View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18814_high_4 (Length: 281)
Name: NF18814_high_4
Description: NF18814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18814_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 121 - 266
Target Start/End: Complemental strand, 2428546 - 2428400
Alignment:
| Q |
121 |
gtcgctgacatgttcttttcttcttctcacacaatttt-atatatatttttctcattgaatttctccagttaggtaacacttcaacttctgctgaatcag |
219 |
Q |
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| T |
2428546 |
gtcgctgacatgttcttttcttcttctcacacaatttttatatatatttttctcattgaatttctccaattaggtaacacttcaacttctgctgaatcag |
2428447 |
T |
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| Q |
220 |
atttcaccatgtgaaacaaagtacaaacaacataaaggtgagtttgt |
266 |
Q |
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| T |
2428446 |
atttcaccatgtgaaacaaagtacaaacaacataaaggtgagtttgt |
2428400 |
T |
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