View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18812_low_10 (Length: 237)
Name: NF18812_low_10
Description: NF18812
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18812_low_10 |
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Alignment Details
Target: chr6 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 183020 - 182869
Alignment:
| Q |
1 |
tatcttcactcattaatcaaatagatagtttgttaggattgcatacttttatatgaactgattggctataaaatcagttaaatgatggtccattatatac |
100 |
Q |
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| T |
183020 |
tatcttcactcattaatcaaatagatagtttgttaggattgcatacttttatatgaactgattggctataaaatcaattaaataatggcccattatataa |
182921 |
T |
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| Q |
101 |
ctttcacatgagatcctgtttattactgttacaaaaatacccctatttaatc |
152 |
Q |
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| T |
182920 |
ctttcacatgagatcctgtttattactgttacaaaaatactcctatttaatc |
182869 |
T |
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