 (102-162)||(17382214-17382275)
chr6 (82-194)||(19244687-19244800)
chr6 (12-165)||(21907577-21907733)
chr6 (84-169)||(11136034-11136122)
chr6 (62-165)||(2586861-2586963)
chr6 (84-169)||(21841574-21841660)
chr6 (12-137)||(9726194-9726319)
chr6 (100-169)||(17826986-17827056)
chr6 (88-169)||(22412940-22413022)
chr6 (84-169)||(23009282-23009368)
chr6 (84-169)||(23778996-23779082)
chr6 (98-193)||(8039025-8039120)
chr6 (83-162)||(22567985-22568064)
chr6 (84-162)||(23231859-23231938)
chr6 (83-163)||(14637012-14637094)
chr6 (83-153)||(17883715-17883786)
chr6 (61-130)||(9386243-9386311)
chr6 (106-162)||(9516931-9516988)
chr6 (88-133)||(18075289-18075334)
chr6 (136-169)||(22410256-22410289)
[»] chr3 (43 HSPs)
chr3 (12-194)||(12805694-12805875)
chr3 (12-194)||(21303155-21303339)
chr3 (12-220)||(21825671-21825881)
chr3 (12-155)||(8143767-8143910)
chr3 (23-193)||(10745015-10745186)
chr3 (12-177)||(17155923-17156088)
chr3 (12-194)||(8445935-8446117)
chr3 (12-240)||(31285817-31286047)
chr3 (12-169)||(17438230-17438391)
chr3 (12-169)||(2167418-2167577)
chr3 (23-194)||(21325454-21325626)
chr3 (84-169)||(4650364-4650450)
chr3 (84-169)||(8770146-8770232)
chr3 (12-165)||(18736475-18736628)
chr3 (83-194)||(16245603-16245716)
chr3 (83-194)||(41508480-41508592)
chr3 (47-194)||(2723673-2723820)
chr3 (84-169)||(8765244-8765330)
chr3 (84-165)||(8170013-8170096)
chr3 (84-166)||(12754797-12754881)
chr3 (87-169)||(16229831-16229915)
chr3 (88-166)||(932884-932963)
chr3 (23-163)||(8267076-8267219)
chr3 (82-157)||(8319196-8319271)
chr3 (84-168)||(20023427-20023512)
chr3 (92-162)||(19925504-19925576)
chr3 (83-165)||(21302061-21302145)
chr3 (12-106)||(821316-821411)
chr3 (111-169)||(3116321-3116380)
chr3 (12-157)||(6290051-6290196)
chr3 (84-169)||(8882997-8883084)
chr3 (85-170)||(19908444-19908531)
chr3 (91-166)||(27413778-27413855)
chr3 (12-107)||(13908055-13908151)
chr3 (99-169)||(20429849-20429920)
chr3 (98-169)||(19576109-19576182)
chr3 (12-84)||(22245527-22245600)
chr3 (12-130)||(7494915-7495035)
chr3 (84-169)||(19909847-19909934)
chr3 (83-165)||(5508477-5508561)
chr3 (81-169)||(12411289-12411375)
chr3 (85-169)||(19167535-19167620)
chr3 (12-130)||(7478154-7478275)
[»] scaffold0024 (1 HSPs)
scaffold0024 (13-194)||(39699-39882)
[»] chr1 (53 HSPs)
chr1 (12-193)||(12012615-12012797)
chr1 (12-204)||(17121303-17121495)
chr1 (84-240)||(32382883-32383040)
chr1 (27-176)||(28008237-28008388)
chr1 (51-176)||(16360003-16360129)
chr1 (84-194)||(18100888-18100998)
chr1 (12-170)||(15807821-15807981)
chr1 (86-170)||(22664345-22664429)
chr1 (80-163)||(12208746-12208830)
chr1 (81-163)||(21334589-21334672)
chr1 (85-166)||(21449218-21449301)
chr1 (67-166)||(23037868-23037969)
chr1 (84-169)||(9401644-9401730)
chr1 (12-169)||(17359299-17359461)
chr1 (73-194)||(22620376-22620498)
chr1 (12-194)||(24281391-24281572)
chr1 (83-169)||(15543840-15543928)
chr1 (83-167)||(21973078-21973164)
chr1 (98-169)||(29242645-29242717)
chr1 (84-169)||(16916820-16916907)
chr1 (93-176)||(33190809-33190892)
chr1 (84-169)||(727594-727680)
chr1 (84-177)||(9787753-9787847)
chr1 (88-165)||(16069440-16069518)
chr1 (81-165)||(17610127-17610213)
chr1 (84-169)||(22623029-22623115)
chr1 (84-165)||(21666483-21666565)
chr1 (13-155)||(24267586-24267729)
chr1 (23-139)||(25960978-25961094)
chr1 (80-169)||(13345208-13345296)
chr1 (98-169)||(16179144-16179217)
chr1 (116-169)||(51473783-51473836)
chr1 (113-169)||(16787631-16787687)
chr1 (84-169)||(18736126-18736213)
chr1 (84-169)||(18825782-18825868)
chr1 (84-169)||(23179923-23180009)
chr1 (83-141)||(24214705-24214763)
chr1 (67-169)||(44795507-44795611)
chr1 (98-166)||(18529080-18529149)
chr1 (98-169)||(25405519-25405591)
chr1 (37-138)||(15813368-15813471)
chr1 (84-169)||(14781740-14781827)
chr1 (146-240)||(21847701-21847795)
chr1 (88-169)||(21987872-21987955)
chr1 (67-169)||(15813012-15813116)
chr1 (103-169)||(34481108-34481174)
chr1 (88-169)||(31235927-31236010)
chr1 (108-169)||(14779704-14779766)
chr1 (108-169)||(18830608-18830670)
chr1 (12-76)||(16787547-16787612)
chr1 (12-103)||(17837718-17837810)
chr1 (87-166)||(24054108-24054188)
chr1 (12-40)||(34481211-34481239)
[»] chr8 (26 HSPs)
chr8 (12-168)||(9642018-9642174)
chr8 (12-170)||(30121956-30122115)
chr8 (23-177)||(34497247-34497402)
chr8 (23-194)||(25182238-25182413)
chr8 (50-170)||(7983719-7983839)
chr8 (102-194)||(14528263-14528355)
chr8 (84-221)||(44010898-44011037)
chr8 (83-177)||(13697986-13698079)
chr8 (80-169)||(24114154-24114244)
chr8 (81-169)||(24269735-24269824)
chr8 (12-218)||(24644926-24645137)
chr8 (83-154)||(26394572-26394644)
chr8 (83-169)||(29382234-29382322)
chr8 (12-162)||(24110469-24110623)
chr8 (84-169)||(16404039-16404125)
chr8 (101-169)||(18569193-18569262)
chr8 (12-158)||(5052729-5052875)
chr8 (80-169)||(18448412-18448502)
chr8 (14-169)||(13314795-13314953)
chr8 (85-169)||(23893089-23893174)
chr8 (23-178)||(19786861-19787020)
chr8 (12-158)||(15238948-15239093)
chr8 (84-166)||(17101779-17101863)
chr8 (111-169)||(6885096-6885155)
chr8 (12-78)||(17976845-17976912)
chr8 (106-169)||(17509383-17509447)
[»] scaffold0043 (1 HSPs)
scaffold0043 (12-165)||(89656-89809)
[»] scaffold0622 (1 HSPs)
scaffold0622 (12-194)||(843-1025)
[»] scaffold0671 (1 HSPs)
scaffold0671 (84-169)||(569-655)
[»] scaffold0427 (1 HSPs)
scaffold0427 (44-193)||(2651-2801)
[»] scaffold0102 (1 HSPs)
scaffold0102 (67-169)||(35677-35779)
[»] scaffold0155 (1 HSPs)
scaffold0155 (83-169)||(35867-35954)
[»] scaffold0263 (1 HSPs)
scaffold0263 (84-169)||(15785-15871)
[»] scaffold0056 (2 HSPs)
scaffold0056 (84-169)||(25113-25199)
scaffold0056 (85-169)||(21403-21488)
[»] scaffold0062 (1 HSPs)
scaffold0062 (83-194)||(43100-43212)
[»] scaffold0005 (1 HSPs)
scaffold0005 (83-194)||(168172-168284)
[»] scaffold0008 (1 HSPs)
scaffold0008 (12-177)||(54992-55160)
[»] scaffold0638 (1 HSPs)
scaffold0638 (84-170)||(696-784)
[»] scaffold0002 (1 HSPs)
scaffold0002 (87-177)||(114619-114710)
[»] scaffold1869 (1 HSPs)
scaffold1869 (84-169)||(263-349)
[»] scaffold0672 (1 HSPs)
scaffold0672 (12-103)||(1936-2028)
[»] scaffold0351 (2 HSPs)
scaffold0351 (87-177)||(151-242)
scaffold0351 (87-176)||(5641-5731)
[»] scaffold0653 (1 HSPs)
scaffold0653 (12-117)||(4288-4394)
[»] scaffold0111 (1 HSPs)
scaffold0111 (83-169)||(3772-3860)
[»] scaffold0838 (1 HSPs)
scaffold0838 (83-161)||(2515-2593)
[»] scaffold0832 (1 HSPs)
scaffold0832 (83-161)||(2546-2624)
[»] scaffold0238 (1 HSPs)
scaffold0238 (12-118)||(19300-19407)
[»] scaffold0054 (1 HSPs)
scaffold0054 (84-169)||(72148-72235)
[»] scaffold0035 (1 HSPs)
scaffold0035 (92-169)||(70050-70129)
[»] scaffold0034 (1 HSPs)
scaffold0034 (84-169)||(76542-76629)
[»] scaffold0016 (1 HSPs)
scaffold0016 (84-169)||(3658-3744)
[»] scaffold0006 (2 HSPs)
scaffold0006 (12-76)||(18542-18607)
scaffold0006 (12-117)||(222835-222941)
[»] scaffold0957 (1 HSPs)
scaffold0957 (82-169)||(3283-3371)
[»] scaffold0001 (1 HSPs)
scaffold0001 (88-170)||(69217-69301)
[»] scaffold0386 (2 HSPs)
scaffold0386 (84-169)||(5979-6066)
scaffold0386 (84-169)||(6589-6676)


Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 20 - 240
Target Start/End: Complemental strand, 18662727 - 18662509
Alignment:
Q  20 tagatagtctacttagaataaatgaacgcgacatgaatgttattaattccaacaaatgattaggggggattcgaagagtcctaaccgctgcttacatttc 119  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18662727 tagatagtctacttagaataaatgaacgcgacatggatgttattaattccaacaaatgattaggggg-attcgaagagtcctaaccgctgcttacatttc 18662629  T
Q  120 tgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttatttatattttgttcaccaaataagtaac 219  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18662628 tgcaaccaaaacaggtaacttgctctgttgcaaacaaataaaaattgcaatatctaactctcaaatcttttatttatattttgttcaccaaataagtaac 18662529  T
Q  220 gtaaatttgtttggacgaaac 240  Q
    || || |||||||||||||||    
T  18662528 gtgaa-ttgtttggacgaaac 18662509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 12 - 165
Target Start/End: Original strand, 8293843 - 8293997
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    ||||||||||||||||||||||||||||| |||||||||| ||| ||||||| ||||||||||||||| | ||||  |||| |||| |||||||| ||||    
T  8293843 tcatcacttagatagtctacttagaataactgaacgcgacttgattgttatttaattccaacaaatgagttggggatattcaaagaatcctaaccactgc 8293942  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaatt 165  Q
      ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  8293943 gaacatttctgcaaccaaaacaggtaacttgctctgttgcaaacagataaaaatt 8293997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 194
Target Start/End: Complemental strand, 3734894 - 3734710
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaac-aaatgattaggggggattcgaagagtcctaaccgctg 109  Q
    |||||||||  |||||||||||| ||||| | |||  ||||||||||||||| ||||||||| |||| | |||||| ||||| |||||||||||||  ||    
T  3734894 tcatcacttgtatagtctacttaaaataactaaacatgacatgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattg 3734795  T
Q  110 cttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttattt 194  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||| | |||| || || ||||||||||    
T  3734794 cttacttttctgcaaccaaaacaggtaacttgctctgttgcaaacagataaaatttgcaatctttaacccttaactcttttattt 3734710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 7397428 - 7397274
Alignment:
Q  23 atagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgcttacatttctg 121  Q
    ||||||||||||  |||| | | ||| |||||||||||||| ||||||||||||||| ||| ||| ||||||||| ||||||||||||||||| ||||||    
T  7397428 atagtctacttaagataactaatcgccacatgaatgttatttaattccaacaaatgaatagagggaattcgaagaatcctaaccgctgcttacttttctg 7397329  T
Q  122 caacc-aaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatcta 175  Q
    ||||| ||||||| ||||||| | |||||||||||||||||||||||||| ||||    
T  7397328 caaccaaaaacagataacttgttttgttgcaaacagataaaaattgcaatctcta 7397274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 196
Target Start/End: Complemental strand, 31493224 - 31493040
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatg--aacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgct 108  Q
    |||| ||||| || ||||||||||||||| |   ||| |||||| ||||||||| ||||||||||||||| || | ||| |||||||| ||||||||| |    
T  31493224 tcattacttatattgtctacttagaataactctaaacacgacataaatgttatttaattccaacaaatgaataagaggg-ttcgaagaatcctaaccgtt 31493126  T
Q  109 gcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttatttat 196  Q
    |||||||||||| ||||||||||| ||||||  || ||||||||||||||||||||||||   |||||| ||||| ||||||||||||    
T  31493125 gcttacatttctacaaccaaaacaagtaactgactctgttgcaaacagataaaaattgca--ctctaaccctcaactcttttatttat 31493040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 83 - 240
Target Start/End: Original strand, 14195846 - 14196004
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatc-taactctc 181  Q
    |||||||||||||| || |||  | ||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||| || || |  ||    
T  14195846 gggggattcgaagaatcttaattgttgcttacatttctgcaatcaaaacagataacttgctctgttgcaaacagataaaaattgcaatctcttatccatc 14195945  T
Q  182 aaatcttttatttatattttgtt-caccaaataagtaacgtaaatttgtttggacgaaac 240  Q
    || ||||||||||||||||||||  || ||||||||||||  || |||||||||||||||    
T  14195946 aactcttttatttatattttgttaaacgaaataagtaacgcgaa-ttgtttggacgaaac 14196004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 21501561 - 21501413
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    |||||||||||||||||||| ||  |||| |||||||||| | | ||||||| ||||||||||||||| || ||||||||| || | | ||||| |||||    
T  21501561 tcatcacttagatagtctacataagataactgaacgcgacttaactgttatttaattccaacaaatgaatatgggggattcaaataattctaactgctgc 21501462  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataa 160  Q
    | ||||| ||||||||||||||||||||||| | ||||||||||||||||    
T  21501461 taacatt-ctgcaaccaaaacaggtaacttgttttgttgcaaacagataa 21501413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 8313266 - 8313377
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctca 182  Q
    ||||||||| |||||||||||  | ||||||| ||||||||||||||| |||||||||||| ||||| |||||||||||||||||||| |||||| || |    
T  8313266 gggggattccaagagtcctaaatgttgcttacttttctgcaaccaaaataggtaacttgctctgttgaaaacagataaaaattgcaatctctaaccctta 8313365  T
Q  183 aatcttttattt 194  Q
    | ||||||||||    
T  8313366 actcttttattt 8313377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 82 - 194
Target Start/End: Original strand, 17153026 - 17153139
Alignment:
Q  82 ggggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactct 180  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||  |||| |||||| ||    
T  17153026 ggggggattcaaagagtcataaccgctgcttacttttctgcaaccaaaaacaggtaacttgctttgttgcaaacagataaaaataacaatctctaaccct 17153125  T
Q  181 caaatcttttattt 194  Q
     |  ||||||||||    
T  17153126 tatctcttttattt 17153139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 163
Target Start/End: Complemental strand, 4786144 - 4785985
Alignment:
Q  8 gacatcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aat-tccaacaa-atgattaggggggattcgaagagtcctaac 104  Q
    |||||||||||||  ||||||||| ||  ||||||||||| |||||   ||||||| ||| |||||||| || | |||| |||||||||||| |||||||    
T  4786144 gacatcatcacttgtatagtctacctaagataaatgaacgtgacattgctgttatttaatatccaacaatataaataggagggattcgaagaatcctaac 4786045  T
Q  105 cgctgcttacatttctgcaacc-aaaacaggtaacttgctatgttgcaaacagataaaaa 163  Q
    |||||||||| ||||||||||| ||||||||||||||||| | ||||||| |||||||||    
T  4786044 cgctgcttacttttctgcaaccaaaaacaggtaacttgctctattgcaaatagataaaaa 4785985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 20582479 - 20582394
Alignment:
Q  85 gggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||||||| ||||||| ||||||||| |||||||||||||||||||| |||||||| ||||||||| |||||||||||||||    
T  20582479 gggattcgaagaatcctaactgctgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaatagataaaaattgcaa 20582394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 67 - 170
Target Start/End: Complemental strand, 140357 - 140254
Alignment:
Q  67 tccaacaaatgattaggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattg 166  Q
    |||||||||| | |||  ||||||| |||| |||| |||||| || ||||||||||||| ||||||||||||||||| |||||||||||||||||||| |    
T  140357 tccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatgg 140258  T
Q  167 caat 170  Q
    ||||    
T  140257 caat 140254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 1848105 - 1848188
Alignment:
Q  87 gattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||||| || |||||||||||||| |||||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  1848105 gattcgaagaatcataaccgctgcttacttttctgcaaccaaaacaggtaaacttgctctgtttcaaacagataaaaattgcaa 1848188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 166
Target Start/End: Complemental strand, 4579390 - 4579239
Alignment:
Q  16 cacttagatagtctacttagaataaatgaacgcgacatgaatgtta-ttaattccaacaaatgattaggggggattcgaagagtcctaaccgctgcttac 114  Q
    ||||||||||||||||||||||||| |||| | ||| ||| ||||| ||||||||||||||||| ||   |  ||| ||||| | || |||||| |  |     
T  4579390 cacttagatagtctacttagaataactgaatgtgacttgattgttaattaattccaacaaatgaatatatgaaatttgaagaattcttaccgctacaaat 4579291  T
Q  115 atttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattg 166  Q
    |||| ||||||||||| ||||||||||||||||| |||||||||||||||||    
T  4579290 atttatgcaaccaaaataggtaacttgctatgttacaaacagataaaaattg 4579239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 194
Target Start/End: Complemental strand, 7318572 - 7318387
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaa-tgattaggggggattcgaa-gagtcctaaccgct 108  Q
    |||||||||  ||||||||||||  |||| | ||||| |||||||||||||| |||||||||||| | | ||||||| |||| || ||||||||| || |    
T  7318572 tcatcacttgtatagtctacttaagataactaaacgcaacatgaatgttatttaattccaacaaaataaataggggg-attcaaaagagtcctaatcgtt 7318474  T
Q  109 gcttacatttctgcaaccaaaac-aggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttattt 194  Q
    | || | |||||||||||||||  | |||||||||| |||||||||||||||||||||||||| |||||| || |  ||||||||||    
T  7318473 gtttccttttctgcaaccaaaaagaagtaacttgctctgttgcaaacagataaaaattgcaatctctaacccttatctcttttattt 7318387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 169
Target Start/End: Complemental strand, 13418744 - 13418660
Alignment:
Q  86 ggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||| |||| ||||||||||||||||| || |||||| |||||||||| |||||||| |||||||||||||||||||||||||    
T  13418744 ggattcaaagaatcctaaccgctgcttactttgctgcaatcaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 13418660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 170
Target Start/End: Complemental strand, 17829866 - 17829707
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aat-tccaacaaatgattaggggggattcgaagagtcctaaccgctg 109  Q
    |||||||||  ||||||||||||  |||||| |||  ||||||||| ||||| ||| || ||||||| | ||||||| ||||||||| || ||||| |||    
T  17829866 tcatcacttgtatagtctacttaacataaataaacatgacatgaattttatttaatatctaacaaataaataggggg-attcgaagaatcttaaccactg 17829768  T
Q  110 cttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaat 170  Q
    ||||  ||||| |||||||||||| ||||||| | ||||||||||||||||||||| ||||    
T  17829767 cttaattttctccaaccaaaacagttaacttgttctgttgcaaacagataaaaattacaat 17829707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 8877646 - 8877559
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttac-atttctgcaaccaaaacaggtaa-cttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||| |||| ||||||||||||||||| |||| ||||||||||| |||||| |||||| |||||||||||||||||||||||||    
T  8877646 ggggattcaaagaatcctaaccgctgcttactatttttgcaaccaaaataggtaaacttgctctgttgcaaacagataaaaattgcaa 8877559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 10586835 - 10586985
Alignment:
Q  23 atagtctacttagaataaatgaacgcgacatgaatgttatt-aat-tccaacaaa-tgattaggggggattcgaagagtcctaaccgctgcttacatttc 119  Q
    ||||||||||||  |||| | |||||||||||||||||||| ||| ||||||||| | | || |||| |||| ||||||| ||||| |||||||| |||     
T  10586835 atagtctacttaagataactaaacgcgacatgaatgttatttaatatccaacaaaataaataagggg-attcaaagagtcttaaccactgcttacttttt 10586933  T
Q  120 tgcaacca-aaacaggtaacttgctatgttgcaaacagataaaaattgcaat 170  Q
    |||||||| ||||| ||| |||||| ||||||||||||||||||||||||||    
T  10586934 tgcaaccagaaacatgtatcttgctctgttgcaaacagataaaaattgcaat 10586985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 3329545 - 3329618
Alignment:
Q  98 tcctaaccgctgcttacatttctgcaaccaaaa-caggtaa-cttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||||||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||||    
T  3329545 tcctaaccgctgcttacttttctgcaaccaaaaacaagtaaacttgctatgttgcaaacagataaaaattgcaa 3329618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 195
Target Start/End: Original strand, 16297724 - 16297820
Alignment:
Q  100 ctaaccgctgcttacatttctgcaaccaaaac-aggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttattta 195  Q
    ||||||||||||||| |||||||||||||||  ||||||||| || ||||||||||| |||||||||||||| |||||| || || |||||| ||||    
T  16297724 ctaaccgctgcttacttttctgcaaccaaaaataggtaacttactctgttgcaaacatataaaaattgcaatttctaacccttaactcttttgttta 16297820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 8053937 - 8054016
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaa 162  Q
    |||||||| |||| ||||||| ||||||||| |||||||||||||||||||| |||||||||| ||||||| ||||||||    
T  8053937 ggggattcaaagaatcctaactgctgcttacttttctgcaaccaaaacaggtaaacttgctatattgcaaatagataaaa 8054016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 9131136 - 9131049
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||||||||| |||||||||| |||||| ||| ||||||| ||||||| ||||||||| | ||||||||| |||||||||||||    
T  9131136 gggggattcgaagaatcctaaccgcagcttacttttttgcaaccaaaaacagttaacttgctctattgcaaacaaataaaaattgcaa 9131049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 9574632 - 9574521
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctca 182  Q
    ||||||||| |||| ||||||| |||| |||| ||||| ||| |||| ||||| ||||||| | ||||||||||||||||||| |||| |||||| || |    
T  9574632 gggggattcaaagaatcctaactgctgtttacttttcttcaaacaaaccaggttacttgctctattgcaaacagataaaaattacaatttctaaccctta 9574533  T
Q  183 aatcttttattt 194  Q
    | ||||||||||    
T  9574532 actcttttattt 9574521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 115 - 170
Target Start/End: Complemental strand, 10648771 - 10648716
Alignment:
Q  115 atttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaat 170  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  10648771 atttctgcaaccaaaacatgtaacttgctttgttgcaaacagataaaaattgcaat 10648716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 6006222 - 6006072
Alignment:
Q  23 atagtctacttagaataaatgaacgcgacatgaatgttattaatt-ccaacaaatgattaggggggattcgaagagtcctaaccgctgcttacatttctg 121  Q
    |||| |||||||  |||||| |||||||||| ||| ||||| ||| ||||||||| | ||||  |  |||||| | || |||||||| ||||| ||||||    
T  6006222 atagcctacttaagataaataaacgcgacattaatcttatttatttccaacaaataaataggtag--ttcgaacaatcttaaccgctacttacttttctg 6006125  T
Q  122 caaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatcta 175  Q
    | ||||||||||||||||| || |||||||||||||| ||||||||||| ||||    
T  6006124 ccaccaaaacaggtaacttactctgttgcaaacagat-aaaattgcaatctcta 6006072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 18368852 - 18368938
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgca 168  Q
    ||||||||| | || ||||||||| | ||||| ||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  18368852 gggggattcaaggaatcctaaccgtttcttacttttctacaaccaaaagcaggtaacttgctttgttgcaaacagataaaaattgca 18368938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 19153522 - 19153434
Alignment:
Q  83 gggggattcgaagagtcct--aaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||||||||| ||||  ||||| || |||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  19153522 gggggattcgaagaatcctctaaccgatg-ttacttttctgcaaccaaaaacaggtaacttgttatgttgcaaacagataaaaattgcaa 19153434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 20752921 - 20752833
Alignment:
Q  83 gggggattcgaagagtcct--aaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||||||||| ||||  ||||| || |||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  20752921 gggggattcgaagaatcctctaaccgatg-ttacttttctgcaaccaaaaacaggtaacttgttatgttgcaaacagataaaaattgcaa 20752833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 166
Target Start/End: Complemental strand, 5108791 - 5108706
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggt-aacttgctatgttgcaaacagataaaaattg 166  Q
    ||||||||| |||| ||||||||||||||||| ||||||||||||||| || || |||||||| | ||||||||||||||||||||    
T  5108791 gggggattcaaagaatcctaaccgctgcttacttttctgcaaccaaaatcaagtaaacttgctctcttgcaaacagataaaaattg 5108706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 1587945 - 1587820
Alignment:
Q  44 aacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgc 142  Q
    ||||||| |||||||||||| |||| ||||||| ||     |||||||| |||| || || ||||||||||| ||||||||||||| |  ||||||||||    
T  1587945 aacgcgagatgaatgttatttaattacaacaaaagagatatggggattcaaagattcatatccgctgcttacttttctgcaaccaaga--ggtaacttgc 1587848  T
Q  143 tatgttgcaaacagataaaaattgcaat 170  Q
    | ||||||||||| ||||||||||||||    
T  1587847 tctgttgcaaacaaataaaaattgcaat 1587820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 152
Target Start/End: Complemental strand, 4819145 - 4818995
Alignment:
Q  8 gacatcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtta-ttaat-tccaacaa-atgattaggggggattcgaagagtcctaac 104  Q
    |||||||||||||  ||||||||| ||  |||||||||||||||||   ||||| ||||| |||||||| || | |||| |||||||||||| |||||||    
T  4819145 gacatcatcacttgtatagtctacctaagataaatgaacgcgacattgctgttatttaatatccaacaatataaataggagggattcgaagaatcctaac 4819046  T
Q  105 --cgctgcttacatttctgcaacc-aaaacaggtaacttgctatgttgcaa 152  Q
      |||||||||| ||||||||||| |||| |||||||||||| | ||||||    
T  4819045 cgcgctgcttacttttctgcaaccaaaaataggtaacttgctctattgcaa 4818995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 9731516 - 9731587
Alignment:
Q  99 cctaaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||||||||| || | |||||||||||||||    
T  9731516 cctaaccgctgcttacttttatgcaaccaaaaacaggtaacttgctatgttacacatagataaaaattgcaa 9731587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 9864129 - 9864275
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtt-attaattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    ||||||||||||||||||||||| ||||| |||||||| | ||| |||| ||||||||| |||||||| | | |||||||| |||| | ||||| |  |     
T  9864129 tcatcacttagatagtctacttaaaataattgaacgcggcttgactgttaattaattcccacaaatgaatggaggggattcaaagaatgctaactgtcgt 9864228  T
Q  111 ttacatttctgcaaccaaaacaggtaac-ttgctatgttgcaaacaga 157  Q
    | | | |||||||| ||||||||||||| ||||| |||||||||||||    
T  9864229 tgata-ttctgcaatcaaaacaggtaactttgctttgttgcaaacaga 9864275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 17077325 - 17077254
Alignment:
Q  99 cctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||||||||||| ||||||||| |||||||||| ||||| || | |||||||||||||||||||||||    
T  17077325 cctaaccgctgcttacttttctgcaaacaaaacaggtaaacttactctattgcaaacagataaaaattgcaa 17077254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 11803293 - 11803211
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaatt 165  Q
    ||||||||||| | |||||||||||| |||| | |||||||||||||||||| |||||||| |||||||||||  ||||||||    
T  11803293 ggggattcgaataatcctaaccgctggttacttctctgcaaccaaaacaggtaaacttgctctgttgcaaacaactaaaaatt 11803211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 193
Target Start/End: Original strand, 7492163 - 7492248
Alignment:
Q  110 cttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgc-aatatctaactctcaaatcttttatt 193  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||| |||||||||| ||| |||||| || || |||||||||    
T  7492163 cttacttttctgcaaccaaaaacaggtaacttgctctgttgcaaacagttaaaaattgcaaatctctaacccttaactcttttatt 7492248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 2564044 - 2563960
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaa-cttgctatgttgcaaacagataaaaatt 165  Q
    |||||||||||||  ||||||||||| ||||| ||||||||| | ||| ||||||| |||||| |||||||||||||||||||||    
T  2564044 gggggattcgaaggatcctaaccgctacttacttttctgcaaactaaagcaggtaaacttgctctgttgcaaacagataaaaatt 2563960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 175
Target Start/End: Complemental strand, 6042675 - 6042583
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatcta 175  Q
    |||||||| |||| ||||||||||||||||  ||||||||||| |||| ||||||  | || ||||||||||| ||||||||||||| |||||    
T  6042675 ggggattcaaagaatcctaaccgctgcttatttttctgcaaccaaaaaaaggtaaacttctctgttgcaaacatataaaaattgcaacatcta 6042583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 166
Target Start/End: Original strand, 16058907 - 16058991
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaattg 166  Q
    ||||||||||||| ||||||| ||||||||| || |||||||| |||||| || || ||||| ||||||||||||||||||||||    
T  16058907 ggggattcgaagaatcctaacagctgcttactttactgcaaccaaaaacaagtaaatttgctctgttgcaaacagataaaaattg 16058991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 16306987 - 16306896
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtt-attaattccaacaaatgattaggggggattcgaagagtcctaa 103  Q
    |||||||||||||||| | ||||||||||||||||||||| | | |||| ||| |||||||||||||| ||| |||||||| |||| ||||||    
T  16306987 tcatcacttagatagtatgcttagaataaatgaacgcgac-ttactgttaattcattccaacaaatgaatagaggggattcaaagaatcctaa 16306896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 166
Target Start/End: Complemental strand, 16365934 - 16365847
Alignment:
Q  80 taggggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggtaacttgctatgttgcaaacagataaaaattg 166  Q
    |||||| |||||||||| ||||||||||||||||| ||| ||||||| |||||| ||||||||||  | |||||| |||| |||||||    
T  16365934 taggggagattcgaagaatcctaaccgctgcttacttttttgcaaccaaaaacatgtaacttgctcagatgcaaatagatcaaaattg 16365847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 9245475 - 9245369
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtta-ttaattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    ||||| |||||||||||||||| ||| || | |||||||| ||| | ||| ||||||||| ||||| | |||||||||||| |||| ||||||| |||||    
T  9245475 tcatcccttagatagtctacttcgaacaactaaacgcgacttgactattaattaattccagcaaataaataggggggattcaaagaatcctaactgctgc 9245376  T
Q  111 ttacatt 117  Q
    | |||||    
T  9245375 taacatt 9245369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 15869822 - 15869740
Alignment:
Q  81 aggggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggtaacttgctatgttgcaaacagataaaa 162  Q
    ||||||||||| |||||||||||||| || |||| ||| ||||||| ||||||||||||||  | | ||||||||||||||||    
T  15869822 aggggggattcaaagagtcctaaccgttgtttacttttatgcaaccaaaaacaggtaactttttctattgcaaacagataaaa 15869740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 16223943 - 16224036
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtta-ttaattccaacaaatgattaggggggattcgaagagtcctaacc 105  Q
    ||||| |||||||||||| ||| |||||| |||||||||| | | ||||| ||||||||||||||||| ||| |||||||| |||| ||||||||    
T  16223943 tcatcgcttagatagtctgcttggaataattgaacgcgactt-actgttaattaattccaacaaatgaatagaggggattcaaagaatcctaacc 16224036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 163
Target Start/End: Complemental strand, 6013890 - 6013739
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaa-tgattaggggggattcgaagagtcctaaccgctg 109  Q
    |||||||||  |||||||| |||  |||| | |||| ||||||||||||||| || ||||||||| | | ||| ||| |||| ||||||| |||||| ||    
T  6013890 tcatcacttgtatagtctatttatgataactaaacgggacatgaatgttatttaaatccaacaaaataaatagaggg-attcaaagagtcataaccgttg 6013792  T
Q  110 cttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaa 163  Q
    || || ||||||||||| ||||| |||| ||||| ||||||||||| |||||||    
T  6013791 ctcacttttctgcaacc-aaacatgtaaattgctttgttgcaaacaaataaaaa 6013739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 11221054 - 11221126
Alignment:
Q  98 tcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaat 170  Q
    |||||||| ||||| ||||||||  || ||||||| ||||||| || ||||||||||| ||||||||||||||    
T  11221054 tcctaaccactgctaacatttctaaaatcaaaacaagtaactttctctgttgcaaacaaataaaaattgcaat 11221126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 39273053 - 39273137
Alignment:
Q  87 gattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||||  ||||||||||||||||| ||||||||||| |||| |||| |||||||| ||||||||| |||| ||| ||||||    
T  39273053 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaataggtaaacttgctctgttgcaaatagattaaatttgcaa 39273137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 170
Target Start/End: Original strand, 10584341 - 10584447
Alignment:
Q  70 aacaaatgattaggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt------aacttgctatgttgcaaacagataaaaa 163  Q
    ||||||||| ||| ||| |||| || | || |||||| |||| |||||||||||||||||||||||      || ||| | |||||||||||||||||||    
T  10584341 aacaaatgaatagagggaattcaaaaaatcataaccgttgctaacatttctgcaaccaaaacaggtaatttaaatttgttttgttgcaaacagataaaaa 10584440  T
Q  164 ttgcaat 170  Q
    |||||||    
T  10584441 ttgcaat 10584447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 2350645 - 2350703
Alignment:
Q  108 tgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattg 166  Q
    ||||||| ||| |||||||||||||||||| ||| | ||||| ||||||||||||||||    
T  2350645 tgcttacttttttgcaaccaaaacaggtaatttgatgtgttgtaaacagataaaaattg 2350703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 4449192 - 4449110
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaactt-gctatgttgcaaacagataaaaatt 165  Q
    |||||||| |||| | |||||||||| |||| ||| ||||||||||| |||||| || ||| || ||||||||||||||||||    
T  4449192 ggggattcaaagaattctaaccgctgtttacttttttgcaaccaaaataggtaaattcgctctgctgcaaacagataaaaatt 4449110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 13277716 - 13277630
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||| |||| |||||| |||| ||||| ||||| |||||||||||||| || | ||| | | |||||||||||||||||||||    
T  13277716 ggggattcaaagaatcctaatcgctacttacttttctacaaccaaaacaggtcaattcgctctatagcaaacagataaaaattgcaa 13277630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 22067128 - 22067198
Alignment:
Q  98 tcctaaccgctgcttacatttctgcaaccaaaacaggtaactt-gctatgttgcaaacagataaaaattgc 167  Q
    ||||||||| ||||||| |||||||||||||||||||||| ||  || ||||||| ||| |||||||||||    
T  22067128 tcctaaccgttgcttacttttctgcaaccaaaacaggtaaattctctttgttgcagacatataaaaattgc 22067198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 21230558 - 21230509
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtta 61  Q
    |||| |||||||||||||||||||||||| |||||||||| ||| |||||    
T  21230558 tcattacttagatagtctacttagaataactgaacgcgacttgattgtta 21230509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 177
Target Start/End: Original strand, 3190861 - 3191027
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaa-tgattagggggg-attcgaagagtcctaaccgct 108  Q
    |||||||||  ||||||||||||  |||| | || | ||||||| ||||||| || ||||||||| | | |||||||| |||| || |||||||  ||||    
T  3190861 tcatcacttgtatagtctacttaagataactaaatgtgacatgactgttatttaaatccaacaaaataaatagggggggattcaaatagtcctactcgct 3190960  T
Q  109 gcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaac 177  Q
     ||||| ||||||||||| ||| || ||||||| | ||||||||||| ||||||||| |||| ||||||    
T  3190961 acttacttttctgcaacc-aaatagataacttg-tctgttgcaaacatataaaaattacaatctctaac 3191027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 4986892 - 4986841
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt 63  Q
    |||||||||| ||||||||||||  |||| | ||||||||||||||||||||    
T  4986892 tcatcacttatatagtctacttaagataactaaacgcgacatgaatgttatt 4986841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 4990990 - 4990939
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt 63  Q
    |||||||||| ||||||||||||  |||| | ||||||||||||||||||||    
T  4990990 tcatcacttatatagtctacttaagataactaaacgcgacatgaatgttatt 4990939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 8978880 - 8978967
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||  |||| ||||||| ||||||||  ||||||||||| ||||||||| |||||| | | |||||||||||| ||||||||||    
T  8978880 ggggatttaaagaatcctaactgctgcttatttttctgcaaccaaaaacaggtaaacttgttctattgcaaacagatgaaaattgcaa 8978967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 194
Target Start/End: Complemental strand, 1584429 - 1584346
Alignment:
Q  109 gcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttattt 194  Q
    |||||| ||||| ||||||||  |||||||||||| | ||||||| |||||||||||||||| ||||||  | || ||||||||||    
T  1584429 gcttacttttctacaaccaaat-aggtaacttgcttt-ttgcaaaaagataaaaattgcaatctctaacctttaactcttttattt 1584346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 5797734 - 5797682
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaa 137  Q
    |||||||| |||| |||||||||||||| ||| |||||||| ||||||||||||    
T  5797734 ggggattcaaagaatcctaaccgctgctaaca-ttctgcaatcaaaacaggtaa 5797682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 1e-43; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 204
Target Start/End: Original strand, 17171366 - 17171550
Alignment:
Q  19 ttagatagtctacttagaataaatgaacgcgacatgaatgtta-ttaattccaacaaatgattaggggggattcgaagagtcctaaccgctgcttacatt 117  Q
    |||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| ||  | |||||||||   ||||| | | ||||||||||    
T  17171366 ttagatagtctacttagaataactgaacgcgacatgactgttaattaattccaacaaatgaatatagaggattcgaa---tcctagctgatgcttacatt 17171462  T
Q  118 tctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttattta-tattttgtt 204  Q
    | |||||||||| ||||||||||||| ||||||||  |||||||||||||||| |||||| ||||| ||||||||||| |||||||||    
T  17171463 tttgcaaccaaagcaggtaacttgctctgttgcaactagataaaaattgcaatctctaaccctcaactcttttatttattattttgtt 17171550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 48 - 194
Target Start/End: Complemental strand, 26121124 - 26120978
Alignment:
Q  48 cgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatg 146  Q
    |||||||||||||||| ||||||||||||| | |||||| |||||||||| | |||||| ||||||||||||||||||| |||||||||| ||| |||||    
T  26121124 cgacatgaatgttatttaattccaacaaattaataggggtgattcgaagaattctaaccactgcttacatttctgcaac-aaaacaggtatctttctatg 26121026  T
Q  147 ttgcaaacagataaaaattgcaatatctaactctcaaatcttttattt 194  Q
     ||||||||||||||||||  |||||||||| ||||| ||||||||||    
T  26121025 ctgcaaacagataaaaattaaaatatctaaccctcaactcttttattt 26120978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 52 - 196
Target Start/End: Complemental strand, 36175390 - 36175245
Alignment:
Q  52 atgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgc 150  Q
    |||||||||||| ||||||||||||| | |||| | ||||| |||| || |||||||| ||||| ||||| |||||||||||||||||||||| |||||     
T  36175390 atgaatgttatttaattccaacaaataaataggagagattcaaagaatcataaccgcttcttacttttctacaaccaaaacaggtaacttgctttgttga 36175291  T
Q  151 aaacagataaaaattgcaatatctaactctcaaatcttttatttat 196  Q
    |||||||||||||||||||| |||||| ||||| ||||||||||||    
T  36175290 aaacagataaaaattgcaatctctaaccctcaactcttttatttat 36175245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 169
Target Start/End: Original strand, 17474448 - 17474605
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    |||||||||||||| |||||||||||||| |||||||||| ||  ||||||| ||||||||||||||| | ||||| |||  |||| |||||||||||||    
T  17474448 tcatcacttagataatctacttagaataactgaacgcgacttggctgttatttaattccaacaaatgaattggggg-attataagaatcctaaccgctgc 17474546  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    | |||||| |||||||||||||| |||| |  ||||||||||||||| |||||||||||    
T  17474547 taacatttttgcaaccaaaacagataacctattatgttgcaaacagaaaaaaattgcaa 17474605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 165
Target Start/End: Complemental strand, 17635574 - 17635421
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    ||||||||||||||||||||||||||||| | ||||| || ||| ||||||| ||||||||||||||||  |||||||||| |||| |  ||||||| ||    
T  17635574 tcatcacttagatagtctacttagaataactaaacgcaacttgactgttatttaattccaacaaatgatg-ggggggattcaaagaatgataaccgcggc 17635476  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaatt 165  Q
    | |||||||||||||||||||||||||  || | | |||||||||||||||||||    
T  17635475 taacatttctgcaaccaaaacaggtaatatgttgtattgcaaacagataaaaatt 17635421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 24266759 - 24266938
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaa-tgattaggggggattcgaagagtcctaaccgctg 109  Q
    |||||||||| ||||||||||||  |||| | |||  ||||||||||| ||| ||||||| |||| | | ||||| ||||||||||||||||||||||||    
T  24266759 tcatcacttatatagtctacttaagataactaaacatgacatgaatgtcatttaattccatcaaaataaatagggaggattcgaagagtcctaaccgctg 24266858  T
Q  110 cttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttatt 193  Q
    ||||| |||||| ||||||| |||||  |||||| |||| |||||||||||||||||||||||||||| || || |||||||||    
T  24266859 cttac-tttctgtaaccaaa-caggt--cttgctttgttacaaacagataaaaattgcaatatctaacccttaactcttttatt 24266938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 24343390 - 24343569
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaa-tgattaggggggattcgaagagtcctaaccgctg 109  Q
    |||||||||| ||||||||||||  |||| | |||  ||||||||||| ||| ||||||| |||| | | ||||| ||||||||||||||||||||||||    
T  24343390 tcatcacttatatagtctacttaagataactaaacatgacatgaatgtcatttaattccatcaaaataaatagggaggattcgaagagtcctaaccgctg 24343489  T
Q  110 cttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttatt 193  Q
    ||||| |||||| ||||||| |||||  |||||| |||| |||||||||||||||||||||||||||| || || |||||||||    
T  24343490 cttac-tttctgtaaccaaa-caggt--cttgctttgttacaaacagataaaaattgcaatatctaacccttaactcttttatt 24343569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 24167387 - 24167541
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    ||||||||||||||||||||||||||||| | |||||||| ||| ||||||| |||| |||||||||| ||| |||||||| |||| ||||||| |||||    
T  24167387 tcatcacttagatagtctacttagaataacttaacgcgacttgattgttattcaatttcaacaaatgaatagtggggattcaaagaatcctaactgctgc 24167486  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattg 166  Q
    | ||| ||||||||| |||| | |||| ||  | ||||||||||||||||||||||    
T  24167487 taaca-ttctgcaacaaaaaaaagtaatttattttgttgcaaacagataaaaattg 24167541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 85 - 169
Target Start/End: Original strand, 20744545 - 20744630
Alignment:
Q  85 gggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||||||| ||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20744545 gggattcgaagaatcctaaccgctgcttacttttctacaaccaaaacaggtaaacttgctatgttgcaaacagataaaaattgcaa 20744630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 190
Target Start/End: Complemental strand, 24260757 - 24260633
Alignment:
Q  67 tccaacaaatgattaggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattg 166  Q
    |||||||||||| ||| |||||||| | || || |||||||| || |||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  24260757 tccaacaaatgaatagaggggattcaaggaatcataaccgctcctaacatttctgcaaccaaaataggtaacttgctctgttgcaaacagataaaaattg 24260658  T
Q  167 c-aatatctaactctcaaatctttt 190  Q
    | ||| |||||| ||||| ||||||    
T  24260657 caaatctctaaccctcaactctttt 24260633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 24265313 - 24265443
Alignment:
Q  49 gacatgaatgttatt-aattccaacaaa-tgattaggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatg 146  Q
    ||||||| ||||||| || ||||||||| | | ||||||| |||| || ||||||||||||||||||| |||||||||| |||  |||||||||||| |     
T  24265313 gacatgactgttatttaaatccaacaaagtaaatagggggaattcaaatagtcctaaccgctgcttacttttctgcaactaaataaggtaacttgcttta 24265412  T
Q  147 ttgcaaacagataaaaattgcaatatctaac 177  Q
    |||||||||||||||||||||||||||||||    
T  24265413 ttgcaaacagataaaaattgcaatatctaac 24265443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 24341944 - 24342074
Alignment:
Q  49 gacatgaatgttatt-aattccaacaaa-tgattaggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatg 146  Q
    ||||||| ||||||| || ||||||||| | | ||||||| |||| || ||||||||||||||||||| |||||||||| |||  |||||||||||| |     
T  24341944 gacatgactgttatttaaatccaacaaagtaaatagggggaattcaaatagtcctaaccgctgcttacttttctgcaactaaataaggtaacttgcttta 24342043  T
Q  147 ttgcaaacagataaaaattgcaatatctaac 177  Q
    |||||||||||||||||||||||||||||||    
T  24342044 ttgcaaacagataaaaattgcaatatctaac 24342074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 194
Target Start/End: Original strand, 18208054 - 18208234
Alignment:
Q  14 atcacttagatagtctacttagaataaatgaacgcgacatgaatgtta-ttaattccaacaaatgattaggggggattcgaagagtcctaaccgctgctt 112  Q
    |||||||  |||||| ||||||  ||||| |||||||||||||||||| ||||||||||||||  |    ||||||||||||||||  |||| ||| |||    
T  18208054 atcacttgtatagtcaacttaggctaaataaacgcgacatgaatgttatttaattccaacaaaatacatagggggattcgaagagttgtaactgctactt 18208153  T
Q  113 acatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttattt 194  Q
    || ||||||||||| |||||||||||||||| |  ||||||||||||||||||||||  || ||| || || ||||||||||    
T  18208154 acttttctgcaacc-aaacaggtaacttgctctactgcaaacagataaaaattgcaacctccaacccttaactcttttattt 18208234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 26121157 - 26121285
Alignment:
Q  44 aacgcgacatgaatgtt-attaattccaacaaatgattaggggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggtaacttg 141  Q
    |||||| |||||||||| |||||||||||||||  | |||||||||||| |||| |||||||| || ||||| |||||| |||| |||| || |||||||    
T  26121157 aacgcggcatgaatgttgattaattccaacaaagaaataggggggattcaaagaatcctaaccactacttacttttctgtaaccaaaaatagataacttg 26121256  T
Q  142 ctatgttgcaaacagataaaaattgcaat 170  Q
    || | ||||||||||||||||||| ||||    
T  26121257 ctctcttgcaaacagataaaaattacaat 26121285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 165
Target Start/End: Complemental strand, 17432103 - 17432025
Alignment:
Q  88 attcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaatt 165  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||| || |||||||| ||||||||||||| |||||||    
T  17432103 attcgaagaatcctaaccgctgcttacttttctgcaaccaaaacaagtaaacttgctctgttgcaaacagaaaaaaatt 17432025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 12 - 194
Target Start/End: Complemental strand, 22755820 - 22755635
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aat-tccaacaaatgattaggggggattcgaagagtcctaaccgctg 109  Q
    |||||||||  ||||||||||||  |||||| |||  ||||||||||||||| ||| ||||| |||| | ||||||| |||| |||| || ||| || ||    
T  22755820 tcatcacttgtatagtctacttaagataaataaacatgacatgaatgttatttaatatccaagaaataaatagggggaattctaagaatcataatcgttg 22755721  T
Q  110 cttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattg-caatatctaactctcaaatcttttattt 194  Q
     |||| ||| || |||||||||  |||||||||| ||||||||||||||||||||||  ||| |||||| || || ||||||||||    
T  22755720 attacttttttggaaccaaaactagtaacttgctctgttgcaaacagataaaaattgtaaatctctaacccttaactcttttattt 22755635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 169
Target Start/End: Complemental strand, 15691074 - 15690916
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aat-tccaaca-aatgattaggggggattcgaagagtcctaaccgct 108  Q
    |||||| ||| ||||| ||| ||||||| || | |||||||||| ||||||| ||| ||||||| ||| | ||||||| ||||||||| |||||||  ||    
T  15691074 tcatcatttatatagtttacctagaatagataatcgcgacatgactgttatttaatatccaacataataaataggggg-attcgaagaatcctaaca-ct 15690977  T
Q  109 gcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||| |||||||||||||||||||||| ||||| |||| | |||| |||||||||||||    
T  15690976 gcttacttttctgcaaccaaaacaggtaatttgctctgttacgaacaaataaaaattgcaa 15690916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 167
Target Start/End: Complemental strand, 28664986 - 28664902
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaactt-gctatgttgcaaacagataaaaattgc 167  Q
    ||||||||||||| || |||||| ||||||  |||||||||||||||||||||| || ||| |||||||||||||||||||||||    
T  28664986 ggggattcgaagaatcttaaccgttgcttatttttctgcaaccaaaacaggtaaattcgctctgttgcaaacagataaaaattgc 28664902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 24245417 - 24245499
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaat 164  Q
    |||||||||||||| ||||||||| ||||||| |||||||||| ||||||||| |||||||| ||||| ||||| ||||||||    
T  24245417 gggggattcgaagaatcctaaccgttgcttacttttctgcaactaaaacaggtaaacttgctttgttggaaacaaataaaaat 24245499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 194
Target Start/End: Original strand, 24661989 - 24662161
Alignment:
Q  23 atagtctacttagaataaatgaacgcgacatgaatgtta-ttaattccaacaaatgat-taggggggattcgaagagtcctaaccgctgcttacatttct 120  Q
    ||||||||||||  |||| | ||||| |||||||| ||| ||| ||||||||||  || || |||||| |||||||||| |||||||| ||||| || ||    
T  24661989 atagtctacttaagataattaaacgcaacatgaatcttatttacttccaacaaaatatatatgggggaatcgaagagtcttaaccgctacttactttact 24662088  T
Q  121 gcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttattt 194  Q
    |||| ||||||| |||||||||| |||| ||||||  ||||||||| |||  ||||| || || ||||||||||    
T  24662089 gcaa-caaaacaagtaacttgctctgtttcaaacaactaaaaattgaaatcgctaacccttaactcttttattt 24662161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 155
Target Start/End: Complemental strand, 34128861 - 34128788
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaaca 155  Q
    |||||||||||||| ||||||||| ||||||| |||||||||||||||||||| |||||||| | |||||||||    
T  34128861 gggggattcgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaacttgctctattgcaaaca 34128788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 166
Target Start/End: Original strand, 17314987 - 17315070
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaactt-gctatgttgcaaacagataaaaattg 166  Q
    |||||||| |||| || |||||||||||||| ||| ||||||||||||||||||||| ||| | ||||||| ||||||||||||    
T  17314987 ggggattcaaagaatcttaaccgctgcttacttttttgcaaccaaaacaggtaacttcgctctattgcaaaaagataaaaattg 17315070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 166
Target Start/End: Complemental strand, 18937977 - 18937889
Alignment:
Q  80 taggggggattcgaagagtcct--aaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattg 166  Q
    |||||||||||| |||| ||||  |||| ||| |||||||||||||||||||| || |||||||||| ||||||||||||||||||||||    
T  18937977 taggggggattcaaagaatcctctaaccactg-ttacatttctgcaaccaaaaacatgtaacttgctctgttgcaaacagataaaaattg 18937889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 166
Target Start/End: Complemental strand, 20858896 - 20858814
Alignment:
Q  85 gggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaactt-gctatgttgcaaacagataaaaattg 166  Q
    ||||||||| || ||||||||||||||||| ||| ||||||||||| |||||| || ||| |||||||||| |||||||||||    
T  20858896 gggattcgacgaatcctaaccgctgcttacttttatgcaaccaaaataggtaaattcgctttgttgcaaaccgataaaaattg 20858814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 169
Target Start/End: Original strand, 20315305 - 20315390
Alignment:
Q  85 gggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaa-cttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||  ||||| |||| |||||  || ||||||||||||| |||| |||||| |||||||||||||||||||||||||    
T  20315305 gggattcgaagaaccctaatcgcttcttactattttgcaaccaaaacatgtaaacttgctttgttgcaaacagataaaaattgcaa 20315390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 86 - 166
Target Start/End: Complemental strand, 24140658 - 24140577
Alignment:
Q  86 ggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattg 166  Q
    ||||| ||||| ||||||||| ||||||| ||||||||||||||| |||| |||||||| ||| ||| ||||||||||||||    
T  24140658 ggatttgaagaatcctaaccgttgcttacttttctgcaaccaaaataggtaaacttgctctgtcgcacacagataaaaattg 24140577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 20563969 - 20564053
Alignment:
Q  87 gattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||||| ||||||| ||| ||||| ||||||||||| |||||| || || ||||| |||||||||||||||||||||||||    
T  20563969 gattcgaagaatcctaactgcttcttacttttctgcaaccaaaaacaagtaaatttgctctgttgcaaacagataaaaattgcaa 20564053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 24852030 - 24852121
Alignment:
Q  67 tccaacaaatgattaggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaac-ttgctatgttgcaaacagat 158  Q
    |||||||||||| ||| |||||||| |||| |||||||| |||||  || |||| ||||||||||||||||| ||||| ||||||||||||||    
T  24852030 tccaacaaatgaatagaggggattcaaagaatcctaaccactgctatca-ttctacaaccaaaacaggtaactttgctctgttgcaaacagat 24852121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 16523677 - 16523764
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaac-caaaacaggtaactt-gctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||| |||| ||||||||||||||||| |||||  |||  ||||||||||| || ||| |||||||||||||||||||||||||    
T  16523677 ggggattcaaagaatcctaaccgctgcttacttttctataacaaaaaacaggtaaattcgctctgttgcaaacagataaaaattgcaa 16523764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 191
Target Start/End: Original strand, 19283727 - 19283837
Alignment:
Q  80 taggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactc 179  Q
    ||||||||||| ||| |||| |||||||||||||  ||||| ||||| ||||||||||||| || | ||||||| |||| ||||||| ||| |||||| |    
T  19283727 taggggggatttgaaaagtcttaaccgctgcttaattttctacaacc-aaacaggtaactttctctattgcaaatagattaaaattgtaatctctaaccc 19283825  T
Q  180 tcaaatctttta 191  Q
    | || |||||||    
T  19283826 ttaactctttta 19283837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 34487930 - 34487769
Alignment:
Q  13 catcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgct 111  Q
    ||||||||  ||||||||||||  |||| | || || |||||||||||||| |||||| |||||  |    ||||||||| ||||||||||||| ||       
T  34487930 catcacttgaatagtctacttaagataactaaaagcaacatgaatgttatttaattccgacaaaatagatagggggattctaagagtcctaaccacta-- 34487833  T
Q  112 tacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaac 177  Q
     || |||||||||||||| || |||| ||||| ||||| |||||||||||||||||||| ||||||    
T  34487832 -acttttctgcaaccaaa-catgtaaattgctctgttgaaaacagataaaaattgcaatctctaac 34487769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 15470179 - 15470082
Alignment:
Q  67 tccaacaaatgattaggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaatt 165  Q
    |||||||||| | ||| |||||||| |||| |||||||||| ||| | |||| ||||| |||||  ||||||||||| |||||||||||||| ||||||    
T  15470179 tccaacaaataaatagaggggattcaaagaatcctaaccgccgctaatattt-tgcaatcaaaattggtaacttgctctgttgcaaacagatcaaaatt 15470082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 15375768 - 15375857
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaac-aggt-aacttgctatgttgcaaacagataaaaattgcaat 170  Q
    |||||||||||||| ||||||||| | ||||| ||| |||||||||||  |||  |||||||| ||||||||||| ||||||||||||||    
T  15375768 gggggattcgaagaatcctaaccgttacttacttttatgcaaccaaaaataggcgaacttgctctgttgcaaacaaataaaaattgcaat 15375857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 161
Target Start/End: Complemental strand, 26835872 - 26835796
Alignment:
Q  85 gggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaactt-gctatgttgcaaacagataaa 161  Q
    |||||||||||| ||||||| ||||| ||| ||||||||| |||||||||||| || ||| |||||||||||||||||    
T  26835872 gggattcgaagaatcctaactgctgcatacttttctgcaa-caaaacaggtaaattcgctctgttgcaaacagataaa 26835796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 23388724 - 23388810
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaactt-gctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| ||||||| |||||||   ||||| ||| |||| ||||||| || ||| |||||||||||||| ||||||||||    
T  23388724 ggggattcgaagaatcctaactgctgctttactttctccaatcaaagcaggtaaattcgctctgttgcaaacagatgaaaattgcaa 23388810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 39434676 - 39434626
Alignment:
Q  87 gattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaa 137  Q
    |||||||||| ||||||||| ||||||| ||||||||| ||||||||||||    
T  39434676 gattcgaagaatcctaaccgttgcttacttttctgcaaacaaaacaggtaa 39434626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 26314016 - 26313923
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtt-attaattccaacaaatgattaggggggattcgaagagtcctaac 104  Q
    |||||||||||| |||||||||| ||||| ||||||| || ||| |||| |||||||  || |||||| ||| || ||||| |||| |||||||    
T  26314016 tcatcacttagacagtctacttaaaataattgaacgcaacttgactgttaattaattttaagaaatgaatagaggagattcaaagaatcctaac 26313923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 1e-43; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 226
Target Start/End: Complemental strand, 17890234 - 17890017
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    ||||||||||| |||| ||||||  |||| | ||| ||| |||||||||||| ||||||||||||||| |||||||||||  |||| || ||| || |||    
T  17890234 tcatcacttaggtagtatacttaagataactaaacacgaaatgaatgttatttaattccaacaaatgaataggggggattgaaagaatcttaatcgttgc 17890135  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatc-taactctcaaatcttttatttatattttgtt-cacc 208  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  || || |  |||| ||||||||||||||||||||  |||    
T  17890134 ttacatttctgcaaccaaaacaggtaacttgctctgttgcaaacatataaaaattgcaacttcttatccttcaactcttttatttatattttgttaaacc 17890035  T
Q  209 aaataagtaacgtaaatt 226  Q
    |||||| ||||| |||||    
T  17890034 aaataattaacgcaaatt 17890017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 12 - 194
Target Start/End: Complemental strand, 32085760 - 32085577
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaa-tgattaggggggattcgaagagtcctaaccgctg 109  Q
    |||||||||  || |||||||||  |||| | |||||||||||||||||||| || ||||||||| | | ||||||| |||  |||||||||||||||||    
T  32085760 tcatcacttgtattgtctacttaagataactaaacgcgacatgaatgttatttaaatccaacaaaataaataggggg-atttaaagagtcctaaccgctg 32085662  T
Q  110 cttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttattt 194  Q
    ||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| || ||||||||||    
T  32085661 cttacttttctgcaaccaaaccaggtaacttgctctgttgcaaacagataaaaattgcaatctctaactcttaactcttttattt 32085577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 12 - 169
Target Start/End: Complemental strand, 45553424 - 45553268
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttat-taattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    |||||||||||||| |||||||||||||| |||||| ||  ||| |||||  |||||||||||||||| ||||||| |||| |||| |||||||||||||    
T  45553424 tcatcacttagataatctacttagaataattgaacgtgatttgactgttaaataattccaacaaatgaataggggg-attcaaagaatcctaaccgctgc 45553326  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    | || || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45553325 taacgtt-ctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaa 45553268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 15 - 240
Target Start/End: Original strand, 45621687 - 45621912
Alignment:
Q  15 tcacttagatagtctacttagaataaatgaacgcgacatgaatgtta-ttaattccaacaaatgattaggggggattcgaagagtcctaaccgctgctta 113  Q
    ||||||||||||||||||| |||||| |||| | ||| ||| ||||| ||||||||||||||||| ||| |||||||| |||| || ||||||| ||| |    
T  45621687 tcacttagatagtctacttggaataattgaatgtgacttgactgttaattaattccaacaaatgaatagaggggattcaaagaatcttaaccgccgctaa 45621786  T
Q  114 catttctgcaaccaaaacaggtaa-cttgctatgttgcaaacagataaaaattgcaatatctaactctca-aatcttttatttatattttgttcaccaaa 211  Q
    |||| |||||| ||||||| |||| |||||||||||||||||||||||||||| |||  |||||| || |  ||||||||||| |||||||||||  |||    
T  45621787 catt-ctgcaatcaaaacaagtaaacttgctatgttgcaaacagataaaaattacaaactctaacccttatcatcttttattt-tattttgttcaaaaaa 45621884  T
Q  212 taagtaacgtaaatttgtttggacgaaac 240  Q
    ||||||||   || |||||||||||||||    
T  45621885 taagtaacacgaa-ttgtttggacgaaac 45621912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 23933380 - 23933506
Alignment:
Q  44 aacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgc 142  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||| |||| |||| ||||||||||||||||| ||| || ||||||| || |||||||||    
T  23933380 aacgcgacatgaatgttatttaattccagcaaatgaataggggg-attcaaagaatcctaaccgctgcttacttttgtgaaaccaaaccaagtaacttgc 23933478  T
Q  143 tatgttgcaaacagataaaaattgcaat 170  Q
    | ||||||||||||||||||||||||||    
T  23933479 tctgttgcaaacagataaaaattgcaat 23933506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 169
Target Start/End: Original strand, 27908918 - 27909079
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtta-ttaat-tccaacaa-atgattaggggggattcgaagagtcctaaccgct 108  Q
    |||||||||  ||||||||| ||  |||||| ||||| |||| | ||||| ||||| |||||||| || | ||||||||||||||||| |||||||||||    
T  27908918 tcatcacttgtatagtctacctaagataaataaacgcaacattattgttacttaatatccaacaatataaataggggggattcgaagaatcctaaccgct 27909017  T
Q  109 gcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||  |||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  27909018 gcttaattttctgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 27909079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 28925746 - 28925660
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  28925746 ggggattcgaagaatcctaacctctgcttacttttctgcaaccaaaacaggtaaacttgctatgttgcaaacaaataaaaattgcaa 28925660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 169
Target Start/End: Original strand, 29719032 - 29719193
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttattaa--ttccaacaaatgattaggggggattcgaagagtcctaaccgctg 109  Q
    |||||||||  ||||||||| ||  |||||| |||||||||| | ||||||| |  ||| ||||||| | ||| ||||||||||||| ||||||| ||||    
T  29719032 tcatcacttgtatagtctacctaagataaataaacgcgacattactgttatttaatttctaacaaataaatagaggggattcgaagaatcctaactgctg 29719131  T
Q  110 cttacatttctgcaaccaaa-acaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||| |||||||||||||| |||||| |||||||| ||||||| ||| |||||||||||||    
T  29719132 cttacttttctgcaaccaaacacaggtaaacttgctctgttgcatacatataaaaattgcaa 29719193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 193
Target Start/End: Original strand, 23011566 - 23011746
Alignment:
Q  13 catcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgct 111  Q
    ||||||||  ||| |||||||| || |||| ||||| ||||||||| |||| ||||||| ||||  |   ||||||||| |||||||| ||||||||| |    
T  23011566 catcacttgtataatctacttaaaaaaaataaacgcaacatgaatggtatttaattccagcaaaatagatggggggatttgaagagtcttaaccgctggt 23011665  T
Q  112 tacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttatt 193  Q
    ||| ||||| ||||||||  |||||||||| ||||||| ||| ||||||||||| ||||||||||| || || |||||||||    
T  23011666 tacttttctacaaccaaat-aggtaacttgatatgttggaaatagataaaaatttcaatatctaacccttaactcttttatt 23011746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 26603233 - 26603326
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatcta 175  Q
    |||||||||||||| ||||||||||||||||| ||||| ||||| |||||||||||  |||| ||||||||||||||||||||||||| |||||    
T  26603233 gggggattcgaagaatcctaaccgctgcttacttttctacaaccaaaaacaggtaaactgctctgttgcaaacagataaaaattgcaacatcta 26603326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 25618782 - 25618694
Alignment:
Q  82 ggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||||| | | ||||||||||||| |||||||||||||||||||| ||||| || |||||||||||||||||||||||||    
T  25618782 ggggggattcgaagaattcgaaccgctgcttacttttctgcaaccaaaacaggtaaactttctctgttgcaaacagataaaaattgcaa 25618694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 25530661 - 25530574
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaactt-gctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||||||||| |||||||||||||||||  || |||||||||||||||||| || ||| |||||||||||||||||||||||||    
T  25530661 gggggattcgaagaatcctaaccgctgcttactattttgcaaccaaaacaggtaaattcgctctgttgcaaacagataaaaattgcaa 25530574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 195
Target Start/End: Complemental strand, 29027794 - 29027609
Alignment:
Q  13 catcacttagatagtctacttagaataaatgaacgcgacatgaatgttattaatt--ccaaca-aatgattaggggggattcgaagagtcctaaccgctg 109  Q
    ||||||||  ||||||||||||  |||| | |||||||||||||||||||| |||  | |||| ||| | ||||| ||||||  | ||| ||||||| ||    
T  29027794 catcacttttatagtctacttaagataactaaacgcgacatgaatgttatttattatctaacacaataaatagggtggattcacatagttctaaccgttg 29027695  T
Q  110 cttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttattta 195  Q
     || | |||||||||||||| ||||| ||||||| | |||||||||||||||||||||||| |||||| || |  |||||||||||    
T  29027694 ttttcttttctgcaaccaaatcaggtcacttgctctcttgcaaacagataaaaattgcaatctctaacccttatctcttttattta 29027609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 30411893 - 30411805
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||||||| | ||||||||||||||||| ||||||||||| |||||| || |||||||| |||||||||||||||||||||||||    
T  30411893 gggggattcgaaaaatcctaaccgctgcttacttttctgcaaccaaaaacatgtaaacttgctctgttgcaaacagataaaaattgcaa 30411805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 25887774 - 25887864
Alignment:
Q  80 taggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaac-aggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||| ||||| || ||| ||||| |||| |||||||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  25887774 taggggggatttgaagaatcataatcgctggttacttttctgcaaccaaaaataggtaacttgctctgttgcaaacagataaaaattgcaa 25887864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 29143174 - 29143088
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaa-cttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| || ||||||||| |||| ||||| ||||||||| |||||| |||||| |||||||||||||||||||||||||    
T  29143174 ggggattcgaagaatcttaaccgctgtttacttttctacaaccaaaataggtaaacttgctctgttgcaaacagataaaaattgcaa 29143088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 17675500 - 17675589
Alignment:
Q  81 aggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaa-cttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||| ||||||| | | |||||||||| |||  |||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  17675500 agggggaattcgaaaaattctaaccgctgtttatttttctgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 17675589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 85 - 194
Target Start/End: Original strand, 20174512 - 20174620
Alignment:
Q  85 gggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaa 184  Q
    |||||||||||||| ||||||||||||||| |||||   |||||| ||||||| ||||| ||||||||||||||||||||| |||| |||||| || ||     
T  20174512 gggattcgaagagtgctaaccgctgcttacttttcttttaccaaa-caggtaatttgctctgttgcaaacagataaaaattccaatctctaacccttaac 20174610  T
Q  185 tcttttattt 194  Q
    | ||||||||    
T  20174611 tattttattt 20174620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 240
Target Start/End: Original strand, 21078428 - 21078657
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtta-ttaattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    |||||||||||||||||||||||  ||   |||||||||| ||| ||||| ||||||||||||| | | ||||||| |||| || | |||||||  || |    
T  21078428 tcatcacttagatagtctacttaagattgttgaacgcgacctgattgttaattaattccaacaactaaataggggg-attcaaataatcctaactactac 21078526  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgc-aatatc-taactctcaaatcttttattta-tattttgttcac 207  Q
      ||| || | ||||||||| ||||||||| || | ||||||| ||||||||||||| |||||| |||| || || ||||| ||||| || ||||||| |    
T  21078527 gaacaattatacaaccaaaataggtaactttctctattgcaaatagataaaaattgcaaatatcttaacccttaactctttaatttattaatttgttc-c 21078625  T
Q  208 caaataagtaacgtaaatttgtttggacgaaac 240  Q
    |||||||| |||||||| |||||||||||||||    
T  21078626 caaataagcaacgtaaa-ttgtttggacgaaac 21078657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 165
Target Start/End: Complemental strand, 25196229 - 25196153
Alignment:
Q  90 tcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaatt 165  Q
    ||||||| |||||||| |||||||| ||| |||||||||||||||| |||||||||||||||||||| |||||||||    
T  25196229 tcgaagaatcctaaccactgcttacttttttgcaaccaaaacaggtaaacttgctatgttgcaaacatataaaaatt 25196153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 17349573 - 17349486
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaa-cttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| | || |||||||||||| ||| ||||||||||| || |||| |||||| |||||||||||||||||||||||||    
T  17349573 ggggattcgaagaattctgaccgctgcttacttttttgcaaccaaaaacaagtaaacttgctctgttgcaaacagataaaaattgcaa 17349486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 25535487 - 25535400
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaactt-gctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||||||||| ||| ||||||||||||| ||| |||||||||||||||||| ||  |  ||||||||| |||||||||||||||    
T  25535487 gggggattcgaagaatcccaaccgctgcttacttttttgcaaccaaaacaggtaaattcacgctgttgcaaatagataaaaattgcaa 25535400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 194
Target Start/End: Original strand, 25885332 - 25885445
Alignment:
Q  80 taggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactc 179  Q
    ||||||| |||| ||||||||||||| |||||||| ||||| ||||| || |||||||| | || | || | ||||||||||||||| |||||||||| |    
T  25885332 tagggggaattcaaagagtcctaaccactgcttacttttctacaacc-aaccaggtaaccttctctattccgaacagataaaaattgaaatatctaaccc 25885430  T
Q  180 tcaaatcttttattt 194  Q
    | || ||||||||||    
T  25885431 ttaactcttttattt 25885445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 17635646 - 17635735
Alignment:
Q  81 aggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaa-cttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||| ||||||| | | ||||| |||| |||  | |||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  17635646 agggggaattcgaaaaattctaactgctgtttatttatctgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 17635735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 15339463 - 15339376
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaa-cttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||| ||||| ||||||| ||||||||| |||||||||| |||| ||| ||| |||||| ||||||||||| |||||||||||||    
T  15339463 ggggatttgaagaatcctaactgctgcttacttttctgcaacaaaaaacagataaacttgctctgttgcaaacaaataaaaattgcaa 15339376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 24090813 - 24090899
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaactt-gctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||  |||||||| |||||||| |||||||||||||||||||||| || ||  | ||||||| | |||||||||||||    
T  24090813 ggggattcgaagcatcctaaccactgcttacttttctgcaaccaaaacaggtaaattcgcagttttgcaaaaatataaaaattgcaa 24090899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 5777344 - 5777284
Alignment:
Q  179 ctcaaatcttttatttatattttgttcaccaaataagtaacgtaaatttgtttggacgaaac 240  Q
    ||||| |||||||| ||||||||||| |||||||||||||||| || |||||||||||||||    
T  5777344 ctcaactcttttatctatattttgttaaccaaataagtaacgtgaa-ttgtttggacgaaac 5777284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 17198081 - 17198035
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa 130  Q
    ||||||||||||| || |||||||||||||| |||||||||||||||    
T  17198081 ggggattcgaagaatcttaaccgctgcttacttttctgcaaccaaaa 17198035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 26667519 - 26667465
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggtaa 137  Q
    ||||||||||||| |||||||||||| |||| ||||||||||| |||||||||||    
T  26667519 ggggattcgaagaatcctaaccgctgtttacttttctgcaaccgaaaacaggtaa 26667465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 31804791 - 31804860
Alignment:
Q  102 aaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| ||||||||||| ||||||||| || ||||| | ||||||||| |||||||||||||    
T  31804791 aaccgctgcttacttttctgcaaccaaaaacaggtaaatttgctttattgcaaacaaataaaaattgcaa 31804860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 25920478 - 25920391
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaactt-gctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||| |||| || ||| | ||||| || ||||||||||||||| |||||||  | ||| |||||||||||||||||||||||||    
T  25920478 ggggattcaaagaatcataatcactgctcacttttctgcaaccaaaaacaggtaaaatcgctctgttgcaaacagataaaaattgcaa 25920391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 11382671 - 11382713
Alignment:
Q  127 aaaacaggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||| |||||||||| |||||||||||||||||| ||||||    
T  11382671 aaaacaagtaacttgctctgttgcaaacagataaaatttgcaa 11382713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 169
Target Start/End: Complemental strand, 13776580 - 13776476
Alignment:
Q  68 ccaacaaatgattaggggggattcgaagagtcct--aaccgctgcttacatttctgcaaccaaaa-caggtaa-cttgctatgttgcaaacagataaaaa 163  Q
    ||||||||| | |||||| |||||||||| ||||  ||||| || |||| |||||| ||| |||| ||||||| ||| || |||||||||||||||||||    
T  13776580 ccaacaaataaataggggcgattcgaagaatcctctaaccgttg-ttacttttctggaacaaaaaacaggtaatcttactctgttgcaaacagataaaaa 13776482  T
Q  164 ttgcaa 169  Q
    ||||||    
T  13776481 ttgcaa 13776476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 28606096 - 28606146
Alignment:
Q  127 aaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaac 177  Q
    ||||||||||||||| ||||| | ||||| |||||||||||||| ||||||    
T  28606096 aaaacaggtaacttgttatgtcgtaaacaaataaaaattgcaatctctaac 28606146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 17743365 - 17743438
Alignment:
Q  98 tcctaaccgctgcttacatttctgcaaccaaaa-caggtaa-cttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||||| |||| | ||||| ||||||||| ||||||| ||||||  |||||||| |||||||||||||||    
T  17743365 tcctaaccgcggcttccttttctacaaccaaaaacaggtaaacttgcttagttgcaaaaagataaaaattgcaa 17743438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 26291365 - 26291285
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtt-attaattccaacaaatgattaggggggattc 91  Q
    ||||||||||||||||||||||| || || |||||| ||| ||| |||| ||||||| ||| |||| | ||| ||||||||    
T  26291365 tcatcacttagatagtctacttaaaaaaattgaacgtgacttgactgttaattaatttcaataaattaatagaggggattc 26291285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 169
Target Start/End: Original strand, 26115708 - 26115865
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    |||| ||||||| |||||||||| ||||| |||||||||| ||| | ||||| ||||| ||||||||| ||||||| ||| ||||| |||||||||||||    
T  26115708 tcattacttagaaagtctacttaaaataattgaacgcgacttgactattatttaattcgaacaaatgaataggggg-atttgaagaatcctaaccgctgc 26115806  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    | |||||| ||||||||||||||||||||| || |||||||||||||||||||||||||    
T  26115807 taacatttatgcaaccaaaacaggtaacttactctgttgcaaacagataaaaattgcaa 26115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 15 - 175
Target Start/End: Original strand, 19374617 - 19374778
Alignment:
Q  15 tcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgctta 113  Q
    ||||||||||||||||||||| |||| | || | ||||||||||||||| ||||||||||||||| || ||| ||| | |||| ||||||||  ||||||    
T  19374617 tcacttagatagtctacttaggataactaaatgtgacatgaatgttatttaattccaacaaatgaataagggcgatacaaagaatcctaaccaatgctta 19374716  T
Q  114 catttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatcta 175  Q
    |||||||||||||||||||||||||||||| || |||||||| |||||| ||||||| ||||    
T  19374717 catttctgcaaccaaaacaggtaacttgctttgctgcaaacatataaaatttgcaatctcta 19374778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 12 - 240
Target Start/End: Original strand, 25121029 - 25121257
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    |||||||||||||||||||||||  ||||   |  | | ||||||||||||| |||  |||||||||| |||||| |||||||||| |||||||||||||    
T  25121029 tcatcacttagatagtctacttaagataacaaagtgtggcatgaatgttatttaatgtcaacaaatgaatagggg-gattcgaagaatcctaaccgctgc 25121127  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatat-ctaactctcaaatcttttatttatattttgttcacca 209  Q
    |||| ||||||||| |||||| ||||||||||| ||||||||||||||| |||||||||| |  || | ||||| |||||||||||| ||||    ||||    
T  25121128 ttacttttctgcaatcaaaacgggtaacttgctctgttgcaaacagatagaaattgcaatctattatcactcaactcttttatttatttttttaaaacca 25121227  T
Q  210 aataagtaacgtaaatttgtttggacgaaac 240  Q
    |||||||||||  || |||||||||||||||    
T  25121228 aataagtaacgcgaa-ttgtttggacgaaac 25121257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 240
Target Start/End: Original strand, 21323681 - 21323906
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtta-ttaattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    |||||| ||||||||| |||||||||||| ||||| |||| ||| ||||| ||||||||||||||||| ||||||  ||||||| | | ||||  | |||    
T  21323681 tcatcatttagatagtatacttagaataactgaacacgacttgactgttaattaattccaacaaatgaatagggg--attcgaaaaattctaat-gttgc 21323777  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatc-taactctcaaatcttttatttatattttgttcacca 209  Q
    ||| | ||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| || || | ||||| |||||||||  | | |||||||  |    
T  21323778 ttagaattctgcaaccaaaacaggtaacttgctctgttgcaaatagataaaaattgtaatctcttatccctcaactcttttattattttattgttca-aa 21323876  T
Q  210 aataagtaacgtaaatttgtttggacgaaac 240  Q
    |||||||||||  || |||||||||||||||    
T  21323877 aataagtaacgcgaa-ttgtttggacgaaac 21323906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 169
Target Start/End: Original strand, 11520996 - 11521153
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtta-ttaattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    |||||||||||||||| |||||||||||| |||| | ||| ||| ||||| |||||| |||||||||| ||| ||  |||| |||| |||||||| | ||    
T  11520996 tcatcacttagatagtttacttagaataattgaatgtgacttgattgttaattaatttcaacaaatgaatagaggatattcaaagaatcctaaccaccgc 11521095  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    | ||||| |||||| ||||||||| |||||||| |||||||||||| ||||||||||||    
T  11521096 taacatt-ctgcaatcaaaacaggcaacttgctttgttgcaaacaggtaaaaattgcaa 11521153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 44 - 194
Target Start/End: Complemental strand, 5679471 - 5679319
Alignment:
Q  44 aacgcgacatgaatgttatt-aattccaacaaa-tgattaggggggattcgaagagtcctaaccgctgcttacatttct-gcaaccaaaacaggtaactt 140  Q
    |||||||||||||||||||| |||||||||||| | | ||||| |||||| |||||||||||  ||||||||| ||| | |||||||||  |||||||||    
T  5679471 aacgcgacatgaatgttatttaattccaacaaaataaatagggaggattcaaagagtcctaatggctgcttactttttttgcaaccaaat-aggtaactt 5679373  T
Q  141 gctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttattt 194  Q
    ||| |||| ||||||||||||||||||||| |||||| || || ||||||||||    
T  5679372 gctctgttacaaacagataaaaattgcaatgtctaacccttaactcttttattt 5679319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 12 - 195
Target Start/End: Complemental strand, 19092593 - 19092408
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaa-tgattaggggggattcgaagagtcctaaccgctg 109  Q
    |||||||||  ||||||||||||   ||| | ||||| |||||||||||||| || ||||| ||| | | || ||||||| | ||||||||||||||||     
T  19092593 tcatcacttgtatagtctacttaagttaactaaacgcaacatgaatgttatttaaatccaataaaataaatatgggggatgcaaagagtcctaaccgcta 19092494  T
Q  110 cttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttattta 195  Q
     |||| |||||| ||||||||||||||| || || ||||| |||||||||||||||||||| ||||||||| |  |||||||||||    
T  19092493 tttacttttctgtaaccaaaacaggtaatttactctgttgtaaacagataaaaattgcaatctctaactcttatctcttttattta 19092408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 108
Target Start/End: Complemental strand, 30600134 - 30600037
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtt-attaattccaacaaatgattaggggggattcgaagagtcctaaccgct 108  Q
    |||||||||||||||| |||||||||||| |||||||||| |||||||| |||||||||||||||| | |||||| |||| |||||||| ||||||||    
T  30600134 tcatcacttagatagtatacttagaataactgaacgcgacttgaatgttaattaattccaacaaataaataggggagatttgaagagtcttaaccgct 30600037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 98 - 194
Target Start/End: Complemental strand, 17672212 - 17672116
Alignment:
Q  98 tcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttattt 194  Q
    ||||||| ||| ||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||  | || ||||||||||    
T  17672212 tcctaactgcttcttacttttctgcaaccaaaccaggtaacttgctctgttgcaaacagataaaaattgcaatctctaacctttaactcttttattt 17672116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 102 - 177
Target Start/End: Original strand, 17951189 - 17951264
Alignment:
Q  102 aaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaac 177  Q
    ||||||||||| | |||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||    
T  17951189 aaccgctgcttgcttttctgcaaccaaatcaggtaacttgctctgttgcaaacagataaaaattgcaatctctaac 17951264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 11700376 - 11700520
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtt-attaattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    ||||||||||||||||||||||||||||| ||| |||||| ||| |||| ||||||||||| |||||  ||| || ||||| |||| |||||||||| ||    
T  11700376 tcatcacttagatagtctacttagaataattgatcgcgacttgactgttaattaattccaagaaatgtatagaggagattcaaagaatcctaaccgccgc 11700475  T
Q  111 ttacatttctgcaaccaaaacagg-taacttgctatgttgcaaaca 155  Q
    | ||| |||||||| ||||| |||  |||||||| |||||||||||    
T  11700476 taaca-ttctgcaatcaaaataggcaaacttgctctgttgcaaaca 11700520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 13909080 - 13908992
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||| |||| ||||||||||||||||| ||| ||||||| ||||||||| |||||||| |||||||||||||||||||||||||    
T  13909080 gggggattcaaagaatcctaaccgctgcttacttttttgcaaccaaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 13908992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 17955044 - 17955116
Alignment:
Q  105 cgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaac 177  Q
    |||||||| | |||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||    
T  17955044 cgctgcttgcttttctgcaaccaaatcaggtaacttgctctgttgcaaacagataaaaattgcaatctctaac 17955116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 67 - 162
Target Start/End: Complemental strand, 12761485 - 12761390
Alignment:
Q  67 tccaacaaatgattaggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaa 162  Q
    |||| ||||||| ||| |||||||| |||| || ||||||||||| |||||  |||||||||||||||||||||||| ||||||||||| ||||||    
T  12761485 tccatcaaatgaatagaggggattcaaagaatcataaccgctgctaacattgttgcaaccaaaacaggtaacttgctttgttgcaaacaaataaaa 12761390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 169
Target Start/End: Original strand, 19492511 - 19492673
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtta-ttaat-tccaacaa-atgattaggggggattcgaagagtcctaaccgct 108  Q
    |||||||||  ||||||||| ||  |||||| |||||||||| | ||||| ||||| |||||||| || |  |||||||||||||||| ||||||||||     
T  19492511 tcatcacttgtatagtctacctaagataaataaacgcgacattactgttacttaatatccaacaatataaacaggggggattcgaagaatcctaaccgcc 19492610  T
Q  109 gcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||| ||||||||||| |||||| || |||||||| ||||||||||| ||||| |||||||    
T  19492611 gcttacttttctgcaaccaaaaacatgtaaacttgctgtgttgcaaacaaataaatattgcaa 19492673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 80 - 180
Target Start/End: Original strand, 22357402 - 22357503
Alignment:
Q  80 taggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgcaatatctaact 178  Q
    |||||||||||| || |||||||| || ||||| | ||||||||| ||||| || |||||||||||| ||||||||| |||||||||||||| |||||||    
T  22357402 taggggggattcaaaaagtcctaaacgatgcttccttttctgcaatcaaaaacaagtaacttgctatattgcaaacaaataaaaattgcaatctctaact 22357501  T
Q  179 ct 180  Q
    ||    
T  22357502 ct 22357503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 14649120 - 14649008
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctc 181  Q
    ||||||||| |||||||||||||| || || | ||||| ||||||||| || |||||||||| |||||||||||||||||||||| ||| |||||| ||     
T  14649120 gggggattcaaagagtcctaaccgttgtttccttttctacaaccaaaaacaagtaacttgctctgttgcaaacagataaaaattgaaatctctaaccctt 14649021  T
Q  182 aaatcttttattt 194  Q
    |  ||||||||||    
T  14649020 atgtcttttattt 14649008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 19562049 - 19562137
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaattgcaat 170  Q
    ||||||||||||| | |||||||||| |||| ||||||||||| ||||||||| |||||||| ||||||||| ||||||||||||||||    
T  19562049 ggggattcgaagaattctaaccgctgattacttttctgcaaccaaaaacaggtaaacttgctctgttgcaaagagataaaaattgcaat 19562137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 143
Target Start/End: Complemental strand, 23645063 - 23644939
Alignment:
Q  23 atagtctacttagaataaatgaacgcgacatgaatgtta-ttaat-tccaaca-aatgattaggggggattcgaagagtcctaaccgctgcttac-attt 118  Q
    ||||||||| |||||||||| |||||||||||| ||||| ||||| ||||||| ||| | ||||||  ||||||||| |||||| ||||||||||  |||    
T  23645063 atagtctacctagaataaataaacgcgacatgactgttatttaatatccaacataataaataggggaaattcgaagaatcctaaacgctgcttacttttt 23644964  T
Q  119 ctgcaaccaaaacaggtaacttgct 143  Q
     ||||||||||||||||||||||||    
T  23644963 ttgcaaccaaaacaggtaacttgct 23644939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 119 - 194
Target Start/End: Original strand, 12578176 - 12578251
Alignment:
Q  119 ctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttattt 194  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| ||  | ||||||||||    
T  12578176 ctgcaaccaaaacaggtaacttgctctgttgcaaacagataaaaattgtaatctctaaccctttactcttttattt 12578251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 169
Target Start/End: Original strand, 17336934 - 17337096
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aat-tccaacaa-atgattaggggggattcgaagagtcctaaccgct 108  Q
    |||||||||  ||||||||| ||  ||||||||||||||||| | ||||||| ||| |||| ||| || | || |||||||||||||| || ||| | ||    
T  17336934 tcatcacttgtatagtctacctaagataaatgaacgcgacattactgttatttaatatccatcaatataaataagggggattcgaagaatcataatctct 17337033  T
Q  109 gcttacatttctgcaaccaaaa-caggtaa-cttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||| ||| ||||||||||| ||||||| |||||| ||||| |||||||||||||||||||    
T  17337034 gcttacttttatgcaaccaaaaacaggtaaacttgctctgttgtaaacagataaaaattgcaa 17337096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 17709978 - 17709896
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaatt 165  Q
    ||||||||||||| ||||||| ||| ||||| ||| |||||||||||||||| |||||||| ||||||||||| |||||||||    
T  17709978 ggggattcgaagaatcctaacagctacttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacatataaaaatt 17709896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 17217030 - 17216958
Alignment:
Q  98 tcctaaccgctgcttacatttctgcaaccaaaacaggtaa-cttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||| ||||||| ||||| ||||||||||| |||| |||||| |||||||||||||||||||||||||    
T  17217030 tcctaaccgttgcttacttttctacaaccaaaacatgtaaacttgctctgttgcaaacagataaaaattgcaa 17216958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 15164991 - 15164904
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||||   |||||| |  ||||| |||||||||||||||||||| |||||||| ||||||||||| |||||||||||||    
T  15164991 gggggattcgaagaaaactaacctccacttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaacaaataaaaattgcaa 15164904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 17026218 - 17026305
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| ||||||||||||||||| | ||||||||| ||||||||| || || || ||||||||||||||||||| |||||    
T  17026218 ggggattcgaagaatcctaaccgctgcttacttgtctgcaaccaaaaacaggtaaatttactctgttgcaaacagataaaaactgcaa 17026305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 19929474 - 19929632
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttattaatt--ccaacaa-atgattaggggggattcgaagagtcctaaccgct 108  Q
    |||||||||  ||||||||||||  |||| | |||||||||||||||||||| |||  ||||| | || |  |||||| |||  |||||||||||| | |    
T  19929474 tcatcacttgtatagtctacttaagataactaaacgcgacatgaatgttatttattatccaacgatataagcagggggaatttaaagagtcctaactgtt 19929573  T
Q  109 gcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattg 166  Q
    | || | ||||||||||||||| || |||| ||||| ||||||||||||||||||||||    
T  19929574 gtttccttttctgcaaccaaaaacatgtaatttgctctgttgcaaacagataaaaattg 19929632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 9737312 - 9737431
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtta-ttaattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    |||||||||| ||| ||||||||||||||   |||||||| ||| ||||| ||||||||||||||||| ||| ||  |||| |||| |||||||||| ||    
T  9737312 tcatcacttaaatactctacttagaataacgaaacgcgacttgactgttaattaattccaacaaatgaatagaggacattcaaagaatcctaaccgccgc 9737411  T
Q  111 ttacatttctgcaaccaaaac 131  Q
    | ||| |||||||| ||||||    
T  9737412 taaca-ttctgcaatcaaaac 9737431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 166
Target Start/End: Original strand, 20829640 - 20829696
Alignment:
Q  111 ttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattg 166  Q
    |||||||||||||||||||| || |||||||||||||| ||||||||||||||||||    
T  20829640 ttacatttctgcaaccaaaaacaagtaacttgctatgtcgcaaacagataaaaattg 20829696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 169
Target Start/End: Original strand, 9264816 - 9264966
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtt-attaattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    |||||||||||||||||||||||||||||  ||||||||| ||| | || | |||||||||||||||| ||  | |||         ||||||| |||||    
T  9264816 tcatcacttagatagtctacttagaataacagaacgcgacttgactattaaataattccaacaaatgaatatagagga---------tcctaactgctgc 9264906  T
Q  111 ttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    | | |||| ||||| ||||||| || ||||| || |||||||||||||||||||||||||    
T  9264907 taatatttttgcaatcaaaacacgtaaactttctctgttgcaaacagataaaaattgcaa 9264966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 162
Target Start/End: Original strand, 24639336 - 24639415
Alignment:
Q  85 gggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaa 162  Q
    ||||||| |||| |||||||| |||||||| ||||||||||| ||||||||| |||||||| ||||||||||| ||||||    
T  24639336 gggattcaaagaatcctaaccactgcttacttttctgcaaccgaaaacaggtaaacttgctctgttgcaaacaaataaaa 24639415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 3775024 - 3774975
Alignment:
Q  113 acatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaa 162  Q
    |||||||||||||||||| |||||||||||| ||||||||| ||||||||    
T  3775024 acatttctgcaaccaaaaaaggtaacttgctctgttgcaaatagataaaa 3774975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 169
Target Start/End: Complemental strand, 25098044 - 25097959
Alignment:
Q  86 ggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||| ||||||||||||| ||| ||||  ||||| ||||||||| || ||||| |||||| ||||||||||||||||||    
T  25098044 ggattcgaagaatcctaaccgctgcatacttttcaacaaccaaaaacaggtaaatttgctttgttgccaacagataaaaattgcaa 25097959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 7582522 - 7582435
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||| |||| |||||||| |||||||  ||||||||||| ||||||||| |||||| | | |||||||||||| ||||||||||    
T  7582522 ggggattcaaagaatcctaaccactgcttatttttctgcaaccaaaaacaggtaaacttgttctattgcaaacagatgaaaattgcaa 7582435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 240
Target Start/End: Complemental strand, 19882938 - 19882708
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtta-------ttaattccaacaaatgattaggggggattcgaagagtcctaac 104  Q
    ||||||||||||||||||||||||||||| | || | ||| ||| |||||       |||||||||||||| || ||| | ||||||    | |||||||    
T  19882938 tcatcacttagatagtctacttagaataactaaatgtgacttgattgttattgttatttaattccaacaaaggaatagagaggattc----aatcctaac 19882843  T
Q  105 cgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgc-aatatc-taactctcaaatcttttattta-tatttt 201  Q
    | ||||| |||| ||||||||| ||||||||||  |||| || |||||||||||||||| ||| ||| || |||| ||||| |||||  |||| ||||||    
T  19882842 cactgctaacatatctgcaacc-aaacaggtaa-atgctctgctgcaaacagataaaaaatgcaaatctcttaaccctcaactctttattttattatttt 19882745  T
Q  202 gttcaccaaataagtaacgtaaatttgtttggacgaaac 240  Q
    |||  ||||||||||||||  || |||||||||||||||    
T  19882744 gtt-tccaaataagtaacgcgaa-ttgtttggacgaaac 19882708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 25094779 - 25094692
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaac-aggtaactt-gctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||| |||| |||||||||||||||   ||||| || ||||||| |||||| || ||| |||||||||||||||||||||||||    
T  25094779 ggggattctaagaatcctaaccgctgcttgattttctacatccaaaactaggtaaattcgctttgttgcaaacagataaaaattgcaa 25094692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 177
Target Start/End: Original strand, 8969603 - 8969696
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaac 177  Q
    |||||||||||||||||||||||  |||||||   | ||||| ||||| | |||||||||| ||||||| | ||||| |||||||||| ||||||    
T  8969603 gggggattcgaagagtcctaaccattgcttactaatttgcaa-caaaaaatgtaacttgctctgttgcatatagatataaattgcaatctctaac 8969696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 13692552 - 13692642
Alignment:
Q  81 aggggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||| ||||||||||| |||||||  |||||||| ||||||||||| ||||||||| |||||||| | || |||||  |||||||||||||    
T  13692552 agggcggattcgaagaatcctaactactgcttacttttctgcaaccaaaaacaggtaaacttgctcttttacaaactaataaaaattgcaa 13692642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 16730318 - 16730361
Alignment:
Q  127 aaaacaggtaa-cttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||| |||||| |||||||||||||||||||||||||    
T  16730318 aaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 16730361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 22173428 - 22173499
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaac 154  Q
    ||||||||  ||||||| |||| ||||||||| ||||||||||||||||| |||| ||| | | ||||||||    
T  22173428 gggggatttaaagagtcataactgctgcttacttttctgcaaccaaaacatgtaaattgttctcttgcaaac 22173499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 12406577 - 12406623
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa 130  Q
    ||||||||||||| |||||||||||| |||| || ||||||||||||    
T  12406577 ggggattcgaagaatcctaaccgctgtttactttcctgcaaccaaaa 12406623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 158
Target Start/End: Complemental strand, 19900823 - 19900727
Alignment:
Q  63 taattccaacaaatgattaggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaac--ttgctatgttgcaaacagat 158  Q
    |||||||||||||| | ||  |||||| |||||| |||||||| | ||| |||||  ||||| ||||||||||||   ||||||||||||||||||||    
T  19900823 taattccaacaaataaatataggggatccgaagaatcctaacctccgctaacatta-tgcaatcaaaacaggtaaactttgctatgttgcaaacagat 19900727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 11935282 - 11935237
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaa 129  Q
    ||||||||||||| |||||||| ||| |||| ||||||||||||||    
T  11935282 ggggattcgaagaatcctaaccactgattacttttctgcaaccaaa 11935237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 10107272 - 10107228
Alignment:
Q  61 attaattccaacaaatgattaggggggattcgaagagtcctaacc 105  Q
    |||||||||||||||||| ||| ||||||||||||| || |||||    
T  10107272 attaattccaacaaatgaatagaggggattcgaagaatcataacc 10107228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 194
Target Start/End: Complemental strand, 8241570 - 8241389
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaa-tgattaggggggattcgaagagtcctaaccgctg 109  Q
    |||||||||  || |||||||||  |||||| |||||||||||||||||||| |||||||||||| | | ||||||| |||| || |||| |||| ||||    
T  8241570 tcatcacttgtattgtctacttaagataaataaacgcgacatgaatgttatttaattccaacaaaataaataggggg-attcaaaaagtc-taactgctg 8241473  T
Q  110 cttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttattt 194  Q
    ||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||    
T  8241472 cttacttttctacaaccaaa-caggtaacttgctatgttgcaaacagataaaaattgcaatctctaactcttaactcttttattt 8241389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 196
Target Start/End: Original strand, 24252040 - 24252217
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||  | ||   ||||||||||||    ||||||  || |    
T  24252040 tcatcacttagatagtctacttagaataattaaacgcgacatgaatgttatttaattccaacag-tcata--gggggattcgaa----cctaaca-ctac 24252131  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttatttat 196  Q
    |||||||||||||||||||||| | |||||||| ||||||||||||||||||||| ||||||||||| ||||  ||||||||||||    
T  24252132 ttacatttctgcaaccaaaacacgaaacttgctctgttgcaaacagataaaaattacaatatctaaccctcatctcttttatttat 24252217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 170
Target Start/End: Original strand, 25927114 - 25927266
Alignment:
Q  19 ttagatagtctacttagaataaatgaacgcgacatgaatgttat-taattccaacaaatgattaggggggattcgaagagtcctaaccgctgcttacatt 117  Q
    ||||||| |||||||||||||| | |||||||| ||| || ||| ||||| |||||||||| |||| || |||| |||| ||||||||||| || |||||    
T  25927114 ttagatattctacttagaataactaaacgcgacttgattgatatataatttcaacaaatgaataggtggtattcaaagaatcctaaccgctactaacatt 25927213  T
Q  118 tctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaat 170  Q
    | || ||||||||||||||||||||| | ||||||||||||||||||||||||    
T  25927214 tatgaaaccaaaacaggtaacttgctctattgcaaacagataaaaattgcaat 25927266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 83 - 177
Target Start/End: Original strand, 12183204 - 12183298
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaac 177  Q
    |||||||||||||| ||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  12183204 gggggattcgaagaatcctaaccgttgcttacttttctgtaaccaaaacaggtaacttgctatgttgcaaacagataaacattgcaatctctaac 12183298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 12 - 169
Target Start/End: Complemental strand, 24215772 - 24215615
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    |||||||||| |||||| |||||  |||| ||||||| |||||||||||||| ||||| ||||||||| ||||||| |||| |||| ||||||| || ||    
T  24215772 tcatcacttaaatagtccacttaagataactgaacgcaacatgaatgttatttaattcaaacaaatgaataggggg-attcaaagaatcctaactgccgc 24215674  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    | |||||| ||||||||||| |||||||||| | |||| |||||| |||||||||||||    
T  24215673 taacatttttgcaaccaaaataggtaacttgttctgtttcaaacaaataaaaattgcaa 24215615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 67 - 220
Target Start/End: Original strand, 22566019 - 22566174
Alignment:
Q  67 tccaacaaatgattaggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaac-aggtaacttgctatgttgcaaacagataaaaatt 165  Q
    |||||||||||| ||| || ||||| || | ||||||||||||||||| ||||| ||| |||||  ||||||||||   |||||||||||||||||||||    
T  22566019 tccaacaaatgaatagaggagattcaaaaaatcctaaccgctgcttacttttctacaatcaaaaataggtaacttgtagtgttgcaaacagataaaaatt 22566118  T
Q  166 gcaatatctaa-ctctcaaatcttttatttatattttgttcaccaaataagtaacg 220  Q
    ||||| | | | ||||||| ||||| |||||||||||||| |||||||||||||||    
T  22566119 gcaatctattatctctcaactctttaatttatattttgttaaccaaataagtaacg 22566174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 23 - 193
Target Start/End: Complemental strand, 15466652 - 15466485
Alignment:
Q  23 atagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgcttacatttctg 121  Q
    ||||||||||||  |||| | |||| ||||| ||||||||| |||||||||||| |||   | |||||| ||||||| |||||||||| |||| ||||||    
T  15466652 atagtctacttaagataactaaacgtgacataaatgttatttaattccaacaaa-gata--gagggatttgaagagttctaaccgctgtttacttttctg 15466556  T
Q  122 caaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttatt 193  Q
    ||||||||  |||||||||||| |||||||||||||||||| ||||||| |||||| || || |||||||||    
T  15466555 caaccaaat-aggtaacttgctctgttgcaaacagataaaatttgcaatctctaacccttaactcttttatt 15466485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 23645644 - 23645752
Alignment:
Q  86 ggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaat 185  Q
    |||||| ||||  ||||||| |||||||| ||| ||||||||||||| |||||||||| ||||||||||| |||||||||||||| |||||| ||||| |    
T  23645644 ggattcaaagaagcctaaccactgcttacttttatgcaaccaaaacatgtaacttgctctgttgcaaacaaataaaaattgcaatctctaaccctcaact 23645743  T
Q  186 cttttattt 194  Q
    |||||||||    
T  23645744 cttttattt 23645752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 194
Target Start/End: Original strand, 28933459 - 28933645
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aat-tccaacaaatga--ttaggggggattcgaagagtcctaaccgc 107  Q
    |||||||||  ||||||||||||  |||| | || | ||||||||||||||| ||| |||||||||| |  | ||||||||||| |||||||||||||||    
T  28933459 tcatcacttgtatagtctacttaatataactaaatgtgacatgaatgttatttaatatccaacaaattaaataaggggggattcaaagagtcctaaccgc 28933558  T
Q  108 tgcttacatttctgcaaccaa-aacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttattt 194  Q
    || || | ||| ||||||||| |||| |||||||||| |||||||||||||||||||||||||| |||||| || |  ||||||||||    
T  28933559 tgtttcctttt-tgcaaccaagaacaagtaacttgctctgttgcaaacagataaaaattgcaatctctaacccttatctcttttattt 28933645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 194
Target Start/End: Complemental strand, 4340032 - 4339849
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aat-tccaacaaatgattaggggggattcgaagagtcctaaccgctg 109  Q
    |||||||||| |||||||| |||  |||||| || | ||||||| ||||||| ||| |||||||||| | ||||| ||||| |||||  ||| |||||||    
T  4340032 tcatcacttatatagtctatttaagataaataaatgtgacatgactgttatttaatatccaacaaataaatagggaggatt-gaagaaccctgaccgctg 4339934  T
Q  110 cttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttattt 194  Q
     |||| ||||||||||||||||||||||||||||  |||||||||| ||||| |||| ||| |||||| || |  ||||||||||    
T  4339933 gttacttttctgcaaccaaaacaggtaacttgcttagttgcaaacaaataaatattgtaatctctaacccttatctcttttattt 4339849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 86 - 169
Target Start/End: Original strand, 27737565 - 27737649
Alignment:
Q  86 ggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||| ||||||||||||||||| ||| |||||| ||||||||| |||||||| |||||||||||||||||||||||||    
T  27737565 ggattcgaagaatcctaaccgctgcttacttttttgcaacaaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 27737649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 1635261 - 1635110
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aat-tccaaca-aatgattaggggggattcgaagagtcctaaccgct 108  Q
    |||||||||  ||||||||| || |||| || ||| |||||||| || |||| ||| ||||||| ||| ||||| || |||||||||| |||||||||||    
T  1635261 tcatcacttttatagtctacctaaaatagataaacacgacatgactgctatttaatatccaacataatcattagcggagattcgaagaatcctaaccgct 1635162  T
Q  109 gcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataa 160  Q
    | |||| ||||| ||||||||||| |||||||||| ||||||||||||||||    
T  1635161 gtttacttttctacaaccaaaacatgtaacttgctttgttgcaaacagataa 1635110  T

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Target: chr6; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 9838581 - 9838470
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctca 182  Q
    |||||||| ||||| ||||||||  ||||||| |||||||||||||||| ||||||||||| | ||||||||||||||||||| |||| |||||| ||      
T  9838581 gggggatttgaagaatcctaaccattgcttacttttctgcaaccaaaacgggtaacttgctcttttgcaaacagataaaaattacaatctctaacgcttc 9838482  T
Q  183 aatcttttattt 194  Q
    | ||||||||||    
T  9838481 actcttttattt 9838470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 24657343 - 24657425
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaactt-gctatgttgcaaacagataaaaatt 165  Q
    ||||||||||||| | ||||||||||||||| |||||||||||||||||||||| || ||| |||||||||||||||||||||    
T  24657343 ggggattcgaagaattctaaccgctgcttacttttctgcaaccaaaacaggtaaattcgctctgttgcaaacagataaaaatt 24657425  T

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Target: chr6; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 9898774 - 9898921
Alignment:
Q  23 atagtctacttagaataaatgaacgcgacatgaatgtta-ttaattccaac-aaatgattaggggggattcgaagagtcctaaccgctgcttacatttct 120  Q
    ||||||||||||  |||| | |||||||||||||||||| |||| |||||| |||| |  |||||| ||||||| |||  ||||||||| |||| |||||    
T  9898774 atagtctacttaagataactaaacgcgacatgaatgttatttaactccaacaaaataaacagggggaattcgaacagttgtaaccgctg-ttacttttct 9898872  T
Q  121 gcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaat 170  Q
    |||||||||| |||||||||| | | ||||||||||||||||||||||||    
T  9898873 gcaaccaaaataggtaacttgttct-ttgcaaacagataaaaattgcaat 9898921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 25782002 - 25781916
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaa-cttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| |||||||  ||| |||| ||||||||||||||| |||||| |||||| |||||||||||||||||||||||||    
T  25782002 ggggattcgaagaatcctaactactgtttacttttctgcaaccaaaataggtaaacttgctctgttgcaaacagataaaaattgcaa 25781916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 85 - 169
Target Start/End: Original strand, 23844340 - 23844425
Alignment:
Q  85 gggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||||| | ||||||||||||||||| ||| |||||||||||||||| |||||| | | |||||||||||||||||||||||    
T  23844340 gggattcgaaaaatcctaaccgctgcttacttttatgcaaccaaaacaggtaaacttggtctattgcaaacagataaaaattgcaa 23844425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 169
Target Start/End: Complemental strand, 24475283 - 24475194
Alignment:
Q  81 aggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||| |||||||||| |||||||| || ||||| |||||||||||||||||||| |||||| | ||||||||||||||||| |||||||    
T  24475283 aggggagattcgaagaatcctaaccactacttacttttctgcaaccaaaacaggtaaacttgttttgttgcaaacagataaagattgcaa 24475194  T

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Target: chr6; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 67 - 169
Target Start/End: Complemental strand, 5624883 - 5624779
Alignment:
Q  67 tccaacaa-atgattaggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaat 164  Q
    |||||||| ||||||| ||| |||||||||| ||||||||||||||||| ||||||||||||||| | |||||  |||| | || |||||||||||||||    
T  5624883 tccaacaatatgattatgggagattcgaagaatcctaaccgctgcttacttttctgcaaccaaaagccggtaaactgctctattacaaacagataaaaat 5624784  T
Q  165 tgcaa 169  Q
    |||||    
T  5624783 tgcaa 5624779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 194
Target Start/End: Original strand, 6630492 - 6630677
Alignment:
Q  13 catcacttagatagtctacttagaataaatgaacgcgacatgaatgttattaatt--ccaacaa-atgattaggggggattcgaagagtcctaaccgctg 109  Q
    ||||||||  ||||||||||||  ||||   |||||||||||||||||||| |||  ||||||| || | ||||||  |||| ||||||||||||||||     
T  6630492 catcacttgtatagtctacttaagataacaaaacgcgacatgaatgttatttattatccaacaatataaataggggt-attcaaagagtcctaaccgcta 6630590  T
Q  110 cttacatttctgcaacc-aaaacaggtaacttgctatgttgc-aaacagataaaaattgcaatatctaactctcaaatcttttattt 194  Q
     || ||||| ||||||| ||||||||||||||||| |||||| ||| | |||||||||||||| ||||||  | | |||||||||||    
T  6630591 tttccatttttgcaaccaaaaacaggtaacttgctctgttgcaaaaaaaataaaaattgcaatctctaacctttatatcttttattt 6630677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 169
Target Start/End: Original strand, 21672235 - 21672394
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aat-tccaacaaatgattaggggggattcgaagagtcctaaccgctg 109  Q
    |||||||||| ||||||||| ||  |||||| ||| |||||| | | ||||| ||| ||||| |||| | |||||||||||  || | ||||||||||      
T  21672235 tcatcacttatatagtctacctaagataaataaacacgacattacttttatttaatatccaaaaaataaataggggggattgaaatattcctaaccgcca 21672334  T
Q  110 cttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||| ||| |||||| |||||||||||||||||  |||||||| |||||||||||||||    
T  21672335 cttacttttatgcaacgaaaacaggtaacttgctcagttgcaaatagataaaaattgcaa 21672394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 169
Target Start/End: Original strand, 21679651 - 21679810
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aat-tccaacaaatgattaggggggattcgaagagtcctaaccgctg 109  Q
    |||||||||| ||||||||| ||  |||||| ||| |||||| | | ||||| ||| ||||| |||| | |||||||||||  || | ||||||||||      
T  21679651 tcatcacttatatagtctacctaagataaataaacacgacattacttttatttaatatccaaaaaataaataggggggattgaaatattcctaaccgcca 21679750  T
Q  110 cttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||| ||| |||||| |||||||||||||||||  |||||||| |||||||||||||||    
T  21679751 cttacttttatgcaacgaaaacaggtaacttgctcagttgcaaatagataaaaattgcaa 21679810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 166
Target Start/End: Original strand, 27124369 - 27124452
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattg 166  Q
    |||||||| |||| || |||||||||||||| ||||||||||||| |||||| |||||||| ||||||||||| ||||||||||    
T  27124369 ggggattcaaagaatcttaaccgctgcttacttttctgcaaccaagacaggtaaacttgctctgttgcaaacatataaaaattg 27124452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 22813612 - 22813680
Alignment:
Q  101 taaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgca 168  Q
    |||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||||||||    
T  22813612 taaccgctacttacttttctgcaaccaaaacaggtaaacttgctttgttgcaaacaaataaaaattgca 22813680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 11177175 - 11177064
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctca 182  Q
    |||||||  ||||||||||||||||| || | ||| || ||| |||| ||||||||||||||||||||||||  |||||||||||||| |||||| || |    
T  11177175 ggggatttaaagagtcctaaccgctgtttccttttatgtaacaaaaaacaggtaacttgctatgttgcaaacttataaaaattgcaatttctaaccctta 11177076  T
Q  183 aatcttttattt 194  Q
      ||||||||||    
T  11177075 tctcttttattt 11177064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 20005792 - 20005879
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| || |||||||||| ||| ||||||||||| ||||||||| |||| ||| ||||||||||| |||||||||||||    
T  20005792 ggggattcgaagaatcttaaccgctgcatacctttctgcaaccaaaaacaggtaaactcgctctgttgcaaacaaataaaaattgcaa 20005879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 14079282 - 14079419
Alignment:
Q  37 ataaatgaacgcgacatgaatgttatt-aat-tccaacaa-atgattaggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaac-a 132  Q
    |||||| ||| |||||||| ||||||| ||| |||||||| || | ||||||| ||||||||| | ||||||||||||||| |||||| ||||||||  |    
T  14079282 ataaataaacacgacatgactgttatttaatatccaacaatataaatagggggaattcgaagaattctaaccgctgcttacttttctgtaaccaaaaata 14079381  T
Q  133 ggtaa-cttgctatgttgcaaacagataaaaattgcaa 169  Q
    || || ||| || |||||||||||||||||||||||||    
T  14079382 ggaaaacttcctttgttgcaaacagataaaaattgcaa 14079419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 17382275 - 17382214
Alignment:
Q  102 aaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaa 162  Q
    ||||||||||||| ||||||||||||||||| || |||||||| ||||||||||||||||||    
T  17382275 aaccgctgcttacttttctgcaaccaaaacatgtaaacttgctctgttgcaaacagataaaa 17382214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 194
Target Start/End: Complemental strand, 19244800 - 19244687
Alignment:
Q  82 ggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagat-aaaaattgcaatatctaactct 180  Q
    ||||| |||| |||| |||| ||| || ||||| ||||| |||||||| ||||||||||||| |||||||||||| | ||||| |||||| |||||| ||    
T  19244800 gggggcattcaaagaatccttaccactacttacttttctacaaccaaaccaggtaacttgctctgttgcaaacagttcaaaaagtgcaatctctaaccct 19244701  T
Q  181 caaatcttttattt 194  Q
    ||  ||||||||||    
T  19244700 catctcttttattt 19244687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 165
Target Start/End: Complemental strand, 21907733 - 21907577
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aat-tccaacaaa-tgattaggggggattcgaagagtcctaaccgct 108  Q
    |||||||||  ||||||||||||  |||| | ||| |||||||||||||||| ||| ||||||||| | | || |||| |||| ||||||| ||||||||    
T  21907733 tcatcacttgtatagtctacttaagataactaaacacgacatgaatgttatttaatatccaacaaagtaaataagggg-attcaaagagtcgtaaccgct 21907635  T
Q  109 gcttacatttctgcaaccaaaac-aggtaacttgctatgttgcaaacagataaaaatt 165  Q
    | || | ||| |||||||||||  || ||||||||| |||||||||||||||||||||    
T  21907634 gtttccttttttgcaaccaaaaatagctaacttgctctgttgcaaacagataaaaatt 21907577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 11136122 - 11136034
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttct-gcaaccaaaa-caggtaactt-gctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| ||||||||||| ||||| ||| | |||||||||| ||||||| || ||| |||||||||||||||||||||||||    
T  11136122 ggggattcgaagaatcctaaccgcttcttactttttttgcaaccaaaaacaggtaagttcgctctgttgcaaacagataaaaattgcaa 11136034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 165
Target Start/End: Complemental strand, 2586963 - 2586861
Alignment:
Q  62 ttaattccaacaaatgattaggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaa 161  Q
    ||||||||||||||||  ||||||| |||| |||| |||||||||||| | ||||||||||||| || ||| |||||||| | ||||| ||| |||| ||    
T  2586963 ttaattccaacaaatgtataggggg-attcaaagaatcctaaccgctggtaacatttctgcaactaagacatgtaacttgttgtgttgaaaatagattaa 2586865  T
Q  162 aatt 165  Q
    ||||    
T  2586864 aatt 2586861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 21841574 - 21841660
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttct-gcaaccaaaacaggtaa-cttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| |||||||| || ||| ||||||| |||||||||||| |||| |||||| |||||||| ||||||||||||||||    
T  21841574 ggggattcgaagaatcctaaccactactt-catttcttgcaaccaaaacaagtaaacttgctttgttgcaatcagataaaaattgcaa 21841660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 9726319 - 9726194
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtt-attaattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    ||||||||||||||||||||||||||||| |||||  ||  |   |||| |||||||||||||||| | ||| ||| |||| |||| ||||||||||  |    
T  9726319 tcatcacttagatagtctacttagaataattgaacttgaattttctgttaattaattccaacaaataaatagagggaattcaaagaatcctaaccgccac 9726220  T
Q  111 ttacatttctgcaaccaaaacaggtaa 137  Q
    | ||| |||||||| ||||||||||||    
T  9726219 taaca-ttctgcaatcaaaacaggtaa 9726194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 17826986 - 17827056
Alignment:
Q  100 ctaaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||| ||||||| ||||||||||||||| || ||||  |||||||||||||||| |||||||||||||    
T  17826986 ctaaccgttgcttacttttctgcaaccaaaaacaagtaaactgctatgttgcaaacatataaaaattgcaa 17827056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 169
Target Start/End: Original strand, 22412940 - 22413022
Alignment:
Q  88 attcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaactt-gctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||| ||||||||||| ||||| || ||| ||||||||||||||| || ||| |||| ||||||||||||| ||||||    
T  22412940 attcgaagaatcctaaccgctacttactttcctgtaaccaaaacaggtaaattcgctctgttacaaacagataaaagttgcaa 22413022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 23009282 - 23009368
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||||||||||||||| ||||| ||||   ||| |||||||||||||| || ||||| ||||||||||| ||||||| |||||    
T  23009282 ggggattcgaagagtcctaatcgctgtttactcgtcttcaaccaaaacaggtaaatttgctctgttgcaaacaaataaaaactgcaa 23009368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 23779082 - 23778996
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||||||||||||||| ||||| ||||   ||| |||||||||||||| || ||||| ||||||||||| ||||||| |||||    
T  23779082 ggggattcgaagagtcctaatcgctgtttactcgtcttcaaccaaaacaggtaaatttgctctgttgcaaacaaataaaaactgcaa 23778996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 8039025 - 8039120
Alignment:
Q  98 tcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttatt 193  Q
    |||||||| || ||||| ||||| ||||||||| |||||||| | |   ||||||||| |||||||||||||| |||||| || || |||||||||    
T  8039025 tcctaaccactacttacttttctacaaccaaaataggtaactcgttcgattgcaaacatataaaaattgcaatctctaacccttaactcttttatt 8039120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 22568064 - 22567985
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaa 162  Q
    |||| |||| ||||||| | |||| ||||||| ||||||||||||||  ||||||||  || ||||||||||||||||||    
T  22568064 ggggtattcaaagagtcattaccgttgcttacttttctgcaaccaaactaggtaactgactctgttgcaaacagataaaa 22567985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 23231859 - 23231938
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaa 162  Q
    ||||||||||||| |||||| || ||||||| |||||  |||||||||| || || ||||| ||||||||||||||||||    
T  23231859 ggggattcgaagaatcctaaacgttgcttacttttctataaccaaaacaagtaaatttgctctgttgcaaacagataaaa 23231938  T

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Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 14637094 - 14637012
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaa 163  Q
    |||||||||||||| |||||  |||||||||| ||||||||||| ||||||||| |||||||| ||||| ||  |||||||||    
T  14637094 gggggattcgaagaatcctattcgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgttgtaataagataaaaa 14637012  T

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Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 17883715 - 17883786
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaa 153  Q
    |||||||| ||||| || ||| |||||||||| ||||| ||||||||| ||||||| |||||||||| ||||    
T  17883715 gggggatttgaagaatcataaacgctgcttacttttctccaaccaaaaacaggtaaattgctatgttacaaa 17883786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 9386311 - 9386243
Alignment:
Q  61 attaattccaacaaatgattaggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa 130  Q
    |||||||||||||||||  ||| ||| ||||||||| |||||||||| ||| ||| |||||||| |||||    
T  9386311 attaattccaacaaatggatagagggaattcgaagaatcctaaccgccgctaaca-ttctgcaatcaaaa 9386243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 9516988 - 9516931
Alignment:
Q  106 gctgcttacatttctgcaaccaaaacaggtaa-cttgctatgttgcaaacagataaaa 162  Q
    ||||||||  ||||||||| ||||| |||||| ||||||||||||| |||||||||||    
T  9516988 gctgcttaattttctgcaatcaaaataggtaaacttgctatgttgctaacagataaaa 9516931  T

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Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 18075289 - 18075334
Alignment:
Q  88 attcgaagagtcctaaccgctgcttacatttctgcaaccaaaacag 133  Q
    |||| |||| || |||||||||||||| ||||||||||||||||||    
T  18075289 attcaaagaatcttaaccgctgcttacttttctgcaaccaaaacag 18075334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 22410256 - 22410289
Alignment:
Q  136 aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||| |||||||||||||||||||||||||    
T  22410256 aacttgctctgttgcaaacagataaaaattgcaa 22410289  T

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Target: chr3 (Bit Score: 81; Significance: 3e-38; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 194
Target Start/End: Original strand, 12805694 - 12805875
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    |||||||||| ||||||||||||  |||||| |||||||||||||||||||| ||| ||||||||  ||     |||||||||||| |||||||| ||||    
T  12805694 tcatcacttatatagtctacttaatataaataaacgcgacatgaatgttatttaatgccaacaaa--atagatagggattcgaagaatcctaacccctgc 12805791  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttattt 194  Q
    |||| |||||||||||||| ||||||| || || |||||||||||||||||||||||||| |||||| ||  ||||||||||||    
T  12805792 ttacttttctgcaaccaaatcaggtaattttctctgttgcaaacagataaaaattgcaatctctaaccctttaatcttttattt 12805875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 194
Target Start/End: Original strand, 21303155 - 21303339
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aat-tccaacaaatgattaggggggattcgaagagtcctaaccgctg 109  Q
    |||||||||| ||||||||||||   ||||| ||| |||||| | || |||| ||| |||||||||| | |||||||||||| || | ||||||||||||    
T  21303155 tcatcacttatatagtctacttaaggtaaataaacacgacattactgctatttaatatccaacaaataaataggggggattcaaataatcctaaccgctg 21303254  T
Q  110 cttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttattt 194  Q
    ||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||| ||  | ||||||||||    
T  21303255 cttacttttctgcaaccaaaacaagtaacttgctctgttgcaaacagataaaaattgcaatctctaaccctttactcttttattt 21303339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 220
Target Start/End: Original strand, 21825671 - 21825881
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    |||||||||||||||||||||||  |||| | || ||  ||||||||||||| ||||||||||||    |||||||||||| ||||||||||||   | |    
T  21825671 tcatcacttagatagtctacttacgataactaaatgcagcatgaatgttatttaattccaacaaaaacataggggggattcaaagagtcctaactcttac 21825770  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatc-taactctcaaatcttttatttatattttgtt-cacc 208  Q
    |||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| || || |  |||| || |||||||||||||||||  |||    
T  21825771 ttacttttctgcaaccaaaaaaggtaacttgctatgttacaaacagataaaaattgcaatctcttatccatcaactc-tttatttatattttgttaaacc 21825869  T
Q  209 aaataagtaacg 220  Q
    ||||||||||||    
T  21825870 aaataagtaacg 21825881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 8143910 - 8143767
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtta-ttaattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    |||||||||| ||||||||||||  |||||| ||||| ||||||| |||| ||||||||||||||| | |||||||||||| |||| ||||||||| |||    
T  8143910 tcatcacttatatagtctacttaagataaataaacgcaacatgaacgttacttaattccaacaaataaataggggggattccaagaatcctaaccgttgc 8143811  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaaca 155  Q
    |||| |||||||||||||||||||||||||| | |||||||||||    
T  8143810 ttac-tttctgcaaccaaaacaggtaacttgttctgttgcaaaca 8143767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 23 - 193
Target Start/End: Complemental strand, 10745186 - 10745015
Alignment:
Q  23 atagtctacttagaataaatgaacgcgacatgaatgtta-ttaattccaacaaatgattaggggggattcgaagagtcctaaccgctgcttacatttctg 121  Q
    |||| ||||||||||||| |||||||||| ||| ||||| ||| ||||||||||| | ||||||| ||||||| | |  |||| | ||||||||||||||    
T  10745186 atagcctacttagaataactgaacgcgacgtgactgttaattagttccaacaaattaataggggg-attcgaaaatttttaactgttgcttacatttctg 10745088  T
Q  122 caaccaaaacaggtaacttgctatgttgcaaacagataaaaattgc-aatatctaactctcaaatcttttatt 193  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||| ||| ||| || ||||| |||||||||    
T  10745087 caaccaaaacaggtaacttgctctgttgcaaatagataaaaattgcaaatctcttaccctcaactcttttatt 10745015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 12 - 177
Target Start/End: Complemental strand, 17156088 - 17155923
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    |||||||||  ||||||||||||  || | | |||| ||||||||||||||| ||||||||||||  | ||  |||||||| || |||||||| |||| |    
T  17156088 tcatcacttgtatagtctacttaagattactaaacgtgacatgaatgttatttaattccaacaaaataatataggggattcaaatagtcctaatcgctac 17155989  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaac 177  Q
    |||| ||||||||||||||  |||||||||||| |||||||||||||||||||||||||| ||||||    
T  17155988 ttacttttctgcaaccaaat-aggtaacttgctctgttgcaaacagataaaaattgcaatttctaac 17155923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 194
Target Start/End: Complemental strand, 8446117 - 8445935
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    ||||| |||||||| ||||||||  |||| | |||  ||||||||||||||| || || || |||||| ||||||| |||| |||| |||||||| ||||    
T  8446117 tcatcccttagataatctacttaacataactaaacatgacatgaatgttatttaactcaaagaaatgaataggggg-attcaaagaatcctaaccactgc 8446019  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttattt 194  Q
    ||||||||||||||||||   |||||||||| | |||||||||| ||||||||||||||| |||||| |  || ||||||||||    
T  8446018 ttacatttctgcaaccaatggaggtaacttgttctgttgcaaactgataaaaattgcaatctctaaccccaaactcttttattt 8445935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 240
Target Start/End: Original strand, 31285817 - 31286047
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtta-ttaattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    |||||||||  ||||||||||||  |||||| |||| ||||||||||||| ||||||||||||||  | ||| ||||||||||| | || |||| |||||    
T  31285817 tcatcacttgtatagtctacttaagataaataaacgtgacatgaatgttatttaattccaacaaagaaatagtggggattcgaataatcttaactgctgc 31285916  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaat-atctaactctcaaatcttttatttatattttgtt-cacc 208  Q
    |||| |||    |||||||| |||||||||||| | ||| ||||| ||||||||||||||  | || | ||| | ||||||||||  ||||||||  |||    
T  31285917 ttactttttgaaaaccaaaataggtaacttgctctattgaaaacatataaaaattgcaatcttttatccctcgattcttttattttaattttgttaaacc 31286016  T
Q  209 aaataagtaacgtaaatttgtttggacgaaac 240  Q
    |||||||||||| ||| |||||||||||||||    
T  31286017 aaataagtaacggaaa-ttgtttggacgaaac 31286047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 12 - 169
Target Start/End: Original strand, 17438230 - 17438391
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aat-tccaacaa-atgattaggggggattcgaagagtcctaaccgct 108  Q
    |||||||||  ||||||||| ||  |||||| ||||||||||||  |||||| ||| || ||||| || | ||| ||||||||||||| ||||||||| |    
T  17438230 tcatcacttgcatagtctacctaagataaataaacgcgacatgaccgttatttaatatcgaacaatataaatagaggggattcgaagaatcctaaccgtt 17438329  T
Q  109 gcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||| |||||||||||||||||||| || ||||| |||||||||||||||||||||||||    
T  17438330 gcttacttttctgcaaccaaaacaggtaaaattgctctgttgcaaacagataaaaattgcaa 17438391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 169
Target Start/End: Original strand, 2167418 - 2167577
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtta-ttaat-tccaacaa-atgattaggggggattcgaagagtcctaaccgct 108  Q
    |||||||||  || |||||| || |||||||||||| ||||| | ||||| ||||| |||||||| || | || |||||||||||||| |||||||| ||    
T  2167418 tcatcacttgtatggtctacctaaaataaatgaacgagacattactgttatttaatatccaacaatataaata-gggggattcgaagaatcctaaccact 2167516  T
Q  109 gcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
     ||||| ||||  |||||||||||||||||||| |||||||||||||||||||||||||||    
T  2167517 tcttacttttccacaaccaaaacaggtaacttggtatgttgcaaacagataaaaattgcaa 2167577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 194
Target Start/End: Complemental strand, 21325626 - 21325454
Alignment:
Q  23 atagtctacttagaataaatgaacgcgacatgaatgttatt-aat-tccaacaaatgattaggggggattcgaagagtcctaaccgctgcttacatttct 120  Q
    |||||| |||||  |||||| || ||||||||| ||||||| ||| |||||||||| | ||||||  || |||||| || |||||||| ||||| |||||    
T  21325626 atagtcaacttaagataaataaaagcgacatgactgttatttaatatccaacaaataaatagggg--atgcgaagaatcataaccgctacttacttttct 21325529  T
Q  121 gcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactc-tcaaatcttttattt 194  Q
    |||||||||  |||||||||||| ||||||||| |||||||||||||||| |||||| | |||| ||||||||||    
T  21325528 gcaaccaaattaggtaacttgctctgttgcaaatagataaaaattgcaatctctaacccttcaactcttttattt 21325454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 4650450 - 4650364
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| ||||||||| ||||||| |||||||||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  4650450 ggggattcgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaacttgctccgttgcaaacagataaaaattgcaa 4650364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 8770232 - 8770146
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| ||||||| ||||||||| |||||||||||||||||||| |||||||| ||||||||||| |||||||||||||    
T  8770232 ggggattcgaagaatcctaactgctgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaacatataaaaattgcaa 8770146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 165
Target Start/End: Original strand, 18736475 - 18736628
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    ||||||| |||||||||||||||  |||| | || ||||||||||| ||||| ||||||||||||| | | ||||  |||  |||| |||||||||||||    
T  18736475 tcatcacgtagatagtctacttaagataactaaatgcgacatgaatattatttaattccaacaaataaat-ggggtaatttaaagaatcctaaccgctgc 18736573  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaatt 165  Q
    |||  |||||||||||||||||||||||||| |  |||||||||| |||||||||    
T  18736574 ttatttttctgcaaccaaaacaggtaacttgttcggttgcaaacaaataaaaatt 18736628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 16245603 - 16245716
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgc-aatatctaactct 180  Q
    |||||||||| ||| | ||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||| |||||| ||    
T  16245603 gggggattcggagaattctaaccgctgcttacttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaaatctctaaccct 16245702  T
Q  181 caaatcttttattt 194  Q
     || ||||||||||    
T  16245703 taactcttttattt 16245716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 41508592 - 41508480
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgc-aatatctaactctc 181  Q
    ||||||||| |||| || ||||||||| |||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||| ||| |||||| ||     
T  41508592 gggggattcaaagaatcttaaccgctggttacttttctgcaaccaaaacatgtaacttgctttgttgcaaacagatacaaattgcaaatctctaaccctt 41508493  T
Q  182 aaatcttttattt 194  Q
    || ||||||||||    
T  41508492 aactcttttattt 41508480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 47 - 194
Target Start/End: Original strand, 2723673 - 2723820
Alignment:
Q  47 gcgacatgaatgttatt-aattccaacaaa-tgattaggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgcta 144  Q
    ||||||||||||||||| |||||||||||| | | ||| ||  |||| || |||| |||||||||||||| ||| |||||||||| |||||||||||||     
T  2723673 gcgacatgaatgttatttaattccaacaaaataaatagagg--attcaaatagtcttaaccgctgcttacttttttgcaaccaaa-caggtaacttgctt 2723769  T
Q  145 tgttgcaaacagataaaaa-ttgcaatatctaactctcaaatcttttattt 194  Q
    ||||||||||||||||||| |||||||||||||| || || || |||||||    
T  2723770 tgttgcaaacagataaaaatttgcaatatctaacccttaactcatttattt 2723820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 8765330 - 8765244
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| || |||| ||||||||| |||||||||||||||||||| |||||||| ||||||||||| |||||||||||||    
T  8765330 ggggattcgaagaatcttaactgctgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaacatataaaaattgcaa 8765244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 8170096 - 8170013
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggtaactt-gctatgttgcaaacagataaaaatt 165  Q
    ||||||||||||| ||||||||||||| ||| ||||||||||| ||||||||||| || |||||||||||||||||||||||||    
T  8170096 ggggattcgaagaatcctaaccgctgcatacttttctgcaaccaaaaacaggtaaattcgctatgttgcaaacagataaaaatt 8170013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 166
Target Start/End: Original strand, 12754797 - 12754881
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggt-aacttgctatgttgcaaacagataaaaattg 166  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||| |||| ||| ||||||||||| ||||||||||    
T  12754797 ggggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaccaggtaaactagctctgttgcaaacaaataaaaattg 12754881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 16229831 - 16229915
Alignment:
Q  87 gattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggtaactt-gctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||||| ||||||||||||||||| ||| ||||||| ||||||||||| || ||| |||||||||||||||||||||||||    
T  16229831 gattcgaagaatcctaaccgctgcttacttttttgcaaccaaaaacaggtaaattcgctctgttgcaaacagataaaaattgcaa 16229915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 88 - 166
Target Start/End: Complemental strand, 932963 - 932884
Alignment:
Q  88 attcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattg 166  Q
    ||||||||| | ||||||||||||||| ||||||||||||||||| || |||||||| ||||||||||| ||||||||||    
T  932963 attcgaagaatactaaccgctgcttacttttctgcaaccaaaacaagtaaacttgctctgttgcaaacaaataaaaattg 932884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 8267219 - 8267076
Alignment:
Q  23 atagtctacttagaataaatgaacgcgacatgaatgttatt-aat-tccaacaaa-tgattaggggggattcgaagagtcctaaccgctgcttacatttc 119  Q
    |||||||| |||  |||| | |||| ||||||||||||||| ||| ||||||||| | | |||||||||||| |||||||||||||||| || || |||     
T  8267219 atagtctatttaagataattaaacgtgacatgaatgttatttaatatccaacaaaataaataggggggattcaaagagtcctaaccgctactgactttta 8267120  T
Q  120 tgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaa 163  Q
    ||||||||||| |||||| ||||| |||||| |||||| |||||    
T  8267119 tgcaaccaaaataggtaatttgctctgttgctaacagaaaaaaa 8267076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 82 - 157
Target Start/End: Complemental strand, 8319271 - 8319196
Alignment:
Q  82 ggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacaga 157  Q
    |||||||||| ||||||||||||| |||||||| ||| ||||||||||| |||||| |||||||||||| ||||||    
T  8319271 ggggggattcaaagagtcctaaccactgcttacttttatgcaaccaaaataggtaatttgctatgttgctaacaga 8319196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 20023427 - 20023512
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaactt-gctatgttgcaaacagataaaaattgca 168  Q
    |||||||| |||| ||||||| ||| ||||| |||||||||||||||| ||||| || ||| ||||||||||||||||||||||||    
T  20023427 ggggattcaaagaatcctaactgctacttacttttctgcaaccaaaactggtaaattcgctctgttgcaaacagataaaaattgca 20023512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 19925504 - 19925576
Alignment:
Q  92 gaagagtcctaaccgctgcttacatttctgc-aaccaaaacaggt-aacttgctatgttgcaaacagataaaa 162  Q
    ||||| ||||||||||||||||| ||||||| ||||||||||||| |||||||| ||||||||||| ||||||    
T  19925504 gaagaatcctaaccgctgcttacttttctgcaaaccaaaacaggtaaacttgctctgttgcaaacatataaaa 19925576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 21302145 - 21302061
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaa-ccaaaacaggt-aacttgctatgttgcaaacagataaaaatt 165  Q
    |||||||||||||| |||||||||||| |||  ||||||||| | |||| |||| |||||||| |||||||||||||||||||||    
T  21302145 gggggattcgaagaatcctaaccgctgtttatttttctgcaatcaaaaaaaggtaaacttgctctgttgcaaacagataaaaatt 21302061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 106
Target Start/End: Original strand, 821316 - 821411
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtta-ttaattccaacaaatgattaggggggattcgaagagtcctaaccg 106  Q
    |||||||||| |||||||||||||||||| ||||| |||| ||| ||||| ||||||||||||||| | ||| || |||||  ||| |||||||||    
T  821316 tcatcacttaaatagtctacttagaataattgaactcgacttgactgttatttaattccaacaaataaatagaggagattcagagaatcctaaccg 821411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 3116321 - 3116380
Alignment:
Q  111 ttacatttctgcaaccaaaac-aggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||| |||||||||||||||| ||||| |||||| |||||||||||||||||||||||||    
T  3116321 ttacttttctgcaaccaaaaccaggtatcttgctctgttgcaaacagataaaaattgcaa 3116380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 6290196 - 6290051
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtt-attaattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    ||||||||||||||||||||||||| ||| |||||  |||   |||||| ||||||||| |||||||| || ||||||||| || | |||||||| | ||    
T  6290196 tcatcacttagatagtctacttagactaattgaacttgactataatgttaattaattcctacaaatgagta-gggggattcaaataatcctaaccaccgc 6290098  T
Q  111 ttacatttctgcaaccaaaacaggtaac-ttgctatgttgcaaacaga 157  Q
    | ||| ||||||||  |||||| ||||| ||||| |||||||||||||    
T  6290097 taaca-ttctgcaattaaaacaagtaactttgctctgttgcaaacaga 6290051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 8882997 - 8883084
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaac-aggtaa-cttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| ||||||| || |||||  |||||||||| ||||  |||||| || |||||||||||||||||||||||||||||    
T  8882997 ggggattcgaagaatcctaactgcagcttaattttctgcaactaaaaataggtaaactcgctatgttgcaaacagataaaaattgcaa 8883084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 170
Target Start/End: Complemental strand, 19908531 - 19908444
Alignment:
Q  85 gggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaattgcaat 170  Q
    |||||||||||| ||||||| ||||||||| ||||||||||| |||| |||| |||||||| ||||||||| | ||||||||| ||||    
T  19908531 gggattcgaagaatcctaactgctgcttacttttctgcaaccaaaaataggtaaacttgctttgttgcaaaaaaataaaaattccaat 19908444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 166
Target Start/End: Original strand, 27413778 - 27413855
Alignment:
Q  91 cgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaattg 166  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||||| || | ||| ||||| ||||||||||||||||    
T  27413778 cgaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaaatcgctctgttgaaaacagataaaaattg 27413855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 13908055 - 13908151
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtt-attaattccaacaaatgattaggggggattcgaagagtcctaaccgc 107  Q
    ||||||| |||||||||||||| |||||| |||||  ||| ||| |||| |||||||||||||||||| | | |||||||| || | ||||||||||    
T  13908055 tcatcacctagatagtctacttcgaataattgaacatgacttgattgtttattaattccaacaaatgagtggaggggattcaaataatcctaaccgc 13908151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 20429920 - 20429849
Alignment:
Q  99 cctaaccgctgcttacatttctgcaaccaaaacaggtaa-cttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||| ||| |||| ||||||||||||||| || ||| |||||| ||||||||||| |||||||||||||    
T  20429920 cctaaccactgattacttttctgcaaccaaaatagataaacttgctctgttgcaaacatataaaaattgcaa 20429849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 19576109 - 19576182
Alignment:
Q  98 tcctaaccgctgcttacatttctgcaaccaaaac-aggtaacttg-ctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||||| | |||||||||||||||  |||||| ||  || |||||||||||||||||||||||||    
T  19576109 tcctaaccgctgcttgcttttctgcaaccaaaaataggtaaattcactttgttgcaaacagataaaaattgcaa 19576182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 22245600 - 22245527
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtt-attaattccaacaaatgattaggg 84  Q
    ||||||||||||||||| ||||||||||| |||||| ||  ||| |||| ||||||||||| |||||| |||||    
T  22245600 tcatcacttagatagtcaacttagaataactgaacgtgaattgactgttaattaattccaataaatgaataggg 22245527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 7494915 - 7495035
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttattaat-tccaacaa-atgattaggggggattcgaagagtcctaaccgctg 109  Q
    |||||||||  ||||||||| ||  |||||| |||||||||||| |||||||  | |||||||| || | ||| ||||||||||| | |||||| | |||    
T  7494915 tcatcacttgtatagtctacctaagataaataaacgcgacatgactgttatttttatccaacaatataaatagaggggattcgaataatcctaatccctg 7495014  T
Q  110 cttacatttctgcaaccaaaa 130  Q
    ||||| ||||| |||||||||    
T  7495015 cttacttttctacaaccaaaa 7495035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 19909847 - 19909934
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaac-caaaacaggtaact-tgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||| |||| ||||||||||||||||| ||||||||||  ||||||||||| |  ||| | || |||| |||||||||||||||    
T  19909847 ggggattcaaagaatcctaaccgctgcttacttttctgcaacaaaaaacaggtaaatgcgcttttttacaaagagataaaaattgcaa 19909934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 5508561 - 5508477
Alignment:
Q  83 gggggattcgaagagtcct--aaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaatt 165  Q
    |||||||||||||| ||||  |||| ||| |||| |||||||||| |||| || |||||||||| | |||||||||||||||||||    
T  5508561 gggggattcgaagaatcctctaaccactg-ttacttttctgcaacaaaaaacatgtaacttgctctattgcaaacagataaaaatt 5508477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 169
Target Start/End: Complemental strand, 12411375 - 12411289
Alignment:
Q  81 aggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||||||||||| |||||||||   |||||  |||||||||| |||||||| |||||| | ||||||||||  |||||||||||||    
T  12411375 aggggggattcgaagaatcctaaccgtcacttactgttctgcaacc-aaacaggtaaacttgttgtgttgcaaac--ataaaaattgcaa 12411289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 19167620 - 19167535
Alignment:
Q  85 gggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaac-aggtaactt-gctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||| || | ||||||||| ||||||| |||||||||||||||  |||||| || ||| | |||||||||||||||||||||||    
T  19167620 gggattcaaataatcctaaccgttgcttac-tttctgcaaccaaaaataggtaaattcgctttattgcaaacagataaaaattgcaa 19167535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 7478154 - 7478275
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aat-tccaacaa-atgattaggggggattcgaagagtcctaaccgct 108  Q
    |||||||||  ||||||||| ||  |||||| |||||||||| | ||||||| ||| |||||||| || | ||| ||||||||||| | |||||| | ||    
T  7478154 tcatcacttgtatagtctacctaagataaataaacgcgacataactgttatttaatatccaacaatataaatagaggggattcgaataatcctaatccct 7478253  T
Q  109 gcttacatttctgcaaccaaaa 130  Q
    |||||||||||| |||| ||||    
T  7478254 gcttacatttctacaactaaaa 7478275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 194
Target Start/End: Complemental strand, 39882 - 39699
Alignment:
Q  13 catcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaa-tgattaggggggattcgaagagtcctaaccgctgc 110  Q
    ||||||||  ||||||||||||  |||| | ||||  | |||||||| ||| || ||||||||| | | |||||||||||| ||||||| ||||||||||    
T  39882 catcacttgtatagtctacttaagataactaaacgtaagatgaatgtaatttaactccaacaaaataaataggggggattcaaagagtcataaccgctgc 39783  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttattt 194  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||| |  ||||||||||    
T  39782 ttacttttctgcaaccaaaacaggtaacttgctctgttgcaaacagataaaaattgcaatctctaattcttatctcttttattt 39699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 12012615 - 12012797
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aat-tccaacaaatgattaggggggattcgaagagtcctaaccgctg 109  Q
    |||||||||  ||||||||||||  |||||| |||| ||||||||||||||| ||| |||||||||| | |||||| |||||||||| |||||| || ||    
T  12012615 tcatcacttgtatagtctacttaagataaataaacgtgacatgaatgttatttaatatccaacaaataaatagggg-gattcgaagaatcctaatcgttg 12012713  T
Q  110 cttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttatt 193  Q
     |||| ||| |||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||| || || |||||||||    
T  12012714 tttacttttgtgcaaccaaaacaggtaactcgctatgttgcaaacaaataaaaattgcaatctctaacccttaactcttttatt 12012797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 12 - 204
Target Start/End: Original strand, 17121303 - 17121495
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    |||||||||||||| ||||||||  |||| | |||||||||||||||||||| ||||||||||||| | ||||  | ||||||||| |||||||||||||    
T  17121303 tcatcacttagataatctacttaagataagtaaacgcgacatgaatgttatttaattccaacaaataaataggaag-attcgaagaatcctaaccgctgc 17121401  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatc-taactctcaaatcttttatttatattttgtt 204  Q
    |||| ||||||||||||||||| |||||||||| | ||||||||| || |||| |||||| || || | ||||| ||||||||||| ||||||||    
T  17121402 ttacttttctgcaaccaaaacaagtaacttgctctattgcaaacaaatgaaaaatgcaatctcttatccctcaactcttttattta-attttgtt 17121495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 84 - 240
Target Start/End: Original strand, 32382883 - 32383040
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatct-aactctca 182  Q
    |||||||| |||| ||||||| |||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||  |||    
T  32382883 ggggattcaaagaatcctaacggctgctaacatttctgcaaccaaaacaggtaatttgctctgttgcaaacagataaaaattgcaatatctcaaccttca 32382982  T
Q  183 aatcttttatttatatt-ttgttcaccaaataagtaacgtaaatttgtttggacgaaac 240  Q
    | |||||||||||| || ||||| |  ||||| |||||  ||| |||||||||||||||    
T  32382983 actcttttatttattttattgttaaaaaaataggtaacacaaa-ttgtttggacgaaac 32383040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 176
Target Start/End: Complemental strand, 28008388 - 28008237
Alignment:
Q  27 tctacttagaataaatgaacgcgacatgaatgttatt-aat-tccaacaaatgattaggggggattcgaagagtcctaaccgctgcttacatttctgcaa 124  Q
    ||||||||  |||||| |||||||||||| ||||||| ||| | |||||||| | |||||| ||||| |||| ||||||||||||||||| |||||||||    
T  28008388 tctacttaagataaataaacgcgacatgactgttatttaatatacaacaaataaataggggagattcaaagaatcctaaccgctgcttacttttctgcaa 28008289  T
Q  125 ccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaa 176  Q
    |||||||| |||| ||||| | ||| |||||||||||||||||||| |||||    
T  28008288 ccaaaacaagtaatttgctctattggaaacagataaaaattgcaatctctaa 28008237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 51 - 176
Target Start/End: Complemental strand, 16360129 - 16360003
Alignment:
Q  51 catgaatgtta-ttaattccaacaaatgattaggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttg 149  Q
    ||||||||||| || |||||||||||| | |||| |||||||| |||||||||||   ||||| | |||||||||||||||||||||||||||| |||||    
T  16360129 catgaatgttactttattccaacaaataactaggtgggattcgtagagtcctaacttatgctttcttttctgcaaccaaaacaggtaacttgctttgttg 16360030  T
Q  150 caaacagataaaaattgcaatatctaa 176  Q
    |||||| |||||||||||||| |||||    
T  16360029 caaacaaataaaaattgcaatctctaa 16360003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 84 - 194
Target Start/End: Original strand, 18100888 - 18100998
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaa 183  Q
    |||||||| || | || |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || ||    
T  18100888 ggggattcaaataatcataaccgctgcttacttttctgcaaccaaaacatgtaacttgctatgttgcaaacagataaaaattgcaatttctaacccttaa 18100987  T
Q  184 atcttttattt 194  Q
     |||| |||||    
T  18100988 ctcttctattt 18100998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 170
Target Start/End: Original strand, 15807821 - 15807981
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aat-tccaacaaatgattaggggggattcgaagagtcctaaccgctg 109  Q
    |||||||||  ||||||||||||  |||| | ||| |||||||||| ||||| ||| |||||| ||| | ||| |||||||| |||| |||||| |||||    
T  15807821 tcatcacttgtatagtctacttaagataactaaacacgacatgaatattatttaatatccaacgaataaatagtggggattcaaagaatcctaatcgctg 15807920  T
Q  110 cttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaat 170  Q
    ||||  ||||| |||||||||| ||||||||||| ||||||||||| ||||||||||||||    
T  15807921 cttatttttctacaaccaaaactggtaacttgctctgttgcaaacaaataaaaattgcaat 15807981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 22664429 - 22664345
Alignment:
Q  86 ggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaat 170  Q
    |||||| |||||||||||||||| ||||| ||||||||||||||||| |||||||||| |||| |||||| ||||||||||||||    
T  22664429 ggattcaaagagtcctaaccgctacttacttttctgcaaccaaaacatgtaacttgctctgttacaaacaaataaaaattgcaat 22664345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 163
Target Start/End: Complemental strand, 12208830 - 12208746
Alignment:
Q  80 taggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaa 163  Q
    ||||||||||||||||| ||||||||||||||||| |||||||| | ||||||||| |||||||| |||||||||||||| ||||    
T  12208830 taggggggattcgaagaatcctaaccgctgcttacttttctgcagctaaaacaggtaaacttgctctgttgcaaacagattaaaa 12208746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 163
Target Start/End: Original strand, 21334589 - 21334672
Alignment:
Q  81 aggggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggtaacttgctatgttgcaaacagataaaaa 163  Q
    |||||||||||||||| |||||||||||| |||| ||||| ||||| |||| |||||||||||||| |||||||||||||||||    
T  21334589 aggggggattcgaagaatcctaaccgctgtttacttttcttcaaccaaaaataggtaacttgctattttgcaaacagataaaaa 21334672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 166
Target Start/End: Complemental strand, 21449301 - 21449218
Alignment:
Q  85 gggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaattg 166  Q
    |||||||||||| ||||||||||||||||| |||||||| || ||||||| | |||||||||||||||||||||||||||||||    
T  21449301 gggattcgaagaatcctaaccgctgcttacttttctgcatccaaaaacagttaaacttgctatgttgcaaacagataaaaattg 21449218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 67 - 166
Target Start/End: Original strand, 23037868 - 23037969
Alignment:
Q  67 tccaacaaatgattaggggggattcgaagagtcct--aaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaa 163  Q
    |||||||||| | ||||||||||||||||| ||||  |||| ||| |||||||||||||||||||| || |||||||||||||||||||||||| |||||    
T  23037868 tccaacaaataaataggggggattcgaagaatcctctaaccactg-ttacatttctgcaaccaaaaacaagtaacttgctatgttgcaaacagaaaaaaa 23037966  T
Q  164 ttg 166  Q
    |||    
T  23037967 ttg 23037969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 9401730 - 9401644
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| ||||||||||| ||||| ||| || ||||||||||||| ||||| || |||||||||||||||||||||||||    
T  9401730 ggggattcgaagaatcctaaccgctacttacttttttgtaaccaaaacaggtaaacttactctgttgcaaacagataaaaattgcaa 9401644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 169
Target Start/End: Complemental strand, 17359461 - 17359299
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aat-tccaacaa-atgattaggggggattcgaagagtcctaaccgct 108  Q
    |||||||||  ||||||||| ||  |||||| |||||||||||| ||||||| ||| |||||||| || | ||| ||||||||||||| ||||||||||     
T  17359461 tcatcacttgtatagtctacctaagataaataaacgcgacatgattgttatttaatatccaacaatataaatagaggggattcgaagaatcctaaccgca 17359362  T
Q  109 gcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
     ||||| ||| ||||||| ||||||||| || |||||||||||| | ||||||||||||||||    
T  17359361 tcttacttttatgcaaccaaaaacaggtaaatttgctatgttgccagcagataaaaattgcaa 17359299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 73 - 194
Target Start/End: Complemental strand, 22620498 - 22620376
Alignment:
Q  73 aaatgattaggggggattcgaagagtcctaaccgctgcttacattt-ctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaata 171  Q
    |||||| ||| |||||||  |||| || |||||||||||||||||| || |||||||||||||||||| | | |||||||||||||||||||  |||||     
T  22620498 aaatgaatagaggggatttaaagaatcttaaccgctgcttacattttctacaaccaaaacaggtaactcgatttgttgcaaacagataaaaaaggcaatc 22620399  T
Q  172 tctaactctcaaatcttttattt 194  Q
    |||||| ||||| || |||||||    
T  22620398 tctaaccctcaactcctttattt 22620376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 12 - 194
Target Start/End: Complemental strand, 24281572 - 24281391
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtta-ttaattccaac-aaatgattaggggggattcgaagagtcctaaccgctg 109  Q
    |||||||||  ||||||||||||  |||| | |||| ||||||||||||| ||||||||||| |||| | |||||||  ||| ||| |||||||| ||||    
T  24281572 tcatcacttgcatagtctacttaagataactaaacgggacatgaatgttatttaattccaacaaaataaataggggg--ttcaaagtgtcctaactgctg 24281475  T
Q  110 cttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttattt 194  Q
    | ||| ||||| ||||| ||||| ||||||| || |||| |||||||||| |||||||||| |||||| ||  | ||||||||||    
T  24281474 catacttttctacaacc-aaacatgtaactttctctgtttcaaacagatagaaattgcaatctctaaccctttactcttttattt 24281391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 15543840 - 15543928
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaac-caaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||  ||||||||| ||||| |||||||||||||| |||||||||||||    
T  15543840 gggggattcgaagaatcctaaccgttgcttacttttctgcaacaaaaaacaggtaaacttactatgttgcaaacaaataaaaattgcaa 15543928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 167
Target Start/End: Original strand, 21973078 - 21973164
Alignment:
Q  83 gggggattcgaagagtcct--aaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgc 167  Q
    |||||||||||||| ||||  |||||||| |||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  21973078 gggggattcgaagaatcctctaaccgctg-ttacttttctgcaaccaaaaacaggtaacttgttatgttgcaaacagataaaaattgc 21973164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 29242717 - 29242645
Alignment:
Q  98 tcctaaccgctgcttacatttctgcaaccaaaacaggtaa-cttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||| ||||| ||| |||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  29242717 tcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 29242645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 16916820 - 16916907
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggtaactt-gctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| ||||| ||||||||||| ||||||||||| ||||||||||| || ||| ||||||||| |||||||||||||||    
T  16916820 ggggattcgaagaatcctacccgctgcttacttttctgcaaccaaaaacaggtaaattcgctctgttgcaaagagataaaaattgcaa 16916907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 33190892 - 33190809
Alignment:
Q  93 aagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaa 176  Q
    |||| ||||||||||||||||| ||||||||| |||| ||||||||||||  ||||||||||| ||||||||| |||| |||||    
T  33190892 aagaatcctaaccgctgcttacttttctgcaatcaaaccaggtaacttgcactgttgcaaacaaataaaaattacaatctctaa 33190809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 727680 - 727594
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| || ||||||||||||   |||||||||||||||||||| || || |||||||||||||| |||||||||||||    
T  727680 ggggattcgaagaatcttaaccgctgctttactttctgcaaccaaaacaggtaaattttctatgttgcaaacaaataaaaattgcaa 727594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 177
Target Start/End: Original strand, 9787753 - 9787847
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgcaatatctaac 177  Q
    |||||||| |||||| ||||||||  ||||| ||||||||||||||| ||||| ||||||| |||||||||||| | ||||||||||| ||||||    
T  9787753 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgttgcaaacagttcaaaattgcaatctctaac 9787847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 165
Target Start/End: Original strand, 16069440 - 16069518
Alignment:
Q  88 attcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaatt 165  Q
    ||||||||| ||||||| ||||||||| ||||| |||||||||||||| |||||||| |||||||| ||||||||||||    
T  16069440 attcgaagaatcctaactgctgcttacttttctacaaccaaaacaggtaaacttgctctgttgcaagcagataaaaatt 16069518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 165
Target Start/End: Original strand, 17610127 - 17610213
Alignment:
Q  81 aggggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaatt 165  Q
    ||||||| ||| |||| ||||||||||||||||| ||||||||||| ||||||||| |||||||| ||||||||||| |||||||||    
T  17610127 aggggggtttcaaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgttgcaaacatataaaaatt 17610213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 22623115 - 22623029
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||| ||||| ||||||| ||||||||| |||||||||||||||||||| |||||||| ||||||||| | |||||||| ||||    
T  22623115 ggggatttgaagaatcctaacagctgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaatatataaaaatggcaa 22623029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 21666483 - 21666565
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaatt 165  Q
    ||||||||||||| ||||||||  ||||||| ||||| |||||||||||||| |||||| | | |||||||||||||||||||    
T  21666483 ggggattcgaagaatcctaaccattgcttacttttctacaaccaaaacaggtaaacttgttgtcttgcaaacagataaaaatt 21666565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 155
Target Start/End: Original strand, 24267586 - 24267729
Alignment:
Q  13 catcacttagatagtctacttagaataaatgaacgcgacatgaatgtta-ttaattccaacaaatgattaggggggattcgaagagtcctaaccgctgct 111  Q
    ||||||||| |||||||||||||||||| ||| |||||| ||| | ||| ||||||||||||||| | ||| |||||||| |||| |||||||||  |||    
T  24267586 catcacttatatagtctacttagaataa-tgagcgcgacttgattattaattaattccaacaaattaatagaggggattcaaagaatcctaaccgtcgct 24267684  T
Q  112 tacatttctgcaaccaaaacaggtaa--cttgctatgttgcaaaca 155  Q
     ||| |||||||| ||||||| ||||   ||||| |||||||||||    
T  24267685 aaca-ttctgcaatcaaaacaagtaaattttgctctgttgcaaaca 24267729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 139
Target Start/End: Original strand, 25960978 - 25961094
Alignment:
Q  23 atagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaa-tgattaggggggattcgaagagtcctaaccgctgcttacatttct 120  Q
    ||||||||||||  ||||   ||| |||||||||||||||| |||||||||||| | | ||||||| |||| |||||||||||||||| ||||| |||||    
T  25960978 atagtctacttaagataacgaaacacgacatgaatgttatttaattccaacaaaataaataggggg-attcaaagagtcctaaccgcttcttacttttct 25961076  T
Q  121 gcaaccaaaacaggtaact 139  Q
    |||||| ||||||||||||    
T  25961077 gcaacc-aaacaggtaact 25961094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 13345208 - 13345296
Alignment:
Q  80 taggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||||| | |||||||||||| |||| |||||  |||||||||||||||| |||||||||  ||| ||||||||| |||||    
T  13345208 taggggggattcgaaaaatcctaaccgctgtttacttttcttaaaccaaaacaggtaac-tgctatgttttaaatagataaaaactgcaa 13345296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 16179217 - 16179144
Alignment:
Q  98 tcctaaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||||||| ||||||||||| |||| |||| |||||||| |||||||| ||||||||||||||||    
T  16179217 tcctaaccgctgcttacttttctgcaaccaaaaataggtaaacttgctctgttgcaatcagataaaaattgcaa 16179144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 51473783 - 51473836
Alignment:
Q  116 tttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||||| || ||||||| |||||||||||||||||||||||||||    
T  51473783 tttctgcaaccaaaatagataacttgatatgttgcaaacagataaaaattgcaa 51473836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 16787631 - 16787687
Alignment:
Q  113 acatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||| ||||||||||| |||| ||||||||||||||||| |||||||||||||    
T  16787631 acatttctccaaccaaaacaagtaatttgctatgttgcaaacatataaaaattgcaa 16787687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 18736126 - 18736213
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| |||| |||||||| ||| ||||||||||| |||| |||| |||||||| | |||||||||||||||| ||||||    
T  18736126 ggggattcgaagaatccttaccgctgcctacttttctgcaaccaaaaataggtaaacttgctctattgcaaacagataaaatttgcaa 18736213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 18825868 - 18825782
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||| |||| |||| | |||||||||| ||||| ||||||||||| || || ||||| ||||| |||||||||||||||||||    
T  18825868 ggggattcaaagaatccttatcgctgcttacttttctacaaccaaaacaagtaaatttgctttgttgtaaacagataaaaattgcaa 18825782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 23180009 - 23179923
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||| | |||| |||||||||||| ||||| ||||||||| |||| || ||| ||| ||| |||||||||||||||||||    
T  23180009 ggggattcgaataatccttaccgctgcttacttttctccaaccaaaaaaggtaaaattgttattttgtaaacagataaaaattgcaa 23179923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 141
Target Start/End: Complemental strand, 24214763 - 24214705
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttg 141  Q
    ||||||||| |||||||||||||||| ||||  |||||||||||||| |||||||||||    
T  24214763 gggggattcaaagagtcctaaccgctacttatttttctgcaaccaaaccaggtaacttg 24214705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 169
Target Start/End: Complemental strand, 44795611 - 44795507
Alignment:
Q  67 tccaacaaatgattaggggggattcgaagagtcct--aaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaa 163  Q
    |||||||||| | | ||||||||||||||| ||||  ||||| || |||||||||||||||||||| ||| ||||| ||| || |||||||| |||||||    
T  44795611 tccaacaaataaattggggggattcgaagaatcctctaaccgttg-ttacatttctgcaaccaaaaacagataactcgctttgctgcaaacatataaaaa 44795513  T
Q  164 ttgcaa 169  Q
    ||||||    
T  44795512 ttgcaa 44795507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 18529080 - 18529149
Alignment:
Q  98 tcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattg 166  Q
    |||||||| |||||||| ||||| |||||||||||||| |||||||| |||||||||  |||||||||||    
T  18529080 tcctaaccactgcttacttttctacaaccaaaacaggtaaacttgctctgttgcaaattgataaaaattg 18529149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 25405519 - 25405591
Alignment:
Q  98 tcctaaccgctgcttacatttctgcaaccaaaa-caggtaa-cttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||||||| ||||||||||||||| || |||| |||||| ||||||||||| |||||||||||||    
T  25405519 tcctaaccgctgcttac-tttctgcaaccaaaaacaagtaaacttgctctgttgcaaacaaataaaaattgcaa 25405591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 138
Target Start/End: Original strand, 15813368 - 15813471
Alignment:
Q  37 ataaatgaacgcgacatgaatgttatt-aat-tccaaca-aatgattaggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacag 133  Q
    |||||| |||||||||||||||||||| ||| | ||||| ||| | ||||||| |||| |||| | ||||| ||||||||| ||||||||||||||||||    
T  15813368 ataaataaacgcgacatgaatgttatttaatatacaacataataaataggggg-attctaagaatactaactgctgcttacttttctgcaaccaaaacag 15813466  T
Q  134 gtaac 138  Q
    |||||    
T  15813467 gtaac 15813471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 14781740 - 14781827
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| ||||||| |||| | || ||||||||||| ||||||||| || ||||| || |||||||| |||||||||||||    
T  14781740 ggggattcgaagaatcctaactgctgatcacttttctgcaaccaaaaacaggtaaatttgctctgatgcaaacatataaaaattgcaa 14781827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 21847795 - 21847701
Alignment:
Q  146 gttgcaaacagataaaaattgcaatatctaactctcaaatcttttatttatattttgtt-caccaaataagtaacgtaaatttgtttggacgaaac 240  Q
    |||||||||| |||||||||||||| |||| |  |||| ||||||||||  ||||||||  |||| ||||||||||| || |||||||||||||||    
T  21847795 gttgcaaacaaataaaaattgcaatctctatccttcaactcttttattttaattttgttaaaccagataagtaacgtgaa-ttgtttggacgaaac 21847701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 169
Target Start/End: Original strand, 21987872 - 21987955
Alignment:
Q  88 attcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||| |||| |||| |||||||||||| ||| ||||||| ||||||||| || ||||| ||||||||||| |||||||||||||    
T  21987872 attcaaagaatccttaccgctgcttacttttatgcaaccaaaaacaggtaaagttgctctgttgcaaacatataaaaattgcaa 21987955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 169
Target Start/End: Original strand, 15813012 - 15813116
Alignment:
Q  67 tccaacaaatgattaggggggattcgaagagtc--ctaaccgctgcttacatttctgcaaccaaa-acaggtaacttgctatgttgcaaacagataaaaa 163  Q
    |||||||||| | |||| | |||||||||| ||  || ||||||| |||| ||| ||||| |||| |||||||||||||||||||| ||||| |||||||    
T  15813012 tccaacaaataaataggtgtgattcgaagaatcatctgaccgctg-ttacttttttgcaagcaaagacaggtaacttgctatgttggaaacatataaaaa 15813110  T
Q  164 ttgcaa 169  Q
    ||||||    
T  15813111 ttgcaa 15813116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 34481174 - 34481108
Alignment:
Q  103 accgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||| || |||||| | |||| ||||||||||||||||| |||| |||||| |||||||||||||    
T  34481174 accgctactaacatttttacaacaaaaacaggtaacttgctttgttccaaacatataaaaattgcaa 34481108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 169
Target Start/End: Original strand, 31235927 - 31236010
Alignment:
Q  88 attcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaa-cttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||| |||| || |||||| ||||||| ||| ||||||||||| || |||| |||||| ||||||||| |||||||||||||||    
T  31235927 attcaaagaatcttaaccgttgcttacttttatgcaaccaaaaacaagtaaacttgctctgttgcaaagagataaaaattgcaa 31236010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 14779766 - 14779704
Alignment:
Q  108 tgcttacatttctgcaaccaaaacaggtaa-cttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||| ||||| ||||||||||| |||| |||| ||||||| ||||| |||||||||||||    
T  14779766 tgcttacttttcttcaaccaaaacaagtaaacttgatatgttgtaaacaaataaaaattgcaa 14779704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 18830670 - 18830608
Alignment:
Q  108 tgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||| ||| |||||||||||||||| || || || ||||||||||||||| |||||||||    
T  18830670 tgcttacttttatgcaaccaaaacaggtaaaatttctctgttgcaaacagatagaaattgcaa 18830608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 16787547 - 16787612
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtt-attaattccaacaaat 76  Q
    |||||||||||||| |||||| ||||||| | || ||||| ||| |||| ||||||||||||||||    
T  16787547 tcatcacttagatattctactgagaataattcaatgcgacttgactgttaattaattccaacaaat 16787612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 17837810 - 17837718
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtta-ttaattccaacaaatgattaggggggattcgaagagtcctaa 103  Q
    |||||| |||||| ||||||||| ||||| | |||  ||| ||| ||||| ||||||||||||||||  ||| |||||||| |||| ||||||    
T  17837810 tcatcagttagatggtctacttaaaataatttaacttgacttgactgttaattaattccaacaaatggatagaggggattcaaagaatcctaa 17837718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 24054188 - 24054108
Alignment:
Q  87 gattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaactt-gctatgttgcaaacagataaaaattg 166  Q
    |||||||||| ||||||| |  |||| | ||||  ||||||||||| |||| || ||| ||||||||||||||||||||||    
T  24054188 gattcgaagaatcctaactgtcgctttcttttcaacaaccaaaacaagtaaattcgctctgttgcaaacagataaaaattg 24054108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 40
Target Start/End: Complemental strand, 34481239 - 34481211
Alignment:
Q  12 tcatcacttagatagtctacttagaataa 40  Q
    |||||||||||||||||||||||||||||    
T  34481239 tcatcacttagatagtctacttagaataa 34481211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 168
Target Start/End: Complemental strand, 9642174 - 9642018
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    |||| |||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||||||| ||||||| |||| |||| |  ||||||||||    
T  9642174 tcattacttagatagtctacttagaataactgaacgtgacattactgttatttaattccaacaaatgaataggggg-attcaaagaattttaaccgctgc 9642076  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgca 168  Q
    | ||||||||||||| |||||| |||| ||||| |||||||| |||||||||||||||    
T  9642075 taacatttctgcaactaaaacaagtaatttgctctgttgcaagcagataaaaattgca 9642018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 170
Target Start/End: Original strand, 30121956 - 30122115
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    |||||||||||||||||||||||  |||| | ||| |||||| || |||||| ||||||||||||| | ||||||| |||| ||||||  ||||| ||||    
T  30121956 tcatcacttagatagtctacttaagataactaaacacgacataaaagttatttaattccaacaaataaatagggggaattcaaagagttataaccactgc 30122055  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaat 170  Q
    |||| ||||||||||||||| ||||||||| || |||| |||||||||||||||||||||    
T  30122056 ttacttttctgcaaccaaaataggtaacttactctgttacaaacagataaaaattgcaat 30122115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 23 - 177
Target Start/End: Complemental strand, 34497402 - 34497247
Alignment:
Q  23 atagtctacttagaataaatgaacgcgacatgaatgttatt-aat-tccaacaaatgattaggggggattcgaagagtcctaaccgctgcttacatttct 120  Q
    ||||| ||||||  |||||| || | ||||||||||||||| ||| |||||||||||| ||||||| |||| | || ||||||||||||||||| |||||    
T  34497402 atagtttacttaagataaataaatgtgacatgaatgttatttaatatccaacaaatgaataggggg-attcaaggaatcctaaccgctgcttacttttct 34497304  T
Q  121 gcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaac 177  Q
    |||| |||| |||||||| |||||||||||||| |||||||||||||||| ||||||    
T  34497303 gcaagcaaaccaggtaacatgctatgttgcaaaaagataaaaattgcaatctctaac 34497247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 194
Target Start/End: Original strand, 25182238 - 25182413
Alignment:
Q  23 atagtctacttagaataaatgaacgcgacatgaatgttattaa--ttccaacaaa-tgattaggggggattcgaagagtcctaaccgctgcttacatttc 119  Q
    ||||||||||||  |||| | |||| ||||||||||||||| |  |||||||||| | | || ||||||||| ||||||||||||| ||| || | ||||    
T  25182238 atagtctacttaagataactaaacgtgacatgaatgttatttaatttccaacaaagtaaatatgggggattcaaagagtcctaaccactgtttccttttc 25182337  T
Q  120 tgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttattt 194  Q
    ||||||||||| ||||||||||||| ||||||||| |||||||||||||||| |||||| || |  ||||||||||    
T  25182338 tgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctaacccttatctcttttattt 25182413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 170
Target Start/End: Complemental strand, 7983839 - 7983719
Alignment:
Q  50 acatgaatgttattaattccaacaaa-tgattaggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgtt 148  Q
    ||||||||||| |||| ||||||||| | | ||||||| |||| |||| ||||| ||| ||||||| |||||||||||||| |||| ||||||||||||     
T  7983839 acatgaatgtttttaaatccaacaaaataaataggggg-attcaaagaatcctacccgttgcttacttttctgcaaccaaaccaggcaacttgctatgtc 7983741  T
Q  149 gcaaacagataaaaattgcaat 170  Q
    ||||||||||||||||||||||    
T  7983740 gcaaacagataaaaattgcaat 7983719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 102 - 194
Target Start/End: Complemental strand, 14528355 - 14528263
Alignment:
Q  102 aaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttattt 194  Q
    ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||| ||||||||||||| |||||| || || | ||||||||    
T  14528355 aaccgctgcttacttttctgcaaccaaaccaggtaacttgctttgttgcaaacagctaaaaattgcaatctctaacccttaactattttattt 14528263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 84 - 221
Target Start/End: Original strand, 44010898 - 44011037
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctca 182  Q
    |||| |||||||| || |||||||| |||||  |||||||||||||| || |||||||| | ||||||||||| |||||||||||||| |||| |  |||    
T  44010898 gggggttcgaagaatcttaaccgctacttactcttctgcaaccaaaaacatgtaacttgttctgttgcaaacatataaaaattgcaatctctatcattca 44010997  T
Q  183 aatcttttatttatattttgtt-caccaaataagtaacgt 221  Q
    |||||||||||| |||||||||  |||||||| |||||||    
T  44010998 aatcttttatttttattttgttaaaccaaatatgtaacgt 44011037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 177
Target Start/End: Complemental strand, 13698079 - 13697986
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaac 177  Q
    ||||||||| ||||||| ||| | |||||||| |||||||||||||| ||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  13698079 gggggattcaaagagtcataatcactgcttacttttctgcaaccaaa-caggtaacttgctctgttgcaaagagataaaaattgcaatctctaac 13697986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 24114154 - 24114244
Alignment:
Q  80 taggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||||||| ||||||||||||||||| |||| |  |||||||||||| |||||||| || ||||||||||||||||||||||    
T  24114154 taggggggattcgaagaatcctaaccgctgcttacttttcagataccaaaacaggtaaacttgctctgctgcaaacagataaaaattgcaa 24114244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 169
Target Start/End: Complemental strand, 24269824 - 24269735
Alignment:
Q  81 aggggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||  | || ||||||||||||||||| |||||||    
T  24269824 aggggggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaactactctgttgcaaacagataaagattgcaa 24269735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 218
Target Start/End: Complemental strand, 24645137 - 24644926
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    |||||||||  ||||| ||||||  |||| | ||||||||||||| |||||| ||||||||||||||| || ||||||||| |||| |||| |   ||||    
T  24645137 tcatcacttgtatagtatacttaagataactaaacgcgacatgaaagttatttaattccaacaaatgaata-gggggattcaaagattccttaaaactgc 24645039  T
Q  111 ttacatttctgcaacc-aaaacaggtaac-ttgctatgttgcaaacagat--aaaaattgcaatatctaactctcaaatcttttatttatattttgtt-c 205  Q
    |||| ||||||||||| |||||||||||| ||| ||||||||||| ||||  |||||||||||| |||| |  || | ||||||||||  ||||||||      
T  24645038 ttacttttctgcaaccaaaaacaggtaactttgttatgttgcaaatagataaaaaaattgcaatctctatccttcgactcttttattttaattttgttaa 24644939  T
Q  206 accaaataagtaa 218  Q
    |||||||||||||    
T  24644938 accaaataagtaa 24644926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 26394572 - 26394644
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaac 154  Q
    |||||||||||||| ||||||||| ||||||| |||||||||||||||||||| |||||||| ||||||||||    
T  26394572 gggggattcgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaacttgctttgttgcaaac 26394644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 29382234 - 29382322
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaac-aggta-acttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||| || ||||| |||||||| |||||||| |||||||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  29382234 ggggggtttgaagaatcctaaccactgcttacttttctgcaaccaaaaataggtacacttgctatgttgcaaacagataaaaattgcaa 29382322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 162
Target Start/End: Original strand, 24110469 - 24110623
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttattaatt--ccaacaa-atgattaggggggattcgaagagtcctaaccgct 108  Q
    |||||||||  ||||||||| ||  |||||| |||||||||| | ||||| | |||  ||||||| || |  |||||||||||||| | |||||||| ||    
T  24110469 tcatcacttgtatagtctacctaagataaataaacgcgacattactgttacttattatccaacaatataaacaggggggattcgaataatcctaacccct 24110568  T
Q  109 gcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaa 162  Q
    |||||| |||||||||||||||||| | ||||| || ||||||||||||||||||    
T  24110569 gcttacttttctgcaaccaaaacagataaacttcctctgttgcaaacagataaaa 24110623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 16404125 - 16404039
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaactt-gctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| ||||||||||||||||  |||||||| |||||| |||||| || ||| ||||||||||| |||||||||||||    
T  16404125 ggggattcgaagaatcctaaccgctgcttatttttctgcagccaaaataggtaaattcgctctgttgcaaacaaataaaaattgcaa 16404039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 18569262 - 18569193
Alignment:
Q  101 taaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||||||||| ||||||||||||||||| || |||| |||||||||||||||||||||||| ||||    
T  18569262 taaccgctgcttacttttctgcaaccaaaacaagtaaactcgctatgttgcaaacagataaaaatagcaa 18569193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 158
Target Start/End: Original strand, 5052729 - 5052875
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtt-attaattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    |||||||||||||||||||||||  |||| |||||| ||| ||| |||| |||||||||||||||||  ||  |||||||||||   | |||||||| ||    
T  5052729 tcatcacttagatagtctacttatgataattgaacgtgacttgactgttaattaattccaacaaatgtatataggggattcgaatgattctaaccgccgc 5052828  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagat 158  Q
    | ||| |||||||| ||||  ||  |||||||| ||||||||||||||    
T  5052829 taaca-ttctgcaatcaaacaagtaaacttgctctgttgcaaacagat 5052875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 18448412 - 18448502
Alignment:
Q  80 taggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||| ||||| | |||| || |||||| ||||||| ||| ||||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  18448412 taggagggatacaaagaatcataaccgttgcttacttttatgcaaccaaaaacaggtaacttgctctgttgcaaacagataaaaactgcaa 18448502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 169
Target Start/End: Original strand, 13314795 - 13314953
Alignment:
Q  14 atcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aat-tccaacaa-atgattaggggggattcgaagagtcctaaccgctgc 110  Q
    |||||||  ||||||||| ||  |||||| |||||||||||||||||||| ||| |||||||| || | ||||||  ||||||||| || |||||| |||    
T  13314795 atcacttgtatagtctacctaagataaataaacgcgacatgaatgttatttaatatccaacaatataaatagggg--attcgaagaatcttaaccgttgc 13314892  T
Q  111 ttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||| ||||||||||| ||||||||| || ||| |  |||||||||| |||||||||||||    
T  13314893 ttacttttctgcaaccaaaaacaggtaaatttgttcagttgcaaacatataaaaattgcaa 13314953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 169
Target Start/End: Original strand, 23893089 - 23893174
Alignment:
Q  85 gggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaactt-gctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||| |||| |||||||  ||  |||| |||||||||||||||||||||| || ||| |||||||||||||||||||||||||    
T  23893089 gggattcaaagaatcctaactactagttacttttctgcaaccaaaacaggtaaatttgctttgttgcaaacagataaaaattgcaa 23893174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 178
Target Start/End: Complemental strand, 19787020 - 19786861
Alignment:
Q  23 atagtctacttagaataaatgaacgcgacatgaatg-ttattaat-tccaacaaa-tgattaggggggattcgaagagtcctaaccgctgcttacatttc 119  Q
    |||||| |||||  |||| | ||||||||||||||| || ||||| ||||||||| | | || |||| |||| |||||||||||||  || || | ||||    
T  19787020 atagtcgacttaagataactaaacgcgacatgaatgctttttaatatccaacaaagtaaataaggggaattcaaagagtcctaaccattgtttccttttc 19786921  T
Q  120 tgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgcaatatctaact 178  Q
    | ||| ||||| || |||||||||| ||||||||||||||||||||| |||| |||||||    
T  19786920 tacaatcaaaaacatgtaacttgctctgttgcaaacagataaaaattacaatctctaact 19786861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 158
Target Start/End: Complemental strand, 15239093 - 15238948
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    |||||||||| ||||||| |||||||||  |||| | ||| ||| | ||||| ||||||||||||| | ||| |||||||| |||| ||||||||||  |    
T  15239093 tcatcacttaaatagtctgcttagaatat-tgaatgtgacttgactcttatttaattccaacaaataaatagaggggattcaaagaatcctaaccgcctc 15238995  T
Q  111 ttacatttctgcaaccaaaacaggtaac-ttgctatgttgcaaacagat 158  Q
      ||| |||||||| | ||||||||||| ||||||||||||||||||||    
T  15238994 gaaca-ttctgcaatc-aaacaggtaactttgctatgttgcaaacagat 15238948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 166
Target Start/End: Original strand, 17101779 - 17101863
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaa-cttgctatgttgcaaacagataaaaattg 166  Q
    ||||||| || || |||||||| |||||||| ||| ||||| ||||| ||||||| |||||| ||||||||||||||||||||||    
T  17101779 ggggatttgatgaatcctaaccactgcttacttttttgcaatcaaaaacaggtaaacttgctctgttgcaaacagataaaaattg 17101863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 6885155 - 6885096
Alignment:
Q  111 ttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||||||||||||||| |||||||||| || | || ||||||||||||||||||||    
T  6885155 ttacatttctgcaaccaaaaacaggtaacttactctattacaaacagataaaaattgcaa 6885096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 17976912 - 17976845
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtta-ttaattccaacaaatga 78  Q
    ||||||||||||||||||||||||||||| | ||   ||| ||| ||||| |||||||||||||||||    
T  17976912 tcatcacttagatagtctacttagaataacttaatatgacttgattgttagttaattccaacaaatga 17976845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 17509447 - 17509383
Alignment:
Q  106 gctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||| ||| |||||| ||||||||| |||||||| | |||||||||| | ||||||||||    
T  17509447 gctgcttacttttttgcaacaaaaacaggtaaacttgctctattgcaaacaggtgaaaattgcaa 17509383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 165
Target Start/End: Original strand, 89656 - 89809
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    |||||||||||||||||||||||  |||| | || ||||||||||||||||| ||||||||||||| | | |||| ||||  ||||||||||||||||||    
T  89656 tcatcacttagatagtctacttaagataactaaatgcgacatgaatgttatttaattccaacaaataaat-ggggtgatttaaagagtcctaaccgctgc 89754  T
Q  111 ttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaatt 165  Q
    |||  |||||||||||||||||||||||||| |  |||||||||||||| |||||    
T  89755 ttatttttctgcaaccaaaacaggtaacttgttcggttgcaaacagatagaaatt 89809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 194
Target Start/End: Complemental strand, 1025 - 843
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttatt-aattccaacaaa-tgattaggggggattcgaagagtcctaaccgctg 109  Q
    |||||||||  |||||||| |||  |||| | |||||||||||||||||||| |||||||||||| | | ||||||| |||| |||||||||||||||||    
T  1025 tcatcacttttatagtctaattaagataattaaacgcgacatgaatgttatttaattccaacaaaataaataggggg-attcaaagagtcctaaccgctg 927  T
Q  110 cttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttattt 194  Q
    ||||  ||||| |||||||| |||||| ||| || |||||||||||| ||||||||| ||| |||||| || || ||||||||||    
T  926 cttagttttctacaaccaaa-caggtatcttactctgttgcaaacaggtaaaaattgaaatctctaacccttaactcttttattt 843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 655 - 569
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaactt-gctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||| || ||| |||||||||||||||||||||||||    
T  655 ggggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaacaggtaaattcgctctgttgcaaacagataaaaattgcaa 569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 193
Target Start/End: Original strand, 2651 - 2801
Alignment:
Q  44 aacgcgacatgaatgttatt-aattccaacaaa-tgattaggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttg 141  Q
    |||||||| ||||||||||| |||||||||||| | | ||||| |||||||||||||| |||||| || |||| ||||| |||| ||| || ||||||||    
T  2651 aacgcgacctgaatgttatttaattccaacaaaataaatagggaggattcgaagagtcttaaccgttgtttacttttctacaac-aaaccatgtaacttg 2749  T
Q  142 ctatgttgcaaacagataaaaattgcaatatctaactctcaaatcttttatt 193  Q
    |||||||||||| | |||||||||||||| |||||| || || |||||||||    
T  2750 ctatgttgcaaataaataaaaattgcaatctctaacccttaactcttttatt 2801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 67 - 169
Target Start/End: Complemental strand, 35779 - 35677
Alignment:
Q  67 tccaacaaatgattaggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctatgttgcaaacagataaaaattg 166  Q
    |||||||||| | ||  ||||||| ||||| || |||||||||||||| |||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  35779 tccaacaaataaatataggggatttgaagaatcttaaccgctgcttacctttctgcaaccaaaacaggtaacttgctttgttgcagacaaataaaaattg 35680  T
Q  167 caa 169  Q
    |||    
T  35679 caa 35677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 35867 - 35954
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||| |||| ||||||||||||||||| ||||||||||||||| |||||||||| || |||| |||| |||||||||||||||    
T  35867 gggggattctaagaatcctaaccgctgcttacttttctgcaaccaaaatcaggtaactttctttgttccaaatagataaaaattgcaa 35954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 15871 - 15785
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| | ||||||||||||||| |||| |||||||||| ||||||||||||| |||||||||  ||||||||||||||    
T  15871 ggggattcgaagaatactaaccgctgcttacttttccgcaaccaaaaacaggtaacttgctctgttgcaaattgataaaaattgcaa 15785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 25199 - 25113
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||| ||||| ||||||||| ||||||| |||||||||||||||||||| |||||||| ||||||||| ||| |||||||||||    
T  25199 ggggatttgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaatagagaaaaattgcaa 25113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 21488 - 21403
Alignment:
Q  85 gggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||||||| |||||| |||| ||||| |||||| ||||||||||||| ||||| || ||||||||||| |||||||||||||    
T  21488 gggattcgaagaatcctaatcgctacttacttttctgaaaccaaaacaggtaaacttcctctgttgcaaacaaataaaaattgcaa 21403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 43100 - 43212
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctc 181  Q
    ||||||||| ||||||| ||||||||  ||   |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||     
T  43100 gggggattcaaagagtcttaaccgctattttgttttctgtaaccaaaaacaggtaacttgctctgttgcaaacagataaaaattgcaatctctaaccctt 43199  T
Q  182 aaatcttttattt 194  Q
    |  ||||||||||    
T  43200 atctcttttattt 43212  T

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Target: scaffold0005 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 168172 - 168284
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgcaatatctaactctc 181  Q
    ||||||||| |||||||||||||| || || | ||||| ||||||||| || |||||||||| |||||||||||||||||||||| ||| |||||| ||     
T  168172 gggggattcaaagagtcctaaccgttgtttccttttctacaaccaaaaacaagtaacttgctctgttgcaaacagataaaaattgaaatctctaaccctt 168271  T
Q  182 aaatcttttattt 194  Q
    |  ||||||||||    
T  168272 atgtcttttattt 168284  T

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Target: scaffold0008 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 177
Target Start/End: Complemental strand, 55160 - 54992
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgttattaatt--ccaacaa-atgattaggggggattcgaagagtcctaaccgct 108  Q
    |||||||||  ||||| ||||||| || | | |||||||||||||||||||| |||  |||| || || | ||||||| |||| |||||||||||||  |    
T  55160 tcatcacttgtatagtatacttaggatgactaaacgcgacatgaatgttatttattatccaataatataaataggggg-attcaaagagtcctaaccagt 55062  T
Q  109 gcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgcaatatctaac 177  Q
    | || | ||| ||||||||||| ||||||||||||||||| ||||||| |||||||||| ||| ||||||    
T  55061 gttttcttttgtgcaaccaaaaacaggtaacttgctatgtcgcaaacaaataaaaattggaatctctaac 54992  T

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Target: scaffold0638 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 696 - 784
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaattgcaat 170  Q
    |||| |||||||| || |||||||| ||||| ||||||||||| ||||||||| ||||| || ||||||||||||||||||||||||||    
T  696 gggggttcgaagaatcttaaccgcttcttacttttctgcaaccaaaaacaggtaaactttctctgttgcaaacagataaaaattgcaat 784  T

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Target: scaffold0002 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 177
Target Start/End: Complemental strand, 114710 - 114619
Alignment:
Q  87 gattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgcaatatctaac 177  Q
    ||||| |||||||||||||| || || | ||||||||||||||| ||||||| ||| | ||||||||||||||||||||| |||| ||||||    
T  114710 gattcaaagagtcctaaccgttgtttccttttctgcaaccaaaaacaggtaatttggtctgttgcaaacagataaaaattacaatctctaac 114619  T

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Target: scaffold1869 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 263 - 349
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| ||||||| |||||||| ||||||  |||| ||||||||| ||||||| | |||||| ||||||||||||||||    
T  263 ggggattcgaagaatcctaacggctgcttatatttctaaaaccaaaaacaggttacttgctctattgcaagcagataaaaattgcaa 349  T

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Target: scaffold0672 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 2028 - 1936
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtt-attaattccaacaaatgattaggggggattcgaagagtcctaa 103  Q
    |||||||||||||||||||||| |||||| |||||  ||| |||||||| |||||||||||||||| | ||  |||||||| |||| ||||||    
T  2028 tcatcacttagatagtctacttggaataattgaacttgacttgaatgttaattaattccaacaaattaataaaggggattcaaagaatcctaa 1936  T

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Target: scaffold0351 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 151 - 242
Alignment:
Q  87 gattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgcaatatctaac 177  Q
    ||||| |||||||||||||| || || | ||||||||||||||| | | ||| ||| | |||||||||||||||||||||||||| ||||||    
T  151 gattcaaagagtcctaaccgttgtttccttttctgcaaccaaaaaccgataatttggtttgttgcaaacagataaaaattgcaatctctaac 242  T

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Target: scaffold0351; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 5641 - 5731
Alignment:
Q  87 gattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgcaatatctaa 176  Q
    ||||| |||| ||||||||| || || | ||||| ||||||||| ||||||| ||| | | |||||||||||||||||||||||| |||||    
T  5641 gattcaaagaatcctaaccgttgtttccttttctacaaccaaaaacaggtaatttggtctattgcaaacagataaaaattgcaatctctaa 5731  T

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Target: scaffold0653 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 4288 - 4394
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtta-ttaattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    ||||| |||||||||||||||| ||| || | |||||||| ||| | ||| ||||||||| ||||| | |||||||||||| |||| ||||||| |||||    
T  4288 tcatcccttagatagtctacttcgaacaactaaacgcgacttgactattaattaattccagcaaataaataggggggattcaaagaatcctaactgctgc 4387  T
Q  111 ttacatt 117  Q
    | |||||    
T  4388 taacatt 4394  T

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Target: scaffold0111 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 3860 - 3772
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaac-aggtaa-cttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||| ||||| |||||||||| |||||| ||||||||| |||||  |||||| ||| ||||||||| | ||||||||||||||||    
T  3860 gggggattggaagaatcctaaccgcagcttacttttctgcaaacaaaaataggtaaactttctatgttgcgagcagataaaaattgcaa 3772  T

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Target: scaffold0838 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 2593 - 2515
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacattt-ctgcaaccaaaacaggtaacttgctatgttgcaaacagataaa 161  Q
    |||||||| |||||||||||||||||| |||| ||| || |||| ||| |||||||||| || |||||||||||||||||    
T  2593 gggggatttgaagagtcctaaccgctgtttactttttctacaacgaaa-caggtaactttctctgttgcaaacagataaa 2515  T

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Target: scaffold0832 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 2624 - 2546
Alignment:
Q  83 gggggattcgaagagtcctaaccgctgcttacattt-ctgcaaccaaaacaggtaacttgctatgttgcaaacagataaa 161  Q
    |||||||| |||||||||||||||||| |||| ||| || |||| ||| |||||||||| || |||||||||||||||||    
T  2624 gggggatttgaagagtcctaaccgctgtttactttttctacaacgaaa-caggtaactttctctgttgcaaacagataaa 2546  T

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Target: scaffold0238 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 19407 - 19300
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtta-ttaattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    |||||||||| ||||||||||||||| || | |||  ||| ||||||||| |||||| |||||||| | ||| |||||||| |||| || ||||||| ||    
T  19407 tcatcacttaaatagtctacttagaacaatttaacttgacttgaatgttatttaatttcaacaaataaatagaggggattcaaagaatcataaccgccgc 19308  T
Q  111 ttacattt 118  Q
    | ||||||    
T  19307 taacattt 19300  T

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Target: scaffold0054 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 72235 - 72148
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaac-caaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| |||| ||  |||||||| ||||||||||  |||| | || |||||||| |||||||||||||||||||||||||    
T  72235 ggggattcgaagaatccttactactgcttacttttctgcaactaaaaatacgtaaacttgctctgttgcaaacagataaaaattgcaa 72148  T

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Target: scaffold0035 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 70129 - 70050
Alignment:
Q  92 gaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaa-cttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||| ||||||| ||||||||| ||||| ||||||||| ||||||| |||||| | ||||||||| |||||||||||||    
T  70129 gaagaatcctaactgctgcttacttttctacaaccaaaaacaggtaaacttgctctattgcaaacaaataaaaattgcaa 70050  T

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Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 76629 - 76542
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| |||||| || ||||||| ||||| ||||| ||||||||| || ||||||||||| ||||| |||||| ||||||    
T  76629 ggggattcgaagaatcctaatcggtgcttacttttctacaaccaaaaacaggtaaatttgctatgttgtaaacatataaaatttgcaa 76542  T

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Target: scaffold0016 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 3744 - 3658
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaactt-gctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| ||||||| |||||||   ||||| ||| |||| ||||||| || ||| |||||||||||||| ||||||||||    
T  3744 ggggattcgaagaatcctaactgctgctttactttctccaatcaaagcaggtaaattcgctctgttgcaaacagatgaaaattgcaa 3658  T

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Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 18542 - 18607
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtta-ttaattccaacaaat 76  Q
    |||||||||| |||||||||||||||||| |||||  ||| ||||||||| |||||| ||||||||    
T  18542 tcatcacttaaatagtctacttagaataattgaacttgacgtgaatgttatttaatttcaacaaat 18607  T

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Target: scaffold0006; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 222835 - 222941
Alignment:
Q  12 tcatcacttagatagtctacttagaataaatgaacgcgacatgaatgtta-ttaattccaacaaatgattaggggggattcgaagagtcctaaccgctgc 110  Q
    |||||||||| |||||||||||||||||| |||||  ||| ||||| ||| |||||| |||||||| | ||| || | ||| |||| || ||||||| ||    
T  222835 tcatcacttaaatagtctacttagaataattgaacttgacgtgaattttatttaatttcaacaaataaatagaggaggttcaaagaatcataaccgccgc 222934  T
Q  111 ttacatt 117  Q
    | |||||    
T  222935 taacatt 222941  T

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Target: scaffold0957 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 3371 - 3283
Alignment:
Q  82 ggggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgcaa 169  Q
    |||||||||| || | || |||||||||||||| |||||  |||||||| ||||||| ||||| | || |||||| |||||||||||||    
T  3371 ggggggattcaaaaaatcataaccgctgcttacttttctataaccaaaaacaggtaaattgctctattacaaacaaataaaaattgcaa 3283  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 170
Target Start/End: Complemental strand, 69301 - 69217
Alignment:
Q  88 attcgaagagtcctaaccgctgcttacatttctgcaaccaa-aacaggtaa-cttgctatgttgcaaacagataaaaattgcaat 170  Q
    |||| |||| ||||||||||||||||  ||||||||   || ||||||||| ||| || ||||||||||||||||||||||||||    
T  69301 attctaagaatcctaaccgctgcttatttttctgcatgtaagaacaggtaaactttctctgttgcaaacagataaaaattgcaat 69217  T

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Target: scaffold0386 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 5979 - 6066
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggtaactt-gctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| |||| |||| | ||||| ||||| ||||| |||||| |||| || ||| | |||||||||||||||||||||||    
T  5979 ggggattcgaagaatcctgaccgttacttacttttctacaaccaaaaacaagtaaattcgctctattgcaaacagataaaaattgcaa 6066  T

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Target: scaffold0386; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 6589 - 6676
Alignment:
Q  84 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaacttg-ctatgttgcaaacagataaaaattgcaa 169  Q
    ||||||||||||| |||| |||||||||||| ||| || |||||||| || |||| ||  || | |||||||||||||||||||||||    
T  6589 ggggattcgaagaatcctgaccgctgcttacttttttgaaaccaaaaacaagtaaattcactctattgcaaacagataaaaattgcaa 6676  T

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