View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18810_low_5 (Length: 488)

Name: NF18810_low_5
Description: NF18810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18810_low_5
NF18810_low_5
[»] chr1 (74 HSPs)
chr1 (1-282)||(6770463-6770743)
chr1 (277-471)||(6770243-6770437)
chr1 (223-378)||(29210412-29210583)
chr1 (276-377)||(38162850-38162951)
chr1 (276-380)||(18043159-18043263)
chr1 (277-380)||(47009990-47010093)
chr1 (277-380)||(51065834-51065937)
chr1 (277-378)||(45431278-45431378)
chr1 (276-379)||(42770075-42770178)
chr1 (285-377)||(5694321-5694413)
chr1 (277-380)||(30657605-30657708)
chr1 (285-383)||(12072156-12072254)
chr1 (285-378)||(29657770-29657863)
chr1 (286-379)||(47532765-47532857)
chr1 (276-381)||(51368870-51368975)
chr1 (277-381)||(12306914-12307017)
chr1 (285-377)||(17333376-17333467)
chr1 (277-377)||(24178549-24178649)
chr1 (277-344)||(15282600-15282667)
chr1 (285-379)||(15227737-15227831)
chr1 (285-378)||(13961211-13961303)
chr1 (277-378)||(19031901-19032002)
chr1 (276-377)||(30294466-30294567)
chr1 (276-379)||(14350362-14350465)
chr1 (276-375)||(38702018-38702117)
chr1 (277-344)||(50128258-50128325)
chr1 (285-379)||(9266822-9266916)
chr1 (277-379)||(35985707-35985808)
chr1 (277-378)||(48071482-48071582)
chr1 (285-377)||(3784807-3784899)
chr1 (277-344)||(3097692-3097759)
chr1 (277-379)||(29683193-29683296)
chr1 (277-345)||(39497339-39497407)
chr1 (277-344)||(23473550-23473617)
chr1 (277-368)||(36446411-36446501)
chr1 (277-344)||(43286755-43286822)
chr1 (285-370)||(48383205-48383290)
chr1 (277-377)||(38335170-38335269)
chr1 (284-380)||(39912372-39912468)
chr1 (277-344)||(8473000-8473067)
chr1 (284-333)||(52431625-52431674)
chr1 (297-388)||(10976008-10976099)
chr1 (277-344)||(26228226-26228293)
chr1 (277-377)||(28481844-28481940)
chr1 (277-344)||(45449330-45449397)
chr1 (307-376)||(19011112-19011180)
chr1 (284-333)||(37315360-37315409)
chr1 (284-333)||(49867474-49867523)
chr1 (295-344)||(52749635-52749684)
chr1 (284-344)||(35700743-35700803)
chr1 (277-368)||(41730314-41730408)
chr1 (223-283)||(51368787-51368846)
chr1 (244-283)||(3784735-3784774)
chr1 (284-331)||(37503260-37503307)
chr1 (250-283)||(3097784-3097817)
chr1 (284-333)||(3838870-3838919)
chr1 (225-283)||(51065747-51065809)
chr1 (215-283)||(12072051-12072123)
chr1 (244-283)||(15227864-15227903)
chr1 (284-319)||(19011060-19011095)
chr1 (244-283)||(24178485-24178524)
chr1 (286-379)||(28725999-28726094)
chr1 (226-282)||(30657728-30657788)
chr1 (249-283)||(5694446-5694480)
chr1 (286-375)||(9413973-9414062)
chr1 (249-283)||(13961336-13961370)
chr1 (249-283)||(29657896-29657930)
chr1 (284-326)||(39081852-39081894)
chr1 (245-283)||(50128195-50128233)
chr1 (284-333)||(16590308-16590356)
chr1 (221-283)||(45449239-45449305)
chr1 (223-276)||(21112678-21112735)
chr1 (285-344)||(33644428-33644488)
chr1 (247-283)||(36446350-36446386)
[»] chr2 (55 HSPs)
chr2 (277-379)||(31390010-31390112)
chr2 (277-380)||(561604-561707)
chr2 (287-379)||(30486208-30486300)
chr2 (277-379)||(34442618-34442719)
chr2 (277-378)||(26891749-26891850)
chr2 (277-377)||(31438646-31438746)
chr2 (276-370)||(4381802-4381896)
chr2 (277-379)||(26387150-26387252)
chr2 (277-382)||(2898067-2898171)
chr2 (277-377)||(8969493-8969591)
chr2 (277-378)||(22887749-22887850)
chr2 (285-377)||(20552931-20553023)
chr2 (277-377)||(44587902-44588002)
chr2 (276-379)||(27856481-27856584)
chr2 (277-377)||(43637165-43637264)
chr2 (277-344)||(22567635-22567702)
chr2 (276-378)||(6580188-6580290)
chr2 (277-379)||(32860100-32860202)
chr2 (285-379)||(38590968-38591062)
chr2 (285-378)||(32360963-32361056)
chr2 (277-377)||(38296178-38296277)
chr2 (276-370)||(3668198-3668291)
chr2 (277-351)||(5093625-5093699)
chr2 (277-381)||(11021308-11021411)
chr2 (277-344)||(27584771-27584838)
chr2 (277-379)||(4022565-4022666)
chr2 (285-379)||(22068414-22068507)
chr2 (277-378)||(1859161-1859262)
chr2 (284-333)||(15079051-15079100)
chr2 (277-344)||(13574115-13574182)
chr2 (284-333)||(39531868-39531917)
chr2 (285-344)||(5881250-5881313)
chr2 (224-283)||(22068318-22068381)
chr2 (284-378)||(34123117-34123211)
chr2 (277-380)||(25782919-25783018)
chr2 (286-375)||(16807318-16807409)
chr2 (286-375)||(16846599-16846690)
chr2 (219-283)||(20553056-20553124)
chr2 (244-283)||(27856418-27856457)
chr2 (285-344)||(35851845-35851904)
chr2 (244-282)||(25782855-25782893)
chr2 (219-282)||(31438772-31438839)
chr2 (285-354)||(28600990-28601058)
chr2 (226-283)||(30486335-30486396)
chr2 (244-284)||(32860225-32860265)
chr2 (244-283)||(6580314-6580353)
chr2 (277-344)||(29102369-29102436)
chr2 (290-333)||(30217662-30217705)
chr2 (244-282)||(4022501-4022539)
chr2 (253-283)||(13574060-13574090)
chr2 (277-350)||(25772137-25772211)
chr2 (249-283)||(26387091-26387125)
chr2 (249-283)||(34442559-34442593)
chr2 (347-388)||(35851925-35851966)
chr2 (226-283)||(32360869-32360930)
[»] chr8 (62 HSPs)
chr8 (276-380)||(168463-168567)
chr8 (277-379)||(27988585-27988687)
chr8 (277-379)||(28045887-28045989)
chr8 (276-377)||(30675657-30675758)
chr8 (277-378)||(43119216-43119317)
chr8 (276-379)||(4648193-4648295)
chr8 (277-384)||(13643005-13643112)
chr8 (277-384)||(13743430-13743537)
chr8 (277-387)||(16785077-16785186)
chr8 (277-379)||(33357215-33357317)
chr8 (277-378)||(11112638-11112739)
chr8 (277-368)||(29444226-29444317)
chr8 (277-364)||(42035067-42035154)
chr8 (285-379)||(4537838-4537932)
chr8 (285-377)||(34228682-34228774)
chr8 (277-344)||(7304604-7304671)
chr8 (277-376)||(16888630-16888728)
chr8 (277-379)||(9278210-9278312)
chr8 (277-375)||(20831639-20831737)
chr8 (277-350)||(36730471-36730544)
chr8 (285-377)||(16394155-16394247)
chr8 (276-376)||(21595848-21595947)
chr8 (277-379)||(9063138-9063239)
chr8 (285-379)||(10618016-10618110)
chr8 (285-354)||(16890574-16890643)
chr8 (277-370)||(32113915-32114008)
chr8 (285-377)||(37373206-37373297)
chr8 (277-344)||(9537910-9537977)
chr8 (277-344)||(28626801-28626868)
chr8 (277-344)||(40831310-40831377)
chr8 (287-377)||(2805356-2805446)
chr8 (276-378)||(12203854-12203955)
chr8 (276-378)||(12448282-12448383)
chr8 (286-356)||(9253996-9254066)
chr8 (277-343)||(34192809-34192875)
chr8 (285-378)||(3930327-3930419)
chr8 (300-377)||(12652630-12652707)
chr8 (277-377)||(29235235-29235335)
chr8 (277-344)||(10870385-10870452)
chr8 (226-283)||(9537824-9537885)
chr8 (310-369)||(36923782-36923841)
chr8 (285-379)||(17467601-17467695)
chr8 (284-333)||(42433636-42433685)
chr8 (284-327)||(22451834-22451877)
chr8 (225-283)||(29444139-29444201)
chr8 (225-282)||(3930232-3930293)
chr8 (224-283)||(27988498-27988560)
chr8 (224-283)||(28045800-28045862)
chr8 (226-283)||(34228807-34228868)
chr8 (244-283)||(2805282-2805321)
chr8 (244-279)||(21595975-21596010)
chr8 (284-323)||(30933414-30933453)
chr8 (285-381)||(4811553-4811651)
chr8 (244-282)||(12203980-12204018)
chr8 (244-282)||(12448408-12448446)
chr8 (284-333)||(16196897-16196947)
chr8 (244-282)||(29235361-29235399)
chr8 (225-283)||(4537743-4537805)
chr8 (317-377)||(39751597-39751658)
chr8 (222-283)||(168591-168656)
chr8 (246-282)||(28626894-28626930)
chr8 (285-333)||(34890652-34890700)
[»] chr4 (57 HSPs)
chr4 (276-383)||(4089136-4089243)
chr4 (276-379)||(43944505-43944608)
chr4 (276-384)||(16536041-16536149)
chr4 (276-380)||(789615-789719)
chr4 (276-380)||(7768935-7769039)
chr4 (276-380)||(15186240-15186344)
chr4 (276-379)||(43202468-43202571)
chr4 (277-378)||(55882683-55882783)
chr4 (277-377)||(24679728-24679827)
chr4 (277-377)||(32217045-32217145)
chr4 (277-377)||(54897308-54897408)
chr4 (284-383)||(18067972-18068071)
chr4 (276-378)||(4268907-4269009)
chr4 (277-378)||(49915158-49915259)
chr4 (277-370)||(50619093-50619186)
chr4 (277-377)||(4220195-4220295)
chr4 (277-380)||(29591186-29591289)
chr4 (277-384)||(42898832-42898939)
chr4 (277-354)||(54655962-54656039)
chr4 (277-354)||(54945864-54945941)
chr4 (285-377)||(28755621-28755712)
chr4 (277-377)||(32202566-32202666)
chr4 (276-344)||(37987968-37988036)
chr4 (277-356)||(30154249-30154327)
chr4 (277-380)||(6164091-6164193)
chr4 (277-376)||(19503191-19503289)
chr4 (277-379)||(46688291-46688398)
chr4 (285-380)||(47231966-47232061)
chr4 (277-344)||(53655964-53656031)
chr4 (285-379)||(33108767-33108860)
chr4 (285-387)||(52533879-52533981)
chr4 (277-338)||(36395138-36395199)
chr4 (285-377)||(3783595-3783687)
chr4 (244-377)||(54054548-54054693)
chr4 (277-344)||(39843940-39844007)
chr4 (277-344)||(42815142-42815209)
chr4 (284-378)||(50167590-50167682)
chr4 (277-379)||(5091696-5091798)
chr4 (277-379)||(12356242-12356344)
chr4 (284-381)||(41265455-41265552)
chr4 (277-326)||(30387220-30387269)
chr4 (277-344)||(31680549-31680616)
chr4 (277-379)||(46148939-46149039)
chr4 (224-283)||(16820977-16821040)
chr4 (226-283)||(54897433-54897494)
chr4 (277-313)||(39877335-39877371)
chr4 (276-332)||(50603272-50603328)
chr4 (308-344)||(52697085-52697121)
chr4 (215-283)||(29591314-29591386)
chr4 (336-378)||(10110147-10110189)
chr4 (249-283)||(50619211-50619245)
chr4 (284-326)||(53268771-53268813)
chr4 (250-283)||(789558-789591)
chr4 (249-282)||(36395225-36395258)
chr4 (308-344)||(1432659-1432695)
chr4 (226-283)||(4268822-4268883)
chr4 (285-325)||(31517217-31517257)
[»] chr6 (44 HSPs)
chr6 (276-390)||(12525706-12525820)
chr6 (276-384)||(3515759-3515867)
chr6 (277-375)||(2350654-2350752)
chr6 (276-377)||(392096-392197)
chr6 (277-377)||(23629662-23629761)
chr6 (277-379)||(1391264-1391365)
chr6 (277-379)||(7851245-7851347)
chr6 (285-379)||(20897946-20898040)
chr6 (277-379)||(23402136-23402238)
chr6 (277-377)||(12145203-12145303)
chr6 (284-383)||(27433486-27433585)
chr6 (277-379)||(34396613-34396715)
chr6 (276-353)||(13417047-13417124)
chr6 (277-382)||(32929594-32929699)
chr6 (278-378)||(13529454-13529554)
chr6 (277-377)||(21878433-21878533)
chr6 (276-379)||(4215693-4215796)
chr6 (277-367)||(32985279-32985369)
chr6 (277-378)||(29451201-29451301)
chr6 (277-377)||(29978233-29978332)
chr6 (277-380)||(18276701-18276803)
chr6 (277-344)||(26467210-26467277)
chr6 (276-378)||(31280320-31280422)
chr6 (285-353)||(34477644-34477712)
chr6 (277-344)||(25165499-25165566)
chr6 (277-377)||(28225221-28225320)
chr6 (276-382)||(3026094-3026198)
chr6 (277-344)||(34851935-34852002)
chr6 (277-377)||(2580952-2581052)
chr6 (276-344)||(11115180-11115248)
chr6 (284-375)||(9660988-9661079)
chr6 (277-377)||(35043890-35043989)
chr6 (277-344)||(1840333-1840400)
chr6 (285-335)||(961051-961101)
chr6 (307-379)||(14559920-14559992)
chr6 (244-283)||(4215820-4215859)
chr6 (277-351)||(5323426-5323500)
chr6 (216-283)||(32929498-32929569)
chr6 (248-282)||(1391204-1391238)
chr6 (244-282)||(32985215-32985253)
chr6 (225-283)||(392221-392283)
chr6 (249-282)||(12145144-12145177)
chr6 (225-283)||(23402263-23402325)
chr6 (336-377)||(34712271-34712312)
[»] chr3 (59 HSPs)
chr3 (277-378)||(272219-272320)
chr3 (276-381)||(52520677-52520782)
chr3 (277-377)||(4168183-4168283)
chr3 (287-380)||(18014669-18014762)
chr3 (276-377)||(39074419-39074520)
chr3 (276-377)||(43786871-43786972)
chr3 (285-380)||(46352631-46352726)
chr3 (285-379)||(40362674-40362768)
chr3 (276-377)||(20923992-20924093)
chr3 (277-378)||(49893330-49893431)
chr3 (285-379)||(858587-858681)
chr3 (285-377)||(48725271-48725363)
chr3 (277-377)||(52246582-52246682)
chr3 (277-370)||(41554026-41554118)
chr3 (285-353)||(22248910-22248978)
chr3 (295-378)||(41304004-41304087)
chr3 (277-368)||(42964335-42964426)
chr3 (276-384)||(53489909-53490019)
chr3 (285-379)||(13159895-13159989)
chr3 (285-370)||(50395656-50395741)
chr3 (277-377)||(10617370-10617469)
chr3 (277-356)||(49529352-49529434)
chr3 (277-368)||(43269825-43269916)
chr3 (285-379)||(11308304-11308398)
chr3 (277-339)||(31514829-31514891)
chr3 (277-354)||(29241660-29241737)
chr3 (277-377)||(2119431-2119531)
chr3 (277-344)||(7468444-7468511)
chr3 (277-377)||(28139309-28139409)
chr3 (277-377)||(42548096-42548195)
chr3 (277-345)||(50299031-50299099)
chr3 (297-377)||(51818981-51819061)
chr3 (285-344)||(2505382-2505441)
chr3 (277-344)||(2938126-2938193)
chr3 (277-370)||(50359272-50359364)
chr3 (277-344)||(41993705-41993772)
chr3 (296-354)||(2391630-2391688)
chr3 (296-354)||(2393391-2393449)
chr3 (277-325)||(33140937-33140985)
chr3 (277-344)||(38852247-38852317)
chr3 (292-344)||(52718200-52718252)
chr3 (225-283)||(39074543-39074605)
chr3 (244-283)||(858714-858753)
chr3 (277-320)||(6842676-6842719)
chr3 (252-283)||(41304128-41304159)
chr3 (244-283)||(48725396-48725435)
chr3 (278-316)||(6842604-6842642)
chr3 (224-275)||(11308209-11308264)
chr3 (244-282)||(18014798-18014836)
chr3 (249-283)||(42548220-42548254)
chr3 (249-283)||(49529293-49529327)
chr3 (249-283)||(52246708-52246742)
chr3 (285-354)||(24488389-24488458)
chr3 (250-283)||(25743934-25743967)
chr3 (225-283)||(40362579-40362641)
chr3 (317-377)||(2362801-2362861)
chr3 (226-283)||(10617284-10617345)
chr3 (286-333)||(13898986-13899034)
chr3 (226-283)||(46352759-46352820)
[»] scaffold0524 (1 HSPs)
scaffold0524 (277-377)||(825-925)
[»] chr5 (34 HSPs)
chr5 (277-377)||(6283562-6283662)
chr5 (285-383)||(13661802-13661900)
chr5 (277-381)||(35132518-35132622)
chr5 (277-376)||(2619643-2619742)
chr5 (286-377)||(10069969-10070060)
chr5 (276-377)||(35504325-35504426)
chr5 (276-388)||(34650918-34651029)
chr5 (276-379)||(10054437-10054540)
chr5 (276-386)||(12506287-12506397)
chr5 (276-379)||(8787337-8787440)
chr5 (277-380)||(13470148-13470251)
chr5 (285-379)||(19647752-19647846)
chr5 (277-383)||(40564490-40564594)
chr5 (277-379)||(4837256-4837357)
chr5 (285-377)||(11958061-11958153)
chr5 (277-344)||(21547480-21547547)
chr5 (277-370)||(11846079-11846172)
chr5 (277-381)||(31909628-31909731)
chr5 (277-376)||(20175228-20175327)
chr5 (288-379)||(39069379-39069469)
chr5 (277-345)||(40057339-40057407)
chr5 (277-344)||(9721693-9721760)
chr5 (284-344)||(6284828-6284888)
chr5 (284-344)||(19436929-19436989)
chr5 (219-283)||(34650826-34650894)
chr5 (317-380)||(21944986-21945050)
chr5 (277-344)||(39067021-39067089)
chr5 (284-378)||(10955950-10956044)
chr5 (215-283)||(13661933-13662005)
chr5 (244-282)||(31909752-31909790)
chr5 (250-283)||(10956076-10956109)
chr5 (225-283)||(11957966-11958028)
chr5 (225-281)||(35504240-35504299)
chr5 (244-280)||(10955973-10956009)
[»] chr7 (58 HSPs)
chr7 (277-380)||(29993573-29993676)
chr7 (276-379)||(34333282-34333385)
chr7 (277-376)||(47656981-47657080)
chr7 (276-378)||(5239284-5239386)
chr7 (277-379)||(12218522-12218624)
chr7 (277-379)||(18485959-18486061)
chr7 (276-377)||(24438477-24438578)
chr7 (277-377)||(34606261-34606361)
chr7 (277-379)||(24798489-24798590)
chr7 (277-376)||(28587911-28588009)
chr7 (277-356)||(30810676-30810755)
chr7 (277-377)||(8754671-8754771)
chr7 (284-380)||(34546407-34546503)
chr7 (277-380)||(4628563-4628666)
chr7 (277-384)||(7689286-7689393)
chr7 (277-370)||(11686410-11686503)
chr7 (277-378)||(27456199-27456299)
chr7 (285-377)||(1736980-1737072)
chr7 (277-344)||(18117176-18117243)
chr7 (285-344)||(47083088-47083147)
chr7 (277-378)||(47839492-47839592)
chr7 (277-377)||(43594122-43594222)
chr7 (277-344)||(13064963-13065030)
chr7 (277-344)||(23363253-23363320)
chr7 (285-379)||(5729344-5729438)
chr7 (277-350)||(33636479-33636552)
chr7 (277-378)||(37631628-37631729)
chr7 (284-344)||(18220531-18220591)
chr7 (276-344)||(45045803-45045871)
chr7 (277-344)||(525161-525228)
chr7 (277-344)||(29835790-29835857)
chr7 (279-344)||(4100612-4100677)
chr7 (280-333)||(18220620-18220673)
chr7 (285-370)||(28262038-28262118)
chr7 (277-326)||(37674190-37674239)
chr7 (276-337)||(42044378-42044439)
chr7 (284-377)||(18470032-18470126)
chr7 (284-333)||(18220763-18220812)
chr7 (284-332)||(22739868-22739916)
chr7 (307-378)||(23357823-23357894)
chr7 (244-283)||(29993509-29993548)
chr7 (308-382)||(22973593-22973667)
chr7 (284-333)||(4087667-4087716)
chr7 (284-344)||(3021924-3021984)
chr7 (226-283)||(24438602-24438663)
chr7 (277-344)||(46716671-46716738)
chr7 (322-377)||(47118095-47118150)
chr7 (249-283)||(4628691-4628725)
chr7 (249-283)||(13064903-13064937)
chr7 (249-283)||(18117268-18117302)
chr7 (224-283)||(34606386-34606449)
chr7 (286-331)||(38022586-38022632)
chr7 (244-282)||(45045896-45045934)
chr7 (254-283)||(8754617-8754646)
chr7 (225-271)||(37674105-37674153)
chr7 (223-283)||(42044291-42044354)
chr7 (336-368)||(19434502-19434534)
chr7 (284-344)||(36437410-36437470)
[»] scaffold0045 (2 HSPs)
scaffold0045 (277-377)||(50548-50648)
scaffold0045 (277-344)||(53432-53499)
[»] scaffold0003 (1 HSPs)
scaffold0003 (284-383)||(53778-53877)
[»] scaffold0264 (1 HSPs)
scaffold0264 (277-379)||(22959-23061)
[»] scaffold0021 (1 HSPs)
scaffold0021 (285-379)||(116202-116296)
[»] scaffold0188 (1 HSPs)
scaffold0188 (277-376)||(6196-6295)
[»] scaffold0014 (2 HSPs)
scaffold0014 (277-379)||(68376-68478)
scaffold0014 (250-283)||(68318-68351)
[»] scaffold0002 (1 HSPs)
scaffold0002 (285-379)||(146999-147093)
[»] scaffold1266 (1 HSPs)
scaffold1266 (277-378)||(292-392)
[»] scaffold0674 (1 HSPs)
scaffold0674 (285-353)||(7991-8059)
[»] scaffold0549 (1 HSPs)
scaffold0549 (285-353)||(7312-7380)
[»] scaffold1152 (1 HSPs)
scaffold1152 (277-378)||(677-778)
[»] scaffold0190 (2 HSPs)
scaffold0190 (277-377)||(14896-14996)
scaffold0190 (244-283)||(15021-15060)
[»] scaffold0038 (1 HSPs)
scaffold0038 (277-377)||(25719-25818)
[»] scaffold0034 (1 HSPs)
scaffold0034 (277-379)||(95670-95772)
[»] scaffold0206 (1 HSPs)
scaffold0206 (287-344)||(11066-11123)
[»] scaffold0533 (1 HSPs)
scaffold0533 (284-344)||(5072-5132)
[»] scaffold0050 (2 HSPs)
scaffold0050 (277-353)||(69250-69326)
scaffold0050 (284-344)||(33774-33834)
[»] scaffold0325 (1 HSPs)
scaffold0325 (277-340)||(17557-17619)
[»] scaffold0113 (2 HSPs)
scaffold0113 (279-363)||(40933-41017)
scaffold0113 (244-282)||(41045-41083)
[»] scaffold0263 (1 HSPs)
scaffold0263 (277-344)||(19671-19738)
[»] scaffold0015 (1 HSPs)
scaffold0015 (285-345)||(74567-74628)
[»] scaffold0425 (1 HSPs)
scaffold0425 (277-316)||(10771-10810)
[»] scaffold1128 (1 HSPs)
scaffold1128 (286-326)||(1422-1462)


Alignment Details
Target: chr1 (Bit Score: 250; Significance: 1e-139; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 282
Target Start/End: Complemental strand, 6770743 - 6770463
Alignment:
Q  1 ttcatgtgtgtgtttatattaaccgcaattttaataaattgtgtttaatgcatgcatttctgaagtttaaatattcataatattcattaaccacgatttg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6770743 ttcatgtgtgtgtttatattaaccgcaattttaataaattgtgtttaatgcatgcatttctgaagtttaaatattcataatattcattaaccacggtttg 6770644  T
Q  101 atttcaaattgaaaatcgtggttgatacattcaaaattatgttgagtgaatgattaatgaattgcaacacctattatgtgtgatcaattagctatatatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  6770643 atttcaaattgaaaatcgtggttgatacattcaaaattatgttgagtgaatgattaatgaa-tgtaacacctattatgtgtgatcaattagctatatatt 6770545  T
Q  201 taaattgaatttactatttaaattagggtcctgctaatcggtgcgggacactggttaagcataccataaaaggaaattatta 282  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||| ||||||||    
T  6770544 taaattgaatttactatttaaattagggtcctgctaaccggtgcgggatactggttaagcatatcataaaagggaattatta 6770463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 277 - 471
Target Start/End: Complemental strand, 6770437 - 6770243
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6770437 ttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaattagtgccccggaggcaccggttagccattcc 6770338  T
Q  377 ctttaaattattgtcgaactttaatatcaaattaaactatcatttcccttttatttaattgataccaattttcatcccttgcttgtgaagagctt 471  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6770337 ctttaaattattgtcgaactttaatatcaaattaaactatcatttcccttttatttaattgataccaattttcatcccttgcttgtgaagagctt 6770243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 223 - 378
Target Start/End: Complemental strand, 29210583 - 29210412
Alignment:
Q  223 ttagggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaa------------ttattacaaattaattacacaatttcaata 306  Q
    ||||||||||||||| ||||||    ||| ||||||||||||||||||||||||||||            |||||| ||||||||||||||||||||||     
T  29210583 ttagggtcctgctaaccggtgcccccggggcactggttaagcataccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatg 29210484  T
Q  307 cattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 378  Q
    |||||||||||||||||||| |||||||||| ||||||  |||||||||||||||||||||||| |||||||    
T  29210483 cattaactactatataatttcctttttcatacccttaaccagtgccccggaggcaccggttagcatttccct 29210412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 276 - 377
Target Start/End: Complemental strand, 38162951 - 38162850
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||| | ||||    
T  38162951 attattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgccccggaggcaccggttaacatttc 38162852  T
Q  376 cc 377  Q
    ||    
T  38162851 cc 38162850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 276 - 380
Target Start/End: Complemental strand, 18043263 - 18043159
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||| ||| ||||||  |||||||||||||||||||||||| ||||    
T  18043263 attattataaattaattacacaatttcaatgcattaactactatataatttccttttttatacccttaaccagtgccccggaggcaccggttagcatttc 18043164  T
Q  376 ccttt 380  Q
    |||||    
T  18043163 ccttt 18043159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 277 - 380
Target Start/End: Complemental strand, 47010093 - 47009990
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||| ||||| |||||| ||||| |||||    
T  47010093 ttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaaccagtgctccggatgcaccgattagcatttcc 47009994  T
Q  377 cttt 380  Q
    ||||    
T  47009993 cttt 47009990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 277 - 380
Target Start/End: Original strand, 51065834 - 51065937
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||| ||||| | ||||||||||| |||||    
T  51065834 ttattataaattaattacacaatttcaatacattaactactatataatttactttttcatatccttaaccagtgtcccggggacaccggttagcatttcc 51065933  T
Q  377 cttt 380  Q
    ||||    
T  51065934 cttt 51065937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 277 - 378
Target Start/End: Complemental strand, 45431378 - 45431278
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||| || ||||||||||||| |||||    
T  45431378 ttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaatcag-gccctgggggcaccggttagcatttcc 45431280  T
Q  377 ct 378  Q
    ||    
T  45431279 ct 45431278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 276 - 379
Target Start/End: Original strand, 42770075 - 42770178
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||| | ||||  |||||||||| ||||||||||||| ||||    
T  42770075 attattataaattaattacacaatttcaatgcattaactactatataatttcctttttcataccattaaccagtgccccgggggcaccggttagcatttc 42770174  T
Q  376 cctt 379  Q
    ||||    
T  42770175 cctt 42770178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 285 - 377
Target Start/End: Complemental strand, 5694413 - 5694321
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 377  Q
    ||||||||||||||||||||| |||||||||||||||||||| | |||| ||||||||||  |||||||||||||||||||||||| ||||||    
T  5694413 aattaattacacaatttcaatgcattaactactatataatttccctttttatatccttaaccagtgccccggaggcaccggttagcatttccc 5694321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 277 - 380
Target Start/End: Complemental strand, 30657708 - 30657605
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||| ||||||||| ||||||||||||||||||||  |||||||||| ||||| |||||||||||  |||||||||||| |||||    
T  30657708 ttattataaattaattacataatttcaatgcattaactactatataatttcttttttcatatgcttaactagtgccccgggagcaccggttagcatttcc 30657609  T
Q  377 cttt 380  Q
    ||||    
T  30657608 cttt 30657605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 285 - 383
Target Start/End: Original strand, 12072156 - 12072254
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaa 383  Q
    ||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||   ||||||||| ||||||||||||| ||| ||||||||    
T  12072156 aattaattacacaatttcaatgcattaactactacataatttcctttttcatatccttaaccggtgccccgggggcaccggttagcattttcctttaaa 12072254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 285 - 378
Target Start/End: Complemental strand, 29657863 - 29657770
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 378  Q
    ||||||||| ||||||||||| |||||||||||||||||||| |||||| ||||||||||  |||||||||| ||||||||||||| |||||||    
T  29657863 aattaattatacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtgccccgggggcaccggttagcatttccct 29657770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 379
Target Start/End: Original strand, 47532765 - 47532857
Alignment:
Q  286 attaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 379  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||| | |||||| ||||||||||| ||||||||    
T  47532765 attaattacacaatttcaatgcattaactactatataattttctttttcatatccttaa-cagtactccggagacaccggttagcatttccctt 47532857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 276 - 381
Target Start/End: Original strand, 51368870 - 51368975
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| ||||||| |||||||||||||| |||||||||||||||||||| |||||||||| ||||||  ||| ||| ||||| |||||||||| ||||    
T  51368870 attattataaattaactacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtaccctggaggtaccggttagcatttc 51368969  T
Q  376 ccttta 381  Q
    ||||||    
T  51368970 ccttta 51368975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 277 - 381
Target Start/End: Complemental strand, 12307017 - 12306914
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||||||||||||  ||||||||| ||||||||||||||||| |||| |||| ||| ||||| ||||||||||||||| |||||    
T  12307017 ttattataaattaattacacaatttcaatgtattaactac-atataattttctttttcgtatcattaactagagccccagaggcaccggttagcatttcc 12306919  T
Q  377 cttta 381  Q
    |||||    
T  12306918 cttta 12306914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 285 - 377
Target Start/End: Original strand, 17333376 - 17333467
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 377  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  |||| ||||| ||||||||||||| ||||||    
T  17333376 aattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg-cccgggggcaccggttagcatttccc 17333467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 277 - 377
Target Start/End: Original strand, 24178549 - 24178649
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| | |||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||  |||||||||| |||| |||||||| |||||    
T  24178549 ttattatagattaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgccccgggggcatcggttagcatttcc 24178648  T
Q  377 c 377  Q
    |    
T  24178649 c 24178649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 15282600 - 15282667
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15282600 ttattataaattaattacacaatttcaatatattaactactatataattttctttttcatatccttaa 15282667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 285 - 379
Target Start/End: Complemental strand, 15227831 - 15227737
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 379  Q
    ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||  |||||||| | || |||||||||| ||||||||    
T  15227831 aattaattacacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgcccccggggtaccggttagcatttccctt 15227737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 285 - 378
Target Start/End: Complemental strand, 13961303 - 13961211
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 378  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||   ||||||||| ||||||||||||| |||||||    
T  13961303 aattaattacacaatttcaatgcattaactactatataatttt-ttttttatatccttaacccgtgccccgggggcaccggttagcatttccct 13961211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 378
Target Start/End: Original strand, 19031901 - 19032002
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||||||||||||   |||||||||||||||||| ||||||||||||||||| || |||||| |  |||||||||||| |||||    
T  19031901 ttattataaattaattacacaatttcaatgttttaactactatataatttcctttttcatatccttaactaatgcccccggagcaccggttagcatttcc 19032000  T
Q  377 ct 378  Q
    ||    
T  19032001 ct 19032002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 276 - 377
Target Start/End: Original strand, 30294466 - 30294567
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  | ||| |||| | ||||| ||||| ||||    
T  30294466 attattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccaatgctccggggacaccgattagcatttc 30294565  T
Q  376 cc 377  Q
    ||    
T  30294566 cc 30294567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 276 - 379
Target Start/End: Original strand, 14350362 - 14350465
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||| ||| |||||||||| ||||||||| |||||||||| ||||||   |||| |||| ||||||||||||| ||||    
T  14350362 attattataaattaattacacaattttaatgcattaactacaatataatttcctttttcatacccttaaccggtgctccgggggcaccggttagcatttc 14350461  T
Q  376 cctt 379  Q
    ||||    
T  14350462 cctt 14350465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 276 - 375
Target Start/End: Original strand, 38702018 - 38702117
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||||| ||| |||||||||| ||||||  ||||||||||  |||||||||||| ||||    
T  38702018 attattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccccgggagcaccggttagcatttc 38702117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 50128258 - 50128325
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  50128258 ttattataaattaattacacaatttcaatgcattaactactatgtaattttctttttcatatccttaa 50128325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 285 - 379
Target Start/End: Original strand, 9266822 - 9266916
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 379  Q
    ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||  |||||| ||| | ||||||||| | ||||||||    
T  9266822 aattaattacacaatttcaatgcattaaatactatataatttcctttttcatatccttaaccagtgccgcggggacaccggttaacatttccctt 9266916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 277 - 379
Target Start/End: Original strand, 35985707 - 35985808
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||  ||||  |||| ||||||||||| | |||||    
T  35985707 ttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaacagtgatccgg-ggcaccggttaacatttcc 35985805  T
Q  377 ctt 379  Q
    |||    
T  35985806 ctt 35985808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 277 - 378
Target Start/End: Complemental strand, 48071582 - 48071482
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| ||||||||| |||||||||| ||||| |||||||||||  ||| ||||||| ||| |||||||| |||||    
T  48071582 ttattataaattaattacacaatttcaatgcattaactattatataatttccttttacatatccttaaccagtaccccgga-gcatcggttagcatttcc 48071484  T
Q  377 ct 378  Q
    ||    
T  48071483 ct 48071482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 285 - 377
Target Start/End: Original strand, 3784807 - 3784899
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 377  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  ||||| | || ||||||| || || ||||||    
T  3784807 aattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcactgggggcaccgatttgcatttccc 3784899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 3097759 - 3097692
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||    
T  3097759 ttattataaattaattacataatttcaatgcattaactactatataatttcctttttcatatccttaa 3097692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 379
Target Start/End: Complemental strand, 29683296 - 29683193
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttc-tttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    |||||| |||||||||| || |||||||| |||||||||||||||||||| | ||||| ||||| ||||  |||||||||| ||||||||||||| ||||    
T  29683296 ttattataaattaattatacgatttcaatgcattaactactatataatttcctttttttatatctttaaccagtgccccgggggcaccggttagcatttc 29683197  T
Q  376 cctt 379  Q
    ||||    
T  29683196 cctt 29683193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 39497407 - 39497339
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaat 345  Q
    |||||| |||||||||| | ||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  39497407 ttattataaattaattatataattttaatgcattaactactatataattttctttttcatatccttaat 39497339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 23473550 - 23473617
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||| |||||||||||||||||||| ||||||||| | |||||||||||||||||    
T  23473550 ttattataaattaattatacaatttcaatacattaactgctatataatctcctttttcatatccttaa 23473617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 277 - 368
Target Start/End: Original strand, 36446411 - 36446501
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggtta 368  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||| |||| |||||  |||||| ||| |||||| ||||    
T  36446411 ttattataaattaattacacaatttcaatgcattaactactatataatttccttttt-atattcttaaccagtgcctcgggggcaccagtta 36446501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 43286822 - 43286755
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||||| |||||||| |||||||||| |||||||||| |||||||||||||||||    
T  43286822 ttattataaattaattacataatttcaaaacattaactattatataatttcctttttcatatccttaa 43286755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 285 - 370
Target Start/End: Original strand, 48383205 - 48383290
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagc 370  Q
    |||||||||||  |||||||||||||||||   |||||||||||||||||| ||||||||  ||||||||||  ||||||||||||    
T  48383205 aattaattacattatttcaatacattaactttcatataattttctttttcacatccttaaccagtgccccgggagcaccggttagc 48383290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 38335269 - 38335170
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||||||| |||| |||||| ||||||||||||| |||||||||||| ||||  |||| |||  || ||||||||||| |||||    
T  38335269 ttattataaattaattacacaattacaatgcattaattactatataatttcctttttcatatctttaaccagtgtccc-aagacaccggttagcatttcc 38335171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 380
Target Start/End: Original strand, 39912372 - 39912468
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttt 380  Q
    |||||||| ||||||||||||| ||||||||| |||||||||| | |||| ||||||||||| |||||||||   || ||||||| | |||||||||    
T  39912372 aaattaatcacacaatttcaatgcattaactagtatataatttccctttttatatccttaatcagtgccccgagtgcgccggttaacatttcccttt 39912468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 8473000 - 8473067
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||||||||||| ||| ||||||||| |||||||||| |||||| ||||||||||    
T  8473000 ttattataaattaattacacaattttaatgcattaactattatataatttccttttttatatccttaa 8473067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 333
Target Start/End: Complemental strand, 52431674 - 52431625
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttcttttt 333  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  52431674 aaattaattacacaatttcaatgcattaactactatataatttttttttt 52431625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 388
Target Start/End: Original strand, 10976008 - 10976099
Alignment:
Q  297 aatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaattatt 388  Q
    ||||| ||| |||||||||||||||||| | |||||||||||||||||  |||||| | ||| |||||| |||| ||||| ||| |||||||    
T  10976008 aattttaatgcattaactactatataatctcctttttcatatccttaacaagtgcctcagagacaccggctagcatttcctttttaattatt 10976099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 26228293 - 26228226
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||||| ||||||||| ||||||||||||||||||||  ||||| || |||||||    
T  26228293 ttattataaattaattacataatttcaatgcattaactactatataatttcattttttatctccttaa 26228226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 28481940 - 28481844
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||| ||| |||||    || |||||||| |||||||||||||||||  || ||||  ||||||||||||||| |||||    
T  28481940 ttattataaattaattacacaattttaatgcatta----ctgtataatttcctttttcatatccttaaccagggcccaagaggcaccggttagcatttcc 28481845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 45449330 - 45449397
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| || |||||||||| |||| ||| ||||||||||||||||||||||||||| ||||| ||||    
T  45449330 ttattataatttaattacactattttaatgcattaactactatataattttcttttttatatctttaa 45449397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 376
Target Start/End: Original strand, 19011112 - 19011180
Alignment:
Q  307 cattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||||||||||||||||| |||||||||||||||||   ||||||||| | ||||||||||| |||||    
T  19011112 cattaactactatataatttcctttttcatatccttaacccgtgccccgg-gacaccggttagcatttcc 19011180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 333
Target Start/End: Original strand, 37315360 - 37315409
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttcttttt 333  Q
    |||||||||||| ||||||||| |||||||||||||||||||| ||||||    
T  37315360 aaattaattacataatttcaatgcattaactactatataatttccttttt 37315409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 333
Target Start/End: Complemental strand, 49867523 - 49867474
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttcttttt 333  Q
    ||||||||||||||||||||| ||||||| |||||||||| |||||||||    
T  49867523 aaattaattacacaatttcaaaacattaattactatataactttcttttt 49867474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 52749684 - 52749635
Alignment:
Q  295 acaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    ||||||||||||||||||||| |||||||||| |||||||||||| ||||    
T  52749684 acaatttcaatacattaactattatataatttcctttttcatatctttaa 52749635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 344
Target Start/End: Original strand, 35700743 - 35700803
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    ||||||||||||||||||||||  |||||||||| |||||||| ||||||  |||||||||    
T  35700743 aaattaattacacaatttcaatgtattaactactgtataatttcctttttagtatccttaa 35700803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 277 - 368
Target Start/End: Complemental strand, 41730408 - 41730314
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacatta---actactatataattttctttttcatatccttaattagtgccccggaggcaccggtta 368  Q
    |||||| |||||||||| ||||||||||| |||||   |||||||||||||||  |||||||||| |||||   ||||||| | |||||||||||    
T  41730408 ttattataaattaattaaacaatttcaatgcattaattactactatataatttcttttttcatattcttaacccgtgcccctggggcaccggtta 41730314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 51368787 - 51368846
Alignment:
Q  223 ttagggtcctgctaatcggtgcgggacactggttaagcataccataaaaggaaattattac 283  Q
    |||||||||||||||||||||  || ||||||||||||||||||||||| | |||||||||    
T  51368787 ttagggtcctgctaatcggtggagg-cactggttaagcataccataaaatggaattattac 51368846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 283
Target Start/End: Original strand, 3784735 - 3784774
Alignment:
Q  244 cgggacactggttaagcataccataaaaggaaattattac 283  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  3784735 cgggacacgggttaagcataccataaaaggaaattattac 3784774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 331
Target Start/End: Complemental strand, 37503307 - 37503260
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttcttt 331  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  37503307 aaattaattacacaatttcaatgtattaactactatataatttccttt 37503260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 3097817 - 3097784
Alignment:
Q  250 actggttaagcataccataaaaggaaattattac 283  Q
    ||||||||||||||||||||||||||||||||||    
T  3097817 actggttaagcataccataaaaggaaattattac 3097784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 284 - 333
Target Start/End: Original strand, 3838870 - 3838919
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttcttttt 333  Q
    |||||||||||||||||| ||| ||||||||| |||||||||| ||||||    
T  3838870 aaattaattacacaattttaatgcattaactattatataatttccttttt 3838919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 51065747 - 51065809
Alignment:
Q  225 agggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattattac 283  Q
    ||||||||||||| ||||||    ||| ||||||||||||||||||||||||| |||||||||    
T  51065747 agggtcctgctaaccggtgcccctggggcactggttaagcataccataaaagggaattattac 51065809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 12072051 - 12072123
Alignment:
Q  215 tatttaaattagggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattattac 283  Q
    |||||||| |||||| ||||||| ||||||    ||| ||||||||||||||||||||||| | |||||||||    
T  12072051 tatttaaaatagggtgctgctaaccggtgcccccggggcactggttaagcataccataaaaaggaattattac 12072123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 283
Target Start/End: Complemental strand, 15227903 - 15227864
Alignment:
Q  244 cgggacactggttaagcataccataaaaggaaattattac 283  Q
    |||| ||||||||||||||||||||||||| |||||||||    
T  15227903 cggggcactggttaagcataccataaaagggaattattac 15227864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 319
Target Start/End: Original strand, 19011060 - 19011095
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactat 319  Q
    |||||||||||||||||||||| |||||||||||||    
T  19011060 aaattaattacacaatttcaatgcattaactactat 19011095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 283
Target Start/End: Original strand, 24178485 - 24178524
Alignment:
Q  244 cgggacactggttaagcataccataaaaggaaattattac 283  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  24178485 cggggcactggttaagcataccataaaatgaaattattac 24178524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 379
Target Start/End: Original strand, 28725999 - 28726094
Alignment:
Q  286 attaattacacaattt-caatacattaactactatataattttctttttcat-atccttaattagtgccccggaggcaccggttagcctttccctt 379  Q
    |||||||| ||||||| |||| || ||| ||  ||||||||| |||||| || ||||||||  |||||||||| ||||||||||||| ||||||||    
T  28725999 attaattaaacaattttcaatgcaataattaacatataatttccttttttattatccttaaccagtgccccgggggcaccggttagcatttccctt 28726094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 282
Target Start/End: Complemental strand, 30657788 - 30657728
Alignment:
Q  226 gggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattatta 282  Q
    |||||||||||||||||||    |||  |||||||||||||||||||||||| ||||||||    
T  30657788 gggtcctgctaatcggtgcctccggggtactggttaagcataccataaaagggaattatta 30657728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 5694480 - 5694446
Alignment:
Q  249 cactggttaagcataccataaaaggaaattattac 283  Q
    ||||||||||||||||||||||||| |||||||||    
T  5694480 cactggttaagcataccataaaagggaattattac 5694446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 375
Target Start/End: Original strand, 9413973 - 9414062
Alignment:
Q  286 attaattacacaattt-caatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    |||||||||||| ||| |||| || ||| |||| ||||||||||||||| ||||| ||||  | |||||||| ||||||||||||| ||||    
T  9413973 attaattacacagttttcaattcaataattactgtataattttctttttaatatctttaaccaatgccccgg-ggcaccggttagcatttc 9414062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 13961370 - 13961336
Alignment:
Q  249 cactggttaagcataccataaaaggaaattattac 283  Q
    |||||||||||||||||||||||| ||||||||||    
T  13961370 cactggttaagcataccataaaagaaaattattac 13961336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 29657930 - 29657896
Alignment:
Q  249 cactggttaagcataccataaaaggaaattattac 283  Q
    ||||||||||||||||||||||||| |||||||||    
T  29657930 cactggttaagcataccataaaagggaattattac 29657896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 326
Target Start/End: Complemental strand, 39081894 - 39081852
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattt 326  Q
    |||||||||| | ||||||||||||||||||| ||||||||||    
T  39081894 aaattaattataaaatttcaatacattaactagtatataattt 39081852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 283
Target Start/End: Original strand, 50128195 - 50128233
Alignment:
Q  245 gggacactggttaagcataccataaaaggaaattattac 283  Q
    ||||||||||||||||||||||||||||  |||||||||    
T  50128195 gggacactggttaagcataccataaaagagaattattac 50128233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 333
Target Start/End: Original strand, 16590308 - 16590356
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttcttttt 333  Q
    |||||||||||||||||| |||||||||| |  |||||||||||||||||    
T  16590308 aaattaattacacaattt-aatacattaattgttatataattttcttttt 16590356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 45449239 - 45449305
Alignment:
Q  221 aattagggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattattac 283  Q
    ||||||||||||||||| || |||    ||| |||||||||| |||||||||||||| |||||||||    
T  45449239 aattagggtcctgctaaccgatgcccctggggcactggttaaacataccataaaaggcaattattac 45449305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 21112678 - 21112735
Alignment:
Q  223 ttagggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaa 276  Q
    ||||||||||||||| ||||||    ||| |||| |||||||||||||||||||||||    
T  21112678 ttagggtcctgctaaccggtgccctcggggcactagttaagcataccataaaaggaaa 21112735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 285 - 344
Target Start/End: Original strand, 33644428 - 33644488
Alignment:
Q  285 aattaattacacaattt-caatacattaactactatataattttctttttcatatccttaa 344  Q
    ||||||||||||||||| |||| || ||| || ||||||||||||||||| ||| ||||||    
T  33644428 aattaattacacaattttcaatgcaataattattatataattttcttttttatagccttaa 33644488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 247 - 283
Target Start/End: Original strand, 36446350 - 36446386
Alignment:
Q  247 gacactggttaagcataccataaaaggaaattattac 283  Q
    |||||||||||| |||||||||||||| |||||||||    
T  36446350 gacactggttaaacataccataaaagggaattattac 36446386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 1e-36; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 277 - 379
Target Start/End: Complemental strand, 31390112 - 31390010
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| |||||    
T  31390112 ttattataaattaattacataatttcaatacattaactactatataatttcctttttcatatccttaactagtgccccggaggcaccagttagcatttcc 31390013  T
Q  377 ctt 379  Q
    |||    
T  31390012 ctt 31390010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 277 - 380
Target Start/End: Original strand, 561604 - 561707
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  |||||||||| ||||||||||||| |||||    
T  561604 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttcc 561703  T
Q  377 cttt 380  Q
    ||||    
T  561704 cttt 561707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 287 - 379
Target Start/End: Complemental strand, 30486300 - 30486208
Alignment:
Q  287 ttaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 379  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||| |||||| |||||| ||||||||    
T  30486300 ttaattacacaatttcaatacattaactactatataatttcctttttcatatccttaaccagtgccccgggggcaccagttagcatttccctt 30486208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 277 - 379
Target Start/End: Original strand, 34442618 - 34442719
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||   ||||||||| ||||||||||||| |||||    
T  34442618 ttattataaattaattacacaatttcaatgcattaactactatataatcttctttttcatatccttaacatgtgccccgg-ggcaccggttagcatttcc 34442716  T
Q  377 ctt 379  Q
    |||    
T  34442717 ctt 34442719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 277 - 378
Target Start/End: Original strand, 26891749 - 26891850
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| ||||||||| |||||||||| |||||| ||||||||||| |||| ||||| ||||||||||||| |||||    
T  26891749 ttattataaattaattacacaatttcaatgcattaactaatatataatttccttttttatatccttaatcagtgtcccgggggcaccggttagcatttcc 26891848  T
Q  377 ct 378  Q
    ||    
T  26891849 ct 26891850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 31438746 - 31438646
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||  ||||||||||  |||||||||||| |||||    
T  31438746 ttattataaattaattacacaatttcaatgcattaactactgtataatttcctttttcatatccttaaccagtgccccgggagcaccggttagcatttcc 31438647  T
Q  377 c 377  Q
    |    
T  31438646 c 31438646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 276 - 370
Target Start/End: Complemental strand, 4381896 - 4381802
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagc 370  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||  ||||| |||| |||||||||||||    
T  4381896 attattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgcaccgggggcaccggttagc 4381802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 277 - 379
Target Start/End: Original strand, 26387150 - 26387252
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  ||| |  |||||||||| |||||| |||||    
T  26387150 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacaagtacttcggaggcaccagttagcatttcc 26387249  T
Q  377 ctt 379  Q
    |||    
T  26387250 ctt 26387252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 277 - 382
Target Start/End: Complemental strand, 2898171 - 2898067
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||  |||| | ||||||||| | |||||    
T  2898171 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatatccttaaccagtgttccgg-gacaccggttaacatttcc 2898073  T
Q  377 ctttaa 382  Q
    ||||||    
T  2898072 ctttaa 2898067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 277 - 377
Target Start/End: Original strand, 8969493 - 8969591
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||  | ||||| ||||||| |||||    
T  8969493 ttattataaattaattacactatttcaatgcattaactactatataattttctttttcatatccttaactagtgccc--ggggcactggttagcatttcc 8969590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 277 - 378
Target Start/End: Complemental strand, 22887850 - 22887749
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||| ||||||||| ||||||||||||||||||||  ||||||||||||||||  | ||||||||||||| |||||||| |||||    
T  22887850 ttattataaattaattacataatttcaatgcattaactactatataatttcttttttcatatccttaaccactgccccggaggcatcggttagcatttcc 22887751  T
Q  377 ct 378  Q
    ||    
T  22887750 ct 22887749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 285 - 377
Target Start/End: Complemental strand, 20553023 - 20552931
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 377  Q
    ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||  |||||||| | ||||||||||||| ||||||    
T  20553023 aattaattacacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgcccccggggcaccggttagcatttccc 20552931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 44588002 - 44587902
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||||||||||||  ||||||||||||||||||| |||||| ||||||||||   ||||||||| ||||||||||||| |||||    
T  44588002 ttattataaattaattacacaatttcaatgtattaactactatataatttccttttttatatccttaaccggtgccccgggggcaccggttagcatttcc 44587903  T
Q  377 c 377  Q
    |    
T  44587902 c 44587902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 276 - 379
Target Start/End: Original strand, 27856481 - 27856584
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| ||||||||| |||||||||| ||||||||||  |||||  |||||||||| ||||||||||| | ||||    
T  27856481 attattataaattaattacacaatttcaatgcattaactattatataatttcctttttcatactcttaaccagtgccccgggggcaccggttaacatttc 27856580  T
Q  376 cctt 379  Q
    ||||    
T  27856581 cctt 27856584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 43637264 - 43637165
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||  |||| | ||| ||||||||||||| |||||    
T  43637264 ttattataaattaattacacaatttcaatgcattaactactatataatttccttattcatatccttaaccagtgtctcgg-ggcaccggttagcatttcc 43637166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 22567702 - 22567635
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  22567702 ttattataaattaattacacaatttcaatacattaactactatataatttcttttttcatatccttaa 22567635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 276 - 378
Target Start/End: Complemental strand, 6580290 - 6580188
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||||| ||| |||||||||| ||||||  |||||||| | ||||| ||||||| ||||    
T  6580290 attattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccccggggcactggttagcatttc 6580191  T
Q  376 cct 378  Q
    |||    
T  6580190 cct 6580188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 277 - 379
Target Start/End: Complemental strand, 32860202 - 32860100
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||| ||||||||||||| |||||| ||||||||||   ||||||| | ||||||||||| | |||||    
T  32860202 ttattataaattaattacacaatttcaatgcattaaatactatataatttccttttttatatccttaacccgtgcccccggggcaccggttaacatttcc 32860103  T
Q  377 ctt 379  Q
    |||    
T  32860102 ctt 32860100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 285 - 379
Target Start/End: Original strand, 38590968 - 38591062
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 379  Q
    ||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||||  |||||||| | | ||||||||||| ||||||||    
T  38590968 aattaattacacaattttaatacattaactactgtataatttcctttttcatattcttaaccagtgccccagggacaccggttagcatttccctt 38591062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 285 - 378
Target Start/End: Original strand, 32360963 - 32361056
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 378  Q
    ||||||||| |  |||||||| ||||||||| ||||||||||||||||||| ||||||||  |||||||||| ||||||||||||| |||||||    
T  32360963 aattaattatattatttcaatgcattaactattatataattttctttttcacatccttaaccagtgccccgggggcaccggttagcatttccct 32361056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 38296277 - 38296178
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||||||||||||  ||||| |||||||||||||||||||||||||| ||||  ||||||||  || ||||||||||| |||||    
T  38296277 ttattataaattaattacacaatttcaatgtattaattactatataattttctttttcatatctttaaccagtgcccc-aagacaccggttagcatttcc 38296179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 276 - 370
Target Start/End: Original strand, 3668198 - 3668291
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagc 370  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||| |||| ||||||  ||||  |||| |||||||||||||    
T  3668198 attattataaattaattacacaatttcaatgcattaactactatataatttccttttccatacccttaaccagtg-tccgggggcaccggttagc 3668291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 277 - 351
Target Start/End: Original strand, 5093625 - 5093699
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgc 351  Q
    |||||| |||||||||||||||||| ||| ||||||||||||| |||||| ||||||||||||||||| ||||||    
T  5093625 ttattataaattaattacacaattttaatgcattaactactatttaatttcctttttcatatccttaactagtgc 5093699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 277 - 381
Target Start/End: Original strand, 11021308 - 11021411
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| | |||||||||||||||||||| |||||||||| |||||||||  ||||||||||| ||||| ||||| || |||||||| |||| | |||||    
T  11021308 ttattatatattaattacacaatttcaatgcattaactaccatataatttcttttttcatatctttaatcagtgctcc-gaggcaccagttaacatttcc 11021406  T
Q  377 cttta 381  Q
    |||||    
T  11021407 cttta 11021411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 27584838 - 27584771
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||||||||||||||| | |||||||||||||||||| | |||||||||||||||    
T  27584838 ttattataaattaattacacaatttcaatgctttaactactatataatttcccttttcatatccttaa 27584771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 379
Target Start/End: Original strand, 4022565 - 4022666
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||| ||||||||||||||||||||||| ||||||  |||||||||| |||||| |||  ||||  |||||| |||||| |||||    
T  4022565 ttattataaattaattacagaatttcaatacattaactactat-taatttcttttttcatattcttaatcagtatcccgtgggcaccagttagcatttcc 4022663  T
Q  377 ctt 379  Q
    |||    
T  4022664 ctt 4022666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 379
Target Start/End: Original strand, 22068414 - 22068507
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 379  Q
    ||||||||| ||||||||||| ||| |||||||||||||||  |||||||||||||||||  |||||||||| |||||  |||||| ||||||||    
T  22068414 aattaattatacaatttcaatgcat-aactactatataattccctttttcatatccttaaccagtgccccgggggcacttgttagcatttccctt 22068507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 277 - 378
Target Start/End: Complemental strand, 1859262 - 1859161
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||| ||||||||| |||||||||||||| |||||  ||||| ||||||||||  | | |||||| |||||| |||||| |||||    
T  1859262 ttattataaattaattacataatttcaatgcattaactactatacaatttctttttttatatccttaaccattaccccgggggcaccagttagcatttcc 1859163  T
Q  377 ct 378  Q
    ||    
T  1859162 ct 1859161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 284 - 333
Target Start/End: Original strand, 15079051 - 15079100
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttcttttt 333  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15079051 aaattaattacacaatttcaatacattaactactatataatttccttttt 15079100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 13574115 - 13574182
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| ||||||||||||||||||||||||||||| |  |||||| ||| |||||||||||||||||    
T  13574115 ttattataaattaattacacaatttcaatacattaatttttatatattttcctttttcatatccttaa 13574182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 333
Target Start/End: Complemental strand, 39531917 - 39531868
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttcttttt 333  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  39531917 aaattaattacacaatttcaatgcattaactactatataatttccttttt 39531868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 344
Target Start/End: Complemental strand, 5881313 - 5881250
Alignment:
Q  285 aattaattacacaatttcaatacat----taactactatataattttctttttcatatccttaa 344  Q
    ||||||||||||||||||||| |||    ||||||||||||||||| |||||||||||||||||    
T  5881313 aattaattacacaatttcaatgcatgcattaactactatataatttcctttttcatatccttaa 5881250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 22068318 - 22068381
Alignment:
Q  224 tagggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattattac 283  Q
    |||||||||||||||||||||    ||| ||||||||||||||||||||||||| |||||||||    
T  22068318 tagggtcctgctaatcggtgcccccggggcactggttaagcataccataaaagggaattattac 22068381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 284 - 378
Target Start/End: Original strand, 34123117 - 34123211
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 378  Q
    ||||||||||||||| |||||  ||||||||| ||||||||||  |||||  ||| || ||  ||| |||||||||||||||||||| |||||||    
T  34123117 aaattaattacacaaattcaaagcattaactattatataatttcttttttagtatgctcaaccagtaccccggaggcaccggttagcatttccct 34123211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 380
Target Start/End: Original strand, 25782919 - 25783018
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||| |||||||||||||||||| |||||   |||||||||||| ||||||||||| ||||| ||||| |  || ||||||||||||| ||| |    
T  25782919 ttattataaaataattacacaatttcaatgcatta---actatataatttcctttttcatattcttaactagtgtcttgg-ggcaccggttagcattttc 25783014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 286 - 375
Target Start/End: Original strand, 16807318 - 16807409
Alignment:
Q  286 attaattacacaattt-caatacattaactactatataattttcttttt-catatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    |||||||||||| ||| |||| || ||||||||||||||||||||||||  | ||||||||  | |||| ||||||||||||||||| ||||    
T  16807318 attaattacacagttttcaatgcaataactactatataattttctttttaaacatccttaaccaatgcctcggaggcaccggttagcatttc 16807409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 286 - 375
Target Start/End: Original strand, 16846599 - 16846690
Alignment:
Q  286 attaattacacaattt-caatacattaactactatataattttcttttt-catatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    |||||||||||| ||| |||| || ||||||||||||||||||||||||  | ||||||||  | |||| ||||||||||||||||| ||||    
T  16846599 attaattacacagttttcaatgcaataactactatataattttctttttaaacatccttaaccaatgcctcggaggcaccggttagcatttc 16846690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 20553124 - 20553056
Alignment:
Q  219 taaattagggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattattac 283  Q
    ||||| ||||||||||||| ||||||    ||| ||||||||||||||||||||||||| |||||||||    
T  20553124 taaataagggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattac 20553056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 283
Target Start/End: Original strand, 27856418 - 27856457
Alignment:
Q  244 cgggacactggttaagcataccataaaaggaaattattac 283  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  27856418 cggggcactggttaagcataccataaaaggaaattattac 27856457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 285 - 344
Target Start/End: Original strand, 35851845 - 35851904
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||||||||  |||||||| ||||||||| |||||||||| |||||||| ||||||||    
T  35851845 aattaattacattatttcaatgcattaactattatataatttcctttttcacatccttaa 35851904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 25782855 - 25782893
Alignment:
Q  244 cgggacactggttaagcataccataaaaggaaattatta 282  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  25782855 cgggacactggttaagcataccataaaagggaattatta 25782893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 282
Target Start/End: Complemental strand, 31438839 - 31438772
Alignment:
Q  219 taaattagggtcctgctaatcggtg----cgggacactggttaagcataccataaaaggaaattatta 282  Q
    ||||| ||||||||||||| |||||    |||| ||||||||||||||||||||||||| ||||||||    
T  31438839 taaataagggtcctgctaaccggtgtccccggggcactggttaagcataccataaaagggaattatta 31438772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 354
Target Start/End: Complemental strand, 28601058 - 28600990
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgcccc 354  Q
    ||||||||| ||||||||||| ||| ||||||| |||||||  |||||||||||||||||  ||||||||    
T  28601058 aattaattatacaatttcaatgcat-aactactttataattccctttttcatatccttaaccagtgcccc 28600990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 283
Target Start/End: Complemental strand, 30486396 - 30486335
Alignment:
Q  226 gggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattattac 283  Q
    |||||||||||| ||||||    ||| ||||||||||||||||||||||||| |||||||||    
T  30486396 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattac 30486335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 284
Target Start/End: Complemental strand, 32860265 - 32860225
Alignment:
Q  244 cgggacactggttaagcataccataaaaggaaattattaca 284  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  32860265 cgggacactggttaagcataccataaaagagaattattaca 32860225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 283
Target Start/End: Complemental strand, 6580353 - 6580314
Alignment:
Q  244 cgggacactggttaagcataccataaaaggaaattattac 283  Q
    |||| ||||||||||||||||||||||||| |||||||||    
T  6580353 cggggcactggttaagcataccataaaagggaattattac 6580314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 29102369 - 29102436
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||| | |||||||||  ||||||  |||||||||||||||||| |||| |||||    
T  29102369 ttattataaattaattataaaatttcaatgtattaaccgctatataattttctttttgatattcttaa 29102436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 290 - 333
Target Start/End: Original strand, 30217662 - 30217705
Alignment:
Q  290 attacacaatttcaatacattaactactatataattttcttttt 333  Q
    |||||||||||||||| || ||| ||||||||||||||||||||    
T  30217662 attacacaatttcaatgcaataaatactatataattttcttttt 30217705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 4022501 - 4022539
Alignment:
Q  244 cgggacactggttaagcataccataaaaggaaattatta 282  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  4022501 cgggacactggttaaacatatcataaaaggaaattatta 4022539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 283
Target Start/End: Original strand, 13574060 - 13574090
Alignment:
Q  253 ggttaagcataccataaaaggaaattattac 283  Q
    |||||||||||||||||||||||||||||||    
T  13574060 ggttaagcataccataaaaggaaattattac 13574090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 350
Target Start/End: Complemental strand, 25772211 - 25772137
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaacta-ctatataattttctttttcatatccttaattagtg 350  Q
    |||||| |||||||||||||||||||| | |||||| ||  | |||||||| ||||||||||| ||||| |||||    
T  25772211 ttattataaattaattacacaatttcattgcattaattatttttataatttcctttttcatattcttaactagtg 25772137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 26387091 - 26387125
Alignment:
Q  249 cactggttaagcataccataaaaggaaattattac 283  Q
    ||||||||||||||||||||||||| |||||||||    
T  26387091 cactggttaagcataccataaaagggaattattac 26387125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 34442559 - 34442593
Alignment:
Q  249 cactggttaagcataccataaaaggaaattattac 283  Q
    ||||||||||||||||||||||||| |||||||||    
T  34442559 cactggttaagcataccataaaagggaattattac 34442593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 35851925 - 35851966
Alignment:
Q  347 agtgccccggaggcaccggttagcctttccctttaaattatt 388  Q
    |||||||||| ||||||||||||| |||||||| ||||||||    
T  35851925 agtgccccgggggcaccggttagcatttcccttaaaattatt 35851966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 226 - 283
Target Start/End: Original strand, 32360869 - 32360930
Alignment:
Q  226 gggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattattac 283  Q
    |||||||||||| ||||||    ||| || |||||||||||||||||||||| |||||||||    
T  32360869 gggtcctgctaaccggtgcccccggggcattggttaagcataccataaaagggaattattac 32360930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 2e-35; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 276 - 380
Target Start/End: Complemental strand, 168567 - 168463
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||  |||||||||||||||||||||||| ||||    
T  168567 attattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccggaggcaccggttagcatttc 168468  T
Q  376 ccttt 380  Q
    |||||    
T  168467 ccttt 168463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 277 - 379
Target Start/End: Original strand, 27988585 - 27988687
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||  |||||||||||||||||||||||| |||||    
T  27988585 ttattataaattaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgccccggaggcaccggttagcatttcc 27988684  T
Q  377 ctt 379  Q
    |||    
T  27988685 ctt 27988687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 277 - 379
Target Start/End: Original strand, 28045887 - 28045989
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||  |||||||||||||||||||||||| |||||    
T  28045887 ttattataaattaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgccccggaggcaccggttagcatttcc 28045986  T
Q  377 ctt 379  Q
    |||    
T  28045987 ctt 28045989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 276 - 377
Target Start/End: Original strand, 30675657 - 30675758
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||  |||||||||| ||||||||||||| ||||    
T  30675657 attattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttc 30675756  T
Q  376 cc 377  Q
    ||    
T  30675757 cc 30675758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 277 - 378
Target Start/End: Complemental strand, 43119317 - 43119216
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||  ||||||||||||| |||||    
T  43119317 ttattataaattaattatacaatttcaatgcattaactactatataattttctttttcatatctttaatcagtgccccgagggcaccggttagcatttcc 43119218  T
Q  377 ct 378  Q
    ||    
T  43119217 ct 43119216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 276 - 379
Target Start/End: Complemental strand, 4648295 - 4648193
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| ||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||||||||| ||||    
T  4648295 attattataaattaattacacaatttcaatgtattaactactatataatttcctttttcatatccttaatcagtgccccgg-gacaccggttagcatttc 4648197  T
Q  376 cctt 379  Q
    ||||    
T  4648196 cctt 4648193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 277 - 384
Target Start/End: Complemental strand, 13643112 - 13643005
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||| ||||||||| |||||||||||||||||||| ||||||| |||||||||  |||||||||| ||||||||||||| ||| |    
T  13643112 ttattataaattaattacataatttcaatgcattaactactatataatttcctttttcgtatccttaaccagtgccccgggggcaccggttagcattttc 13643013  T
Q  377 ctttaaat 384  Q
    ||||||||    
T  13643012 ctttaaat 13643005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 277 - 384
Target Start/End: Complemental strand, 13743537 - 13743430
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||| ||||||||| |||||||||||||||||||| ||||||| |||||||||  |||||||||| ||||||||||||| ||| |    
T  13743537 ttattataaattaattacataatttcaatgcattaactactatataatttcctttttcgtatccttaaccagtgccccgggggcaccggttagcattttc 13743438  T
Q  377 ctttaaat 384  Q
    ||||||||    
T  13743437 ctttaaat 13743430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 277 - 387
Target Start/End: Complemental strand, 16785186 - 16785077
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||| |||||    
T  16785186 ttattataaattaattacacaatttcaatacattaactgctatataatttcttttttcatatccttaaccagtgccctgga-gcaccggttagcatttcc 16785088  T
Q  377 ctttaaattat 387  Q
    ||| |||||||    
T  16785087 cttaaaattat 16785077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 277 - 379
Target Start/End: Original strand, 33357215 - 33357317
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  ||||| |||| |||||| |||||| |||||    
T  33357215 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgctccgggggcaccagttagcatttcc 33357314  T
Q  377 ctt 379  Q
    |||    
T  33357315 ctt 33357317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 277 - 378
Target Start/End: Complemental strand, 11112739 - 11112638
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  |||| |||||| ||||| |||||| |||||    
T  11112739 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgtcccggatgcaccagttagcatttcc 11112640  T
Q  377 ct 378  Q
    ||    
T  11112639 ct 11112638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 277 - 368
Target Start/End: Original strand, 29444226 - 29444317
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggtta 368  Q
    |||||| |||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||| ||||||||||  ||||||||||    
T  29444226 ttattataaattaattacacaatttcaatgcgttaactactatataatttcctttttcatatccttaatcagtgccccgggagcaccggtta 29444317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 277 - 364
Target Start/End: Original strand, 42035067 - 42035154
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccg 364  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||| |||| |||||||    
T  42035067 ttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaaccagtgctccgggggcaccg 42035154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 285 - 379
Target Start/End: Original strand, 4537838 - 4537932
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 379  Q
    ||||||||||| ||||||||| |||||||||||||||||||| || ||| ||||||||||  |||||||||||||||||||||||| ||||||||    
T  4537838 aattaattacataatttcaatgcattaactactatataatttcctattttatatccttaaccagtgccccggaggcaccggttagcatttccctt 4537932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 285 - 377
Target Start/End: Complemental strand, 34228774 - 34228682
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 377  Q
    ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||  |||||||| | ||||||||||||| ||||||    
T  34228774 aattaattacacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgcccccggggcaccggttagcatttccc 34228682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 7304604 - 7304671
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7304604 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatatccttaa 7304671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 277 - 376
Target Start/End: Original strand, 16888630 - 16888728
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||   ||| ||||| ||||||||||||| |||||    
T  16888630 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacctgtg-cccgggggcaccggttagcatttcc 16888728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 277 - 379
Target Start/End: Complemental strand, 9278312 - 9278210
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| ||||  |||| ||| |||||||| |||||| |||||    
T  9278312 ttattataaattaattacacaatttcaatgcattaactattatataatttcctttttcatatctttaacgagtgtccctgaggcaccagttagcatttcc 9278213  T
Q  377 ctt 379  Q
    |||    
T  9278212 ctt 9278210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 277 - 375
Target Start/End: Original strand, 20831639 - 20831737
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    |||||| |||||||||| || |||||||| |||||||||||||||||||| |||||||||||||||||  |||| ||||| ||||||||||||| ||||    
T  20831639 ttattataaattaattatactatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgtcccgggggcaccggttagcatttc 20831737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 350
Target Start/End: Complemental strand, 36730544 - 36730471
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtg 350  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||    
T  36730544 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaactagtg 36730471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 285 - 377
Target Start/End: Original strand, 16394155 - 16394247
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 377  Q
    |||||||||||  |||||||| ||||||||| ||||||||||||||||||| ||||||||  |||||||||| ||||||||||||| ||||||    
T  16394155 aattaattacattatttcaatgcattaactattatataattttctttttcacatccttaaccagtgccccgggggcaccggttagcatttccc 16394247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 276 - 376
Target Start/End: Complemental strand, 21595947 - 21595848
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| |||||||| ||||||||||| |||||||||| ||||||  |||| ||||| ||||||||||||| ||||    
T  21595947 attattataaattaattacacaatttcaatgcattaactcctatataatttcctttttcatacccttaaccagtg-cccgggggcaccggttagcatttc 21595849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 277 - 379
Target Start/End: Original strand, 9063138 - 9063239
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||| ||| |||||||| |||||||||||||||||||| |||||||||||||||||  ||||| |||| | ||||||||||| |||||    
T  9063138 ttattataaattaattgcacgatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgctccgg-gacaccggttagcatttcc 9063236  T
Q  377 ctt 379  Q
    |||    
T  9063237 ctt 9063239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 285 - 379
Target Start/End: Complemental strand, 10618110 - 10618016
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 379  Q
    ||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||   ||||||  ||||||||||||||| ||| ||||    
T  10618110 aattaattacacaatttaattgcattaactactatataattttctttttcatatccttaacctgtgccctagaggcaccggttagcattttcctt 10618016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 285 - 354
Target Start/End: Original strand, 16890574 - 16890643
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgcccc 354  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| | |||||||    
T  16890574 aattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaactggtgcccc 16890643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 277 - 370
Target Start/End: Complemental strand, 32114008 - 32113915
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagc 370  Q
    |||||| |||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||  | | | |||||| |||||||||||    
T  32114008 ttattataaattaattaaacaatttcaatgcattaactactatataatttcctttttcatatccttaaccaatactccggagacaccggttagc 32113915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 285 - 377
Target Start/End: Complemental strand, 37373297 - 37373206
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 377  Q
    ||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||  ||||  |||| ||||||||||||| ||||||    
T  37373297 aattaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtg-tccgggggcaccggttagcatttccc 37373206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 9537910 - 9537977
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||    
T  9537910 ttattataaattaattacacaattttaatgcattaactactatataatttcctttttcatatccttaa 9537977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 28626868 - 28626801
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  28626868 ttattataaattaatcacacaatttcaatacattaactactatataatttcctttttcacatccttaa 28626801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 40831377 - 40831310
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  40831377 ttattataaattaattatacaatttcaatgcattaactactatataattttctttttcatatctttaa 40831310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 287 - 377
Target Start/End: Original strand, 2805356 - 2805446
Alignment:
Q  287 ttaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 377  Q
    ||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||  |||| ||||| ||||| ||||| | ||||||    
T  2805356 ttaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgtcccgggggcactggttaacatttccc 2805446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 276 - 378
Target Start/End: Complemental strand, 12203955 - 12203854
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||  ||||||||| ||||||   ||  ||||| ||||||||||||| ||||    
T  12203955 attattataaattaattacacaatttcaatgcattaactactatataatttcttttttcatacccttaaccggt-acccgggggcaccggttagcatttc 12203857  T
Q  376 cct 378  Q
    |||    
T  12203856 cct 12203854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 276 - 378
Target Start/End: Complemental strand, 12448383 - 12448282
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||  ||||||||| ||||||   ||  ||||| ||||||||||||| ||||    
T  12448383 attattataaattaattacacaatttcaatgcattaactactatataatttcttttttcatacccttaaccggt-acccgggggcaccggttagcatttc 12448285  T
Q  376 cct 378  Q
    |||    
T  12448284 cct 12448282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 356
Target Start/End: Original strand, 9253996 - 9254066
Alignment:
Q  286 attaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccgg 356  Q
    |||||||||||||||||||| |||||||||||||| |||||  ||||||||||||||||  ||||||||||    
T  9253996 attaattacacaatttcaatgcattaactactataaaatttcatttttcatatccttaaccagtgccccgg 9254066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 343
Target Start/End: Complemental strand, 34192875 - 34192809
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatcctta 343  Q
    |||||| |||||||||||||||||||||| ||||||||| |||||||||| ||||||||||| ||||    
T  34192875 ttattataaattaattacacaatttcaatgcattaactagtatataatttcctttttcatattctta 34192809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 285 - 378
Target Start/End: Original strand, 3930327 - 3930419
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 378  Q
    |||||||||||||| |||||| |||||||||||||||||||| || ||||||||  |||| ||||| ||||| ||||||| ||||| |||||||    
T  3930327 aattaattacacaacttcaatgcattaactactatataatttcctctttcatattattaactagtg-cccgggggcaccgattagcatttccct 3930419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 377
Target Start/End: Complemental strand, 12652707 - 12652630
Alignment:
Q  300 ttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 377  Q
    |||||| |||||||||||||||||||| |||||||||||||||||  ||||| || | ||||||||||||| ||||||    
T  12652707 ttcaatgcattaactactatataatttcctttttcatatccttaaccagtgctccaggggcaccggttagcatttccc 12652630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 29235335 - 29235235
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||||| || ||| ||||||||||||||||||||  ||||| ||||||||||| | ||| ||||   ||||||||||| |||||    
T  29235335 ttattataaattaattacacaaatttaatgcattaactactatataatttctttttttatatccttaatcaatgctccgggaacaccggttagcatttcc 29235236  T
Q  377 c 377  Q
    |    
T  29235235 c 29235235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 10870452 - 10870385
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| ||||||||||||||||||||||  |||||||| ||||||||||||||||| ||||| ||||    
T  10870452 ttattataaattaattacacaatttcaatgtattaactattatataattttcttttttatatcattaa 10870385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 226 - 283
Target Start/End: Original strand, 9537824 - 9537885
Alignment:
Q  226 gggtcctgctaatcggtg----cgggacactggttaagcataccataaaaggaaattattac 283  Q
    |||||||||||| |||||    ||||||||||||||||||||||||||||||||||||||||    
T  9537824 gggtcctgctaaccggtgtctccgggacactggttaagcataccataaaaggaaattattac 9537885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 369
Target Start/End: Original strand, 36923782 - 36923841
Alignment:
Q  310 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttag 369  Q
    |||||| |||||||||| |||||||||||||||||| |||||| |||||||| |||||||    
T  36923782 taactattatataatttcctttttcatatccttaatcagtgcctcggaggcagcggttag 36923841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 379
Target Start/End: Complemental strand, 17467695 - 17467601
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 379  Q
    ||||||||||||||||||||| |||||| ||||  ||||||| |||||||||||| |||| |||||   ||| || |||||||||| ||| ||||    
T  17467695 aattaattacacaatttcaatgcattaattactgcataatttcctttttcatatcattaactagtgtttcgggggtaccggttagcattttcctt 17467601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 333
Target Start/End: Original strand, 42433636 - 42433685
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttcttttt 333  Q
    |||||||||||||||||||||| ||||||||| |||||||||| ||||||    
T  42433636 aaattaattacacaatttcaatgcattaactattatataatttccttttt 42433685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 327
Target Start/End: Complemental strand, 22451877 - 22451834
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataatttt 327  Q
    |||||||||||||||||||||| |||||||| ||||||||||||    
T  22451877 aaattaattacacaatttcaatgcattaactgctatataatttt 22451834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 29444139 - 29444201
Alignment:
Q  225 agggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattattac 283  Q
    ||||||||| ||||||||||    |||||||||||||| |||||||||||||| |||||||||    
T  29444139 agggtcctgttaatcggtgcctccgggacactggttaaacataccataaaagggaattattac 29444201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 3930232 - 3930293
Alignment:
Q  225 agggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattatta 282  Q
    |||||||||||||||| |||    ||| ||||||||||||||| ||||||||||||||||||    
T  3930232 agggtcctgctaatcgatgctcctggggcactggttaagcatatcataaaaggaaattatta 3930293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 27988498 - 27988560
Alignment:
Q  224 tagggtcctgctaatcggtgcg---ggacactggttaagcataccataaaaggaaattattac 283  Q
    |||||||||||||| ||||||    || ||||||||||||||||||||||||| |||||||||    
T  27988498 tagggtcctgctaaccggtgcccccgggcactggttaagcataccataaaagggaattattac 27988560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 28045800 - 28045862
Alignment:
Q  224 tagggtcctgctaatcggtgcg---ggacactggttaagcataccataaaaggaaattattac 283  Q
    |||||||||||||| ||||||    || ||||||||||||||||||||||||| |||||||||    
T  28045800 tagggtcctgctaaccggtgcccccgggcactggttaagcataccataaaagggaattattac 28045862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 283
Target Start/End: Complemental strand, 34228868 - 34228807
Alignment:
Q  226 gggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattattac 283  Q
    |||||||||||| ||||||    ||| ||||||||||||||||||||||||| |||||||||    
T  34228868 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattac 34228807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 283
Target Start/End: Original strand, 2805282 - 2805321
Alignment:
Q  244 cgggacactggttaagcataccataaaaggaaattattac 283  Q
    |||| ||||||||||||||||||||||||| |||||||||    
T  2805282 cggggcactggttaagcataccataaaagggaattattac 2805321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 21596010 - 21595975
Alignment:
Q  244 cgggacactggttaagcataccataaaaggaaatta 279  Q
    |||||||||||||||||||||||||||||| |||||    
T  21596010 cgggacactggttaagcataccataaaagggaatta 21595975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 30933414 - 30933453
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataa 323  Q
    |||||||||||||||||||||| |||||| ||||||||||    
T  30933414 aaattaattacacaatttcaatgcattaattactatataa 30933453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 381
Target Start/End: Complemental strand, 4811651 - 4811553
Alignment:
Q  285 aattaattacacaattt-caatacattaactactatataattttctttttca-tatccttaattagtgccccggaggcaccggttagcctttcccttta 381  Q
    ||||||||| ||||||| |||| || ||| |||||||||||||||||||| | ||| |||||   ||||||  ||||||||| ||||| ||||||||||    
T  4811651 aattaattatacaattttcaatgcaataattactatataattttcttttttagtattcttaaccggtgcccttgaggcaccgattagcatttcccttta 4811553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 12204018 - 12203980
Alignment:
Q  244 cgggacactggttaagcataccataaaaggaaattatta 282  Q
    ||||||||||||| |||||||||||||||| ||||||||    
T  12204018 cgggacactggttcagcataccataaaagggaattatta 12203980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 12448446 - 12448408
Alignment:
Q  244 cgggacactggttaagcataccataaaaggaaattatta 282  Q
    ||||||||||||| |||||||||||||||| ||||||||    
T  12448446 cgggacactggttcagcataccataaaagggaattatta 12448408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 333
Target Start/End: Original strand, 16196897 - 16196947
Alignment:
Q  284 aaattaattacacaattt-caatacattaactactatataattttcttttt 333  Q
    |||||||||||||||||| ||||| | |||||| |||||||||||||||||    
T  16196897 aaattaattacacaattttcaatataataactattatataattttcttttt 16196947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 29235399 - 29235361
Alignment:
Q  244 cgggacactggttaagcataccataaaaggaaattatta 282  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  29235399 cgggacactggttaagcatcctataaaaggaaattatta 29235361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 4537743 - 4537805
Alignment:
Q  225 agggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattattac 283  Q
    ||||||||||||| ||||||    ||| ||| ||||||||||||||||||||| |||||||||    
T  4537743 agggtcctgctaaccggtgcctctggggcacaggttaagcataccataaaagggaattattac 4537805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 377
Target Start/End: Original strand, 39751597 - 39751658
Alignment:
Q  317 tatataattttctttttcat-atccttaattagtgccccggaggcaccggttagcctttccc 377  Q
    |||||||||||| |||| || ||||||||  |||||||||| ||||||||||||| ||||||    
T  39751597 tatataattttcctttttattatccttaaccagtgccccgggggcaccggttagcatttccc 39751658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 168656 - 168591
Alignment:
Q  222 attagggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattattac 283  Q
    |||||||||||||||| ||||||    ||| || |||||||||||||||||||| | |||||||||    
T  168656 attagggtcctgctaaccggtgcccccggggcattggttaagcataccataaaatggaattattac 168591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 282
Target Start/End: Complemental strand, 28626930 - 28626894
Alignment:
Q  246 ggacactggttaagcataccataaaaggaaattatta 282  Q
    |||||||| ||||||||||||||||||| ||||||||    
T  28626930 ggacactgattaagcataccataaaagggaattatta 28626894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 285 - 333
Target Start/End: Original strand, 34890652 - 34890700
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttcttttt 333  Q
    |||| ||||||||||||||||  | ||| ||||||||||||||||||||    
T  34890652 aattgattacacaatttcaatgtaataaatactatataattttcttttt 34890700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 6e-35; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 276 - 383
Target Start/End: Complemental strand, 4089243 - 4089136
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||| ||||    
T  4089243 attattataaattaattacacaatttcaatgcattaactactatataattttctttttcatacccttaatcagtgccccaggggcaccggttagcatttc 4089144  T
Q  376 cctttaaa 383  Q
    ||| ||||    
T  4089143 cctataaa 4089136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 276 - 379
Target Start/End: Complemental strand, 43944608 - 43944505
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||  |||||||||||||||||||||||| ||||    
T  43944608 attattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccggaggcaccggttagcatttc 43944509  T
Q  376 cctt 379  Q
    ||||    
T  43944508 cctt 43944505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 276 - 384
Target Start/End: Complemental strand, 16536149 - 16536041
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||  ||||||||| ||||||||||||| ||||    
T  16536149 attattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaatccgtgccccgggggcaccggttagcatttc 16536050  T
Q  376 cctttaaat 384  Q
    |||| ||||    
T  16536049 ccttaaaat 16536041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 276 - 380
Target Start/End: Original strand, 789615 - 789719
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||   ||||||||| ||||||||||||| ||||    
T  789615 attattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaacccgtgccccgggggcaccggttagcatttc 789714  T
Q  376 ccttt 380  Q
    |||||    
T  789715 ccttt 789719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 276 - 380
Target Start/End: Complemental strand, 7769039 - 7768935
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||  |||||||||| || |||| ||||| ||||    
T  7769039 attattataaattaattacacaatttcaatacattaactactatataatttcctttttcatacccttaaccagtgccccgggggtaccgattagcatttc 7768940  T
Q  376 ccttt 380  Q
    |||||    
T  7768939 ccttt 7768935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 276 - 380
Target Start/End: Complemental strand, 15186344 - 15186240
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| ||||||||||||||||||||||  ||||||||||||||||||| |||||||||| ||||||  |||||||||| ||||||||||||| ||||    
T  15186344 attattataaattaattacacaatttcaatggattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttc 15186245  T
Q  376 ccttt 380  Q
    |||||    
T  15186244 ccttt 15186240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 276 - 379
Target Start/End: Original strand, 43202468 - 43202571
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||| ||| |||||| ||||||||||||| |||||||||| |||||| ||||||||||| ||||||||||||| ||||    
T  43202468 attattataaattaattacacaattttaatgcattaattactatataatttcctttttcatacccttaactagtgccccgggggcaccggttagcatttc 43202567  T
Q  376 cctt 379  Q
    ||||    
T  43202568 cctt 43202571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 277 - 378
Target Start/End: Complemental strand, 55882783 - 55882683
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||  |||||||||||| ||||||||||| |||||    
T  55882783 ttattataaattaattacacaatttcaatgcattaattactatataatttt-tttttcatatccttaacgagtgccccggagacaccggttagcatttcc 55882685  T
Q  377 ct 378  Q
    ||    
T  55882684 ct 55882683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 277 - 377
Target Start/End: Original strand, 24679728 - 24679827
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||||||| ||| ||||||||||| |||||    
T  24679728 ttattataaattaattacacaatttcaatacattaactactatataatttcttttttcatatccttaaccagtgcccc-gagacaccggttagcatttcc 24679826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 32217145 - 32217045
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||  |||||||||| |||||| |||||| |||||    
T  32217145 ttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtgccccgggggcaccagttagcatttcc 32217046  T
Q  377 c 377  Q
    |    
T  32217045 c 32217045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 54897408 - 54897308
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||| ||||||||||| |||||||||||||||||||| |||| ||||||||||||  |||||||||| ||||||||||||| |||||    
T  54897408 ttattataaattaattatacaatttcaatgcattaactactatataatttcctttctcatatccttaaccagtgccccgggggcaccggttagcatttcc 54897309  T
Q  377 c 377  Q
    |    
T  54897308 c 54897308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 284 - 383
Target Start/End: Original strand, 18067972 - 18068071
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaa 383  Q
    |||||||||||||||||| ||| |||||||||||||||||||| |||||||||| ||||||  |||||||||| ||||||||||||| ||||||| ||||    
T  18067972 aaattaattacacaattttaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccctataaa 18068071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 276 - 378
Target Start/End: Original strand, 4268907 - 4269009
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||||| ||| |||||||||| ||||||  |||||||||| ||||||||||||| ||||    
T  4268907 attattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttc 4269006  T
Q  376 cct 378  Q
    |||    
T  4269007 cct 4269009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 277 - 378
Target Start/End: Complemental strand, 49915259 - 49915158
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||| || | ||| |||||| || |||||    
T  49915259 ttattataaattaattacacaatttcaatacattaattactatataaatttctttttcatatccttaatcagtgcaccaggggcgccggtttgcatttcc 49915160  T
Q  377 ct 378  Q
    ||    
T  49915159 ct 49915158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 277 - 370
Target Start/End: Complemental strand, 50619186 - 50619093
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagc 370  Q
    |||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||  ||||| ||||||    
T  50619186 ttattataaattaagtacacaatttcaatgcattaactactatataattttctttttcatattcttaatcagtgccccgggagcaccagttagc 50619093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 4220295 - 4220195
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||   || ||||| ||||| |||||| | |||||    
T  4220295 ttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaacccgtaccccgaaggcatcggttatcatttcc 4220196  T
Q  377 c 377  Q
    |    
T  4220195 c 4220195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 277 - 380
Target Start/End: Complemental strand, 29591289 - 29591186
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||| |||||||||||||| |||||||||||||||||||| ||| ||||||| |||||  |||||||||| |||||| |||||| |||||    
T  29591289 ttattataaattaagtacacaatttcaatgcattaactactatataatttccttattcatattcttaaccagtgccccgggggcaccagttagcatttcc 29591190  T
Q  377 cttt 380  Q
    ||||    
T  29591189 cttt 29591186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 277 - 384
Target Start/End: Original strand, 42898832 - 42898939
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||  ||||||| ||| |||||| ||| | |||||    
T  42898832 ttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtgccctggaagcaccgattaacatttcc 42898931  T
Q  377 ctttaaat 384  Q
    || |||||    
T  42898932 ctataaat 42898939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 354
Target Start/End: Original strand, 54655962 - 54656039
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgcccc 354  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||  ||||||||    
T  54655962 ttattataaattaattacacaatttcaatacattaactactatataatttccttttttatatccttaaccagtgcccc 54656039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 354
Target Start/End: Original strand, 54945864 - 54945941
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgcccc 354  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||  ||||||||    
T  54945864 ttattataaattaattacacaatttcaatacattaactgctatataatttcctttttcatatccttaaccagtgcccc 54945941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 285 - 377
Target Start/End: Complemental strand, 28755712 - 28755621
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 377  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  ||||||| || | ||||||||||| ||||||    
T  28755712 aattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccctgg-gacaccggttagcatttccc 28755621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 277 - 377
Target Start/End: Original strand, 32202566 - 32202666
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||   ||||||||| | ||||||||| | |||||    
T  32202566 ttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaacccgtgccccggggacaccggttaacatttcc 32202665  T
Q  377 c 377  Q
    |    
T  32202666 c 32202666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 276 - 344
Target Start/End: Complemental strand, 37988036 - 37987968
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  37988036 attattataaattaattacacaatttcaatacattaactactatataatttcctttttcatacccttaa 37987968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 277 - 356
Target Start/End: Original strand, 30154249 - 30154327
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccgg 356  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  30154249 ttattataaattaattacataatttcaatacattaactactatataatttcctttttcatat-cttaactagtgccccgg 30154327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 380
Target Start/End: Complemental strand, 6164193 - 6164091
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||  ||||||||    |||||||||| | |||||    
T  6164193 ttattataaattaattacacaatttcaatgcattaactactatataattttc-ttttgatatccttaaccagtgccccaagagcaccggttatcatttcc 6164095  T
Q  377 cttt 380  Q
    ||||    
T  6164094 cttt 6164091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 376
Target Start/End: Original strand, 19503191 - 19503289
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||||||||||||  |||||||| |||||||||| |||||||||||||||||  ||| ||| ||| |||||||||||| |||||    
T  19503191 ttattataaattaattacacaatttcaatgtattaactagtatataatttcctttttcatatccttaaccagtacccggga-gcaccggttagcatttcc 19503289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 379
Target Start/End: Original strand, 46688291 - 46688398
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttc-----tttttcatatccttaattagtgccccggaggcaccggttagcc 371  Q
    |||||| |||||||||||||||||||||| ||||||||||| ||||||||||     ||||||||||||||||  |||||| ||| |||||| ||||||     
T  46688291 ttattataaattaattacacaatttcaatgcattaactactgtataattttctttaatttttcatatccttaaccagtgcctcgggggcaccagttagca 46688390  T
Q  372 tttccctt 379  Q
    ||||||||    
T  46688391 tttccctt 46688398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 380
Target Start/End: Original strand, 47231966 - 47232061
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttt 380  Q
    |||||||||||  |||||||| ||||||||| |||||||||| |||||||| ||||||||  ||||| |||| ||||||||||||| |||||||||    
T  47231966 aattaattacattatttcaatgcattaactattatataatttcctttttcacatccttaaccagtgctccgggggcaccggttagcatttcccttt 47232061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 53655964 - 53656031
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  53655964 ttattataaattaattacacaatttcaatacattaactattatataatttcttttttcatatccttaa 53656031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 285 - 379
Target Start/End: Original strand, 33108767 - 33108860
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 379  Q
    ||||||||| || |||||||| ||||||||| |||||||||| ||||||||||| |||||  |||||||||||||||||||||| | ||||||||    
T  33108767 aattaattatactatttcaatgcattaactattatataatttcctttttcatat-cttaaccagtgccccggaggcaccggttaacatttccctt 33108860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 285 - 387
Target Start/End: Original strand, 52533879 - 52533981
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaat 384  Q
    |||||||||  |||||||| | |||||||||||||||||||| ||||||||||| |||||  |||| || |||||||||||||| | ||||||||||| |    
T  52533879 aattaattattcaatttcagtgcattaactactatataatttcctttttcatattcttaaccagtgtcctggaggcaccggttaacatttccctttaatt 52533978  T
Q  385 tat 387  Q
    |||    
T  52533979 tat 52533981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 338
Target Start/End: Complemental strand, 36395199 - 36395138
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatat 338  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  36395199 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatat 36395138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 285 - 377
Target Start/End: Original strand, 3783595 - 3783687
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 377  Q
    ||||||||| ||||||| ||| ||||||||||||||||||||  ||||||||||  ||||   ||||||||||||||||||||||| ||||||    
T  3783595 aattaattaaacaattttaatgcattaactactatataatttcatttttcatatgtttaaccggtgccccggaggcaccggttagcatttccc 3783687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 244 - 377
Target Start/End: Complemental strand, 54054693 - 54054548
Alignment:
Q  244 cgggacactggttaagcataccataaaaggaaa------------ttattacaaattaattacacaatttcaatacattaactactatataattttcttt 331  Q
    |||| ||||||||||||||||||||||||||||            ||||||  |||||||||||| |||||||| ||||||||| ||||||||||  |||    
T  54054693 cggggcactggttaagcataccataaaaggaaattgtttttgactttattatcaattaattacactatttcaatgcattaactattatataatttctttt 54054594  T
Q  332 ttcatatccttaattagtgccccggaggcaccggttagcctttccc 377  Q
    |||||||||||||   ||||||| | ||||||||||||| ||||||    
T  54054593 ttcatatccttaaccggtgcccccggggcaccggttagcatttccc 54054548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 39844007 - 39843940
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||||| ||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  39844007 ttattataaattaattacataatttcaatgcattaactactatataatttcatttttcatatccttaa 39843940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 42815209 - 42815142
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||||| |||||||||||||||||||  ||||||||| |||||||||||||||||    
T  42815209 ttattataaattaattacataatttcaatacattaactatgatataatttcctttttcatatccttaa 42815142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 378
Target Start/End: Complemental strand, 50167682 - 50167590
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 378  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||||||||||| ||||  |||||||||    ||||||||||| |||||||    
T  50167682 aaattaattacacaatttcaatgcattaactac--tataattttctttttcatatctttaaccagtgccccgagaacaccggttagcatttccct 50167590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 379
Target Start/End: Original strand, 5091696 - 5091798
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||| |||| ||||| || ||||||||||| |||||||||| |||||  ||||||||||  | |||||||||  |||||    
T  5091696 ttattataaattaattacacaattttaatatattaattattatataattttatttttcatattcttaaccagtgccccgggagtaccggttagtatttcc 5091795  T
Q  377 ctt 379  Q
    |||    
T  5091796 ctt 5091798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 379
Target Start/End: Complemental strand, 12356344 - 12356242
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||| | |||||||||  ||||||||||||||||||| |||||||||||||||||  |||  | | | ||||||||||||| |||||    
T  12356344 ttattataaattaattatataatttcaatgtattaactactatataatttcctttttcatatccttaaccagtatctcaggggcaccggttagcatttcc 12356245  T
Q  377 ctt 379  Q
    |||    
T  12356244 ctt 12356242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 284 - 381
Target Start/End: Complemental strand, 41265552 - 41265455
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttta 381  Q
    |||||||||||||||||||| | |||||||||||||||||||||| ||||  ||| ||||| ||||| ||||| | ||||| ||| | ||||||||||    
T  41265552 aaattaattacacaatttcactgcattaactactatataattttcattttagtatgcttaactagtgtcccggggacaccgattaacatttcccttta 41265455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 30387220 - 30387269
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattt 326  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  30387220 ttattataaattaattacacaatttcaatgcattaactactatataattt 30387269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 31680549 - 31680616
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||| ||||||||||| ||||||||| ||| ||| ||||||||||||| ||||||    
T  31680549 ttattataaattaattatacaatttcaatgcattaactattatgtaactttctttttcatacccttaa 31680616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 379
Target Start/End: Complemental strand, 46149039 - 46148939
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||||||||||||  ||||| || |||||||||| ||||||||||| ||||   | |||||  | ||||||||||||| |||||    
T  46149039 ttattataaattaattacacaatttcaatgtattaattattatataatttcctttttcatattcttatcaaatgccc--ggggcaccggttagcatttcc 46148942  T
Q  377 ctt 379  Q
    |||    
T  46148941 ctt 46148939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 16821040 - 16820977
Alignment:
Q  224 tagggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattattac 283  Q
    |||||||||||||| ||||||    ||| |||||||||||||||||||||||||||||||||||    
T  16821040 tagggtcctgctaaccggtgcccccggggcactggttaagcataccataaaaggaaattattac 16820977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 283
Target Start/End: Complemental strand, 54897494 - 54897433
Alignment:
Q  226 gggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattattac 283  Q
    |||||||||||| ||||||    |||||||||||||| ||||||||||||||||||||||||    
T  54897494 gggtcctgctaaccggtgcctccgggacactggttaaacataccataaaaggaaattattac 54897433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 313
Target Start/End: Original strand, 39877335 - 39877371
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaac 313  Q
    |||||| ||||||||||||||||||||||||||||||    
T  39877335 ttattataaattaattacacaatttcaatacattaac 39877371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 50603328 - 50603272
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttt 332  Q
    ||||||| |||||||||||||||||||||| |||||| || |||| ||||| |||||    
T  50603328 attattataaattaattacacaatttcaatgcattaattattatacaatttcctttt 50603272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 344
Target Start/End: Complemental strand, 52697121 - 52697085
Alignment:
Q  308 attaactactatataattttctttttcatatccttaa 344  Q
    |||||||||||||||||||| ||||||||||||||||    
T  52697121 attaactactatataattttgtttttcatatccttaa 52697085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 29591386 - 29591314
Alignment:
Q  215 tatttaaattagggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattattac 283  Q
    ||||| ||| ||||||||||||| ||||||    ||| |||| |||||||||||||||||||| |||||||||    
T  29591386 tattttaataagggtcctgctaaccggtgcccccggggcactagttaagcataccataaaaggtaattattac 29591314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 378
Target Start/End: Original strand, 10110147 - 10110189
Alignment:
Q  336 tatccttaattagtgccccggaggcaccggttagcctttccct 378  Q
    |||||||||| |||| ||||||||||||||||||| |||||||    
T  10110147 tatccttaatcagtgtcccggaggcaccggttagcatttccct 10110189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 50619245 - 50619211
Alignment:
Q  249 cactggttaagcataccataaaaggaaattattac 283  Q
    ||||||||||||||||||||||||| |||||||||    
T  50619245 cactggttaagcataccataaaagggaattattac 50619211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 326
Target Start/End: Complemental strand, 53268813 - 53268771
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattt 326  Q
    |||||||||||||||||| ||| ||||||||| ||||||||||    
T  53268813 aaattaattacacaattttaatgcattaactaatatataattt 53268771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 789558 - 789591
Alignment:
Q  250 actggttaagcataccataaaaggaaattattac 283  Q
    |||||||||||||||||||||||| |||||||||    
T  789558 actggttaagcataccataaaagggaattattac 789591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Complemental strand, 36395258 - 36395225
Alignment:
Q  249 cactggttaagcataccataaaaggaaattatta 282  Q
    ||||||||||||||||||||||||| ||||||||    
T  36395258 cactggttaagcataccataaaagggaattatta 36395225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 308 - 344
Target Start/End: Original strand, 1432659 - 1432695
Alignment:
Q  308 attaactactatataattttctttttcatatccttaa 344  Q
    |||||||| |||||||||| |||||||||||||||||    
T  1432659 attaactattatataatttcctttttcatatccttaa 1432695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 226 - 283
Target Start/End: Original strand, 4268822 - 4268883
Alignment:
Q  226 gggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattattac 283  Q
    |||||||||||| ||||||    ||| |||||||||| |||||||||||||| |||||||||    
T  4268822 gggtcctgctaaccggtgccctcggggcactggttaatcataccataaaagggaattattac 4268883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 285 - 325
Target Start/End: Complemental strand, 31517257 - 31517217
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataatt 325  Q
    |||||||||||| |||||||| ||||||||| |||||||||    
T  31517257 aattaattacactatttcaatgcattaactattatataatt 31517217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 276 - 390
Target Start/End: Complemental strand, 12525820 - 12525706
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||| |||||||  ||||||||||||||||||| |||||||||| ||||||  ||| |||||||||||||||||||| ||||    
T  12525820 attattataaattaattacacattttcaatgtattaactactatataatttcctttttcatacccttaaccagtaccccggaggcaccggttagcatttc 12525721  T
Q  376 cctttaaattattgt 390  Q
    |||||||||||||||    
T  12525720 cctttaaattattgt 12525706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 276 - 384
Target Start/End: Complemental strand, 3515867 - 3515759
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||  ||||||| || ||||||||||||| ||||    
T  3515867 attattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccctgggggcaccggttagcatttc 3515768  T
Q  376 cctttaaat 384  Q
    |||||||||    
T  3515767 cctttaaat 3515759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 277 - 375
Target Start/End: Complemental strand, 2350752 - 2350654
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||  |||||||||||| ||||    
T  2350752 ttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaaccagtgccccgggagcaccggttagcatttc 2350654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 276 - 377
Target Start/End: Complemental strand, 392197 - 392096
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||  |||||||||| ||||||||||||| ||||    
T  392197 attattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttc 392098  T
Q  376 cc 377  Q
    ||    
T  392097 cc 392096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 277 - 377
Target Start/End: Original strand, 23629662 - 23629761
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||| | |||||    
T  23629662 ttattataaagtaattacacaatttcaatacattaactactatataattttctttttcatatccttaatcagtgccccgg-ggcatcggttaacatttcc 23629760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 277 - 379
Target Start/End: Original strand, 1391264 - 1391365
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||| ||| ||||||| |||||||||||| |||||    
T  1391264 ttattataaattaattatacaatttcaatgcattaactactatataatttcctttttcatatccttaatcagtaccccgga-gcaccggttagcatttcc 1391362  T
Q  377 ctt 379  Q
    |||    
T  1391363 ctt 1391365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 277 - 379
Target Start/End: Original strand, 7851245 - 7851347
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||  ||||||| || ||||||||||||| |||||    
T  7851245 ttattataaattaattacacaattttaatgcattaattactatataattttctttttcatatccttaaccagtgccctgggggcaccggttagcatttcc 7851344  T
Q  377 ctt 379  Q
    |||    
T  7851345 ctt 7851347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 285 - 379
Target Start/End: Complemental strand, 20898040 - 20897946
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 379  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  ||||||| || ||||||||||||| ||||||||    
T  20898040 aattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccctgggggcaccggttagcatttccctt 20897946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 277 - 379
Target Start/End: Complemental strand, 23402238 - 23402136
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||| |||||||||||| |||||| ||||||||||||| |||||||||||||||||  ||||||||||||||||| |||||| |||||    
T  23402238 ttattataaattaatttcacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgccccggaggcaccagttagcatttcc 23402139  T
Q  377 ctt 379  Q
    |||    
T  23402138 ctt 23402136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 277 - 377
Target Start/End: Original strand, 12145203 - 12145303
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  ||||| | || ||||||||||||| |||||    
T  12145203 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacaagtgcactgggggcaccggttagcatttcc 12145302  T
Q  377 c 377  Q
    |    
T  12145303 c 12145303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 284 - 383
Target Start/End: Complemental strand, 27433585 - 27433486
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaa 383  Q
    |||||||||||||||||| ||| |||||||||||||||||||| |||||||||| ||||||  |||||||||| ||||||||||||| ||||||| ||||    
T  27433585 aaattaattacacaattttaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccctataaa 27433486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 277 - 379
Target Start/End: Original strand, 34396613 - 34396715
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||   ||| || || ||||||||||||| |||||    
T  34396613 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacctgtgtcctgggggcaccggttagcatttcc 34396712  T
Q  377 ctt 379  Q
    |||    
T  34396713 ctt 34396715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 276 - 353
Target Start/End: Original strand, 13417047 - 13417124
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccc 353  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||    
T  13417047 attattataaattaattacacaatttcaatacattaactaatatataatttcctttttcatatccttaactagtgccc 13417124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 277 - 382
Target Start/End: Original strand, 32929594 - 32929699
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||| || |||||||||| |||||||||| ||||||  | |||||||| ||||||||||||| |||||    
T  32929594 ttattataaattaattacacaatttcaatgcattaattaatatataatttcctttttcatacccttaaccattgccccgggggcaccggttagcatttcc 32929693  T
Q  377 ctttaa 382  Q
    ||||||    
T  32929694 ctttaa 32929699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 278 - 378
Target Start/End: Complemental strand, 13529554 - 13529454
Alignment:
Q  278 tattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 377  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||  ||||||||| ||||||  |||||| ||||||    
T  13529554 tattataaattaattacacaatttcaatgcattaactactatataatttcctttttcacatccttaaccagtgccccgaaggcacaagttagcatttccc 13529455  T
Q  378 t 378  Q
    |    
T  13529454 t 13529454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 277 - 377
Target Start/End: Original strand, 21878433 - 21878533
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||| | ||||||||| |||||||||||||||||||| |||||||||||||||||   |||||| |||||||||||||||| |||||    
T  21878433 ttattataaattaattaaataatttcaatgcattaactactatataatttcctttttcatatccttaacccgtgcccgggaggcaccggttagcatttcc 21878532  T
Q  377 c 377  Q
    |    
T  21878533 c 21878533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 276 - 379
Target Start/End: Complemental strand, 4215796 - 4215693
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| ||||||||| |||||||||| ||||||||||  |||||  |||||||||| ||||||||||| | ||||    
T  4215796 attattataaattaattacacaatttcaatgcattaactattatataatttcctttttcatactcttaaccagtgccccgggggcaccggttaacatttc 4215697  T
Q  376 cctt 379  Q
    ||||    
T  4215696 cctt 4215693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 277 - 367
Target Start/End: Original strand, 32985279 - 32985369
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggtt 367  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||  | |||||||  ||||||||||    
T  32985279 ttattataaattaattacacaatttcaatacattaactactatataatttccttttttatatccttaaccaatgccccgagggcaccggtt 32985369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 378
Target Start/End: Original strand, 29451201 - 29451301
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| || ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||   ||| |||||||||||| |||||| |||||    
T  29451201 ttattataatttaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccggtg-cccggaggcaccagttagcatttcc 29451299  T
Q  377 ct 378  Q
    ||    
T  29451300 ct 29451301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 29978332 - 29978233
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||  |||||| |||||||||||||||| ||||||||||||| ||||||||||||||||| |||||  |||||||||||||||||| |||||    
T  29978332 ttattataaatatattacataatttcaatacattaaatactatataatttcctttttcatatccttaactagtg-tccggaggcaccggttagcatttcc 29978234  T

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Target: chr6; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 277 - 380
Target Start/End: Original strand, 18276701 - 18276803
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||  ||||||| || |||||| |||| | |||||    
T  18276701 ttattataaattaattacacaaattcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccagg-ggcaccagttaacatttcc 18276799  T
Q  377 cttt 380  Q
    ||||    
T  18276800 cttt 18276803  T

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Target: chr6; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 26467210 - 26467277
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  26467210 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaa 26467277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 276 - 378
Target Start/End: Complemental strand, 31280422 - 31280320
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||| ||||||||||| |||||||||||||||||||| |||||||||   |||||| |||||| |||  |||||||||||| ||||    
T  31280422 attattataaattaattatacaatttcaatgcattaactactatataatttcctttttcattctcttaatcagtgcctcgggagcaccggttagcatttc 31280323  T
Q  376 cct 378  Q
    |||    
T  31280322 cct 31280320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 285 - 353
Target Start/End: Original strand, 34477644 - 34477712
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccc 353  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  |||||||    
T  34477644 aattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccc 34477712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 25165499 - 25165566
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  25165499 ttattataaattaattacacaatttcaatatattaactactatataatttcttttttcatatccttaa 25165566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 28225320 - 28225221
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||   ||  ||| |||||||| |||||| |||||    
T  28225320 ttattataaattaattacacaatttcaatacattaattactatataa-ttcctttttcatatccttaacccgtatcccagaggcaccagttagcatttcc 28225222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 276 - 382
Target Start/End: Original strand, 3026094 - 3026198
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||| ||||||||||| ||||||||||| ||||||||  ||||||||| ||||||  |||||||  | |||||| |||||| ||||    
T  3026094 attattataaattaattatacaatttcaatgcattaactactgtataatttcatttttcatacccttaaccagtgccc--ggggcaccagttagcatttc 3026191  T
Q  376 cctttaa 382  Q
    |||||||    
T  3026192 cctttaa 3026198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 34851935 - 34852002
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||| ||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||    
T  34851935 ttattataaatcaattacacaatttcaatgcattaactactatataatttcctttttcatatctttaa 34852002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 2581052 - 2580952
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||| ||||||||| |||||||||||||||||||| |||||| ||||| ||||  ||| || |   ||||||||||||| |||||    
T  2581052 ttattataaattaattacataatttcaatgcattaactactatataatttccttttttatatcattaaccagtacctcaagggcaccggttagcatttcc 2580953  T
Q  377 c 377  Q
    |    
T  2580952 c 2580952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 276 - 344
Target Start/End: Original strand, 11115180 - 11115248
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    ||||||| ||||||||||||||||||||||  |||||||| |||||||||| |||||| ||||||||||    
T  11115180 attattataaattaattacacaatttcaatgtattaactattatataatttccttttttatatccttaa 11115248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 375
Target Start/End: Complemental strand, 9661079 - 9660988
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    |||||||||| ||||||||||| ||||||||| ||| ||||||  |||||||||||||||| | ||||| ||  ||||||||||||| ||||    
T  9661079 aaattaattatacaatttcaatgcattaactattatgtaatttcttttttcatatccttaactggtgccacgagggcaccggttagcatttc 9660988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 35043989 - 35043890
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||| |||||||||||||  |||||||||||||||||||  ||||||||||||||||  |||| ||||  | |||| |||||| |||||    
T  35043989 ttattataaattaat-acacaatttcaatgaattaactactatataatttcttttttcatatccttaaccagtgtcccgtggacaccagttagcatttcc 35043891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 1840333 - 1840400
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||||||||||| |||||||||| || ||||||||||  ||||| ||||||||||    
T  1840333 ttattataaattaattacacaattttaatacattaattattatataatttctttttttatatccttaa 1840400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 335
Target Start/End: Complemental strand, 961101 - 961051
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttca 335  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||||||||    
T  961101 aattaattacacaattttaatgcattaactactatataatttcctttttca 961051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 14559992 - 14559920
Alignment:
Q  307 cattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 379  Q
    ||||||||| |||||| |||  ||||||||||| ||||| ||| ||||| |||||||||||||| ||||||||    
T  14559992 cattaactattatatattttcttttttcatatctttaatcagttccccgaaggcaccggttagcatttccctt 14559920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 283
Target Start/End: Complemental strand, 4215859 - 4215820
Alignment:
Q  244 cgggacactggttaagcataccataaaaggaaattattac 283  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  4215859 cggggcactggttaagcataccataaaaggaaattattac 4215820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 351
Target Start/End: Complemental strand, 5323500 - 5323426
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgc 351  Q
    |||||| |||||||||||| ||||| ||| | |||| ||||||||||||| |||||| |||| |||||| |||||    
T  5323500 ttattataaattaattacataattttaatgctttaattactatataatttccttttttatattcttaatcagtgc 5323426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 283
Target Start/End: Original strand, 32929498 - 32929569
Alignment:
Q  216 atttaaattagggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattattac 283  Q
    |||||| | ||||||||||||| ||||||    ||| ||||||||||||||||||||||||| |||||||||    
T  32929498 atttaattaagggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattac 32929569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 282
Target Start/End: Original strand, 1391204 - 1391238
Alignment:
Q  248 acactggttaagcataccataaaaggaaattatta 282  Q
    |||||||||||||||||||||||||| ||||||||    
T  1391204 acactggttaagcataccataaaagggaattatta 1391238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 32985215 - 32985253
Alignment:
Q  244 cgggacactggttaagcataccataaaaggaaattatta 282  Q
    |||| ||||||||||||||||||||||||| ||||||||    
T  32985215 cggggcactggttaagcataccataaaagggaattatta 32985253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 392283 - 392221
Alignment:
Q  225 agggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattattac 283  Q
    ||||||||||||| ||||||    ||| ||||||||||||||||||||||||  |||||||||    
T  392283 agggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagagaattattac 392221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 12145144 - 12145177
Alignment:
Q  249 cactggttaagcataccataaaaggaaattatta 282  Q
    |||||||||||||||| |||||||||||||||||    
T  12145144 cactggttaagcatactataaaaggaaattatta 12145177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 23402325 - 23402263
Alignment:
Q  225 agggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattattac 283  Q
    ||||||||||||| ||||||    ||| ||| ||||||||||||||||||||| |||||||||    
T  23402325 agggtcctgctaaccggtgcctccggggcacgggttaagcataccataaaaggtaattattac 23402263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 377
Target Start/End: Original strand, 34712271 - 34712312
Alignment:
Q  336 tatccttaattagtgccccggaggcaccggttagcctttccc 377  Q
    |||||||||  |||||||||||||||||||||||| ||||||    
T  34712271 tatccttaaccagtgccccggaggcaccggttagcatttccc 34712312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 1e-33; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 277 - 378
Target Start/End: Complemental strand, 272320 - 272219
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  |||||||||| ||||||||||||| |||||    
T  272320 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttcc 272221  T
Q  377 ct 378  Q
    ||    
T  272220 ct 272219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 276 - 381
Target Start/End: Complemental strand, 52520782 - 52520677
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||  |||||||||| ||||||||||||| ||||    
T  52520782 attattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttc 52520683  T
Q  376 ccttta 381  Q
    ||||||    
T  52520682 ccttta 52520677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 4168283 - 4168183
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||  ||| |||||||||||||||||||| |||||    
T  4168283 ttattataaattaattacacaatttcaatacattaactactatataatttccttttttatatccttaaccagttccccggaggcaccggttagcatttcc 4168184  T
Q  377 c 377  Q
    |    
T  4168183 c 4168183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 287 - 380
Target Start/End: Complemental strand, 18014762 - 18014669
Alignment:
Q  287 ttaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttt 380  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||| |||||| |||||| |||||||||    
T  18014762 ttaattacacaatttcaatgcattaactactatataatttactttttcatatccttaatcagtgccccgggggcaccagttagcatttcccttt 18014669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 276 - 377
Target Start/End: Complemental strand, 39074520 - 39074419
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||  |||||||||| ||||||||||||| ||||    
T  39074520 attattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttc 39074421  T
Q  376 cc 377  Q
    ||    
T  39074420 cc 39074419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 276 - 377
Target Start/End: Complemental strand, 43786972 - 43786871
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||| | ||||  |||||||||||||||||||||||| ||||    
T  43786972 attattataaattaattacacaatttcaatgcattaactactatataatttcctttttcataccattaaccagtgccccggaggcaccggttagcatttc 43786873  T
Q  376 cc 377  Q
    ||    
T  43786872 cc 43786871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 285 - 380
Target Start/End: Complemental strand, 46352726 - 46352631
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttt 380  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||  |||||||||| ||||||||||||| |||||||||    
T  46352726 aattaattacacaatttcaatgcattaactactgtataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttcccttt 46352631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 285 - 379
Target Start/End: Original strand, 40362674 - 40362768
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 379  Q
    ||||||||||||||||| ||| ||||||||||||||||||||  ||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  40362674 aattaattacacaattttaatgcattaactactatataatttcttttttcatatccttaatcagtgccccggaggcacgggttagcatttccctt 40362768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 276 - 377
Target Start/End: Complemental strand, 20924093 - 20923992
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| ||||||||||||||||||||||  ||||||||||||||||||| |||||||||| ||||||  ||||||||||| |||||||||||| ||||    
T  20924093 attattataaattaattacacaatttcaatgaattaactactatataatttcctttttcatacccttaaccagtgccccggaagcaccggttagcatttc 20923994  T
Q  376 cc 377  Q
    ||    
T  20923993 cc 20923992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 277 - 378
Target Start/End: Complemental strand, 49893431 - 49893330
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| | |||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||  |||||||||| ||||||||||||| |||||    
T  49893431 ttattatagattaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttcc 49893332  T
Q  377 ct 378  Q
    ||    
T  49893331 ct 49893330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 285 - 379
Target Start/End: Complemental strand, 858681 - 858587
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 379  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||| | || |||||||||| || ||||||||    
T  858681 aattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaactagtgcactgggggcaccggtttgcatttccctt 858587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 285 - 377
Target Start/End: Complemental strand, 48725363 - 48725271
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 377  Q
    ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||  |||||||| | ||||||||||||| ||||||    
T  48725363 aattaattacacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgcccccggggcaccggttagcatttccc 48725271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 52246682 - 52246582
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||| ||||||||||| ||||||| ||||||||||||  ||||||||||||||||  ||||||||||||||||| |||||| |||||    
T  52246682 ttattataaattaattatacaatttcaatgcattaacaactatataatttcatttttcatatccttaaccagtgccccggaggcaccagttagcatttcc 52246583  T
Q  377 c 377  Q
    |    
T  52246582 c 52246582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 370
Target Start/End: Original strand, 41554026 - 41554118
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagc 370  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  ||||| |||| |||||| ||||||    
T  41554026 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcaccgg-ggcaccagttagc 41554118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 285 - 353
Target Start/End: Complemental strand, 22248978 - 22248910
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccc 353  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||    
T  22248978 aattaattacacaatttcaatacaataactactatataatttcctttttcatatccttaactagtgccc 22248910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 295 - 378
Target Start/End: Complemental strand, 41304087 - 41304004
Alignment:
Q  295 acaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 378  Q
    ||||||||||| |||||| ||||||||||||| |||||||||||||||||  | |||||||||||||||||||||| |||||||    
T  41304087 acaatttcaatgcattaattactatataatttcctttttcatatccttaaccactgccccggaggcaccggttagcatttccct 41304004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 277 - 368
Target Start/End: Original strand, 42964335 - 42964426
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggtta 368  Q
    |||||| |||||||||||||||||||||| |||||||||||||| |||||  ||||||||||||||||  ||||||||||| ||||| ||||    
T  42964335 ttattataaattaattacacaatttcaatgcattaactactataaaatttcatttttcatatccttaaccagtgccccggaagcaccagtta 42964426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 276 - 384
Target Start/End: Original strand, 53489909 - 53490019
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgcccc--ggaggcaccggttagcctt 373  Q
    ||||||| |||||||||||||||||| ||| |||||||||||||||||||| |||||||||| ||||||  ||||||||  || ||||||| ||||| ||    
T  53489909 attattataaattaattacacaattttaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggggcaccgattagcatt 53490008  T
Q  374 tccctttaaat 384  Q
    |||| ||||||    
T  53490009 tcccattaaat 53490019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 285 - 379
Target Start/End: Complemental strand, 13159989 - 13159895
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 379  Q
    |||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||| |||  |||| |  |||||||||||| ||||||||    
T  13159989 aattaattacacaatttcaatgtattaactactatataatttcctttttcatatccttaactagaaccccaggagcaccggttagcatttccctt 13159895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 285 - 370
Target Start/End: Original strand, 50395656 - 50395741
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagc 370  Q
    |||||||||||||||||| || ||||||||||| |||||||||||||||||||||| |||  |||| ||||| |||||||||||||    
T  50395656 aattaattacacaatttctatgcattaactactgtataattttctttttcatatccctaaccagtgtcccgggggcaccggttagc 50395741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 277 - 377
Target Start/End: Original strand, 10617370 - 10617469
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||| ||| |||||||||||||||||||| |||||| ||||||||||| ||||  |||| ||||||||||| | |||||    
T  10617370 ttattataaattaattacacaattttaatgcattaactactatataatttccttttttatatccttaatcagtg-tccgggggcaccggttaacatttcc 10617468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 277 - 356
Target Start/End: Original strand, 49529352 - 49529434
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactacta---tataattttctttttcatatccttaattagtgccccgg 356  Q
    |||||| |||||||||||| ||||||||| ||||||||||||   ||||||||||||||||||||||||||| ||||||||||    
T  49529352 ttattataaattaattacataatttcaatgcattaactactagtatataattttctttttcatatccttaatcagtgccccgg 49529434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 368
Target Start/End: Original strand, 43269825 - 43269916
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggtta 368  Q
    |||||| |||||||||||| ||||||||| ||||||||||||| |||||| | |||||||||||||||  ||||| ||| ||||||||||||    
T  43269825 ttattataaattaattacataatttcaatgcattaactactatgtaatttcccttttcatatccttaaccagtgctccgaaggcaccggtta 43269916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 285 - 379
Target Start/End: Original strand, 11308304 - 11308398
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 379  Q
    |||||||||||  |||||||| ||||||||| |||||||||| |||||||| ||||||||| |||| ||||||  ||||||||||| ||||||||    
T  11308304 aattaattacattatttcaatgcattaactattatataatttcctttttcacatccttaatcagtgtcccggaaacaccggttagcatttccctt 11308398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 277 - 339
Target Start/End: Complemental strand, 31514891 - 31514829
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatc 339  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  31514891 ttattataaattaattacacaattttaatacattaactactatataattttatttttcatatc 31514829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 354
Target Start/End: Complemental strand, 29241737 - 29241660
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgcccc 354  Q
    |||||| |||||||||||| ||||||||| |||||||||||||||||||| | ||||||||||||||| | |||||||    
T  29241737 ttattataaattaattacataatttcaatgcattaactactatataatttccattttcatatccttaactggtgcccc 29241660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 2119531 - 2119431
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||| |||||||||| |||||||||||||||||||| |||||||||||| ||||  |||||| ||  | ||||||||| | |||||    
T  2119531 ttattataaattaattactcaatttcaatgcattaactactatataatttcctttttcatatctttaaccagtgcctcgaggacaccggttaacatttcc 2119432  T
Q  377 c 377  Q
    |    
T  2119431 c 2119431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 7468511 - 7468444
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||| ||||||||||| |||||||||||||||||||| ||||||||| |||||||    
T  7468511 ttattataaattaattatacaatttcaatgcattaactactatataatttcctttttcatttccttaa 7468444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 28139409 - 28139309
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||| ||||||||||| ||||||||||||| ||||||  ||||||||||||||||  |||| |  || |||||| |||||| |||||    
T  28139409 ttattataaattaattatacaatttcaatgcattaactactatttaatttcttttttcatatccttaaccagtgtcttgggggcaccagttagcatttcc 28139310  T
Q  377 c 377  Q
    |    
T  28139309 c 28139309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 42548195 - 42548096
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||| ||||||||| ||||||||||||||||||||  ||||||||||| ||||  |||||| | |||||| ||| |||| |||||    
T  42548195 ttattataaattaattacataatttcaatgcattaactactatataatttcttttttcatatctttaagcagtgcctc-gaggcatcggctagcatttcc 42548097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 50299031 - 50299099
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaat 345  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||||||| |||| ||||| |||||    
T  50299031 ttattataaattaattacacaatttcagtgcattaactactatataattttcctttttatatctttaat 50299099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 51818981 - 51819061
Alignment:
Q  297 aatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 377  Q
    |||||||||||| ||||||||| ||||||||||||||  |||||||||| |||||||| |||||| | |||||| ||||||    
T  51818981 aatttcaatacaataactactaaataattttctttttagtatccttaatcagtgccccagaggcatcagttagcatttccc 51819061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 285 - 344
Target Start/End: Complemental strand, 2505441 - 2505382
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    ||||||||||||||||||||| || ||||||||||||||||| |||||||||||| ||||    
T  2505441 aattaattacacaatttcaatgcactaactactatataatttcctttttcatatctttaa 2505382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 2938126 - 2938193
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||| ||||||||||| | ||||||||||||||||||||||||||| ||||| ||||    
T  2938126 ttattataaattaatcacacaatttcagtgcattaactactatataattttcttttttatatctttaa 2938193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 370
Target Start/End: Original strand, 50359272 - 50359364
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagc 370  Q
    |||||| | ||||||||| |||||||||| ||||||||||||||||||||| |||||| || ||||||  |||||| ||| |||||| ||||||    
T  50359272 ttattatatattaattacccaatttcaatgcattaactactatataattttttttttcttaaccttaaccagtgccacgg-ggcaccagttagc 50359364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 41993705 - 41993772
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||||| ||||||||| ||||||||||||||||||||  ||||| |||| |||||    
T  41993705 ttattataaattaattacataatttcaatgcattaactactatataatttcatttttaatatacttaa 41993772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 296 - 354
Target Start/End: Complemental strand, 2391688 - 2391630
Alignment:
Q  296 caatttcaatacattaactactatataattttctttttcatatccttaattagtgcccc 354  Q
    |||||||||| |||||||||||||||||||| ||||||| |||||||||  ||||||||    
T  2391688 caatttcaatgcattaactactatataatttcctttttcttatccttaaccagtgcccc 2391630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 296 - 354
Target Start/End: Complemental strand, 2393449 - 2393391
Alignment:
Q  296 caatttcaatacattaactactatataattttctttttcatatccttaattagtgcccc 354  Q
    |||||||||| |||||||||||||||||||| ||||||| |||||||||  ||||||||    
T  2393449 caatttcaatgcattaactactatataatttcctttttcttatccttaaccagtgcccc 2393391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 277 - 325
Target Start/End: Complemental strand, 33140985 - 33140937
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataatt 325  Q
    |||||| |||||||||| ||||||||||| |||||||||||||||||||    
T  33140985 ttattataaattaattatacaatttcaatgcattaactactatataatt 33140937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 38852317 - 38852247
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacatta---actactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||||||||||||||| |||||   |||||||||||||||  ||||| ||||||||||    
T  38852317 ttattataaattaattacacaatttcaatgcattaattactactatataatttcattttttatatccttaa 38852247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 292 - 344
Target Start/End: Complemental strand, 52718252 - 52718200
Alignment:
Q  292 tacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||||||| |||  ||||||||||||||||||| |||||||||||||||||    
T  52718252 tacacaattttaatgtattaactactatataatttcctttttcatatccttaa 52718200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 39074605 - 39074543
Alignment:
Q  225 agggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattattac 283  Q
    ||||||||||||| ||||||    ||| ||||||||||||||||||||||||| |||||||||    
T  39074605 agggtcctgctaaccggtgcccctggggcactggttaagcataccataaaagggaattattac 39074543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 283
Target Start/End: Complemental strand, 858753 - 858714
Alignment:
Q  244 cgggacactggttaagcataccataaaaggaaattattac 283  Q
    |||| ||| |||||||||||||||||||||||||||||||    
T  858753 cggggcacgggttaagcataccataaaaggaaattattac 858714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 320
Target Start/End: Complemental strand, 6842719 - 6842676
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactata 320  Q
    |||||| |||||||||||||||||||||| ||||||||| ||||    
T  6842719 ttattataaattaattacacaatttcaatgcattaactattata 6842676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 283
Target Start/End: Complemental strand, 41304159 - 41304128
Alignment:
Q  252 tggttaagcataccataaaaggaaattattac 283  Q
    ||||||||||||||||||||||||||||||||    
T  41304159 tggttaagcataccataaaaggaaattattac 41304128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 283
Target Start/End: Complemental strand, 48725435 - 48725396
Alignment:
Q  244 cgggacactggttaagcataccataaaaggaaattattac 283  Q
    |||| ||||||||||||||||||||||||| |||||||||    
T  48725435 cggggcactggttaagcataccataaaagggaattattac 48725396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 316
Target Start/End: Complemental strand, 6842642 - 6842604
Alignment:
Q  278 tattacaaattaattacacaatttcaatacattaactac 316  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  6842642 tattataaattaattacacaatttcaatgcattaactac 6842604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 11308209 - 11308264
Alignment:
Q  224 tagggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaa 275  Q
    |||||||||||||||||||||    ||| || ||||||||||||||||||||||||    
T  11308209 tagggtcctgctaatcggtgcccctggggcattggttaagcataccataaaaggaa 11308264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 18014836 - 18014798
Alignment:
Q  244 cgggacactggttaagcataccataaaaggaaattatta 282  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  18014836 cggggcactgattaagcataccataaaaggaaattatta 18014798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 42548254 - 42548220
Alignment:
Q  249 cactggttaagcataccataaaaggaaattattac 283  Q
    ||||||||||||||||||||||||| |||||||||    
T  42548254 cactggttaagcataccataaaagggaattattac 42548220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 49529293 - 49529327
Alignment:
Q  249 cactggttaagcataccataaaaggaaattattac 283  Q
    |||||||||| ||||||||||||||||||||||||    
T  49529293 cactggttaaacataccataaaaggaaattattac 49529327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 52246742 - 52246708
Alignment:
Q  249 cactggttaagcataccataaaaggaaattattac 283  Q
    |||| ||||||||||||||||||||||||||||||    
T  52246742 cactagttaagcataccataaaaggaaattattac 52246708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 354
Target Start/End: Complemental strand, 24488458 - 24488389
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgcccc 354  Q
    |||||||||||| ||||| || ||||||||| |||||||||| |||||| | || |||||  ||||||||    
T  24488458 aattaattacactatttccatgcattaactattatataatttccttttttacattcttaaccagtgcccc 24488389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 25743967 - 25743934
Alignment:
Q  250 actggttaagcataccataaaaggaaattattac 283  Q
    ||||||||||||||||| ||||||||||||||||    
T  25743967 actggttaagcataccaaaaaaggaaattattac 25743934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 40362579 - 40362641
Alignment:
Q  225 agggtcctgctaatcggt----gcgggacactggttaagcataccataaaaggaaattattac 283  Q
    ||||||||||||||||||     |||| ||||||||||||||||||||||||  |||||||||    
T  40362579 agggtcctgctaatcggtacccccggggcactggttaagcataccataaaagagaattattac 40362641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 317 - 377
Target Start/End: Complemental strand, 2362861 - 2362801
Alignment:
Q  317 tatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 377  Q
    |||||||||| |||||||||||||||||  | ||| ||||  |||||||||||| ||||||    
T  2362861 tatataatttcctttttcatatccttaaccattgcaccgggagcaccggttagcatttccc 2362801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 226 - 283
Target Start/End: Original strand, 10617284 - 10617345
Alignment:
Q  226 gggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattattac 283  Q
    |||||||||||| ||||||    ||| ||| ||||||||||||||||||||| |||||||||    
T  10617284 gggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattac 10617345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 13898986 - 13899034
Alignment:
Q  286 attaattacacaattt-caatacattaactactatataattttcttttt 333  Q
    |||||||||| ||||| ||||||| ||| ||||||||||||||||||||    
T  13898986 attaattacaaaattttcaatacaataattactatataattttcttttt 13899034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 226 - 283
Target Start/End: Complemental strand, 46352820 - 46352759
Alignment:
Q  226 gggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattattac 283  Q
    |||||||||||| ||||||    ||| ||| ||||||||||||||||||||| |||||||||    
T  46352820 gggtcctgctaaccggtgcctccggggcacgggttaagcataccataaaagggaattattac 46352759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 925 - 825
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| |||| |||||    
T  925 ttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatatccttaactagtgctccggaagcaccggctagcatttcc 826  T
Q  377 c 377  Q
    |    
T  825 c 825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 4e-33; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 6283662 - 6283562
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||| || ||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||    
T  6283662 ttattataaattaattacacaatttcaatgcattaattattatataattttctttttcatatctttaactagtgccccggaggcaccggttagcatttcc 6283563  T
Q  377 c 377  Q
    |    
T  6283562 c 6283562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 285 - 383
Target Start/End: Complemental strand, 13661900 - 13661802
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaa 383  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  ||||| |||| ||||||||||||| ||||||||||||    
T  13661900 aattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgctccgggggcaccggttagcatttccctttaaa 13661802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 277 - 381
Target Start/End: Complemental strand, 35132622 - 35132518
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||  |||| ||||| ||||||||||||| |||||    
T  35132622 ttattataaattaattacacaatttcaatgtattaactactatataatttcctttttcatatccttaaccagtgtcccgggggcaccggttagcatttcc 35132523  T
Q  377 cttta 381  Q
    |||||    
T  35132522 cttta 35132518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 277 - 376
Target Start/End: Original strand, 2619643 - 2619742
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||| ||||||| |||| |||||| |||||    
T  2619643 ttattataaattaattacacaatttcaatacattaactactaaataattttctttttcatatccttaacaagtgtcccggagacaccagttagcatttcc 2619742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 286 - 377
Target Start/End: Complemental strand, 10070060 - 10069969
Alignment:
Q  286 attaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 377  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  |||||||||| ||||||||||||| ||||||    
T  10070060 attaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccc 10069969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 276 - 377
Target Start/End: Original strand, 35504325 - 35504426
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||  |||| ||||| ||||||||||||| ||||    
T  35504325 attattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgtcccgggggcaccggttagcatttc 35504424  T
Q  376 cc 377  Q
    ||    
T  35504425 cc 35504426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 276 - 388
Target Start/End: Original strand, 34650918 - 34651029
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||  |||| ||||| ||||||||||||| ||||    
T  34650918 attattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtg-cccgggggcaccggttagcatttc 34651016  T
Q  376 cctttaaattatt 388  Q
    ||  |||||||||    
T  34651017 ccaataaattatt 34651029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 276 - 379
Target Start/End: Original strand, 10054437 - 10054540
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| |||||| || |||||||||| |||||||||| ||||||  |||||||||| ||||||||||||| ||||    
T  10054437 attattataaattaattacacaatttcaatgcattaattattatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttc 10054536  T
Q  376 cctt 379  Q
    ||||    
T  10054537 cctt 10054540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 276 - 386
Target Start/End: Complemental strand, 12506397 - 12506287
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||  |||||  ||||| || ||||||||||||||| ||||    
T  12506397 attattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatactcttaacgagtgctccagaggcaccggttagcatttc 12506298  T
Q  376 cctttaaatta 386  Q
    || | ||||||    
T  12506297 ccataaaatta 12506287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 276 - 379
Target Start/End: Complemental strand, 8787440 - 8787337
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||  ||||||||| ||||||  | |||||||| | ||||||||||| ||||    
T  8787440 attattataaattaattacacaatttcaatgcattaactactatataatttcatttttcatacccttaaccaatgccccggggacaccggttagcatttc 8787341  T
Q  376 cctt 379  Q
    ||||    
T  8787340 cctt 8787337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 277 - 380
Target Start/End: Complemental strand, 13470251 - 13470148
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||| ||||||||||| |||| |||||||||| |||| |||||||||||||||||  ||||||||  |||||||||||||| |||||    
T  13470251 ttattataaattaattatacaatttcaatgcattgactactatattatttcctttttcatatccttaaccagtgccccataggcaccggttagcatttcc 13470152  T
Q  377 cttt 380  Q
    ||||    
T  13470151 cttt 13470148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 285 - 379
Target Start/End: Original strand, 19647752 - 19647846
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 379  Q
    ||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||  ||||||||||||  |||||||||| ||| ||||    
T  19647752 aattaattatacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccccggagataccggttagcattttcctt 19647846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 277 - 383
Target Start/End: Original strand, 40564490 - 40564594
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||   || ||||||  ||||||||||| |||||    
T  40564490 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcaaatccttaatcgatgtcccgga--caccggttagcatttcc 40564587  T
Q  377 ctttaaa 383  Q
    || ||||    
T  40564588 ctataaa 40564594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 277 - 379
Target Start/End: Complemental strand, 4837357 - 4837256
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| |||||   ||||||||| ||||||||||| | |||||    
T  4837357 ttattataaattaattacacaatttcaatgcattaattactatataatttcctttttcatattcttaaccggtgccccgg-ggcaccggttaacatttcc 4837259  T
Q  377 ctt 379  Q
    |||    
T  4837258 ctt 4837256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 285 - 377
Target Start/End: Original strand, 11958061 - 11958153
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 377  Q
    ||||||||||||||||||| | |||||||||||||||||||| |||||| ||||| ||||   ||||||||| ||||||||||||| ||||||    
T  11958061 aattaattacacaatttcattgcattaactactatataatttccttttttatatctttaacctgtgccccgggggcaccggttagcatttccc 11958153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 21547480 - 21547547
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||    
T  21547480 ttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaa 21547547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 370
Target Start/End: Complemental strand, 11846172 - 11846079
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagc 370  Q
    |||||| ||||||||||||||||||||||  ||||||||||||||||||| |||||| |||||||||  ||||| ||||| | ||||| |||||    
T  11846172 ttattataaattaattacacaatttcaatgtattaactactatataatttccttttttatatccttagctagtgtcccggggacaccgcttagc 11846079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 277 - 381
Target Start/End: Complemental strand, 31909731 - 31909628
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||| ||||||||||||||||| |||||||||||||||||||| | |||| ||||||||||  |||   |||||||||||||||| | |||||    
T  31909731 ttattataaatcaattacacaatttcaatgcattaactactatataatttcccttttaatatccttaaccagt-atccggaggcaccggttaacatttcc 31909633  T
Q  377 cttta 381  Q
    |||||    
T  31909632 cttta 31909628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 277 - 376
Target Start/End: Complemental strand, 20175327 - 20175228
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||  ||||| ||||  ||||  |||| | ||||| ||||||||||| |||||    
T  20175327 ttattataaattaattacacaatttcaatgcattaactactatataatttctttttttatatttttaaccagtgtctcggagacaccggttagcatttcc 20175228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 288 - 379
Target Start/End: Complemental strand, 39069469 - 39069379
Alignment:
Q  288 taattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 379  Q
    |||||||||||||| ||| ||||||||||||||||| |||| |||||||| ||||||  ||||||| ||| |||||||||||| ||||||||    
T  39069469 taattacacaattttaatgcattaactactatataa-tttccttttcatacccttaaccagtgccctggaagcaccggttagcatttccctt 39069379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 40057407 - 40057339
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaat 345  Q
    |||||| |||||||||| || |||||||| || ||||||||||||||||| ||||||||||||||||||    
T  40057407 ttattataaattaattatactatttcaatgcactaactactatataatttcctttttcatatccttaat 40057339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 9721693 - 9721760
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||| ||||||||||| |||||| ||||||||||||| ||||||||||| |||||    
T  9721693 ttattataaattaattaaacaatttcaatgcattaattactatataatttcctttttcatattcttaa 9721760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 284 - 344
Target Start/End: Complemental strand, 6284888 - 6284828
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||||||| |||||||||||||||||| ||||||||||||| ||||||  |||||||||    
T  6284888 aaattaattatacaatttcaatacattaattactatataatttcctttttagtatccttaa 6284828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 284 - 344
Target Start/End: Original strand, 19436929 - 19436989
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||||||| ||||||||||| | ||||| |||||||||||| |||||||||||||||||    
T  19436929 aaattaattatacaatttcaatgctttaaccactatataatttcctttttcatatccttaa 19436989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 34650826 - 34650894
Alignment:
Q  219 taaattagggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattattac 283  Q
    ||||||||||||||||||| ||||||    ||| ||||||||||||||||||||||||| |||||||||    
T  34650826 taaattagggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattac 34650894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 380
Target Start/End: Original strand, 21944986 - 21945050
Alignment:
Q  317 tatataattttctttttcat-atccttaattagtgccccggaggcaccggttagcctttcccttt 380  Q
    |||||||||||| |||| || ||||||||  |||||||||||||||||||||||| |||||||||    
T  21944986 tatataattttcctttttattatccttaaccagtgccccggaggcaccggttagcatttcccttt 21945050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 39067021 - 39067089
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaact-actatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||||| |||||||||| ||||||| | ||||||||||  ||||||||||||||||    
T  39067021 ttattataaattaattacataatttcaatatattaactaattatataatttcttttttcatatccttaa 39067089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 378
Target Start/End: Complemental strand, 10956044 - 10955950
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttctttt-tcatatccttaattagtgccccggaggcaccggttagcctttccct 378  Q
    |||||||||| ||||||||||| ||||||||||| |||||||  ||||| |  ||| |||||  ||||||||||||||| | |||||| |||||||    
T  10956044 aaattaatta-acaatttcaatgcattaactactttataattcccttttatggtatgcttaaccagtgccccggaggcaacagttagcatttccct 10955950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 13662005 - 13661933
Alignment:
Q  215 tatttaaattagggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattattac 283  Q
    |||||||| |||||||||||||| ||||||    ||| ||| ||||||||||||||||||||  |||||||||    
T  13662005 tatttaaactagggtcctgctaaccggtgcctccggggcacgggttaagcataccataaaagagaattattac 13661933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 31909790 - 31909752
Alignment:
Q  244 cgggacactggttaagcataccataaaaggaaattatta 282  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  31909790 cgggatactggttaagcataccataaaagaaaattatta 31909752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 10956109 - 10956076
Alignment:
Q  250 actggttaagcataccataaaaggaaattattac 283  Q
    |||||||||||||| |||||||||||||||||||    
T  10956109 actggttaagcatatcataaaaggaaattattac 10956076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 11957966 - 11958028
Alignment:
Q  225 agggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattattac 283  Q
    ||||||||||||| ||||||    ||| |||||||||||||| |||||||||| |||||||||    
T  11957966 agggtcctgctaaccggtgcccctggggcactggttaagcatgccataaaagggaattattac 11958028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 35504240 - 35504299
Alignment:
Q  225 agggtcctgctaatcggtgcg---ggacactggttaagcataccataaaaggaaattatt 281  Q
    ||||||||||||| ||||||    |||||| ||||||||||||||||||||| |||||||    
T  35504240 agggtcctgctaaccggtgcccccggacacgggttaagcataccataaaagggaattatt 35504299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 10955973 - 10956009
Alignment:
Q  244 cgggacactggttaagcataccataaaaggaaattat 280  Q
    |||| ||||||||||||||||||||||||| ||||||    
T  10955973 cggggcactggttaagcataccataaaagggaattat 10956009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 4e-30; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 277 - 380
Target Start/End: Original strand, 29993573 - 29993676
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||   ||||||||| |||||| |||||| |||||    
T  29993573 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccggtgccccgggggcacccgttagcatttcc 29993672  T
Q  377 cttt 380  Q
    ||||    
T  29993673 cttt 29993676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 276 - 379
Target Start/End: Complemental strand, 34333385 - 34333282
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| |||||| ||||||||||||| |||||||||| ||||||  |||||||||| ||||||||||||| ||||    
T  34333385 attattataaattaattacacaatttcaatgcattaattactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttc 34333286  T
Q  376 cctt 379  Q
    ||||    
T  34333285 cctt 34333282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 277 - 376
Target Start/End: Complemental strand, 47657080 - 47656981
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||  |||||||| || |||||||||||| |||||    
T  47657080 ttattataaattaattacacaatttcaatgcattaattactatataattttctttttcatatccttaaccagtgcccccgaagcaccggttagcatttcc 47656981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 276 - 378
Target Start/End: Complemental strand, 5239386 - 5239284
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||| | ||||  ||||| |||||||||||||||||| ||||    
T  5239386 attattataaattaattacacaatttcaatgcattaactactatataatttcctttttcataccattaaccagtgctccggaggcaccggttagcatttc 5239287  T
Q  376 cct 378  Q
    |||    
T  5239286 cct 5239284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 277 - 379
Target Start/End: Original strand, 12218522 - 12218624
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||   |||||||||| ||||||||||||| |||||    
T  12218522 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatacttatccagtgccccgggggcaccggttagcatttcc 12218621  T
Q  377 ctt 379  Q
    |||    
T  12218622 ctt 12218624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 277 - 379
Target Start/End: Complemental strand, 18486061 - 18485959
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||  ||||||||||  |||||||||| ||||||||||||| |||||    
T  18486061 ttattataaattaattacacaatttcaatacattaattactatataatttccttttcaatatccttaaccagtgccccgggggcaccggttagcatttcc 18485962  T
Q  377 ctt 379  Q
    |||    
T  18485961 ctt 18485959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 276 - 377
Target Start/End: Complemental strand, 24438578 - 24438477
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 375  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||||| ||| |||||||||| |||||| ||||||||||| ||||||||||||| ||||    
T  24438578 attattataaattaattacataatttcaatgcattaactactatatagtttcctttttcatacccttaactagtgccccgggggcaccggttagcatttc 24438479  T
Q  376 cc 377  Q
    ||    
T  24438478 cc 24438477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 34606361 - 34606261
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||| |||||||||||| |||||| ||||||||||||| |||||||||||||||||  ||||||||||||||||| |||||| |||||    
T  34606361 ttattataaattaatttcacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgccccggaggcaccagttagcatttcc 34606262  T
Q  377 c 377  Q
    |    
T  34606261 c 34606261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 277 - 379
Target Start/End: Original strand, 24798489 - 24798590
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||  |||| ||||| ||||||||||||| |||||    
T  24798489 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctcaacaagtg-cccgggggcaccggttagcatttcc 24798587  T
Q  377 ctt 379  Q
    |||    
T  24798588 ctt 24798590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 277 - 376
Target Start/End: Complemental strand, 28588009 - 28587911
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||  ||||  |||| ||||||||||||| |||||    
T  28588009 ttattataaattaattacacaatttcaatacattgactactatataatttcctttttcatatccttaaccagtg-tccgggggcaccggttagcatttcc 28587911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 277 - 356
Target Start/End: Complemental strand, 30810755 - 30810676
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccgg 356  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  ||||||||||    
T  30810755 ttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccccgg 30810676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 277 - 377
Target Start/End: Original strand, 8754671 - 8754771
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||  ||||| ||   ||||||||||||| |||||    
T  8754671 ttattataaattaattacacaatttcaatgcattaactactatataatttcatttttcatatccttaaccagtgctcccagggcaccggttagcatttcc 8754770  T
Q  377 c 377  Q
    |    
T  8754771 c 8754771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 284 - 380
Target Start/End: Original strand, 34546407 - 34546503
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttt 380  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||   || || ||| |||| |||||||| |||||||||    
T  34546407 aaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccggtacctcgggggcatcggttagcatttcccttt 34546503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 277 - 380
Target Start/End: Complemental strand, 4628666 - 4628563
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||| |||||||||||  ||||||||||||||||||| |||||||||||||||||   ||||||| | |||| |||||||| |||||    
T  4628666 ttattataaattaattaaacaatttcaatgtattaactactatataatttcctttttcatatccttaaccggtgccccaggggcatcggttagcatttcc 4628567  T
Q  377 cttt 380  Q
    ||||    
T  4628566 cttt 4628563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 277 - 384
Target Start/End: Original strand, 7689286 - 7689393
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| |||||| |||| || ||||| |||||| ||||||||||| |||| ||| ||| ||||||||| | |||||    
T  7689286 ttattataaattaattacacaatttcaatgcattaattactgtaaaatttccttttttatatccttaatcagtgtcccagagacaccggttaacatttcc 7689385  T
Q  377 ctttaaat 384  Q
    ||||||||    
T  7689386 ctttaaat 7689393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 277 - 370
Target Start/End: Original strand, 11686410 - 11686503
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagc 370  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||  |||  |||||| ||||| ||||||    
T  11686410 ttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtatcccggaagcaccagttagc 11686503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 277 - 378
Target Start/End: Original strand, 27456199 - 27456299
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||  |||| |||||||||||  |||| ||||| |||||| |||||| |||||    
T  27456199 ttattataaattaattacacaatttcaatgcattaactactatataatttctttttccatatccttaaccagtg-cccgggggcaccagttagcatttcc 27456297  T
Q  377 ct 378  Q
    ||    
T  27456298 ct 27456299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 285 - 377
Target Start/End: Complemental strand, 1737072 - 1736980
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 377  Q
    |||||||||||| |||||||| ||||||||| ||||||||||  ||||||||||||||||  |||||||| || |||||||||||| ||||||    
T  1737072 aattaattacactatttcaatgcattaactattatataatttcatttttcatatccttaaccagtgccccagaagcaccggttagcatttccc 1736980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 18117243 - 18117176
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||    
T  18117243 ttattataaattaattacacaatttcaatacattaactactatataatttcctctttcatatacttaa 18117176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 344
Target Start/End: Complemental strand, 47083147 - 47083088
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  47083147 aattaattacacaatttcaatacattaactactatataatttcttttttcatatccttaa 47083088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 378
Target Start/End: Complemental strand, 47839592 - 47839492
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||||||||||||  |||||||| ||||||| || |||||||||||||||||  ||| |||||| | ||||||||||| |||||    
T  47839592 ttattataaattaattacacaatttcaatgtattaactattatataaattcctttttcatatccttaaccagtaccccgg-gacaccggttagcatttcc 47839494  T
Q  377 ct 378  Q
    ||    
T  47839493 ct 47839492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 277 - 377
Target Start/End: Original strand, 43594122 - 43594222
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||| ||||||||||| ||||||||| |||||||||| |||||| ||||||||||  ||||  |||| | ||||||||||| |||||    
T  43594122 ttattataaattaattatacaatttcaatgcattaactattatataatttccttttttatatccttaaccagtgttccggggacaccggttagcatttcc 43594221  T
Q  377 c 377  Q
    |    
T  43594222 c 43594222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 13064963 - 13065030
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| ||||||||||||||| ||||||||||||| || |||||||||| |||||||||||||||||    
T  13064963 ttattataaattaattacacaaattcaatacattaaatattatataatttcctttttcatatccttaa 13065030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 23363253 - 23363320
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||||||||||||||| |||||||||||||| ||||| ||||||| |||||||||    
T  23363253 ttattataaattaattacacaatttcaatgcattaactactatacaatttcctttttcttatccttaa 23363320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 379
Target Start/End: Complemental strand, 5729438 - 5729344
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 379  Q
    |||||||||||  |||||||||||||||||| |||||||||| |||||||||||||||||  ||||| ||||   ||||||||| | ||||||||    
T  5729438 aattaattacattatttcaatacattaactattatataatttcctttttcatatccttaaccagtgctccgggaacaccggttaacatttccctt 5729344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 277 - 350
Target Start/End: Complemental strand, 33636552 - 33636479
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtg 350  Q
    |||||| ||||||||||||||||||||||  ||||| || |||||||||||||||||||||| ||||| |||||    
T  33636552 ttattataaattaattacacaatttcaatgaattaattattatataattttctttttcatattcttaactagtg 33636479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 277 - 378
Target Start/End: Original strand, 37631628 - 37631729
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||| ||||| ||| |||||| || |||||||||| |||||| ||||||||||   |||||||||| |||||||||| | |||||    
T  37631628 ttattataaattaattacataattttaatgcattaattattatataatttccttttttatatccttaacccgtgccccggaagcaccggttaacatttcc 37631727  T
Q  377 ct 378  Q
    ||    
T  37631728 ct 37631729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 344
Target Start/End: Original strand, 18220531 - 18220591
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||  |||||||||    
T  18220531 aaattaattacacaattttaatacattaattactatataattttctttttagtatccttaa 18220591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 276 - 344
Target Start/End: Complemental strand, 45045871 - 45045803
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    ||||||| |||||||||||||||||||||| |||||| |||||||||||||  ||||||||| ||||||    
T  45045871 attattataaattaattacacaatttcaatgcattaattactatataatttcatttttcatacccttaa 45045803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 525161 - 525228
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||| ||||||||||| ||||||||||| |||| |||||||||||||||| ||||    
T  525161 ttattataaattaattatacaatttcaatgcattaactactgtatacttttctttttcatatctttaa 525228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 29835790 - 29835857
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||| || |||||||||||| ||||    
T  29835790 ttattacaaattaattacgcaattttaatacattaactagtatataacttcctttttcatatctttaa 29835857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 4100612 - 4100677
Alignment:
Q  279 attacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||| |||||||| ||| ||||| |||||||||| ||||||||||||| |||||||||||||||||    
T  4100612 attataaattaataacataattttaatacattaattactatataatttcctttttcatatccttaa 4100677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 280 - 333
Target Start/End: Original strand, 18220620 - 18220673
Alignment:
Q  280 ttacaaattaattacacaatttcaatacattaactactatataattttcttttt 333  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  18220620 ttacaaattaattacacaatttcaatacagtaattactatataatttccttttt 18220673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 370
Target Start/End: Complemental strand, 28262118 - 28262038
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagc 370  Q
    ||||||||||| ||||||||||     ||||||||||||||| |||||||||||||||||   ||| |||||||||||||||||||    
T  28262118 aattaattacataatttcaata-----actactatataatttcctttttcatatccttaaccggtgacccggaggcaccggttagc 28262038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 37674190 - 37674239
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattt 326  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  37674190 ttattataaattaattacacaatttcaatgcattaactactatataattt 37674239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 276 - 337
Target Start/End: Original strand, 42044378 - 42044439
Alignment:
Q  276 attattacaaattaattacacaatttcaatacattaactactatataattttctttttcata 337  Q
    ||||||| ||||||||||||||||||||||  |||||||||||||||||||  |||||||||    
T  42044378 attattataaattaattacacaatttcaatctattaactactatataatttcttttttcata 42044439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 284 - 377
Target Start/End: Original strand, 18470032 - 18470126
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtg-ccccggaggcaccggttagcctttccc 377  Q
    ||||||||||||||||||||||  ||||||| ||||||||||| ||||||  ||| |||||   ||| |||||| ||||||||||||| ||||||    
T  18470032 aaattaattacacaatttcaatgtattaactgctatataatttcctttttagtatgcttaaccggtgcccccgggggcaccggttagcatttccc 18470126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 333
Target Start/End: Original strand, 18220763 - 18220812
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttcttttt 333  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  18220763 aaattaattacacaatttctatacattaattactatataatttccttttt 18220812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 332
Target Start/End: Complemental strand, 22739916 - 22739868
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttctttt 332  Q
    |||||||||||||||||||||| |||||||||||||||| ||| |||||    
T  22739916 aaattaattacacaatttcaatgcattaactactatatactttcctttt 22739868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 23357823 - 23357894
Alignment:
Q  307 cattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 378  Q
    |||||||||||||| |||||||||||||||||||||||  ||| | || |||| |||||||| | |||||||    
T  23357823 cattaactactatacaattttctttttcatatccttaacgagtactccagaggaaccggttaacatttccct 23357894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 283
Target Start/End: Original strand, 29993509 - 29993548
Alignment:
Q  244 cgggacactggttaagcataccataaaaggaaattattac 283  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  29993509 cgggacactggttaagcataccataaaagggaattattac 29993548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 382
Target Start/End: Complemental strand, 22973667 - 22973593
Alignment:
Q  308 attaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaa 382  Q
    |||||||||||||||||||  ||||| ||||| ||||  ||||||||||||||||  |||||| |||| ||||||    
T  22973667 attaactactatataatttctttttttatatcattaaccagtgccccggaggcactagttagcatttctctttaa 22973593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 284 - 333
Target Start/End: Complemental strand, 4087716 - 4087667
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttcttttt 333  Q
    |||||||| |||| |||||||| |||||||||||||||||||| ||||||    
T  4087716 aaattaatcacactatttcaatgcattaactactatataatttccttttt 4087667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 344
Target Start/End: Complemental strand, 3021984 - 3021924
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||||||| |||||||||||  |||||||| |||||||||| |||||| |||| |||||    
T  3021984 aaattaattatacaatttcaatgtattaactagtatataatttcctttttaatatgcttaa 3021924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 283
Target Start/End: Complemental strand, 24438663 - 24438602
Alignment:
Q  226 gggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattattac 283  Q
    |||||||||||| ||||||    ||| ||||||||||||||||||||||||| |||||||||    
T  24438663 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattac 24438602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 46716738 - 46716671
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||||| ||||||| | |||||| || |||||||||| |||||| ||||| ||||    
T  46716738 ttattataaattaattacataatttcagtgcattaagtattatataatttccttttttatatctttaa 46716671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 377
Target Start/End: Original strand, 47118095 - 47118150
Alignment:
Q  322 aattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 377  Q
    ||||| |||||||||||| ||||  ||||||||||||||||| |||||| ||||||    
T  47118095 aatttcctttttcatatctttaaccagtgccccggaggcaccagttagcatttccc 47118150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 4628725 - 4628691
Alignment:
Q  249 cactggttaagcataccataaaaggaaattattac 283  Q
    ||||||||||||||||||||||||| |||||||||    
T  4628725 cactggttaagcataccataaaagggaattattac 4628691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 13064903 - 13064937
Alignment:
Q  249 cactggttaagcataccataaaaggaaattattac 283  Q
    ||||||||||||||||||||||||| |||||||||    
T  13064903 cactggttaagcataccataaaagggaattattac 13064937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 18117302 - 18117268
Alignment:
Q  249 cactggttaagcataccataaaaggaaattattac 283  Q
    ||||||||||||||||||||||| |||||||||||    
T  18117302 cactggttaagcataccataaaatgaaattattac 18117268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 34606449 - 34606386
Alignment:
Q  224 tagggtcctgctaatcggtgc----gggacactggttaagcataccataaaaggaaattattac 283  Q
    |||||||||||||| ||||||    ||| ||| ||||||||||||||||||||| |||||||||    
T  34606449 tagggtcctgctaaccggtgctcccggggcacgggttaagcataccataaaaggtaattattac 34606386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 331
Target Start/End: Original strand, 38022586 - 38022632
Alignment:
Q  286 attaattacacaattt-caatacattaactactatataattttcttt 331  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||||    
T  38022586 attaattatacaattttcaatacaataactactatataattttcttt 38022632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 45045934 - 45045896
Alignment:
Q  244 cgggacactggttaagcataccataaaaggaaattatta 282  Q
    |||| ||||||||||||||||||||||||| ||||||||    
T  45045934 cggggcactggttaagcataccataaaagggaattatta 45045896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 283
Target Start/End: Original strand, 8754617 - 8754646
Alignment:
Q  254 gttaagcataccataaaaggaaattattac 283  Q
    ||||||||||||||||||||||||||||||    
T  8754617 gttaagcataccataaaaggaaattattac 8754646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 271
Target Start/End: Original strand, 37674105 - 37674153
Alignment:
Q  225 agggtcctgctaatcggtgcg--ggacactggttaagcataccataaaa 271  Q
    ||||||||||||| ||||||   ||||||||||||||||||||||||||    
T  37674105 agggtcctgctaaccggtgccccggacactggttaagcataccataaaa 37674153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 42044291 - 42044354
Alignment:
Q  223 ttagggtcctgctaatcggtgc---gggacactggttaagcataccataaaaggaaattattac 283  Q
    |||||||| |||||| ||||||   ||| |||||||||| |||||||||||||| |||||||||    
T  42044291 ttagggtcatgctaaccggtgccccggggcactggttaaacataccataaaagggaattattac 42044354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 368
Target Start/End: Complemental strand, 19434534 - 19434502
Alignment:
Q  336 tatccttaattagtgccccggaggcaccggtta 368  Q
    |||||||||| ||||||||||||||||||||||    
T  19434534 tatccttaatcagtgccccggaggcaccggtta 19434502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 344
Target Start/End: Complemental strand, 36437470 - 36437410
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||||||| |||||||||||  |||| |||||||||||||  ||||||  |||||||||    
T  36437470 aaattaattaaacaatttcaatgaattacctactatataattacctttttagtatccttaa 36437410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 50648 - 50548
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||| |||||||||| ||||||||||||||||||||| |||||||||||| ||||  |||||||||||||||||||||| | |||||    
T  50648 ttattataaattaattatacaatttcaaaacattaactactatataatttcctttttcatatctttaaccagtgccccggaggcaccggttaacatttcc 50549  T
Q  377 c 377  Q
    |    
T  50548 c 50548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 53432 - 53499
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| |||||||||| ||||||||||| |||||||||||||||||||| |||||| ||||||||||    
T  53432 ttattataaattaattatacaatttcaatgcattaactactatataatttccttttttatatccttaa 53499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 284 - 383
Target Start/End: Original strand, 53778 - 53877
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaa 383  Q
    |||||||||||||||||| ||| |||||||||||||||||||| |||||||||| ||||||  |||||||||| ||||||||||||| ||||||| ||||    
T  53778 aaattaattacacaattttaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccctataaa 53877  T

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Target: scaffold0264 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 277 - 379
Target Start/End: Complemental strand, 23061 - 22959
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||||||||||||  ||||| ||||||||||||| |||||||||||||||||  ||||| |||| ||||||||||||| |||||    
T  23061 ttattataaattaattacacaatttcaatgtattaattactatataatttcctttttcatatccttaaccagtgctccgggggcaccggttagcatttcc 22962  T
Q  377 ctt 379  Q
    |||    
T  22961 ctt 22959  T

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Target: scaffold0021 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 285 - 379
Target Start/End: Complemental strand, 116296 - 116202
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 379  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||   ||||||||| ||||||||||||| ||| ||||    
T  116296 aattaattacacaatttcaatgcattaactactatataatttcctttttcatatctttaacctgtgccccgggggcaccggttagcattttcctt 116202  T

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Target: scaffold0188 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 277 - 376
Target Start/End: Original strand, 6196 - 6295
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| || |||||||||||||| |||| |||||||||||||||| ||| |||||||||||||||||  |||||||| | ||||||||||||| |||||    
T  6196 ttattataatttaattacacaattccaatgcattaactactatatagtttcctttttcatatccttaaccagtgccccaggggcaccggttagcatttcc 6295  T

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Target: scaffold0014 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 277 - 379
Target Start/End: Original strand, 68376 - 68478
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| || ||| ||||||||||| ||| ||||||||||||||||||||  ||||||||||||||||  |||||||||| |||||| |||||| |||||    
T  68376 ttattataatttatttacacaattttaatgcattaactactatataatttcatttttcatatccttaaccagtgccccgggggcaccagttagcatttcc 68475  T
Q  377 ctt 379  Q
    |||    
T  68476 ctt 68478  T

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Target: scaffold0014; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 68318 - 68351
Alignment:
Q  250 actggttaagcataccataaaaggaaattattac 283  Q
    |||||||||||||||||||||||| |||||||||    
T  68318 actggttaagcataccataaaagggaattattac 68351  T

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Target: scaffold0002 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 285 - 379
Target Start/End: Original strand, 146999 - 147093
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 379  Q
    |||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||| |||  |||| |  |||||||||||| ||||||||    
T  146999 aattaattacacaatttcaatgtattaactactatataatttcctttttcatatccttaactagaaccccaggagcaccggttagcatttccctt 147093  T

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Target: scaffold1266 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 277 - 378
Target Start/End: Complemental strand, 392 - 292
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||| |||||||||||||||| ||||||||| |||||||||||||||||||||| |||||  ||||||| || ||||||||||||  |||||    
T  392 ttattataaatttattacacaatttcaatgcattaactattatataattttctttttcatatgcttaaccagtgccctgg-ggcaccggttaggatttcc 294  T
Q  377 ct 378  Q
    ||    
T  293 ct 292  T

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Target: scaffold0674 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 285 - 353
Target Start/End: Original strand, 7991 - 8059
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccc 353  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  |||||||    
T  7991 aattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccc 8059  T

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Target: scaffold0549 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 285 - 353
Target Start/End: Complemental strand, 7380 - 7312
Alignment:
Q  285 aattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccc 353  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  |||||||    
T  7380 aattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccc 7312  T

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Target: scaffold1152 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 378
Target Start/End: Complemental strand, 778 - 677
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||||||||||||  ||||||||||||||||||| |||||||||||| ||||   |||| | || ||||||| ||||| |||||    
T  778 ttattataaattaattacacaatttcaatggattaactactatataatttcctttttcatatctttaacccgtgctctgggggcaccgattagcatttcc 679  T
Q  377 ct 378  Q
    ||    
T  678 ct 677  T

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Target: scaffold0190 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 14996 - 14896
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||| |||||||||||| | ||||||||||||||||||||  ||||| ||||| ||||  |||||||||| | ||||||||||| |||||    
T  14996 ttattataaattaactacacaatttcagtgcattaactactatataatttctttttttatatctttaaccagtgccccggggacaccggttagcatttcc 14897  T
Q  377 c 377  Q
    |    
T  14896 c 14896  T

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Target: scaffold0190; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 283
Target Start/End: Complemental strand, 15060 - 15021
Alignment:
Q  244 cgggacactggttaagcataccataaaaggaaattattac 283  Q
    |||| ||||||||||||||||||||||||| |||||||||    
T  15060 cggggcactggttaagcataccataaaagggaattattac 15021  T

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Target: scaffold0038 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 25818 - 25719
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||   ||  ||| |||||||| |||||| |||||    
T  25818 ttattataaattaattacacaatttcaatacattaattactatataa-ttcctttttcatatccttaacccgtatcccagaggcaccagttagcatttcc 25720  T

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Target: scaffold0034 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 379
Target Start/End: Original strand, 95670 - 95772
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 376  Q
    |||||| |||||||||||| ||||||||| |||||| || |||||||||| ||||||||||| |||||  ||| || ||| ||||||||||||| ||| |    
T  95670 ttattataaattaattacataatttcaattcattaattattatataatttcctttttcatattcttaaccagtacctcgggggcaccggttagcattttc 95769  T
Q  377 ctt 379  Q
    |||    
T  95770 ctt 95772  T

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Target: scaffold0206 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 287 - 344
Target Start/End: Original strand, 11066 - 11123
Alignment:
Q  287 ttaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    ||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||    
T  11066 ttaattacacaatttcaatgcattaactaatatataatttcctttttcatatccttaa 11123  T

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Target: scaffold0533 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 344
Target Start/End: Complemental strand, 5132 - 5072
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||| |||| |||||    
T  5132 aaattaattacacaatttcaataaattaactactatataattttttttttaatattcttaa 5072  T

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Target: scaffold0050 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 353
Target Start/End: Complemental strand, 69326 - 69250
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccc 353  Q
    |||||| |||||||||||| ||||| |||  ||||||||||||||||||| |||||||||||||||||  |||||||    
T  69326 ttattataaattaattacataattttaatgtattaactactatataatttactttttcatatccttaacgagtgccc 69250  T

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Target: scaffold0050; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 344
Target Start/End: Original strand, 33774 - 33834
Alignment:
Q  284 aaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    ||||||||||||||||||||||  |||||||| |||||||||| | |||| |||| |||||    
T  33774 aaattaattacacaatttcaatgtattaactattatataatttccattttaatatacttaa 33834  T

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Target: scaffold0325 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 277 - 340
Target Start/End: Original strand, 17557 - 17619
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatcc 340  Q
    |||||| ||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||    
T  17557 ttattataaattaatt-cacaatttcaatgcattagctactatataattttctttttcatatcc 17619  T

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Target: scaffold0113 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 279 - 363
Target Start/End: Complemental strand, 41017 - 40933
Alignment:
Q  279 attacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaattagtgccccggaggcacc 363  Q
    |||| |||||||||||| ||||||||| ||||||||| ||||||||||  |||||||||| ||||||  |||| ||||| |||||    
T  41017 attataaattaattacataatttcaatgcattaactattatataatttcatttttcatattcttaatcggtgctccggaagcacc 40933  T

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Target: scaffold0113; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 41083 - 41045
Alignment:
Q  244 cgggacactggttaagcataccataaaaggaaattatta 282  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  41083 cgggacactggttaagcatatcataaaaggaaattatta 41045  T

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Target: scaffold0263 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 19671 - 19738
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactactatataattttctttttcatatccttaa 344  Q
    |||||| ||||| |||||||||||||||| |||||| || ||||||||||  |||||||||| |||||    
T  19671 ttattataaattcattacacaatttcaatgcattaattattatataatttcttttttcatatgcttaa 19738  T

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Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 345
Target Start/End: Original strand, 74567 - 74628
Alignment:
Q  285 aattaattacacaatttcaatacattaact-actatataattttctttttcatatccttaat 345  Q
    ||||||||| ||||||||| |||||||| | ||||||||||||| ||||||||||| |||||    
T  74567 aattaattatacaatttcactacattaatttactatataattttttttttcatatctttaat 74628  T

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Target: scaffold0425 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 316
Target Start/End: Complemental strand, 10810 - 10771
Alignment:
Q  277 ttattacaaattaattacacaatttcaatacattaactac 316  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  10810 ttattataaattaattacacaatttcaatgcattaactac 10771  T

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Target: scaffold1128 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 326
Target Start/End: Complemental strand, 1462 - 1422
Alignment:
Q  286 attaattacacaatttcaatacattaactactatataattt 326  Q
    |||||||||||||||||||| || |||||| ||||||||||    
T  1462 attaattacacaatttcaatgcaataactattatataattt 1422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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