View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18814_high_2 (Length: 610)

Name: NF18814_high_2
Description: NF18814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18814_high_2
NF18814_high_2
[»] chr1 (17 HSPs)
chr1 (294-496)||(48109833-48110035)
chr1 (496-591)||(48109712-48109807)
chr1 (155-194)||(5496545-5496584)
chr1 (155-194)||(7013052-7013091)
chr1 (155-194)||(17606263-17606302)
chr1 (155-194)||(21790750-21790789)
chr1 (155-194)||(39848894-39848933)
chr1 (155-194)||(47374860-47374899)
chr1 (155-194)||(5216561-5216600)
chr1 (155-194)||(10716949-10716988)
chr1 (155-194)||(14886846-14886885)
chr1 (155-194)||(21791498-21791537)
chr1 (155-194)||(46284754-46284793)
chr1 (155-194)||(46285563-46285602)
chr1 (155-193)||(16959504-16959542)
chr1 (155-193)||(29858923-29858961)
chr1 (155-192)||(5497304-5497341)
[»] chr3 (17 HSPs)
chr3 (12-131)||(22259405-22259524)
chr3 (119-191)||(22259545-22259617)
chr3 (84-193)||(5531898-5532002)
chr3 (155-194)||(20200625-20200664)
chr3 (155-194)||(20202809-20202848)
chr3 (155-194)||(47167887-47167926)
chr3 (155-194)||(53950094-53950133)
chr3 (127-194)||(54584869-54584935)
chr3 (155-193)||(30834448-30834486)
chr3 (155-193)||(53949330-53949368)
chr3 (155-191)||(20199870-20199906)
chr3 (155-194)||(11238516-11238555)
chr3 (155-194)||(53948660-53948699)
chr3 (155-193)||(47169174-47169212)
chr3 (130-187)||(22258853-22258909)
chr3 (155-187)||(30833688-30833720)
chr3 (155-191)||(43400785-43400821)
[»] chr4 (11 HSPs)
chr4 (25-191)||(4899415-4899576)
chr4 (137-194)||(550318-550375)
chr4 (155-194)||(29212008-29212047)
chr4 (155-194)||(41695384-41695423)
chr4 (155-194)||(45919511-45919550)
chr4 (129-194)||(13387761-13387825)
chr4 (155-194)||(41696137-41696176)
chr4 (155-194)||(46619644-46619683)
chr4 (156-194)||(4157780-4157818)
chr4 (155-193)||(21825164-21825202)
chr4 (137-194)||(4900130-4900186)
[»] chr7 (16 HSPs)
chr7 (124-187)||(4962374-4962437)
chr7 (155-194)||(3162869-3162908)
chr7 (155-194)||(8487029-8487068)
chr7 (155-194)||(8512704-8512743)
chr7 (155-194)||(8513480-8513519)
chr7 (155-194)||(30469512-30469551)
chr7 (155-194)||(31179935-31179974)
chr7 (155-194)||(38059847-38059886)
chr7 (155-194)||(3163514-3163553)
chr7 (155-194)||(8487825-8487864)
chr7 (155-194)||(30659855-30659894)
chr7 (155-190)||(43742724-43742759)
chr7 (155-194)||(46428135-46428174)
chr7 (159-193)||(43334131-43334165)
chr7 (157-190)||(3219308-3219341)
chr7 (157-190)||(21415413-21415446)
[»] chr8 (5 HSPs)
chr8 (143-194)||(39861657-39861707)
chr8 (155-194)||(5881143-5881182)
chr8 (155-194)||(25128586-25128625)
chr8 (155-194)||(42986646-42986685)
chr8 (155-189)||(5332190-5332224)
[»] scaffold0009 (2 HSPs)
scaffold0009 (155-194)||(105510-105549)
scaffold0009 (155-194)||(106306-106345)
[»] chr6 (9 HSPs)
chr6 (155-194)||(19651071-19651110)
chr6 (155-194)||(19653881-19653920)
chr6 (155-194)||(8992907-8992946)
chr6 (155-194)||(8993601-8993640)
chr6 (155-194)||(9017354-9017393)
chr6 (155-194)||(9018048-9018087)
chr6 (155-194)||(18153258-18153297)
chr6 (155-194)||(18649915-18649954)
chr6 (155-192)||(9280909-9280946)
[»] chr5 (8 HSPs)
chr5 (155-194)||(21145936-21145975)
chr5 (155-194)||(23206211-23206250)
chr5 (155-194)||(42521708-42521747)
chr5 (155-192)||(21148114-21148151)
chr5 (153-194)||(42520617-42520658)
chr5 (155-193)||(42520448-42520486)
chr5 (142-194)||(11768841-11768893)
chr5 (155-187)||(42519647-42519679)
[»] chr2 (7 HSPs)
chr2 (155-194)||(122971-123010)
chr2 (155-194)||(4776993-4777032)
chr2 (155-194)||(19386935-19386974)
chr2 (155-194)||(42849515-42849554)
chr2 (155-194)||(8911853-8911892)
chr2 (155-194)||(39629531-39629570)
chr2 (143-194)||(44926641-44926691)
[»] scaffold0301 (1 HSPs)
scaffold0301 (155-192)||(20732-20769)
[»] scaffold0853 (1 HSPs)
scaffold0853 (155-194)||(615-654)
[»] scaffold0188 (1 HSPs)
scaffold0188 (155-194)||(25614-25653)
[»] scaffold0155 (1 HSPs)
scaffold0155 (155-194)||(998-1037)


Alignment Details
Target: chr1 (Bit Score: 203; Significance: 1e-110; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 294 - 496
Target Start/End: Complemental strand, 48110035 - 48109833
Alignment:
Q  294 gttttagataggttgattatcttttatttttgcgaggttttcatagtggataattagcaactgattaaaaaatgatacattagtccaaaacaccactcgt 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48110035 gttttagataggttgattatcttttatttttgcgaggttttcatagtggataattagcaactgattaaaaaatgatacattagtccaaaacaccactcgt 48109936  T
Q  394 tatttctttactactataaccataagaaacatcacgttatcttgatttcagtgaatggtagtagtggtttcatcactcgatgcctgccacaatactatat 493  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48109935 tatttctttactactataaccataagaaacatcacgttatcttgatttcagtgaatggtagtagtggtttcatcactcgatgcctgccacaatactatat 48109836  T
Q  494 ata 496  Q
    |||    
T  48109835 ata 48109833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 496 - 591
Target Start/End: Complemental strand, 48109807 - 48109712
Alignment:
Q  496 aatttaatccaaccaaactggactgatagtcggtgcaattttagcttcgagttatatgtagcttgcaacctataaatggtgtaaactccaccatta 591  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48109807 aatttaatccaaccaaactggactgatagtcggtgcaattttagcttcgagttatatgtagcttgcaacctataaatggtgtaaactccaccatta 48109712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 5496584 - 5496545
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  5496584 aaatttaatttgacaccttggtgtcatttgatcctatccc 5496545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 7013052 - 7013091
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  7013052 aaatttaatttgacaccttggtgtcatttgatcctatccc 7013091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 17606302 - 17606263
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  17606302 aaatttaatttgacaccttggtgtcatttgatcctatccc 17606263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 21790789 - 21790750
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  21790789 aaatttaatttgacaccttggtgtcatttgatcctatccc 21790750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 39848894 - 39848933
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  39848894 aaatttaatttgacaccttggtgtcatttgatcctatccc 39848933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 47374860 - 47374899
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  47374860 aaatttaatttgacaccttggtgtcatttgatcctatccc 47374899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 5216600 - 5216561
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  5216600 aaatttaatttgacaccatggtgtcatttgatcctatccc 5216561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 10716949 - 10716988
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  10716949 aaatttaatttgacaccttggtgtcatttgatcttatccc 10716988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 14886846 - 14886885
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  14886846 aaatttaatttgacaccatggtgtcatttgatcctatccc 14886885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 21791498 - 21791537
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  21791498 aaatttaatttgacaccatggtgtcatttgatcctatccc 21791537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 46284793 - 46284754
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  46284793 aaatttaatttgacactttggtgtcatttgatcctatccc 46284754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 46285563 - 46285602
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  46285563 aaatttaatttgacaccttggtgtcatttgatcatatccc 46285602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 16959542 - 16959504
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatcc 193  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  16959542 aaatttaatttgacaccttggtgttatttgatcctatcc 16959504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 29858961 - 29858923
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatcc 193  Q
    ||||||||||||| | |||||||||||||||||||||||    
T  29858961 aaatttaatttgacatcttggtgtcatttgatcctatcc 29858923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 5497304 - 5497341
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatc 192  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  5497304 aaatttaatttgacaccttggtatcatttgatcctatc 5497341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 108; Significance: 6e-54; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 22259405 - 22259524
Alignment:
Q  12 agaaaatagggaataaattaggaaagttgaaatattattatttagaaagcaagtttagattctcatgtcacatgaggattaagtgactaattataaacct 111  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  22259405 agaaaatagggaataaattaggaaagttgaaatattattctttagaaagcaagttcagattctcatgtcacatgaggattaagtgactaattataaatct 22259504  T
Q  112 ttagatcaaataaaataaaa 131  Q
    ||||||||||||||||||||    
T  22259505 ttagatcaaataaaataaaa 22259524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 22259545 - 22259617
Alignment:
Q  119 aaataaaataaaataaaaggttgagatttgatgttaaaatttaatttgataccttggtgtcatttgatcctat 191  Q
    ||||||||||||| |||||||||||||||| ||| |||||||||||||| |||||| ||| ||||||||||||    
T  22259545 aaataaaataaaacaaaaggttgagatttggtgtcaaaatttaatttgacaccttgatgttatttgatcctat 22259617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 5531898 - 5532002
Alignment:
Q  84 tgaggattaagtgactaattataaacctttagatcaaataaaataaaataaaaggttgagatttgatgttaaaatttaatttgataccttggtgtcattt 183  Q
    ||||||||| |||| |||||||||| |||||||| ||||     |||||||| || ||||||||| ||| ||||||||||| || | ||| |||||||||    
T  5531898 tgaggattaggtgattaattataaatctttagatgaaat-----aaaataaagggatgagatttggtgtcaaaatttaattcgacatcttagtgtcattt 5531992  T
Q  184 gatcctatcc 193  Q
    ||||||||||    
T  5531993 gatcctatcc 5532002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 20200625 - 20200664
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  20200625 aaatttaatttgacaccttggtgtcatttgatcctatccc 20200664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 20202809 - 20202848
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  20202809 aaatttaatttgacaccttggtgtcatttgatcctatccc 20202848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 47167926 - 47167887
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  47167926 aaatttaatttgacaccttggtgtcatttgatcctatccc 47167887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 53950094 - 53950133
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  53950094 aaatttaatttgacaccttggtgtcatttgatcctatccc 53950133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 54584869 - 54584935
Alignment:
Q  127 taaaataaaaggttgagatttgatgttaaaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||| | |||| ||||||||||||||| |||| ||||| ||| ||||||||||||||||||||||    
T  54584869 taaaatagatggttaagatttgatgttaaa-tttagtttgacaccatggtgtcatttgatcctatccc 54584935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 30834448 - 30834486
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatcc 193  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  30834448 aaatttaatttgataccttgatgtcatttgatcctatcc 30834486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 53949330 - 53949368
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatcc 193  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  53949330 aaatttaatttgacaccttggtgtcatttgatcctatcc 53949368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 20199906 - 20199870
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctat 191  Q
    ||||||||||||| |||||||||||||||||||||||    
T  20199906 aaatttaatttgacaccttggtgtcatttgatcctat 20199870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 11238555 - 11238516
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  11238555 aaatttaatttgacaccttgatgtcatttgatcctatccc 11238516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 53948699 - 53948660
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  53948699 aaatttaatttgacaccatggtgtcatttgatcctatccc 53948660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 47169174 - 47169212
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatcc 193  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  47169174 aaatttaatttgacaccttggtgtcatttgatcttatcc 47169212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 22258909 - 22258853
Alignment:
Q  130 aataaaaggttgagatttgatgttaaaatttaatttgataccttggtgtcatttgatc 187  Q
    |||||| |||||||||||||||| || ||| ||||||| || ||||||||||||||||    
T  22258909 aataaatggttgagatttgatgtcaagatt-aatttgacacattggtgtcatttgatc 22258853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 155 - 187
Target Start/End: Complemental strand, 30833720 - 30833688
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatc 187  Q
    ||||||||||||| |||||||||||||||||||    
T  30833720 aaatttaatttgacaccttggtgtcatttgatc 30833688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 43400785 - 43400821
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctat 191  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  43400785 aaatttaatttgacaccatggtgtcatttgatcctat 43400821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 5e-39; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 25 - 191
Target Start/End: Complemental strand, 4899576 - 4899415
Alignment:
Q  25 taaattaggaaagttgaaatattattatttagaaagcaagtttagattctcatgtcacatgaggattaagtgactaattataaacctttagatcaaataa 124  Q
    ||||||||| ||||||| |||||||| ||||||| |||| |  | ||| ||||||||||||| |||||||||||||||||||||||||| ||||     |    
T  4899576 taaattaggtaagttgagatattattctttagaaggcaattgcaaattttcatgtcacatgatgattaagtgactaattataaacctttggatc-----a 4899482  T
Q  125 aataaaataaaaggttgagatttgatgttaaaatttaatttgataccttggtgtcatttgatcctat 191  Q
    |||| ||||||||||||||||||| ||| |||||||||||||| ||||||||| |||||||||||||    
T  4899481 aatataataaaaggttgagatttggtgtcaaaatttaatttgacaccttggtggcatttgatcctat 4899415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 137 - 194
Target Start/End: Original strand, 550318 - 550375
Alignment:
Q  137 ggttgagatttgatgttaaaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    |||| ||||||||||| |||||||| ||||| ||| ||||||||||||||||||||||    
T  550318 ggttaagatttgatgtcaaaatttagtttgacaccatggtgtcatttgatcctatccc 550375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 29212047 - 29212008
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  29212047 aaatttaatttgacaccttggtgtcatttgatcctatccc 29212008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 41695423 - 41695384
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  41695423 aaatttaatttgacaccttggtgtcatttgatcctatccc 41695384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 45919550 - 45919511
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  45919550 aaatttaatttgacaccttggtgtcatttgatcctatccc 45919511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 13387761 - 13387825
Alignment:
Q  129 aaataaaaggttgagatttgatgttaaaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||| |||||||||||| |||||||| ||||||||| | |||||||||| |||||| ||||||    
T  13387761 aaataaagggttgagatttggtgttaaaa-ttaatttgacatcttggtgtcaattgatcatatccc 13387825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 41696137 - 41696176
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| |||||||| |||||||||||||||||    
T  41696137 aaatttaatttgacaccttggtatcatttgatcctatccc 41696176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 46619644 - 46619683
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  46619644 aaatttaatttgacaccttggtgtcatttgatcatatccc 46619683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 194
Target Start/End: Complemental strand, 4157818 - 4157780
Alignment:
Q  156 aatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  4157818 aattaaatttgacaccttggtgtcatttgatcctatccc 4157780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 21825164 - 21825202
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatcc 193  Q
    ||||||||||||| ||| |||||||||||||||||||||    
T  21825164 aaatttaatttgacaccatggtgtcatttgatcctatcc 21825202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 194
Target Start/End: Original strand, 4900130 - 4900186
Alignment:
Q  137 ggttgagatttgatgttaaaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    |||||||||||| ||| || ||| ||||||| |||||||||||||||||||| |||||    
T  4900130 ggttgagatttggtgtcaagatt-aatttgacaccttggtgtcatttgatcccatccc 4900186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 4e-18; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 4962437 - 4962374
Alignment:
Q  124 aaataaaataaaaggttgagatttgatgttaaaatttaatttgataccttggtgtcatttgatc 187  Q
    ||||| ||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||    
T  4962437 aaatataataaaaggttgagatttggtgtcaaaatttaatttgacaccttggtgtcatttgatc 4962374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 3162908 - 3162869
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  3162908 aaatttaatttgacaccttggtgtcatttgatcctatccc 3162869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 8487068 - 8487029
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  8487068 aaatttaatttgacaccttggtgtcatttgatcctatccc 8487029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 8512743 - 8512704
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  8512743 aaatttaatttgacaccttggtgtcatttgatcctatccc 8512704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 8513480 - 8513519
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  8513480 aaatttaatttgacaccttggtgtcatttgatcctatccc 8513519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 30469551 - 30469512
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  30469551 aaatttaatttgacaccttggtgtcatttgatcctatccc 30469512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 31179935 - 31179974
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  31179935 aaatttaatttgacaccttggtgtcatttgatcctatccc 31179974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 38059886 - 38059847
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  38059886 aaatttaatttgacaccttggtgtcatttgatcctatccc 38059847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 3163514 - 3163553
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  3163514 aaatttaatttgacaccatggtgtcatttgatcctatccc 3163553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 8487825 - 8487864
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  8487825 aaatttaatttgacaccttcgtgtcatttgatcctatccc 8487864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 30659894 - 30659855
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  30659894 aaatttaatttgacaccatggtgtcatttgatcctatccc 30659855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 190
Target Start/End: Complemental strand, 43742759 - 43742724
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatccta 190  Q
    |||||||||||||||||||| |||||||||||||||    
T  43742759 aaatttaatttgataccttgatgtcatttgatccta 43742724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 46428135 - 46428174
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  46428135 aaatttaatttgacaccatggtgtcatttgatcctatccc 46428174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 193
Target Start/End: Complemental strand, 43334165 - 43334131
Alignment:
Q  159 ttaatttgataccttggtgtcatttgatcctatcc 193  Q
    ||||||||| |||||||||||||||||||||||||    
T  43334165 ttaatttgacaccttggtgtcatttgatcctatcc 43334131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 190
Target Start/End: Complemental strand, 3219341 - 3219308
Alignment:
Q  157 atttaatttgataccttggtgtcatttgatccta 190  Q
    ||||||||||| ||||||||||||||||||||||    
T  3219341 atttaatttgacaccttggtgtcatttgatccta 3219308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 190
Target Start/End: Original strand, 21415413 - 21415446
Alignment:
Q  157 atttaatttgataccttggtgtcatttgatccta 190  Q
    ||||||||||| ||||||||||||||||||||||    
T  21415413 atttaatttgacaccttggtgtcatttgatccta 21415446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 39861657 - 39861707
Alignment:
Q  143 gatttgatgttaaaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  39861657 gatttgatgttaaa-tttaatttgacaccttggtgtcatttgatcctatccc 39861707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 5881182 - 5881143
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  5881182 aaatttaatttgacaccttggtgtcatttgatcctatccc 5881143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 25128625 - 25128586
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  25128625 aaatttaatttgacaccttggtgtcatttgatcttatccc 25128586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 42986685 - 42986646
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  42986685 aaatttaatttgacactttggtgtcatttgatcctatccc 42986646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 155 - 189
Target Start/End: Original strand, 5332190 - 5332224
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcct 189  Q
    ||||||||||||| |||||||||||||||||||||    
T  5332190 aaatttaatttgacaccttggtgtcatttgatcct 5332224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 105549 - 105510
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  105549 aaatttaatttgacaccttggtgtcatttgatcctatccc 105510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 106306 - 106345
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  106306 aaatttaatttgacaccttggtgtcatttgatcatatccc 106345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000006; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 19651110 - 19651071
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  19651110 aaatttaatttgacaccttggtgtcatttgatcctatccc 19651071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 19653881 - 19653920
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  19653881 aaatttaatttgacaccttggtgtcatttgatcctatccc 19653920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 8992946 - 8992907
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  8992946 aaatttaatttgacaccatggtgtcatttgatcctatccc 8992907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 8993601 - 8993640
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  8993601 aaatttaatttgacaccgtggtgtcatttgatcctatccc 8993640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 9017393 - 9017354
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  9017393 aaatttaatttgacaccatggtgtcatttgatcctatccc 9017354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 9018048 - 9018087
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  9018048 aaatttaatttgacaccgtggtgtcatttgatcctatccc 9018087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 18153297 - 18153258
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  18153297 aaatttaatttgacactttggtgtcatttgatcctatccc 18153258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 18649915 - 18649954
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  18649915 aaatttaatttgacaccatggtgtcatttgatcctatccc 18649954  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 9280909 - 9280946
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatc 192  Q
    ||||||||||||| || |||||||||||||||||||||    
T  9280909 aaatttaatttgacacattggtgtcatttgatcctatc 9280946  T

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Target: chr5 (Bit Score: 36; Significance: 0.00000000006; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 21145975 - 21145936
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  21145975 aaatttaatttgacaccttggtgtcatttgatcctatccc 21145936  T

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Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 23206211 - 23206250
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  23206211 aaatttaatttgacaccttggtgtcatttgatcctatccc 23206250  T

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Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 42521708 - 42521747
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  42521708 aaatttaatttgacaccttggtgtcatttgatcctatccc 42521747  T

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Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 21148114 - 21148151
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatc 192  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  21148114 aaatttaatttgacaccttggtgtcatttgatcctatc 21148151  T

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Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 153 - 194
Target Start/End: Complemental strand, 42520658 - 42520617
Alignment:
Q  153 taaaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  42520658 taaaatttaatatgacaccttggtgtcatttgatcctatccc 42520617  T

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Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 42520448 - 42520486
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatcc 193  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  42520448 aaatttaatttgacaccttggtgttatttgatcctatcc 42520486  T

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Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 11768893 - 11768841
Alignment:
Q  142 agatttgatgttaaaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||| ||| |||||||| ||||| ||| || |||||||||||||||||||    
T  11768893 agatttggtgtcaaaatttagtttgacaccatgatgtcatttgatcctatccc 11768841  T

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Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 155 - 187
Target Start/End: Complemental strand, 42519679 - 42519647
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatc 187  Q
    ||||||||||||| |||||||||||||||||||    
T  42519679 aaatttaatttgacaccttggtgtcatttgatc 42519647  T

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Target: chr2 (Bit Score: 36; Significance: 0.00000000006; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 122971 - 123010
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  122971 aaatttaatttgacaccttggtgtcatttgatcctatccc 123010  T

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Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 4776993 - 4777032
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  4776993 aaatttaatttgacaccttggtgtcatttgatcctatccc 4777032  T

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Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 19386935 - 19386974
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  19386935 aaatttaatttgataccttggtgtaatttgatcctatccc 19386974  T

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Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 42849515 - 42849554
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  42849515 aaatttaatttgacaccttggtgtcatttgatcctatccc 42849554  T

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Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 8911853 - 8911892
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  8911853 aaatttaatttgacaccatggtgtcatttgatcctatccc 8911892  T

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Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 39629531 - 39629570
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  39629531 aaatttaatttgacaccttggtgtcatttgatcatatccc 39629570  T

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Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 44926691 - 44926641
Alignment:
Q  143 gatttgatgttaaaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    |||||||||| |||||||||||||| |||||| |||||||||||| ||||||    
T  44926691 gatttgatgt-aaaatttaatttgacaccttgatgtcatttgatcatatccc 44926641  T

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Target: scaffold0301 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 20769 - 20732
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatc 192  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  20769 aaatttaatttgacaccttggtgtcatttgatcctatc 20732  T

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Target: scaffold0853 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 654 - 615
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  654 aaatttaatttgacacattggtgtcatttgatcctatccc 615  T

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Target: scaffold0188 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 25653 - 25614
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  25653 aaatttaatttgacacattggtgtcatttgatcctatccc 25614  T

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Target: scaffold0155 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 1037 - 998
Alignment:
Q  155 aaatttaatttgataccttggtgtcatttgatcctatccc 194  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  1037 aaatttaatttgacactttggtgtcatttgatcctatccc 998  T

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