View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18810_high_15 (Length: 293)
Name: NF18810_high_15
Description: NF18810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18810_high_15 |
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Alignment Details
Target: chr7 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 19 - 283
Target Start/End: Complemental strand, 5967017 - 5966753
Alignment:
| Q |
19 |
gtgatatccatgtcgaattatggggtccaaggaatccattgtattaatccaaaccctaaggtgtgggagagaaatgtgtaaccataagggacatgggaac |
118 |
Q |
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| T |
5967017 |
gtgatatccatgttgaattatggggtccaaggaatccattgtattaatccaaaccctaaggtgtgggagagaaatgtgtaaccataagggacatgggaac |
5966918 |
T |
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| Q |
119 |
tttaaatatttcttgatagcattcactatggattctgtctaaaccatgtccctttatgactttaatctaaaaataccttaatagaccaaaacgcaaagct |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5966917 |
tttaaatatttcttgatagcattcactatggattctgtctaaaccatgtccctttatgactttaatctaaaaataccttaatagaccaaaacgcaaagct |
5966818 |
T |
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| Q |
219 |
gtagaacactaacaagacatgtaagcacgtgaaatgctcgtgagtggaaatggtttttgcctttg |
283 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
5966817 |
gtagaacactaacaagacatgtaaacacgtgaaatgctcgtgagtggaaatggtttttgcctttg |
5966753 |
T |
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