View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18813_low_5 (Length: 348)
Name: NF18813_low_5
Description: NF18813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18813_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 321; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 1 - 333
Target Start/End: Original strand, 44571801 - 44572133
Alignment:
| Q |
1 |
gtggaaaagttgatagaaagagagcgaggaggaaaagaagaagagagaattgctttggcttaggtattccatacttccctctcttctacatattttgttt |
100 |
Q |
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| T |
44571801 |
gtggaaaagttgatagaaagagagcgaggaggaaaagaagaagagagaattgctttggcttaggcattccatacttccctctcttctacatattttgttt |
44571900 |
T |
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| Q |
101 |
agagctgattttggaagagttttatgaatattcagtagttatttttaccatgatcatgtgaatagctcatggatcatgcatgcaaatgggtaaagtggga |
200 |
Q |
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| T |
44571901 |
agagctgattttggaagagttttatgaatattcagtagttatttttaccatgatcatgtgaatagctcatggatcatgcatgcaaatgggtaaagtggga |
44572000 |
T |
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| Q |
201 |
atagattgtaagaattagagatttcaatgtgaatgtgtattctggttgtgttcaatttcctttattgttcttgaacagaaacttacatgattattttcta |
300 |
Q |
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| T |
44572001 |
atagattgtaagaattagagatttcaatgtgaatgtgtattctggttgtgttcaatttcctttattgttcttgaacagaaacttacatgtttattttcta |
44572100 |
T |
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| Q |
301 |
attttacttgattatgaatttatgtgtcatttg |
333 |
Q |
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| T |
44572101 |
attttacttgattatgaatttatgtgtaatttg |
44572133 |
T |
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