View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18815_low_1 (Length: 690)

Name: NF18815_low_1
Description: NF18815
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18815_low_1
NF18815_low_1
[»] chr1 (59 HSPs)
chr1 (290-510)||(37214843-37215065)
chr1 (390-533)||(32572936-32573080)
chr1 (394-532)||(40264048-40264187)
chr1 (391-534)||(23536067-23536211)
chr1 (414-532)||(34756465-34756584)
chr1 (414-532)||(50005117-50005236)
chr1 (414-532)||(38277453-38277571)
chr1 (414-534)||(15034697-15034818)
chr1 (414-529)||(28745835-28745950)
chr1 (414-534)||(4038075-4038196)
chr1 (392-534)||(27935502-27935644)
chr1 (425-530)||(27804269-27804375)
chr1 (445-534)||(30190206-30190295)
chr1 (426-534)||(44410361-44410470)
chr1 (448-534)||(25889158-25889243)
chr1 (394-531)||(45565397-45565535)
chr1 (414-534)||(4038113-4038234)
chr1 (414-534)||(15034659-15034780)
chr1 (390-496)||(5474437-5474549)
chr1 (464-534)||(38277415-38277485)
chr1 (394-462)||(15245460-15245529)
chr1 (392-492)||(17502222-17502323)
chr1 (391-459)||(48953584-48953652)
chr1 (459-534)||(8224768-8224843)
chr1 (459-534)||(24273218-24273293)
chr1 (459-534)||(34756427-34756502)
chr1 (468-531)||(37036956-37037019)
chr1 (414-496)||(45565432-45565515)
chr1 (419-532)||(28745799-28745912)
chr1 (459-534)||(6470684-6470759)
chr1 (459-534)||(26501077-26501152)
chr1 (467-534)||(31166310-31166377)
chr1 (459-534)||(50005079-50005154)
chr1 (459-532)||(28632584-28632656)
chr1 (394-501)||(5474417-5474525)
chr1 (459-534)||(44410311-44410386)
chr1 (459-534)||(47165210-47165285)
chr1 (459-532)||(34003379-34003452)
chr1 (419-534)||(27804308-27804424)
chr1 (394-496)||(17502198-17502301)
chr1 (471-534)||(29446750-29446813)
chr1 (392-458)||(32128046-32128113)
chr1 (464-534)||(10166499-10166569)
chr1 (468-534)||(32287940-32288006)
chr1 (391-492)||(34007355-34007452)
chr1 (459-525)||(37448399-37448465)
chr1 (394-459)||(41823149-41823215)
chr1 (464-534)||(43622981-43623051)
chr1 (394-459)||(50471768-50471834)
chr1 (459-516)||(31195474-31195531)
chr1 (459-527)||(37447900-37447968)
chr1 (390-429)||(30190260-30190299)
chr1 (394-492)||(34007382-34007476)
chr1 (459-534)||(49659217-49659291)
chr1 (391-429)||(24273258-24273296)
chr1 (459-525)||(44570687-44570753)
chr1 (446-492)||(47074177-47074223)
chr1 (414-454)||(29446788-29446828)
chr1 (400-459)||(44571226-44571285)
[»] chr3 (56 HSPs)
chr3 (391-534)||(46429411-46429555)
chr3 (419-534)||(47284269-47284385)
chr3 (414-515)||(31070444-31070546)
chr3 (390-534)||(27251908-27252053)
chr3 (394-534)||(28092214-28092355)
chr3 (394-532)||(39215857-39215995)
chr3 (414-534)||(9129382-9129503)
chr3 (414-534)||(9137489-9137610)
chr3 (414-534)||(44692860-44692981)
chr3 (414-534)||(5415783-5415904)
chr3 (423-532)||(42130694-42130804)
chr3 (390-534)||(44436258-44436408)
chr3 (394-496)||(332012-332116)
chr3 (414-501)||(44436296-44436384)
chr3 (424-534)||(46672770-46672875)
chr3 (394-496)||(25655335-25655438)
chr3 (443-534)||(39110394-39110485)
chr3 (414-534)||(44692822-44692943)
chr3 (414-534)||(9129344-9129465)
chr3 (414-534)||(9137451-9137572)
chr3 (477-534)||(49457343-49457400)
chr3 (459-534)||(5415867-5415942)
chr3 (459-530)||(21307529-21307600)
chr3 (459-534)||(36397986-36398061)
chr3 (459-534)||(53129840-53129915)
chr3 (464-534)||(47767432-47767502)
chr3 (465-534)||(31189400-31189469)
chr3 (478-534)||(7302346-7302402)
chr3 (478-534)||(46001364-46001420)
chr3 (459-526)||(31070415-31070481)
chr3 (459-534)||(37321550-37321625)
chr3 (391-496)||(25655312-25655418)
chr3 (464-534)||(37054394-37054464)
chr3 (480-534)||(42005971-42006025)
chr3 (464-534)||(53470431-53470501)
chr3 (400-439)||(27485478-27485517)
chr3 (459-534)||(34088571-34088646)
chr3 (394-459)||(2104752-2104818)
chr3 (480-530)||(35279920-35279970)
chr3 (477-534)||(46635857-46635914)
chr3 (390-462)||(47284188-47284261)
chr3 (478-534)||(671635-671691)
chr3 (395-462)||(38506861-38506929)
chr3 (389-429)||(47767427-47767467)
chr3 (392-450)||(331991-332049)
chr3 (459-526)||(19475824-19475891)
chr3 (471-534)||(21730902-21730965)
chr3 (503-534)||(47284226-47284257)
chr3 (459-534)||(48947605-48947680)
chr3 (391-425)||(28092211-28092245)
chr3 (391-429)||(36398026-36398064)
chr3 (394-459)||(54761552-54761618)
chr3 (477-530)||(1146960-1147013)
chr3 (459-516)||(30766571-30766628)
chr3 (392-429)||(46672840-46672877)
chr3 (465-532)||(34396510-34396578)
[»] chr4 (56 HSPs)
chr4 (392-532)||(26250911-26251052)
chr4 (414-534)||(15660183-15660304)
chr4 (414-532)||(10127976-10128095)
chr4 (419-532)||(42844586-42844700)
chr4 (410-534)||(11040968-11041092)
chr4 (419-534)||(41498533-41498649)
chr4 (414-534)||(857277-857398)
chr4 (445-534)||(49111382-49111471)
chr4 (422-534)||(28845917-28846030)
chr4 (414-534)||(1107051-1107173)
chr4 (414-534)||(7352850-7352971)
chr4 (466-534)||(4896648-4896716)
chr4 (394-534)||(14982280-14982420)
chr4 (467-534)||(15660275-15660342)
chr4 (459-532)||(4896716-4896789)
chr4 (459-534)||(2125857-2125932)
chr4 (414-532)||(7352814-7352933)
chr4 (465-532)||(31742778-31742845)
chr4 (464-534)||(1112605-1112675)
chr4 (464-534)||(31473849-31473919)
chr4 (446-492)||(46724195-46724241)
chr4 (464-531)||(10633035-10633102)
chr4 (459-534)||(36455907-36455982)
chr4 (468-534)||(5715744-5715810)
chr4 (390-459)||(42775619-42775689)
chr4 (477-534)||(1107154-1107211)
chr4 (477-533)||(4441338-4441394)
chr4 (414-529)||(28845876-28845992)
chr4 (467-534)||(10128066-10128133)
chr4 (414-472)||(36455945-36456004)
chr4 (464-526)||(1539649-1539711)
chr4 (443-496)||(4441396-4441449)
chr4 (477-534)||(11348339-11348396)
chr4 (391-459)||(53760779-53760848)
chr4 (395-450)||(4441412-4441468)
chr4 (459-534)||(1112706-1112781)
chr4 (414-492)||(14982318-14982396)
chr4 (459-534)||(36456010-36456085)
chr4 (414-507)||(857266-857360)
chr4 (480-534)||(16516171-16516225)
chr4 (392-472)||(12914060-12914141)
chr4 (485-534)||(31742874-31742923)
chr4 (468-532)||(19461743-19461807)
chr4 (451-534)||(467879-467960)
chr4 (465-508)||(21012499-21012542)
chr4 (459-534)||(35470122-35470197)
chr4 (400-459)||(46243086-46243144)
chr4 (402-459)||(17727091-17727149)
chr4 (446-488)||(32724961-32725003)
chr4 (464-534)||(55266864-55266934)
chr4 (392-429)||(31473847-31473884)
chr4 (392-429)||(36455905-36455942)
chr4 (487-532)||(42542979-42543024)
chr4 (392-429)||(49111436-49111473)
chr4 (459-507)||(29091164-29091212)
chr4 (392-459)||(56339149-56339217)
[»] chr2 (53 HSPs)
chr2 (390-534)||(14537199-14537344)
chr2 (414-532)||(41461517-41461636)
chr2 (414-534)||(14365700-14365820)
chr2 (390-496)||(11824718-11824825)
chr2 (414-492)||(27033528-27033607)
chr2 (441-534)||(11716408-11716501)
chr2 (449-532)||(44256181-44256263)
chr2 (400-496)||(3345769-3345867)
chr2 (414-534)||(784793-784914)
chr2 (467-534)||(17180297-17180364)
chr2 (459-534)||(41461599-41461674)
chr2 (459-532)||(11532251-11532324)
chr2 (459-532)||(11793897-11793970)
chr2 (459-534)||(784877-784952)
chr2 (459-534)||(27033490-27033565)
chr2 (394-530)||(11684603-11684731)
chr2 (414-496)||(10244215-10244298)
chr2 (459-534)||(10480119-10480194)
chr2 (441-496)||(11684656-11684711)
chr2 (459-534)||(17905654-17905729)
chr2 (390-459)||(8736430-8736500)
chr2 (402-534)||(10244177-10244310)
chr2 (477-534)||(14365801-14365858)
chr2 (459-534)||(769036-769111)
chr2 (459-534)||(1583807-1583882)
chr2 (459-534)||(13017779-13017854)
chr2 (459-534)||(33189255-33189330)
chr2 (459-534)||(35047677-35047752)
chr2 (464-534)||(11141305-11141375)
chr2 (414-534)||(14954266-14954388)
chr2 (480-534)||(45094490-45094544)
chr2 (477-526)||(11716501-11716550)
chr2 (391-462)||(21504465-21504537)
chr2 (400-458)||(11607245-11607304)
chr2 (468-531)||(28740599-28740662)
chr2 (464-526)||(30698289-30698351)
chr2 (471-533)||(30751356-30751418)
chr2 (390-459)||(32840181-32840251)
chr2 (400-496)||(11824704-11824801)
chr2 (459-528)||(40026070-40026139)
chr2 (390-496)||(3345783-3345891)
chr2 (392-459)||(20935723-20935790)
chr2 (400-458)||(11595343-11595402)
chr2 (459-498)||(11595355-11595394)
chr2 (471-534)||(39630225-39630288)
chr2 (391-429)||(1583847-1583885)
chr2 (480-534)||(7228031-7228085)
chr2 (485-534)||(11981580-11981629)
chr2 (400-433)||(19231301-19231334)
chr2 (464-508)||(7167670-7167714)
chr2 (459-503)||(14954351-14954395)
chr2 (459-507)||(32839646-32839694)
chr2 (419-459)||(39630268-39630308)
[»] chr6 (23 HSPs)
chr6 (414-534)||(9763050-9763171)
chr6 (414-532)||(6919710-6919828)
chr6 (394-534)||(9285647-9285788)
chr6 (414-496)||(9285685-9285768)
chr6 (414-534)||(776080-776201)
chr6 (414-534)||(6919746-6919866)
chr6 (468-534)||(34244987-34245053)
chr6 (459-532)||(9763014-9763087)
chr6 (459-534)||(29889432-29889507)
chr6 (464-534)||(13487275-13487345)
chr6 (464-530)||(15299514-15299579)
chr6 (464-534)||(28918165-28918235)
chr6 (394-458)||(1195351-1195416)
chr6 (477-534)||(8574695-8574752)
chr6 (477-534)||(8574767-8574824)
chr6 (459-534)||(1368477-1368552)
chr6 (459-534)||(776164-776239)
chr6 (390-429)||(9285643-9285682)
chr6 (394-459)||(8475179-8475245)
chr6 (464-530)||(15832470-15832536)
chr6 (392-429)||(33733430-33733467)
chr6 (464-516)||(15299417-15299469)
chr6 (494-534)||(33733432-33733472)
[»] chr7 (52 HSPs)
chr7 (414-534)||(5644715-5644836)
chr7 (414-534)||(29065857-29065978)
chr7 (390-534)||(40853983-40854129)
chr7 (414-534)||(21635885-21636006)
chr7 (394-532)||(46069404-46069545)
chr7 (414-534)||(44915195-44915316)
chr7 (414-534)||(2057395-2057516)
chr7 (414-534)||(40110775-40110897)
chr7 (414-534)||(49052786-49052906)
chr7 (421-534)||(34388310-34388424)
chr7 (414-532)||(43955555-43955671)
chr7 (459-534)||(35776939-35777014)
chr7 (414-534)||(40110737-40110859)
chr7 (394-473)||(31913236-31913316)
chr7 (459-534)||(26162121-26162196)
chr7 (459-534)||(31632722-31632797)
chr7 (414-534)||(43955517-43955635)
chr7 (477-534)||(2057497-2057554)
chr7 (459-534)||(5644677-5644752)
chr7 (459-530)||(23455231-23455302)
chr7 (459-534)||(28539152-28539227)
chr7 (459-534)||(29065819-29065894)
chr7 (468-534)||(6498758-6498824)
chr7 (468-534)||(25189219-25189285)
chr7 (465-534)||(34398938-34399008)
chr7 (419-534)||(34388265-34388381)
chr7 (459-534)||(29639199-29639274)
chr7 (459-534)||(39342626-39342701)
chr7 (464-533)||(9784920-9784989)
chr7 (477-534)||(14603264-14603321)
chr7 (391-459)||(32650588-32650657)
chr7 (477-534)||(35455804-35455861)
chr7 (464-532)||(22391576-22391644)
chr7 (459-534)||(18789230-18789305)
chr7 (459-534)||(23548595-23548670)
chr7 (487-534)||(29195709-29195756)
chr7 (391-459)||(13814969-13815038)
chr7 (395-459)||(30587878-30587943)
chr7 (414-534)||(46481984-46482104)
chr7 (389-429)||(34398973-34399013)
chr7 (464-508)||(43791116-43791160)
chr7 (389-459)||(30080776-30080847)
chr7 (391-429)||(28539192-28539230)
chr7 (459-501)||(46069424-46069466)
chr7 (483-532)||(18926812-18926861)
chr7 (503-536)||(19865564-19865597)
chr7 (467-528)||(21635977-21636038)
chr7 (392-429)||(26162161-26162198)
chr7 (477-534)||(30524255-30524312)
chr7 (392-429)||(35455802-35455839)
chr7 (400-459)||(14790138-14790197)
chr7 (477-525)||(22351874-22351922)
[»] chr8 (50 HSPs)
chr8 (414-532)||(3853654-3853773)
chr8 (414-532)||(3858112-3858231)
chr8 (414-532)||(13404829-13404948)
chr8 (414-534)||(17110869-17110990)
chr8 (394-492)||(42739949-42740048)
chr8 (454-534)||(37268086-37268166)
chr8 (393-530)||(30435250-30435386)
chr8 (394-534)||(14799979-14800119)
chr8 (390-534)||(42711300-42711439)
chr8 (457-517)||(40046872-40046932)
chr8 (459-534)||(3853616-3853691)
chr8 (459-534)||(3858074-3858149)
chr8 (459-534)||(24044960-24045035)
chr8 (414-534)||(33902705-33902825)
chr8 (414-534)||(17110907-17111028)
chr8 (391-459)||(34008796-34008865)
chr8 (477-532)||(4156269-4156324)
chr8 (471-534)||(31807409-31807471)
chr8 (476-534)||(14991692-14991750)
chr8 (390-459)||(29611384-29611454)
chr8 (477-534)||(33902667-33902724)
chr8 (394-496)||(38573433-38573541)
chr8 (459-534)||(11744727-11744802)
chr8 (414-496)||(14799999-14800081)
chr8 (459-534)||(23011734-23011809)
chr8 (459-534)||(29257359-29257434)
chr8 (459-534)||(33377305-33377380)
chr8 (467-534)||(40046804-40046871)
chr8 (459-534)||(44889354-44889429)
chr8 (394-459)||(30444932-30444998)
chr8 (464-534)||(33986004-33986074)
chr8 (477-534)||(28324688-28324745)
chr8 (459-532)||(29482815-29482888)
chr8 (391-439)||(7202924-7202972)
chr8 (400-459)||(26520438-26520498)
chr8 (459-530)||(44346686-44346757)
chr8 (464-534)||(14239-14308)
chr8 (467-517)||(13404919-13404969)
chr8 (468-534)||(36103101-36103167)
chr8 (414-473)||(4156228-4156288)
chr8 (394-449)||(7202865-7202921)
chr8 (465-517)||(8049271-8049323)
chr8 (486-534)||(32626069-32626117)
chr8 (395-459)||(34388527-34388591)
chr8 (459-531)||(35979012-35979084)
chr8 (459-534)||(9982637-9982711)
chr8 (468-534)||(515549-515615)
chr8 (391-429)||(29257399-29257437)
chr8 (469-534)||(1088295-1088360)
chr8 (489-534)||(27322687-27322732)
[»] chr5 (63 HSPs)
chr5 (400-532)||(28828373-28828504)
chr5 (414-534)||(9764376-9764497)
chr5 (414-534)||(15373960-15374081)
chr5 (419-534)||(32390015-32390131)
chr5 (429-534)||(6634015-6634120)
chr5 (414-534)||(20523133-20523254)
chr5 (419-534)||(2316421-2316537)
chr5 (459-534)||(37722889-37722964)
chr5 (414-534)||(9764338-9764459)
chr5 (414-534)||(15373998-15374119)
chr5 (390-534)||(40643832-40643976)
chr5 (414-534)||(40809341-40809462)
chr5 (414-532)||(32389974-32390093)
chr5 (414-496)||(40643856-40643938)
chr5 (421-533)||(20523178-20523291)
chr5 (464-532)||(2721560-2721628)
chr5 (456-536)||(15804320-15804400)
chr5 (459-534)||(40090409-40090484)
chr5 (394-459)||(22305112-22305178)
chr5 (414-534)||(32470920-32471039)
chr5 (441-530)||(16515009-16515097)
chr5 (414-534)||(23092000-23092121)
chr5 (391-459)||(33146188-33146257)
chr5 (459-534)||(16515102-16515177)
chr5 (459-534)||(22766952-22767027)
chr5 (459-534)||(25935285-25935360)
chr5 (459-534)||(26281264-26281339)
chr5 (414-534)||(2316378-2316500)
chr5 (459-533)||(3563278-3563352)
chr5 (464-534)||(22303870-22303940)
chr5 (394-462)||(15270837-15270906)
chr5 (479-532)||(28828369-28828422)
chr5 (414-534)||(32470882-32471003)
chr5 (394-449)||(2550328-2550384)
chr5 (464-532)||(19533907-19533975)
chr5 (459-534)||(927302-927377)
chr5 (485-532)||(13243514-13243561)
chr5 (459-534)||(41762210-41762285)
chr5 (479-534)||(13243457-13243514)
chr5 (402-462)||(17542344-17542405)
chr5 (477-534)||(23091963-23092019)
chr5 (477-534)||(32250111-32250167)
chr5 (477-534)||(35379344-35379400)
chr5 (480-532)||(15804399-15804451)
chr5 (464-532)||(37145501-37145569)
chr5 (459-530)||(9894317-9894388)
chr5 (391-433)||(33146058-33146100)
chr5 (390-439)||(22302535-22302584)
chr5 (391-459)||(28490008-28490076)
chr5 (477-534)||(34982216-34982272)
chr5 (477-533)||(33245385-33245441)
chr5 (391-439)||(34982303-34982351)
chr5 (390-429)||(22303905-22303944)
chr5 (400-458)||(28489487-28489546)
chr5 (470-516)||(8255045-8255091)
chr5 (464-534)||(11601040-11601109)
chr5 (414-462)||(3563315-3563364)
chr5 (395-459)||(12064454-12064519)
chr5 (485-526)||(12991333-12991374)
chr5 (392-429)||(22766950-22766987)
chr5 (414-534)||(40809379-40809500)
chr5 (459-531)||(6634098-6634170)
chr5 (464-532)||(14834826-14834894)
[»] scaffold1562 (2 HSPs)
scaffold1562 (414-532)||(443-562)
scaffold1562 (477-534)||(405-462)
[»] scaffold1158 (2 HSPs)
scaffold1158 (414-532)||(2031-2150)
scaffold1158 (477-534)||(2131-2188)
[»] scaffold0449 (1 HSPs)
scaffold0449 (558-651)||(4190-4286)
[»] scaffold0044 (2 HSPs)
scaffold0044 (414-501)||(56307-56395)
scaffold0044 (394-530)||(56287-56429)
[»] scaffold0400 (1 HSPs)
scaffold0400 (459-533)||(4496-4570)
[»] scaffold0365 (1 HSPs)
scaffold0365 (459-533)||(5140-5214)
[»] scaffold0240 (1 HSPs)
scaffold0240 (391-472)||(17561-17643)
[»] scaffold0129 (2 HSPs)
scaffold0129 (459-532)||(19200-19272)
scaffold0129 (464-532)||(19788-19855)
[»] scaffold0169 (2 HSPs)
scaffold0169 (459-534)||(4075-4150)
scaffold0169 (414-459)||(4113-4159)
[»] scaffold0009 (3 HSPs)
scaffold0009 (459-534)||(41997-42072)
scaffold0009 (477-534)||(42080-42137)
scaffold0009 (414-454)||(42035-42076)
[»] scaffold0048 (2 HSPs)
scaffold0048 (459-532)||(82945-83018)
scaffold0048 (414-457)||(82981-83025)
[»] scaffold0039 (1 HSPs)
scaffold0039 (392-459)||(109047-109115)
[»] scaffold0318 (2 HSPs)
scaffold0318 (471-534)||(2867-2930)
scaffold0318 (414-459)||(2905-2950)
[»] scaffold0301 (1 HSPs)
scaffold0301 (477-532)||(7153-7208)
[»] scaffold0027 (1 HSPs)
scaffold0027 (459-533)||(10887-10961)


Alignment Details
Target: chr1 (Bit Score: 188; Significance: 1e-101; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 290 - 510
Target Start/End: Complemental strand, 37215065 - 37214843
Alignment:
Q  290 agatgcgatgtttggcttaggttggtttgatgatatatagcaatgacaagattccatgtgatataaaagatactcgtgtgg--aaaagacttccaaggtt 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||    
T  37215065 agatgcgatgtttggcttaggttggtttgatgatatatagcaatgacaagattccatgtgatataaaagatactcgtgtgtgaaaaagacttccaaggtt 37214966  T
Q  388 tgccttagagtatgtttggatgggggaatgctttgagggaattcaactacttgaggtgaattctattgtttgaatccacctcaaaataattgaattccct 487  Q
    ||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  37214965 tgccttagagtgtgtttggatgggagaatgttttgagggaattcaactacttgaggtgaattctattgtttgaatccacctcaaaataattgaattctct 37214866  T
Q  488 caaaacattacattgcctcaaaa 510  Q
    |||||||||||||| ||||||||    
T  37214865 caaaacattacattacctcaaaa 37214843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 390 - 533
Target Start/End: Original strand, 32572936 - 32573080
Alignment:
Q  390 ccttagagtatgtttggatgggggaatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctc 488  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32572936 ccttagagtgtgtttggatgggggaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaagaattgaattccctc 32573035  T
Q  489 aaaacattacattgcctcaaaatattccctcatccaaacacactc 533  Q
    ||||||||||||| ||||||||||||||| ||||||| |||||||    
T  32573036 aaaacattacattacctcaaaatattcccccatccaatcacactc 32573080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 394 - 532
Target Start/End: Original strand, 40264048 - 40264187
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaa 492  Q
    ||||| ||||||||| |||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40264048 agagtgtgtttggataggggaatgttttgagggaattcaactactttgagatgaattctattgtttgaatccacctcaaaataattgaattccctcaaaa 40264147  T
Q  493 cattacattgcctcaaaatattccctcatccaaacacact 532  Q
    ||||||||| ||||||||||||||| ||||||||||||||    
T  40264148 cattacattacctcaaaatattcccccatccaaacacact 40264187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 391 - 534
Target Start/End: Complemental strand, 23536211 - 23536067
Alignment:
Q  391 cttagagtatgtttggatgggggaatgctttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctca 489  Q
    |||||| | |||||||||||||||||| ||||||||||||||||||||| | |||||||| |||||||||||| ||||||||| || |||||||||||||    
T  23536211 cttagaatgtgtttggatgggggaatgttttgagggaattcaactactttaaggtgaattatattgtttgaattcacctcaaagtagttgaattccctca 23536112  T
Q  490 aaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||||||||| |||||||| |||||| ||||||||||||||||    
T  23536111 aaacattacattccctcaaaacattcccccatccaaacacactct 23536067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 414 - 532
Target Start/End: Original strand, 34756465 - 34756584
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  34756465 aatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattatattacctcaaaata 34756564  T
Q  513 ttccctcatccaaacacact 532  Q
    || || ||||||||||||||    
T  34756565 tttccccatccaaacacact 34756584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 414 - 532
Target Start/End: Original strand, 50005117 - 50005236
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| |||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  50005117 aatgttttgagcgaattcaacttctttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaata 50005216  T
Q  513 ttccctcatccaaacacact 532  Q
    ||||  ||||||||||||||    
T  50005217 ttcctccatccaaacacact 50005236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 414 - 532
Target Start/End: Original strand, 38277453 - 38277571
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||| ||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  38277453 aatgttttgaaggaattcaactactttgaggtgaattatattgtttaaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaata 38277552  T
Q  513 ttccctcatccaaacacact 532  Q
    ||||| ||||||||||||||    
T  38277553 ttccc-catccaaacacact 38277571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 414 - 534
Target Start/End: Original strand, 15034697 - 15034818
Alignment:
Q  414 aatgctttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||| |    
T  15034697 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 15034796  T
Q  513 ttccctcatccaaacacactct 534  Q
    ||||| ||||||||||||||||    
T  15034797 ttcccccatccaaacacactct 15034818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 414 - 529
Target Start/End: Original strand, 28745835 - 28745950
Alignment:
Q  414 aatgctttgagggaattcaactacttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatat 513  Q
    |||| ||||||||||||||| || || |||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||| ||| |||||||    
T  28745835 aatggtttgagggaattcaattatttaaggtgaattctattgtttgaattcacctcaaaatagttgaattccctcaaaatattacattcccttaaaatat 28745934  T
Q  514 tccctcatccaaacac 529  Q
    || |||||||||||||    
T  28745935 tctctcatccaaacac 28745950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 414 - 534
Target Start/End: Complemental strand, 4038196 - 4038075
Alignment:
Q  414 aatgctttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||||  ||||||||| || ||||||||||||||||||||||||| |||||||| |    
T  4038196 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 4038097  T
Q  513 ttccctcatccaaacacactct 534  Q
    ||||| || |||||||||||||    
T  4038096 ttcccccacccaaacacactct 4038075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 392 - 534
Target Start/End: Original strand, 27935502 - 27935644
Alignment:
Q  392 ttagagtatgtttggatgggggaatgctttgagggaattcaactacttg-aggtgaattctattgtttgaatccacctcaaaataattgaattccctcaa 490  Q
    ||||||| ||||||||||||  |||| ||||||  |||||||||||||  |||||||||||||||||||||| || |||||| || ||||||| ||||||    
T  27935502 ttagagtgtgtttggatggga-aatgttttgagaaaattcaactactttcaggtgaattctattgtttgaattcaactcaaagtagttgaatttcctcaa 27935600  T
Q  491 aacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||||| |||||||||||| |  ||||||||||||||||    
T  27935601 aacattacattccctcaaaatatttctccatccaaacacactct 27935644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 425 - 530
Target Start/End: Complemental strand, 27804375 - 27804269
Alignment:
Q  425 ggaattcaactacttgaggt-gaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatcc 523  Q
    ||||||||||||||| | || |||||||||||||||||| |||||||||||| |||||||||||||||| |||||||| |||||||| |||||| |||||    
T  27804375 ggaattcaactactttaagttgaattctattgtttgaattcacctcaaaatagttgaattccctcaaaatattacattccctcaaaacattcccccatcc 27804276  T
Q  524 aaacaca 530  Q
    |||||||    
T  27804275 aaacaca 27804269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 445 - 534
Target Start/End: Original strand, 30190206 - 30190295
Alignment:
Q  445 gaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  30190206 gaattctattgtttgaattcacctcaaaatagttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacacactct 30190295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 426 - 534
Target Start/End: Original strand, 44410361 - 44410470
Alignment:
Q  426 gaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatcca 524  Q
    ||||||||||| || ||||||||||||||||| |||||||||   |||||||||||||||||||||||| ||||||| |||||||||||||||  |||||    
T  44410361 gaattcaactattttgaggtgaattctattgtctgaatccactcaaaaataattgaattccctcaaaactttacattacctcaaaatattccccaatcca 44410460  T
Q  525 aacacactct 534  Q
    ||||||||||    
T  44410461 aacacactct 44410470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 448 - 534
Target Start/End: Complemental strand, 25889243 - 25889158
Alignment:
Q  448 ttctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||| || |||||||    
T  25889243 ttctattgtttgaatccacctcaaaataattgaattccttcaaaacatta-attacctcaaaatattccctcatcccaatacactct 25889158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 394 - 531
Target Start/End: Complemental strand, 45565535 - 45565397
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaa 492  Q
    ||||| |||||||||||  ||||| ||||||||||||||||||||| ||||||||||  |    | |||| ||||| |||||| ||||||||||||||||    
T  45565535 agagtgtgtttggatggaagaatgttttgagggaattcaactactttgaggtgaatttaaacaatagaattcaccttaaaatagttgaattccctcaaaa 45565436  T
Q  493 cattacattgcctcaaaatattccctcatccaaacacac 531  Q
    |||||||||  ||||||| |||||| |||||||||||||    
T  45565435 cattacattctctcaaaacattcccccatccaaacacac 45565397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 414 - 534
Target Start/End: Original strand, 4038113 - 4038234
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| ||||||| ||| |    | |||| ||||| ||| || |||||||||||||||||||||| || ||||||||||    
T  4038113 aatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctcaaaata 4038212  T
Q  513 ttccctcatccaaacacactct 534  Q
    ||||| ||||||||||||||||    
T  4038213 ttcccccatccaaacacactct 4038234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 414 - 534
Target Start/End: Complemental strand, 15034780 - 15034659
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| ||||||||||| |    | |||| ||||| ||| || ||||||||||||||||||||||||| |||||||| |    
T  15034780 aatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaaca 15034681  T
Q  513 ttccctcatccaaacacactct 534  Q
    ||||  ||||||||||||||||    
T  15034680 ttcctccatccaaacacactct 15034659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 390 - 496
Target Start/End: Complemental strand, 5474549 - 5474437
Alignment:
Q  390 ccttagagtatgtttggatgggggaatgc-----tttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaatt 483  Q
    ||||||||| ||||||||| ||||||||      ||||||||||||||||||||| | ||||||||||||||||||||| ||| ||||| ||||| ||||    
T  5474549 ccttagagtgtgtttggataggggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacttcaaagtaattaaatt 5474450  T
Q  484 ccctcaaaacatt 496  Q
    |||||||||||||    
T  5474449 ccctcaaaacatt 5474437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 464 - 534
Target Start/End: Complemental strand, 38277485 - 38277415
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||| || ||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  38277485 cacctcaaagtagttgaattccttcaaaacattacattccctcaaaatattctctcatccaaacacactct 38277415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 394 - 462
Target Start/End: Original strand, 15245460 - 15245529
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttgaat 462  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||    
T  15245460 agagtgtgtttggatgggggaatgttttgagggaattcaactactttaaggtgaattctattgtttgaat 15245529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 392 - 492
Target Start/End: Complemental strand, 17502323 - 17502222
Alignment:
Q  392 ttagagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaa 490  Q
    ||||||| ||||| ||| |||||||| ||||||||||||||||||| || || ||||||||||| ||||||| ||||||||| || |||||||| |||||    
T  17502323 ttagagtgtgttttgattggggaatgttttgagggaattcaactactttaagttgaattctattatttgaattcacctcaaagtagttgaattctctcaa 17502224  T
Q  491 aa 492  Q
    ||    
T  17502223 aa 17502222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 391 - 459
Target Start/End: Original strand, 48953584 - 48953652
Alignment:
Q  391 cttagagtatgtttggatgggggaatgctttgagggaattcaactacttgaggtgaattctattgtttg 459  Q
    |||||||| |||||||||||||||||| ||||| ||||||||| || ||||||||||||||||||||||    
T  48953584 cttagagtgtgtttggatgggggaatgttttgaaggaattcaaatatttgaggtgaattctattgtttg 48953652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 8224843 - 8224768
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||| ||||| || || |||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  8224843 gaattcacatcaaagtatttcaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 8224768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 24273218 - 24273293
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||||||| || ||||||||||||| ||||||||||| |||||||| |||||| ||||||||||||||||    
T  24273218 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 24273293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 34756502 - 34756427
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||||||| || ||||||||||||||||||||||||| |||||||| |||||| ||||||||||| ||||    
T  34756502 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacactctct 34756427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 468 - 531
Target Start/End: Original strand, 37036956 - 37037019
Alignment:
Q  468 tcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacac 531  Q
    |||||||| |||||||||||||||||||||||||  ||||||| ||||||||||||||||||||    
T  37036956 tcaaaatatttgaattccctcaaaacattacattcactcaaaacattccctcatccaaacacac 37037019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 414 - 496
Target Start/End: Original strand, 45565432 - 45565515
Alignment:
Q  414 aatgctttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacatt 496  Q
    |||| |||||||||||||||||| || | ||||||||||||||||| ||| ||||||||| || ||||||||||||||||||||    
T  45565432 aatgttttgagggaattcaactattttaaggtgaattctattgtttaaattcacctcaaagtagttgaattccctcaaaacatt 45565515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 419 - 532
Target Start/End: Complemental strand, 28745912 - 28745799
Alignment:
Q  419 tttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccc 517  Q
    |||||||||||||||||| || ||||||||||| |    | |||| ||||| ||| |||||||||||||||||| ||||||||| |||||||||||||||    
T  28745912 tttgagggaattcaactattttgaggtgaattcaaacaatagaattcaccttaaa-taattgaattccctcaaaccattacattccctcaaaatattccc 28745814  T
Q  518 tcatccaaacacact 532  Q
     |||||||| |||||    
T  28745813 ccatccaaatacact 28745799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 6470684 - 6470759
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||||||||  | |||||||||||||||||||||||||  ||||||| |||||  ||||||||||||||||    
T  6470684 gaatccacctcaaagaatttgaattccctcaaaacattacattctctcaaaacattccgccatccaaacacactct 6470759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 26501077 - 26501152
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||| ||||| || ||||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  26501077 gaattcacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 26501152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 467 - 534
Target Start/End: Complemental strand, 31166377 - 31166310
Alignment:
Q  467 ctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||| ||| ||||| |||||||||||||||  ||||||| |||||||||||||||||||||||    
T  31166377 ctcaaaatatttgcattccatcaaaacattacattatctcaaaacattccctcatccaaacacactct 31166310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 50005154 - 50005079
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||||||||  | |||||||| ||||||||||||||||  ||||||||||||| |||||||||||||||||    
T  50005154 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaacacactct 50005079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 459 - 532
Target Start/End: Original strand, 28632584 - 28632656
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    |||| ||||||||| || |||||||| |||||||||||||||| |||| ||| |||||||||||||||||||||    
T  28632584 gaattcacctcaaagta-ttgaattctctcaaaacattacattccctccaaacattccctcatccaaacacact 28632656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 394 - 501
Target Start/End: Original strand, 5474417 - 5474525
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaa 492  Q
    ||||| |||||||||||||||||| |||||||||||| || ||| |||| |||||||| |    | |||| ||||| ||| || ||||||||||||||||    
T  5474417 agagtgtgtttggatgggggaatgttttgagggaatttaattactttgaagtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaa 5474516  T
Q  493 cattacatt 501  Q
    |||||||||    
T  5474517 cattacatt 5474525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 44410386 - 44410311
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||||||||||| |||||||| || ||||||||||||| |||||||| |||| | |||||||| |||||||    
T  44410386 gaattcacctcaaaatagttgaattcgcttaaaacattacattccctcaaaacattctcccatccaaatacactct 44410311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 47165210 - 47165285
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||| ||| || ||||||||||||||||||||||||| |||||||| ||| |  ||||||||||||||||    
T  47165210 gaattcaccttaaagtatttgaattccctcaaaacattacatttcctcaaaacatttctccatccaaacacactct 47165285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 459 - 532
Target Start/End: Complemental strand, 34003452 - 34003379
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    |||| ||||||||| || |||||| ||||||||| |||| ||||| | ||||||||| ||||||||||||||||    
T  34003452 gaattcacctcaaagtatttgaatgccctcaaaatattatattgctttaaaatattcactcatccaaacacact 34003379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 419 - 534
Target Start/End: Original strand, 27804308 - 27804424
Alignment:
Q  419 tttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccc 517  Q
    |||||||||||||||||| || ||||||||||| |    | |||| || || ||| || ||||||||| || |||||||||||| |||||||| |||||     
T  27804308 tttgagggaattcaactattttgaggtgaattcaaacaatagaattcaacttaaagtagttgaattccttctaaacattacatttcctcaaaacattcct 27804407  T
Q  518 tcatccaaacacactct 534  Q
     ||||||||||||||||    
T  27804408 ccatccaaacacactct 27804424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 394 - 496
Target Start/End: Original strand, 17502198 - 17502301
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaa 492  Q
    ||||| |||||||||| ||||||  |||||| |||||||||||| ||||||||||||| | |  | |||| || || ||| || ||||||||||||||||    
T  17502198 agagtgtgtttggatgagggaatattttgagagaattcaactactttgaggtgaattcaaataatagaattcaacttaaagtagttgaattccctcaaaa 17502297  T
Q  493 catt 496  Q
    ||||    
T  17502298 catt 17502301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 471 - 534
Target Start/End: Complemental strand, 29446813 - 29446750
Alignment:
Q  471 aaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||| ||||||||||||||||||||||||| | |||||| |||||| | | ||||||||||||    
T  29446813 aaatagttgaattccctcaaaacattacattccttcaaaacattcccccgttcaaacacactct 29446750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 392 - 458
Target Start/End: Original strand, 32128046 - 32128113
Alignment:
Q  392 ttagagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgttt 458  Q
    ||||||| ||||| |||||||||||| ||||||||||||||| ||| ||| ||||||||| |||||||    
T  32128046 ttagagtgtgtttagatgggggaatgttttgagggaattcaaatactttgtggtgaattccattgttt 32128113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 464 - 534
Target Start/End: Complemental strand, 10166569 - 10166499
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||| || ||| |||| |||| ||||||||||||||| || ||||| |||| ||||||||||||||||||    
T  10166569 cacctaaatatatttgagttccttcaaaacattacattaccacaaaacattctctcatccaaacacactct 10166499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 468 - 534
Target Start/End: Original strand, 32287940 - 32288006
Alignment:
Q  468 tcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||| || ||||||| ||||||||||||||||| ||||||||  ||||  ||||||||||||||||    
T  32287940 tcaaagtatttgaatttcctcaaaacattacattccctcaaaactttcctccatccaaacacactct 32288006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 391 - 492
Target Start/End: Original strand, 34007355 - 34007452
Alignment:
Q  391 cttagagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctca 489  Q
    |||||||| ||||||||||||| |||  ||||||||||||||||||| ||||| |||||||      |||||| || |||||| || |||||||||||||    
T  34007355 cttagagtgtgtttggatggggaaatattttgagggaattcaactactttgagttgaattc-----attgaattcaactcaaagtagttgaattccctca 34007449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 459 - 525
Target Start/End: Original strand, 37448399 - 37448465
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaa 525  Q
    |||| ||| ||||| || || ||||||||||||||||||||||  ||||||| ||||||||||||||    
T  37448399 gaattcacatcaaagtatttaaattccctcaaaacattacattctctcaaaacattccctcatccaa 37448465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 459
Target Start/End: Complemental strand, 41823215 - 41823149
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaacta-cttgaggtgaattctattgtttg 459  Q
    ||||| |||||||||||||||||| ||||| ||||||||| || |||||| ||||||| ||||||||    
T  41823215 agagtgtgtttggatgggggaatgttttgaaggaattcaaataccttgagatgaattccattgtttg 41823149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 464 - 534
Target Start/End: Original strand, 43622981 - 43623051
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||| || || ||||  |||||||||||||||| | |||||| |||||| ||||||||||||||||    
T  43622981 cacctcaaagtatttaaattttctcaaaacattacattccatcaaaacattcccccatccaaacacactct 43623051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 459
Target Start/End: Original strand, 50471768 - 50471834
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttg 459  Q
    ||||| |||||||||||||||| | ||||||||||||||| ||| || ||||||||| |||||||||    
T  50471768 agagtgtgtttggatgggggaaagttttgagggaattcaaatactttcaggtgaattttattgtttg 50471834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 459 - 516
Target Start/End: Complemental strand, 31195531 - 31195474
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattcc 516  Q
    |||| |||||||||||| || |||| ||||| ||||||||||| ||||||||||||||    
T  31195531 gaattcacctcaaaatatttaaatttcctcagaacattacattccctcaaaatattcc 31195474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 527
Target Start/End: Original strand, 37447900 - 37447968
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaac 527  Q
    |||| ||||||||  || ||||||||| ||||||||||||||| |||| ||||||||||  ||||||||    
T  37447900 gaattcacctcaaggtatttgaattccttcaaaacattacattccctccaaatattcccctatccaaac 37447968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 429
Target Start/End: Complemental strand, 30190299 - 30190260
Alignment:
Q  390 ccttagagtatgtttggatgggggaatgctttgagggaat 429  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  30190299 ccttagagtgtgtttggatgggggaatgttttgagggaat 30190260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 492
Target Start/End: Complemental strand, 34007476 - 34007382
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaa 492  Q
    ||||| ||||||||||||| |||  ||||||||||||||||||| ||||| ||||||| |     ||||| || |||||| || ||||||||||||||||    
T  34007476 agagtgtgtttggatggggaaatattttgagggaattcaactactttgagttgaattcaa-----tgaattcaactcaaagtagttgaattccctcaaaa 34007382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 49659291 - 49659217
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||||||| || || |||||||||  ||||||||||| |||||| | |||||| ||||||||||||||||    
T  49659291 gaattcacctcaaagtatttaaattccctcgtaacattacattccctcaatacattccc-catccaaacacactct 49659217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 391 - 429
Target Start/End: Complemental strand, 24273296 - 24273258
Alignment:
Q  391 cttagagtatgtttggatgggggaatgctttgagggaat 429  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  24273296 cttagagtgtgtttggatgggggaatgttttgagggaat 24273258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 459 - 525
Target Start/End: Complemental strand, 44570753 - 44570687
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaa 525  Q
    |||| ||||||||  || ||||||||| ||||||||||||||| |||||||| |||| | |||||||    
T  44570753 gaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattctcccatccaa 44570687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 446 - 492
Target Start/End: Complemental strand, 47074223 - 47074177
Alignment:
Q  446 aattctattgtttgaatccacctcaaaataattgaattccctcaaaa 492  Q
    ||||||||||||||||| ||||||||| || ||||||||| ||||||    
T  47074223 aattctattgtttgaattcacctcaaagtagttgaattccttcaaaa 47074177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 414 - 454
Target Start/End: Original strand, 29446788 - 29446828
Alignment:
Q  414 aatgctttgagggaattcaactacttgaggtgaattctatt 454  Q
    |||| |||||||||||||||||| || ||||||||||||||    
T  29446788 aatgttttgagggaattcaactatttaaggtgaattctatt 29446828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 400 - 459
Target Start/End: Original strand, 44571226 - 44571285
Alignment:
Q  400 tgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttg 459  Q
    ||||||||||||| |||| ||||||||||||||| ||| |||| |||||||| ||||||||    
T  44571226 tgtttggatgggg-aatgttttgagggaattcaaatactttgaagtgaattccattgtttg 44571285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 117; Significance: 3e-59; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 391 - 534
Target Start/End: Original strand, 46429411 - 46429555
Alignment:
Q  391 cttagagtatgtttggatgggggaatgctttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctca 489  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||    
T  46429411 cttagagtgtgtttggatgggggaatgttttgagggaattcaactactttaaggtgaattctattgtttgaatccacctcaaaataattgaattccttca 46429510  T
Q  490 aaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  46429511 aaacattacattacctcaaaatattccctcatccaaacacactct 46429555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 419 - 534
Target Start/End: Original strand, 47284269 - 47284385
Alignment:
Q  419 tttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccc 517  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  47284269 tttgagggaattcagctactttgaggtgaattctattgtttgaatcaacctcaaaataattgaattccctcaaaacattacattacctcaaaatattctc 47284368  T
Q  518 tcatccaaacacactct 534  Q
    |||||||||||||||||    
T  47284369 tcatccaaacacactct 47284385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 414 - 515
Target Start/End: Original strand, 31070444 - 31070546
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31070444 aatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaata 31070543  T
Q  513 ttc 515  Q
    |||    
T  31070544 ttc 31070546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 390 - 534
Target Start/End: Original strand, 27251908 - 27252053
Alignment:
Q  390 ccttagagtatgtttggatgggggaatgctttgagggaattcaactacttgaggt-gaattctattgtttgaatccacctcaaaataattgaattccctc 488  Q
    ||||||| | |||||||||||||||||| ||| ||||||||||||||||| | || |||||||||||||||||| ||||||||| || ||||||||||||    
T  27251908 ccttagaatgtgtttggatgggggaatgttttaagggaattcaactactttaagttgaattctattgtttgaattcacctcaaagtagttgaattccctc 27252007  T
Q  489 aaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||||||| |||||||| || ||| ||||||||||||||||    
T  27252008 aaaacattacattccctcaaaacatccccccatccaaacacactct 27252053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 394 - 534
Target Start/End: Complemental strand, 28092355 - 28092214
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaa 492  Q
    ||||| |||||  ||||||||||| |||||||||||||||||  || ||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  28092355 agagtgtgtttaaatgggggaatgttttgagggaattcaactgttttgaggtgaattctattgtttgaattcacctcaaagtaattgaattccctcaaaa 28092256  T
Q  493 cattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||| ||||| |||||||| |||||| |||||||||| |||||    
T  28092255 catcacatttcctcaaaacattcccccatccaaacatactct 28092214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 394 - 532
Target Start/End: Original strand, 39215857 - 39215995
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaa 492  Q
    ||||| ||||||||||||| |||  ||| ||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||  |||||||    
T  39215857 agagtgtgtttggatgggg-aatatttttagggaattcaattactttgaggtgaattttattgtttgaatccacctcaaaataattgaattttctcaaaa 39215955  T
Q  493 cattacattgcctcaaaatattccctcatccaaacacact 532  Q
    ||||| ||| ||||||||||||| ||||||||||||||||    
T  39215956 cattatattacctcaaaatattctctcatccaaacacact 39215995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 414 - 534
Target Start/End: Original strand, 9129382 - 9129503
Alignment:
Q  414 aatgctttgagggaattcaactacttgaggt-gaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||| ||||||||||||||| | || |||||||||||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||| |    
T  9129382 aatgttttgatggaattcaactactttaagttgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 9129481  T
Q  513 ttccctcatccaaacacactct 534  Q
    ||||||||||||||||||||||    
T  9129482 ttccctcatccaaacacactct 9129503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 414 - 534
Target Start/End: Original strand, 9137489 - 9137610
Alignment:
Q  414 aatgctttgagggaattcaactacttgaggt-gaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||| ||||||||||||||| | || |||||||||||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||| |    
T  9137489 aatgttttgatggaattcaactactttaagttgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 9137588  T
Q  513 ttccctcatccaaacacactct 534  Q
    ||||||||||||||||||||||    
T  9137589 ttccctcatccaaacacactct 9137610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 414 - 534
Target Start/End: Original strand, 44692860 - 44692981
Alignment:
Q  414 aatgctttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| |||||||||||||||| |||| | ||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||| |    
T  44692860 aatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 44692959  T
Q  513 ttccctcatccaaacacactct 534  Q
    ||||  ||||||||||||||||    
T  44692960 ttcctccatccaaacacactct 44692981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 414 - 534
Target Start/End: Complemental strand, 5415904 - 5415783
Alignment:
Q  414 aatgctttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||| ||||||||||||||| | |||||||||||||||||| |  ||||| ||| || ||||||||||||||||||||||||| ||||||||||    
T  5415904 aatgttttgatggaattcaactactttaaggtgaattctattgtttgtactcaccttaaagtagttgaattccctcaaaacattacattccctcaaaata 5415805  T
Q  513 ttccctcatccaaacacactct 534  Q
    |||||  |||||||||||||||    
T  5415804 ttcccctatccaaacacactct 5415783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 423 - 532
Target Start/End: Complemental strand, 42130804 - 42130694
Alignment:
Q  423 agggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcat 521  Q
    ||||||||||| ||||| ||||||||||||| | ||||||||||| | || ||||||||||||||||||||||||||||  ||||||||||||||| ||     
T  42130804 agggaattcaattactttgaggtgaattctactctttgaatccacttaaagataattgaattccctcaaaacattacatcacctcaaaatattcccccac 42130705  T
Q  522 ccaaacacact 532  Q
    |||||||||||    
T  42130704 ccaaacacact 42130694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 390 - 534
Target Start/End: Complemental strand, 44436408 - 44436258
Alignment:
Q  390 ccttagagtatgtttggatgggggaatgc-----tttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaatt 483  Q
    ||||||||| ||||||||||||| ||||      ||||||||||||||||||||| ||||||||||| |    | |||| ||||| |||||| |||||||    
T  44436408 ccttagagtgtgtttggatggggaaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaaatagttgaatt 44436309  T
Q  484 ccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
     ||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  44436308 tcctcaaaacattacattccctcaaaacattcccccatccaaacacactct 44436258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 394 - 496
Target Start/End: Complemental strand, 332116 - 332012
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattg-tttgaatccacctcaaaataattgaattccctcaaa 491  Q
    ||||| |||||||||||  ||||| ||||||||||||||||||| || ||||||||||||||| ||||||| ||||||||| || |||||||||||||||    
T  332116 agagtgtgtttggatggaagaatgttttgagggaattcaactactttaaggtgaattctattgttttgaattcacctcaaagtagttgaattccctcaaa 332017  T
Q  492 acatt 496  Q
    |||||    
T  332016 acatt 332012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 414 - 501
Target Start/End: Original strand, 44436296 - 44436384
Alignment:
Q  414 aatgctttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacatt 501  Q
    |||| ||||||| |||||||||| || | ||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||    
T  44436296 aatgttttgaggaaattcaactattttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacatt 44436384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 424 - 534
Target Start/End: Original strand, 46672770 - 46672875
Alignment:
Q  424 gggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatc 522  Q
    |||||||||||||||| ||||||||||| |      |||| ||||||||| || ||||||||||||||||||||||||| |||||||| |||||| ||||    
T  46672770 gggaattcaactactttgaggtgaattcaa------gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatc 46672863  T
Q  523 caaacacactct 534  Q
    ||||||||||||    
T  46672864 caaacacactct 46672875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 394 - 496
Target Start/End: Complemental strand, 25655438 - 25655335
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaactacttgaggt-gaattctattgtttgaatccacctcaaaataattgaattccctcaaaa 492  Q
    ||||| ||||||||||||| |||| ||||| ||||||||||||||| | || |||||||||| ||||||| || |||||| || ||||||||||||||||    
T  25655438 agagtgtgtttggatggggaaatgttttgacggaattcaactactttaagttgaattctattatttgaattcaactcaaagtagttgaattccctcaaaa 25655339  T
Q  493 catt 496  Q
    ||||    
T  25655338 catt 25655335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 443 - 534
Target Start/End: Complemental strand, 39110485 - 39110394
Alignment:
Q  443 gtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||||||||||||||||| || |||||| || |||||||||| ||||||||||||||  ||||||| ||| | |||||||||||||||||    
T  39110485 gtgaattctattgtttgaattcaactcaaagtagttgaattcccacaaaacattacattcgctcaaaacatttcttcatccaaacacactct 39110394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 414 - 534
Target Start/End: Complemental strand, 44692943 - 44692822
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| ||||||||||| |    | |||| ||||| ||| |  |||||||||||||||||||||| || |||||||| |    
T  44692943 aatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtggttgaattccctcaaaacattactttccctcaaaaca 44692844  T
Q  513 ttccctcatccaaacacactct 534  Q
    ||||| ||||||||||||||||    
T  44692843 ttcccccatccaaacacactct 44692822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 414 - 534
Target Start/End: Complemental strand, 9129465 - 9129344
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| ||||||||||| |    | |||| || || ||| || ||||||||| ||||||||||||||| ||||||||||    
T  9129465 aatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaagtagttgaattccatcaaaacattacattccctcaaaata 9129366  T
Q  513 ttccctcatccaaacacactct 534  Q
     || | ||||||||||||||||    
T  9129365 gtctcccatccaaacacactct 9129344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 414 - 534
Target Start/End: Complemental strand, 9137572 - 9137451
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| ||||||||||| |    | |||| || || ||| || ||||||||| ||||||||||||||| ||||||||||    
T  9137572 aatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaagtagttgaattccatcaaaacattacattccctcaaaata 9137473  T
Q  513 ttccctcatccaaacacactct 534  Q
     || | ||||||||||||||||    
T  9137472 gtctcccatccaaacacactct 9137451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 477 - 534
Target Start/End: Complemental strand, 49457400 - 49457343
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  49457400 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 49457343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 5415867 - 5415942
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||| ||| || ||||||||| |||||||||||| || ||||||||||||||| ||||||||||||||||    
T  5415867 gaattcaccttaaagtagttgaattccatcaaaacattactttccctcaaaatattcccccatccaaacacactct 5415942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 21307529 - 21307600
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 530  Q
    |||| ||||||||| || ||||||||||||||||||||||||| || ||||| |||||| ||||||||||||    
T  21307529 gaattcacctcaaagtatttgaattccctcaaaacattacattcccgcaaaacattcccccatccaaacaca 21307600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 36397986 - 36398061
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||| |||| || |||||||||||||||||| |||||| |||||||| |||||| ||||||||||||||||    
T  36397986 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacacactct 36398061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 53129840 - 53129915
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||| |||| || ||||||||||| ||||||||||||| |||| ||| |||||||||||||||||||||||    
T  53129840 gaattcaccccaaagtatttgaattcccttaaaacattacattccctcgaaacattccctcatccaaacacactct 53129915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 464 - 534
Target Start/End: Complemental strand, 47767502 - 47767432
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||  || ||||||||| ||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  47767502 cacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactct 47767432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 465 - 534
Target Start/End: Original strand, 31189400 - 31189469
Alignment:
Q  465 acctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||||| || |||||||| |||||||||||||||| |||||||| |||| ||||| ||||||||||||    
T  31189400 acctcaaagtatttgaattctctcaaaacattacattacctcaaaacattctctcattcaaacacactct 31189469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 478 - 534
Target Start/End: Complemental strand, 7302402 - 7302346
Alignment:
Q  478 tgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||||| |||||||||||||||  ||||||| |||||||||||||||||||||||    
T  7302402 tgaattccttcaaaacattacattctctcaaaacattccctcatccaaacacactct 7302346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 478 - 534
Target Start/End: Complemental strand, 46001420 - 46001364
Alignment:
Q  478 tgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||||| |||||||||||| ||||||||||||||  ||||||||||||||||    
T  46001420 tgaattccctcgaaacattacattacctcaaaatattccgccatccaaacacactct 46001364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 526
Target Start/End: Complemental strand, 31070481 - 31070415
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaa 526  Q
    |||| ||||||||| || ||||||||||||||||||||||||| |||||||| |||||| ||||||||    
T  31070481 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccc-catccaaa 31070415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 37321625 - 37321550
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||| ||| || ||||||| |||||||||||||| || ||||||||||||||| |||||||| |||||||    
T  37321625 gaattcaccttaaagtagttgaatttcctcaaaacattacttttcctcaaaatattcccccatccaaatacactct 37321550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 391 - 496
Target Start/End: Original strand, 25655312 - 25655418
Alignment:
Q  391 cttagagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctca 489  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||| ||||| ||||||| | |  | |||| || || ||| || ||||||||| |||    
T  25655312 cttagagtgtgtttggatggggaaatgttttgagggaattcaactactttgagttgaattcaaataatagaattcaacttaaagtagttgaattccgtca 25655411  T
Q  490 aaacatt 496  Q
    |||||||    
T  25655412 aaacatt 25655418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 464 - 534
Target Start/End: Complemental strand, 37054464 - 37054394
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||  || ||||||||| ||||||||||||||| ||| |||| |||||| ||||||||||||||||    
T  37054464 cacctcaaggtatttgaattccttcaaaacattacattcccttaaaacattcccccatccaaacacactct 37054394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 480 - 534
Target Start/End: Original strand, 42005971 - 42006025
Alignment:
Q  480 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||| ||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  42005971 aattccttcaaaacattacattccctcaaaacattcccccatccaaacacactct 42006025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 464 - 534
Target Start/End: Original strand, 53470431 - 53470501
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||| || |||||||||||||||||| || ||| |||||||| ||| |||||||||||||||||||    
T  53470431 caccccaaagtatttgaattccctcaaaacaatagattccctcaaaacatttcctcatccaaacacactct 53470501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 400 - 439
Target Start/End: Original strand, 27485478 - 27485517
Alignment:
Q  400 tgtttggatgggggaatgctttgagggaattcaactactt 439  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  27485478 tgtttggatgggggaatgttttgagggaattcaactactt 27485517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 34088646 - 34088571
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||| |||| || |||||||||||||||||| |||||| |||||||| ||| |  ||||||||||||||||    
T  34088646 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttctccatccaaacacactct 34088571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 459
Target Start/End: Original strand, 2104752 - 2104818
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttg 459  Q
    ||||| ||||||||| |||||||| || |||||||||||| ||| |||| |||||||||||||||||    
T  2104752 agagtgtgtttggataggggaatgtttcgagggaattcaaatactttgatgtgaattctattgtttg 2104818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 480 - 530
Target Start/End: Original strand, 35279920 - 35279970
Alignment:
Q  480 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 530  Q
    ||||| |||||||||||||||| |||||||| |||||| ||||||||||||    
T  35279920 aattcactcaaaacattacattccctcaaaacattcccccatccaaacaca 35279970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 477 - 534
Target Start/End: Complemental strand, 46635914 - 46635857
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||| |||||||||||||||||  ||||||| |||  ||||||||||||||||||    
T  46635914 ttgaatttcctcaaaacattacattagctcaaaacattttctcatccaaacacactct 46635857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 47284261 - 47284188
Alignment:
Q  390 ccttagagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttgaat 462  Q
    ||||||||| |||||||||| ||||||  ||||||||||||||| ||| ||||  ||||||| |||||||||||    
T  47284261 ccttagagtgtgtttggatgagggaatattttgagggaattcaaatactttgatatgaattccattgtttgaat 47284188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 478 - 534
Target Start/End: Original strand, 671635 - 671691
Alignment:
Q  478 tgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||||||||||| |||||| |||||||| ||||||  ||||||| |||||||    
T  671635 tgaattccctcaaaacaatacattccctcaaaacattcccctatccaaaaacactct 671691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 395 - 462
Target Start/End: Complemental strand, 38506929 - 38506861
Alignment:
Q  395 gagtatgtttggatgggggaatgctttgagggaattcaact-acttgaggtgaattctattgtttgaat 462  Q
    |||| ||||||||| | |||||| ||||||||||||||| | | ||||||||||||| |||||||||||    
T  38506929 gagtgtgtttggatagaggaatgttttgagggaattcaaataatttgaggtgaattccattgtttgaat 38506861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 389 - 429
Target Start/End: Original strand, 47767427 - 47767467
Alignment:
Q  389 gccttagagtatgtttggatgggggaatgctttgagggaat 429  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  47767427 gccttagagtgtgtttggatgggggaatgttttgagggaat 47767467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 392 - 450
Target Start/End: Original strand, 331991 - 332049
Alignment:
Q  392 ttagagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattc 450  Q
    ||||||| ||||||||||| | |||| ||||||||||||||||||| |||||||||||||    
T  331991 ttagagtgtgtttggatggag-aatgttttgagggaattcaactactttgaggtgaattc 332049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 526
Target Start/End: Complemental strand, 19475891 - 19475824
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaa 526  Q
    |||| ||||||||| || ||||||| ||||| ||||||||||| |||||||| |||||  ||||||||    
T  19475891 gaattcacctcaaagtatttgaattacctcataacattacattccctcaaaacattcctccatccaaa 19475824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 471 - 534
Target Start/End: Complemental strand, 21730965 - 21730902
Alignment:
Q  471 aaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||| ||||||||| ||||||||||||||  ||| |  | |||||||||||||||||||||||    
T  21730965 aaatatttgaattccttcaaaacattacataaccttaggacattccctcatccaaacacactct 21730902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 503 - 534
Target Start/End: Original strand, 47284226 - 47284257
Alignment:
Q  503 cctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||||||||||||||||||||||||||    
T  47284226 cctcaaaatattccctcatccaaacacactct 47284257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 48947680 - 48947605
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||| |||| || |||||||| ||||||||| |||||| |||||||| ||||   ||||||||||||||||    
T  48947680 gaattcaccccaaagtatttgaattctctcaaaacaatacattccctcaaaacattcttccatccaaacacactct 48947605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 391 - 425
Target Start/End: Original strand, 28092211 - 28092245
Alignment:
Q  391 cttagagtatgtttggatgggggaatgctttgagg 425  Q
    ||||||||||||||||||||||||||| |||||||    
T  28092211 cttagagtatgtttggatgggggaatgttttgagg 28092245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 391 - 429
Target Start/End: Complemental strand, 36398064 - 36398026
Alignment:
Q  391 cttagagtatgtttggatgggggaatgctttgagggaat 429  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  36398064 cttagagtgtgtttggatgggggaatgttttgagggaat 36398026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 459
Target Start/End: Complemental strand, 54761618 - 54761552
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttg 459  Q
    ||||| ||||||||||| |||||| ||||||||||||||| ||| |||| || ||||| ||||||||    
T  54761618 agagtgtgtttggatggaggaatgttttgagggaattcaaatactttgatgtaaattccattgtttg 54761552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 530
Target Start/End: Original strand, 1146960 - 1147013
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 530  Q
    |||||||  ||||||| ||||||||  |||||||||||||||||| ||||||||    
T  1146960 ttgaattttctcaaaaaattacattagctcaaaatattccctcattcaaacaca 1147013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 516
Target Start/End: Complemental strand, 30766628 - 30766571
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattcc 516  Q
    |||| ||||||||  || ||||||||| ||||||||||||||| |||||||| |||||    
T  30766628 gaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcc 30766571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 429
Target Start/End: Complemental strand, 46672877 - 46672840
Alignment:
Q  392 ttagagtatgtttggatgggggaatgctttgagggaat 429  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  46672877 ttagagtgtgtttggatgggggaatgttttgagggaat 46672840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 465 - 532
Target Start/End: Original strand, 34396510 - 34396578
Alignment:
Q  465 acctcaaaataattgaattccctcaaaacattacattgcctcaaaa-tattccctcatccaaacacact 532  Q
    |||||||| || |||||||||||   || |||||||| |||||||| |||| |||||||||||||||||    
T  34396510 acctcaaagtatttgaattcccttgtaatattacattccctcaaaaatattgcctcatccaaacacact 34396578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 114; Significance: 2e-57; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 392 - 532
Target Start/End: Complemental strand, 26251052 - 26250911
Alignment:
Q  392 ttagagtatgtttggatgggggaatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaa 490  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  26251052 ttagagtgtgtttggatgggggaatgttttgagggaattcaactactttgaggtgaattctattatttgaatccacctcaaaataattgaatttcctcaa 26250953  T
Q  491 aacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  26250952 aacattacattacctcaaaatattccctcatccaaacacact 26250911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 414 - 534
Target Start/End: Complemental strand, 15660304 - 15660183
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  15660304 aatgttttgagggaattcaactactttgagctgaattctattgtttgaatccatctcaaaataattgaattccctcaaaacattacattacctcaaaata 15660205  T
Q  513 ttccctcatccaaacacactct 534  Q
    |||||  |||||||||||||||    
T  15660204 ttcccctatccaaacacactct 15660183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 414 - 532
Target Start/End: Complemental strand, 10128095 - 10127976
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||    
T  10128095 aatgttttgagggaattcaactactttgagatgaattctattgtttgaatccacctcaaaataattgaattccttcaaaacattacattacttcaaaata 10127996  T
Q  513 ttccctcatccaaacacact 532  Q
    ||||| ||||||||||||||    
T  10127995 ttcccccatccaaacacact 10127976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 419 - 532
Target Start/End: Original strand, 42844586 - 42844700
Alignment:
Q  419 tttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccc 517  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||| ||    
T  42844586 tttgaaggaattcaactactttgaggtgaattctattgtttgaatccacttcaaaataattgatttccctcaaaacattacattacctcaaaatatttcc 42844685  T
Q  518 tcatccaaacacact 532  Q
     ||||||||||||||    
T  42844686 ccatccaaacacact 42844700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 410 - 534
Target Start/End: Complemental strand, 11041092 - 11040968
Alignment:
Q  410 ggggaatgctttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaa 508  Q
    |||||||| ||||||||||||||||||||| | |||||||||||||||||| || ||||||||| || |||||||| |||||||||||||||| ||||||    
T  11041092 ggggaatgttttgagggaattcaactactttatggtgaattctattgtttggattcacctcaaagtagttgaattctctcaaaacattacattccctcaa 11040993  T
Q  509 aatattccctcatccaaacacactct 534  Q
    ||||||||| ||||||||||||||||    
T  11040992 aatattccc-catccaaacacactct 11040968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 419 - 534
Target Start/End: Original strand, 41498533 - 41498649
Alignment:
Q  419 tttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccc 517  Q
    |||||||||||||||| |||| | ||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||     
T  41498533 tttgagggaattcaaccactttaaggtgaattctattgtttaaattcacctcaaaataattgaattccttcaaaacattacattccctcaaaatattcct 41498632  T
Q  518 tcatccaaacacactct 534  Q
     ||||||||||||||||    
T  41498633 ccatccaaacacactct 41498649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 414 - 534
Target Start/End: Original strand, 857277 - 857398
Alignment:
Q  414 aatgctttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||||| || |||||| || ||||||||||||||||||||||||| |||||||| |    
T  857277 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaaca 857376  T
Q  513 ttccctcatccaaacacactct 534  Q
    || || ||||||||||||||||    
T  857377 tttccccatccaaacacactct 857398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 445 - 534
Target Start/End: Original strand, 49111382 - 49111471
Alignment:
Q  445 gaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  49111382 gaattctattgtttgaattcacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 49111471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 422 - 534
Target Start/End: Original strand, 28845917 - 28846030
Alignment:
Q  422 gagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctca 520  Q
    |||||||||||||||||| | ||||||||||||||||||||| || |||||| || ||||||||||||||||||||| ||| |||||||| ||| || ||    
T  28845917 gagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattatattccctcaaaacatttcccca 28846016  T
Q  521 tccaaacacactct 534  Q
    ||||||||||||||    
T  28846017 tccaaacacactct 28846030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 414 - 534
Target Start/End: Complemental strand, 1107173 - 1107051
Alignment:
Q  414 aatgctttgagggaattcaactact-tgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcc-tcaaaat 511  Q
    |||| |||||||||||||||||||| | |||||||||||||||||||||| || |||||| || ||||||||| ||||||||||||||| || | ||||     
T  1107173 aatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcatctcaaagtagttgaattccttcaaaacattacattcccttaaaaaa 1107074  T
Q  512 attccctcatccaaacacactct 534  Q
    ||| |||||||||||||||||||    
T  1107073 atttcctcatccaaacacactct 1107051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 414 - 534
Target Start/End: Original strand, 7352850 - 7352971
Alignment:
Q  414 aatgctttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||| |||||||||||| || | ||||||||||||||||||||| ||  ||||| || ||||||||||||||||||||||||| |||||||| |    
T  7352850 aatgttttgatggaattcaactattttaaggtgaattctattgtttgaattcaattcaaagtagttgaattccctcaaaacattacattccctcaaaaca 7352949  T
Q  513 ttccctcatccaaacacactct 534  Q
    || || ||||||||||||||||    
T  7352950 tttccccatccaaacacactct 7352971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 466 - 534
Target Start/End: Complemental strand, 4896716 - 4896648
Alignment:
Q  466 cctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  4896716 cctcaaaataattgaattccctcaaaacattacattacctcaaaatattcccccatccaaacacactct 4896648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 394 - 534
Target Start/End: Complemental strand, 14982420 - 14982280
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaa 492  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||| ||||||||||| |   |   ||| ||||| ||| || || |||||||||||||    
T  14982420 agagtgtgtttggatgggggaatcttttgagggaattcaactactttgaggtgaattcaaaaataa-aattcaccttaaagtagttaaattccctcaaaa 14982322  T
Q  493 cattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||| |||||||| |||||  ||||||||||||||||    
T  14982321 cattacattccctcaaaacattcctccatccaaacacactct 14982280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 467 - 534
Target Start/End: Original strand, 15660275 - 15660342
Alignment:
Q  467 ctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||| || ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  15660275 ctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 15660342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 459 - 532
Target Start/End: Original strand, 4896716 - 4896789
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    |||| ||||||||| || ||||||||||||||||||||||||| |||||||||||| || ||||||||||||||    
T  4896716 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 4896789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 2125932 - 2125857
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||| |||| || |||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||    
T  2125932 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaatattcccccatccaaacacactct 2125857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 414 - 532
Target Start/End: Complemental strand, 7352933 - 7352814
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| ||  ||||||| |    | |||| ||||| |||||| ||||||||| ||||||||||||||| |||||||| |    
T  7352933 aatgttttgagggaattcaactactttgaattgaattcaaacaatagaattcaccttaaaatagttgaattccatcaaaacattacattccctcaaaaca 7352834  T
Q  513 ttccctcatccaaacacact 532  Q
    ||||| ||||||||||||||    
T  7352833 ttcccccatccaaacacact 7352814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 465 - 532
Target Start/End: Complemental strand, 31742845 - 31742778
Alignment:
Q  465 acctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    ||||||||||||||||||||||||||||||||||| | ||| ||||||||||  ||||||||||||||    
T  31742845 acctcaaaataattgaattccctcaaaacattacactaccttaaaatattcctccatccaaacacact 31742778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 464 - 534
Target Start/End: Complemental strand, 1112675 - 1112605
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||| || |||||||||||| |||||||||||| |||||||| |||||| ||||||||||||||||    
T  1112675 cacctcaaagtagttgaattccctcgaaacattacatttcctcaaaacattcccccatccaaacacactct 1112605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 464 - 534
Target Start/End: Complemental strand, 31473919 - 31473849
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||| || ||||||||||||| ||||||||||| |||||||| |||||| ||||||||||||||||    
T  31473919 cacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 31473849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 446 - 492
Target Start/End: Original strand, 46724195 - 46724241
Alignment:
Q  446 aattctattgtttgaatccacctcaaaataattgaattccctcaaaa 492  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  46724195 aattctattgtttgaatccacctcaaaataattgaattccctcaaaa 46724241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 464 - 531
Target Start/End: Complemental strand, 10633102 - 10633035
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacac 531  Q
    ||||||||| || ||||||||||||| ||||||||||| |||||||| |||||| |||||||||||||    
T  10633102 cacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacac 10633035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 36455982 - 36455907
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||| ||| || ||||||||||||||||||||| ||| |||||||| |||||| ||||||||||||||||    
T  36455982 gaattcaccttaaagtagttgaattccctcaaaacattagattccctcaaaacattcccccatccaaacacactct 36455907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 468 - 534
Target Start/End: Complemental strand, 5715810 - 5715744
Alignment:
Q  468 tcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||| || ||||||| |||||||||||||||||  ||||||| |||||||||||||||||||||||    
T  5715810 tcaaagtatttgaattacctcaaaacattacattatctcaaaacattccctcatccaaacacactct 5715744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 390 - 459
Target Start/End: Original strand, 42775619 - 42775689
Alignment:
Q  390 ccttagagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttg 459  Q
    ||||| ||| |||||||||||||||||| ||||||||||||||| ||| ||||||||||||| ||||||||    
T  42775619 ccttaaagtgtgtttggatgggggaatgttttgagggaattcaaatactttgaggtgaattccattgtttg 42775689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 477 - 534
Target Start/End: Original strand, 1107154 - 1107211
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||    
T  1107154 ttgaattccctcaaaacattatattccctcaaaatattcccccatccaaatacactct 1107211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 477 - 533
Target Start/End: Complemental strand, 4441394 - 4441338
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 533  Q
    ||||||||||||||||||||||||| |||||||| |||||  |||||||||||||||    
T  4441394 ttgaattccctcaaaacattacattccctcaaaacattccaccatccaaacacactc 4441338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 414 - 529
Target Start/End: Complemental strand, 28845992 - 28845876
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| ||| ||||||| |    | |||| ||||| ||| || |||||||||||| |||||||||||| |||||||| |    
T  28845992 aatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcgaaacattacattccctcaaaaca 28845893  T
Q  513 ttccctcatccaaacac 529  Q
    ||||  |||||||||||    
T  28845892 ttcctccatccaaacac 28845876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 467 - 534
Target Start/End: Original strand, 10128066 - 10128133
Alignment:
Q  467 ctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||| || |||||||||||||||||||||||||  ||||||| |||||| |||||||| |||||||    
T  10128066 ctcaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaatacactct 10128133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 414 - 472
Target Start/End: Original strand, 36455945 - 36456004
Alignment:
Q  414 aatgctttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaa 472  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||||| |||||||||    
T  36455945 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaa 36456004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 464 - 526
Target Start/End: Complemental strand, 1539711 - 1539649
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaa 526  Q
    ||||||||| || ||||||||||||||||||||||||| |||||||| |||||  ||||||||    
T  1539711 cacctcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaa 1539649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 443 - 496
Target Start/End: Original strand, 4441396 - 4441449
Alignment:
Q  443 gtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacatt 496  Q
    |||||||||||||||||||| ||||||||| || ||||||| ||||||||||||    
T  4441396 gtgaattctattgtttgaattcacctcaaagtagttgaatttcctcaaaacatt 4441449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 534
Target Start/End: Original strand, 11348339 - 11348396
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||||||||||||||||||| ||| |||| |||||| |||||||| |||||||    
T  11348339 ttgaattccctcaaaacattacattcccttaaaacattcccccatccaaatacactct 11348396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 391 - 459
Target Start/End: Complemental strand, 53760848 - 53760779
Alignment:
Q  391 cttagagtatgtttggatgggggaatgctttgagggaattcaacta-cttgaggtgaattctattgtttg 459  Q
    |||||||| |||||| ||||||||||| ||||||||||||||| ||  |||| |||||||||||||||||    
T  53760848 cttagagtgtgtttgaatgggggaatgttttgagggaattcaaatattttgatgtgaattctattgtttg 53760779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 395 - 450
Target Start/End: Complemental strand, 4441468 - 4441412
Alignment:
Q  395 gagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattc 450  Q
    |||| |||||||||||||||||| ||||||| ||||||||||| |||||||||||||    
T  4441468 gagtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattc 4441412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 1112706 - 1112781
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||||||| || |||||||||||| ||||||||||||  ||||||| || ||| |||||||||| |||||    
T  1112706 gaattcacctcaaagtagttgaattccctcgaaacattacatttgctcaaaacatccccccatccaaacaaactct 1112781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 492
Target Start/End: Original strand, 14982318 - 14982396
Alignment:
Q  414 aatgctttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaa 492  Q
    |||| |||||||||||| |||||||| | |||||||| |||| ||||||| ||||||||| || ||||||||||||||||    
T  14982318 aatgttttgagggaatttaactactttaaggtgaattttatt-tttgaattcacctcaaagtagttgaattccctcaaaa 14982396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 36456010 - 36456085
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||| ||| || ||||||| |||||||| |||||||| |||||||| |||||  ||||||||||||||||    
T  36456010 gaattcaccttaaagtagttgaatttcctcaaaatattacattccctcaaaacattcctccatccaaacacactct 36456085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 414 - 507
Target Start/End: Complemental strand, 857360 - 857266
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctca 507  Q
    |||| ||||||||||||||||||||| ||| ||||||| |    | |||| ||||| ||| || ||||||||||||||||||||||||| |||||    
T  857360 aatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctca 857266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 480 - 534
Target Start/End: Complemental strand, 16516225 - 16516171
Alignment:
Q  480 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||| ||||||||||||||| | |||||| |||||| ||||||||||||||||    
T  16516225 aattccttcaaaacattacattccgtcaaaacattcccccatccaaacacactct 16516171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 392 - 472
Target Start/End: Complemental strand, 12914141 - 12914060
Alignment:
Q  392 ttagagtatgtttggatgggggaatgctttgagggaattcaacta-cttgaggtgaattctattgtttgaatccacctcaaa 472  Q
    ||||||| |||||||||| |  |||| ||||||||||||||||||  || || |||||| |||||||||||| |||||||||    
T  12914141 ttagagtgtgtttggatgagaaaatgttttgagggaattcaactattttaagatgaattttattgtttgaattcacctcaaa 12914060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 485 - 534
Target Start/End: Original strand, 31742874 - 31742923
Alignment:
Q  485 cctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  31742874 cctcaaaacattacattccctcaaaacattcctccatccaaacacactct 31742923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 532
Target Start/End: Original strand, 19461743 - 19461807
Alignment:
Q  468 tcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    ||||| || |||||||| |||||||||||||||| | |||||||||| || |||||||| |||||    
T  19461743 tcaaattatttgaattcgctcaaaacattacattacttcaaaatatttccccatccaaaaacact 19461807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 451 - 534
Target Start/End: Original strand, 467879 - 467960
Alignment:
Q  451 tattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||||||||| ||| ||||| |  ||||||||| ||||||||||||||| | |||||| |||| | ||||||||||||||||    
T  467879 tattgtttgaattcacttcaaagtggttgaattcc-tcaaaacattacattccatcaaaacattctc-catccaaacacactct 467960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 508
Target Start/End: Original strand, 21012499 - 21012542
Alignment:
Q  465 acctcaaaataattgaattccctcaaaacattacattgcctcaa 508  Q
    ||||||||||| ||||||||||||| ||||||||||| ||||||    
T  21012499 acctcaaaatatttgaattccctcataacattacatttcctcaa 21012542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 35470197 - 35470122
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||| |||| || |||||||||||||||||| |||||| |||||||| ||| |  |||| |||||||||||    
T  35470197 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttcaccatctaaacacactct 35470122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 459
Target Start/End: Complemental strand, 46243144 - 46243086
Alignment:
Q  400 tgtttggatgggggaatgctttgagggaattcaactacttgaggtgaattctattgtttg 459  Q
    |||||||||||||||||| |||||| |||||||| || ||||||| ||||| ||||||||    
T  46243144 tgtttggatgggggaatgttttgagagaattcaaatatttgaggt-aattccattgtttg 46243086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 402 - 459
Target Start/End: Original strand, 17727091 - 17727149
Alignment:
Q  402 tttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttg 459  Q
    |||||||||||||||| |||| |||||||||| ||| ||||||||||||  ||||||||    
T  17727091 tttggatgggggaatgttttgtgggaattcaaatactttgaggtgaatttcattgtttg 17727149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 446 - 488
Target Start/End: Complemental strand, 32725003 - 32724961
Alignment:
Q  446 aattctattgtttgaatccacctcaaaataattgaattccctc 488  Q
    ||||||||||||||||  ||||||||| |||||||||||||||    
T  32725003 aattctattgtttgaactcacctcaaagtaattgaattccctc 32724961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 534
Target Start/End: Original strand, 55266864 - 55266934
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||| ||| || |||||||||||||||| |||| ||| |||||||| ||||   ||||||||||||||||    
T  55266864 caccttaaagtagttgaattccctcaaaatattatatttcctcaaaacattcatccatccaaacacactct 55266934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 429
Target Start/End: Original strand, 31473847 - 31473884
Alignment:
Q  392 ttagagtatgtttggatgggggaatgctttgagggaat 429  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  31473847 ttagagtgtgtttggatgggggaatgttttgagggaat 31473884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 429
Target Start/End: Original strand, 36455905 - 36455942
Alignment:
Q  392 ttagagtatgtttggatgggggaatgctttgagggaat 429  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  36455905 ttagagtgtgtttggatgggggaatgttttgagggaat 36455942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 532
Target Start/End: Original strand, 42542979 - 42543024
Alignment:
Q  487 tcaaaacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    ||||||||||||||| |||||||| |||||  ||||||||||||||    
T  42542979 tcaaaacattacattccctcaaaacattccaccatccaaacacact 42543024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 429
Target Start/End: Complemental strand, 49111473 - 49111436
Alignment:
Q  392 ttagagtatgtttggatgggggaatgctttgagggaat 429  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  49111473 ttagagtgtgtttggatgggggaatgttttgagggaat 49111436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 459 - 507
Target Start/End: Complemental strand, 29091212 - 29091164
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctca 507  Q
    |||| ||| ||||| || ||||||||||||||||||||||||| |||||    
T  29091212 gaattcacatcaaagtatttgaattccctcaaaacattacattccctca 29091164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 392 - 459
Target Start/End: Original strand, 56339149 - 56339217
Alignment:
Q  392 ttagagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttg 459  Q
    ||||||| ||||||||||  |||||| ||||||||||||||| ||| |||| |||||||  ||||||||    
T  56339149 ttagagtgtgtttggatgatggaatgttttgagggaattcaaatactttgatgtgaatttcattgtttg 56339217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 6e-48; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 390 - 534
Target Start/End: Complemental strand, 14537344 - 14537199
Alignment:
Q  390 ccttagagtatgtttggatgggggaatgctttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctc 488  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||| ||||||||| || ||||||| ||||    
T  14537344 ccttagagtgtgtttggatgggggaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattacctc 14537245  T
Q  489 aaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||||||| |||||||| |||||| ||||||||||||||||    
T  14537244 aaaacattacattccctcaaaacattcccccatccaaacacactct 14537199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 414 - 532
Target Start/End: Complemental strand, 41461636 - 41461517
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  41461636 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattacctcaaaata 41461537  T
Q  513 ttccctcatccaaacacact 532  Q
    || || ||||||||||||||    
T  41461536 tttccccatccaaacacact 41461517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 414 - 534
Target Start/End: Complemental strand, 14365820 - 14365700
Alignment:
Q  414 aatgctttgagggaattcaactacttgaggtgaattctattgttt-gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| |||||||||||||||||||||  ||||||||||||||||| |||| ||||||||| || ||||||||||||||||||||||||| |||||||| |    
T  14365820 aatgttttgagggaattcaactacttt-ggtgaattctattgttttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 14365722  T
Q  513 ttccctcatccaaacacactct 534  Q
    ||||| ||||||||||||||||    
T  14365721 ttcccccatccaaacacactct 14365700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 390 - 496
Target Start/End: Complemental strand, 11824825 - 11824718
Alignment:
Q  390 ccttagagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctc 488  Q
    ||||| ||| |||||||||||||||||| ||||||||||||||||||| || ||||||||| |||||||||||| || |||||| || ||||||||||||    
T  11824825 ccttaaagtgtgtttggatgggggaatgttttgagggaattcaactactttaaggtgaattatattgtttgaattcatctcaaagtagttgaattccctc 11824726  T
Q  489 aaaacatt 496  Q
    ||||||||    
T  11824725 aaaacatt 11824718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 414 - 492
Target Start/End: Original strand, 27033528 - 27033607
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaa 492  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27033528 aatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaagaattgaattccctcaaaa 27033607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 441 - 534
Target Start/End: Complemental strand, 11716501 - 11716408
Alignment:
Q  441 aggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||| ||||   ||||||||||||||||    
T  11716501 aggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcttccatccaaacacactct 11716408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 449 - 532
Target Start/End: Original strand, 44256181 - 44256263
Alignment:
Q  449 tctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  44256181 tctattgtttgaattcacctcaaaataatcgaattccctcaaaacattacattacctc-aaatattcccccatccaaacacact 44256263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 400 - 496
Target Start/End: Original strand, 3345769 - 3345867
Alignment:
Q  400 tgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttgaatccacctcaaaata-attgaattccctcaaaacatt 496  Q
    |||||||||||||||||| ||||||||||||||||||| || |||| ||||||||||||||||| ||||||||| ||  ||||||||||||||||||||    
T  3345769 tgtttggatgggggaatgttttgagggaattcaactactttaaggtaaattctattgtttgaattcacctcaaagtacgttgaattccctcaaaacatt 3345867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 414 - 534
Target Start/End: Complemental strand, 784914 - 784793
Alignment:
Q  414 aatgctttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||||| || |||||| || || |||||| ||||||||||||||| |||||||| |    
T  784914 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttaaattccttcaaaacattacattccctcaaaaca 784815  T
Q  513 ttccctcatccaaacacactct 534  Q
    ||    ||||||||||||||||    
T  784814 tttttccatccaaacacactct 784793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 467 - 534
Target Start/End: Complemental strand, 17180364 - 17180297
Alignment:
Q  467 ctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  17180364 ctcaaaatagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 17180297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 41461599 - 41461674
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||||||||||| ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  41461599 gaattcacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 41461674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 459 - 532
Target Start/End: Original strand, 11532251 - 11532324
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    |||| ||||||||| || ||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  11532251 gaattcacctcaaagtatttgaattccctcaaaacattacattccctccaaatattcccccatccaaacacact 11532324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 459 - 532
Target Start/End: Complemental strand, 11793970 - 11793897
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    |||| ||||||||| || ||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||    
T  11793970 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaatattcccccatccaaacacact 11793897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 784877 - 784952
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||| ||| || ||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||    
T  784877 gaattcaccttaaagtagttgaattccctcaaaacattacattccatcaaaatattcccccatccaaacacactct 784952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 27033565 - 27033490
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||||||| || |||||||||||||||||||||||||  ||||||| |||||| ||||||||||||||||    
T  27033565 gaattcacctcaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacactct 27033490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 394 - 530
Target Start/End: Complemental strand, 11684731 - 11684603
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaa 492  Q
    ||||| ||||||||||| |||||| ||||||||||||||||||||| ||||||||||| |    | |||| |||||         |||||||||||||||    
T  11684731 agagtgtgtttggatggaggaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcacct---------tgaattccctcaaaa 11684641  T
Q  493 cattacattgcctcaaaatattccctcatccaaacaca 530  Q
    ||||||||| |||||||| |||||| ||||||||||||    
T  11684640 cattacattccctcaaaacattcccccatccaaacaca 11684603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 414 - 496
Target Start/End: Original strand, 10244215 - 10244298
Alignment:
Q  414 aatgctttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacatt 496  Q
    |||| ||||||||||||||||||||| | |||||||| |||||||||||  ||||||||| || ||||||||||| ||||||||    
T  10244215 aatgttttgagggaattcaactacttcaaggtgaattttattgtttgaactcacctcaaagtagttgaattcccttaaaacatt 10244298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 10480194 - 10480119
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||||||| || ||||||||||||  ||||||||||| |||||||| |||||| ||||||||||||||||    
T  10480194 gaattcacctcaaagtatttgaattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 10480119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 441 - 496
Target Start/End: Original strand, 11684656 - 11684711
Alignment:
Q  441 aggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacatt 496  Q
    |||||||||||||||||||||| ||||||||| || ||||||||||||||||||||    
T  11684656 aggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 11684711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 17905729 - 17905654
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||||||||||| ||||||||| | |||||||||||||  ||||||| |||||||||||| ||||||||||    
T  17905729 gaattcacctcaaaatatttgaattcctttaaaacattacattctctcaaaacattccctcatcctaacacactct 17905654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 390 - 459
Target Start/End: Complemental strand, 8736500 - 8736430
Alignment:
Q  390 ccttagagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttg 459  Q
    ||||||||| |||||||||| ||||||| ||||||||||||||| ||| ||||||||||||| ||||||||    
T  8736500 ccttagagtgtgtttggatgagggaatgttttgagggaattcaaatactttgaggtgaattccattgtttg 8736430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 402 - 534
Target Start/End: Complemental strand, 10244310 - 10244177
Alignment:
Q  402 tttggatgggggaatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacat 500  Q
    |||| ||||||||||| ||| ||||||||||||||||| ||||||| ||| |    |  ||| |||||  || || |||||||||||||||||||||| |    
T  10244310 tttgaatgggggaatgttttaagggaattcaactactttgaggtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaaaacattactt 10244211  T
Q  501 tgcctcaaaatattccctcatccaaacacactct 534  Q
    | ||||| ||||||| | ||||||||||||||||    
T  10244210 tccctcagaatattctcccatccaaacacactct 10244177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 477 - 534
Target Start/End: Original strand, 14365801 - 14365858
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  14365801 ttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 14365858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 769111 - 769036
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||| |||| || ||||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  769111 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 769036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 1583807 - 1583882
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||| |||| || ||||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  1583807 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 1583882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 13017854 - 13017779
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||||||| || ||||||||||| |||| |||||||| |||||||| ||| || ||||||||||||||||    
T  13017854 gaattcacctcaaagtatttgaattcccttaaaatattacattccctcaaaacatttccacatccaaacacactct 13017779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 33189255 - 33189330
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||| |||| || ||||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  33189255 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 33189330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 35047677 - 35047752
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||| |||| || ||||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  35047677 gaattcaccccaaagtatttgaattcccttaaaacaatacatttcctcaaaacattcccccatccaaacacactct 35047752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 464 - 534
Target Start/End: Complemental strand, 11141375 - 11141305
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||| || ||||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  11141375 caccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 11141305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 414 - 534
Target Start/End: Complemental strand, 14954388 - 14954266
Alignment:
Q  414 aatgctttgagggaattcaactacttga-ggtgaattctattgttt-gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaat 511  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||| ||||  || | ||| || |||||||| || |||| ||||||||  |||||||     
T  14954388 aatgttttgagggaattcaactactttaaggtgaattctattgttttgaatttactttaaagtagttgaattctcttaaaagattacattcactcaaaac 14954289  T
Q  512 attccctcatccaaacacactct 534  Q
    |||||   |||||||||||||||    
T  14954288 attcctctatccaaacacactct 14954266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 480 - 534
Target Start/End: Original strand, 45094490 - 45094544
Alignment:
Q  480 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||||||||||||||| ||| |||||||| |||||||||| ||||||||||||    
T  45094490 aattccctcaaaacattatattccctcaaaacattccctcattcaaacacactct 45094544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 526
Target Start/End: Original strand, 11716501 - 11716550
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaa 526  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||    
T  11716501 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaa 11716550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 391 - 462
Target Start/End: Original strand, 21504465 - 21504537
Alignment:
Q  391 cttagagtatgtttggatgggggaatgctttgagggaattcaacta-cttgaggtgaattctattgtttgaat 462  Q
    |||||||| ||||||||| |||||||| ||||||||||||||| ||  ||||| ||||||| |||||||||||    
T  21504465 cttagagtgtgtttggatcggggaatgttttgagggaattcaaatattttgagatgaattccattgtttgaat 21504537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 400 - 458
Target Start/End: Original strand, 11607245 - 11607304
Alignment:
Q  400 tgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgttt 458  Q
    ||||||||||||| |||| ||||||||||||||| ||| ||||||||||||| |||||||    
T  11607245 tgtttggatggggtaatgttttgagggaattcaaatactttgaggtgaattccattgttt 11607304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 531
Target Start/End: Complemental strand, 28740662 - 28740599
Alignment:
Q  468 tcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacac 531  Q
    ||||| || ||||||||||||||||||||||||| |||||||| ||| || ||| |||||||||    
T  28740662 tcaaagtatttgaattccctcaaaacattacattccctcaaaacatttccccattcaaacacac 28740599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 464 - 526
Target Start/End: Complemental strand, 30698351 - 30698289
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaa 526  Q
    ||||||||  || ||||||||| ||||||||||||||| |||||||| |||||| ||||||||    
T  30698351 cacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaa 30698289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 471 - 533
Target Start/End: Original strand, 30751356 - 30751418
Alignment:
Q  471 aaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 533  Q
    ||||| || ||||| ||||||||||||||||  ||||||| |||| |||||||||||||||||    
T  30751356 aaatatttaaattcactcaaaacattacattatctcaaaacattctctcatccaaacacactc 30751418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 390 - 459
Target Start/End: Complemental strand, 32840251 - 32840181
Alignment:
Q  390 ccttagagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttg 459  Q
    |||||||||||||||||||| || |||| |||||||||||| || ||| ||||||||||||  ||||||||    
T  32840251 ccttagagtatgtttggatgaggaaatgttttgagggaatttaaatactttgaggtgaatttcattgtttg 32840181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 496
Target Start/End: Original strand, 11824704 - 11824801
Alignment:
Q  400 tgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacatt 496  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||| ||||||| |    |  ||| ||||| ||| || ||||||||||||||||||||    
T  11824704 tgtttggatggaggaatgttttgagggaattcaactactttgagatgaattcaaacaatataattcaccttaaagtagttgaattccctcaaaacatt 11824801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 459 - 528
Target Start/End: Complemental strand, 40026139 - 40026070
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaaca 528  Q
    |||| ||||||||| || || |||| ||||||||||||| ||| ||||||||||||||| ||| ||||||    
T  40026139 gaattcacctcaaagtatttaaatttcctcaaaacattatattacctcaaaatattcccccattcaaaca 40026070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 390 - 496
Target Start/End: Complemental strand, 3345891 - 3345783
Alignment:
Q  390 ccttagagtatgtttggatgggggaatgctttgagggaattcaac-tac-ttgaggtgaattctattgtttgaatccacctcaaaataattgaattccct 487  Q
    ||||||||  ||||||||||||| |||| |||||||||||||||| ||| ||||||||||||| |    | ||||  |||| ||| || |||||||||||    
T  3345891 ccttagagcgtgtttggatggggaaatgttttgagggaattcaacgtactttgaggtgaattcaaacaatagaatttaccttaaagtagttgaattccct 3345792  T
Q  488 caaaacatt 496  Q
    |||||||||    
T  3345791 caaaacatt 3345783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 392 - 459
Target Start/End: Original strand, 20935723 - 20935790
Alignment:
Q  392 ttagagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttg 459  Q
    ||||||| ||||||||||||| |||| ||||||||||||||| ||| |||| |||||||| ||||||||    
T  20935723 ttagagtgtgtttggatgggg-aatgttttgagggaattcaaatactttgatgtgaattccattgtttg 20935790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 458
Target Start/End: Original strand, 11595343 - 11595402
Alignment:
Q  400 tgtttggatgggggaatgctttgagggaattcaacta-cttgaggtgaattctattgttt 458  Q
    ||||||||||||| |||| ||||||||||||||| ||  ||||||||||||| |||||||    
T  11595343 tgtttggatggggtaatgttttgagggaattcaaatattttgaggtgaattccattgttt 11595402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 498
Target Start/End: Complemental strand, 11595394 - 11595355
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattac 498  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  11595394 gaattcacctcaaaatatttgaattccctcaaaacattac 11595355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 471 - 534
Target Start/End: Complemental strand, 39630288 - 39630225
Alignment:
Q  471 aaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||| |||||||||||||||||| |||||| |||||||| ||| |  ||| ||||||||||||    
T  39630288 aaatatttgaattccctcaaaacaatacattccctcaaaacatttctccattcaaacacactct 39630225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 391 - 429
Target Start/End: Complemental strand, 1583885 - 1583847
Alignment:
Q  391 cttagagtatgtttggatgggggaatgctttgagggaat 429  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  1583885 cttagagtgtgtttggatgggggaatgttttgagggaat 1583847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 480 - 534
Target Start/End: Original strand, 7228031 - 7228085
Alignment:
Q  480 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||| |||||||||||||||  ||||||| ||| || ||||||||||||||||    
T  7228031 aattccttcaaaacattacattctctcaaaacatttccccatccaaacacactct 7228085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 534
Target Start/End: Original strand, 11981580 - 11981629
Alignment:
Q  485 cctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||||||||||| ||  |||||||||  |||||||||||||||||    
T  11981580 cctcaaaacattacattaccctaaaatattctttcatccaaacacactct 11981629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 433
Target Start/End: Complemental strand, 19231334 - 19231301
Alignment:
Q  400 tgtttggatgggggaatgctttgagggaattcaa 433  Q
    |||||||||||||||||| |||||||||||||||    
T  19231334 tgtttggatgggggaatgttttgagggaattcaa 19231301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 464 - 508
Target Start/End: Original strand, 7167670 - 7167714
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaa 508  Q
    ||||||||| || ||||||||| ||||||||||||||| ||||||    
T  7167670 cacctcaaagtatttgaattccttcaaaacattacattccctcaa 7167714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 459 - 503
Target Start/End: Original strand, 14954351 - 14954395
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgc 503  Q
    |||| ||||| ||| || |||||||||||||||||||||||||||    
T  14954351 gaattcaccttaaagtagttgaattccctcaaaacattacattgc 14954395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 459 - 507
Target Start/End: Original strand, 32839646 - 32839694
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctca 507  Q
    |||| ||| ||||| || ||||||||||||||||||||||||| |||||    
T  32839646 gaattcacgtcaaagtatttgaattccctcaaaacattacattccctca 32839694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 39630268 - 39630308
Alignment:
Q  419 tttgagggaattcaactacttgaggtgaattctattgtttg 459  Q
    ||||||||||||||| || |||||| |||||||||||||||    
T  39630268 tttgagggaattcaaatatttgaggggaattctattgtttg 39630308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 2e-45; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 414 - 534
Target Start/End: Original strand, 9763050 - 9763171
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  9763050 aatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcacaataattgaattccctcaaaacattacattacctcaaaata 9763149  T
Q  513 ttccctcatccaaacacactct 534  Q
    ||||  ||||||||||||||||    
T  9763150 ttcctccatccaaacacactct 9763171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 414 - 532
Target Start/End: Complemental strand, 6919828 - 6919710
Alignment:
Q  414 aatgctttgagggaattcaactacttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatat 513  Q
    |||| |||||||||||||||| | || |||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||  ||    
T  6919828 aatgttttgagggaattcaaccatttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaccat 6919729  T
Q  514 tccctcatccaaacacact 532  Q
    |||  ||||||||||||||    
T  6919728 tcctccatccaaacacact 6919710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 394 - 534
Target Start/End: Complemental strand, 9285788 - 9285647
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaa 492  Q
    ||||| ||||| |||| ||||||| ||||||||||||||||||||| ||| ||||||| |    | |||| || |||||| || ||||||||||||||||    
T  9285788 agagtgtgtttagatgagggaatgttttgagggaattcaactactttgagatgaattcaaacaatagaattcagctcaaagtagttgaattccctcaaaa 9285689  T
Q  493 cattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||| |||||||| |||||| ||||||||||||||||    
T  9285688 cattacattccctcaaaacattcccccatccaaacacactct 9285647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 414 - 496
Target Start/End: Original strand, 9285685 - 9285768
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacatt 496  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||||||| || |||||| || ||||||||||||||||||||    
T  9285685 aatgttttgagggaattcaactactttgagctgaattctattgtttgaattcatctcaaagtagttgaattccctcaaaacatt 9285768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 414 - 534
Target Start/End: Complemental strand, 776201 - 776080
Alignment:
Q  414 aatgctttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||| ||||||||||||| | |||||||||||||||||||||  | || ||| || ||||||| ||||||||||||||||| |||||||| |    
T  776201 aatgttttgaggaaattcaactactttaaggtgaattctattgtttgaatttaacttaaagtagttgaatttcctcaaaacattacattccctcaaaaca 776102  T
Q  513 ttccctcatccaaacacactct 534  Q
    || |  |||| |||||||||||    
T  776101 tttctccatctaaacacactct 776080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 414 - 534
Target Start/End: Original strand, 6919746 - 6919866
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| ||||||||||| |    | |||| ||||| ||| |  |||||||||||||||||||||| || |||||||| |    
T  6919746 aatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaa-tggttgaattccctcaaaacattactttccctcaaaaca 6919844  T
Q  513 ttccctcatccaaacacactct 534  Q
    ||||| ||||||||||||||||    
T  6919845 ttcccccatccaaacacactct 6919866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 468 - 534
Target Start/End: Original strand, 34244987 - 34245053
Alignment:
Q  468 tcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||| || ||||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  34244987 tcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 34245053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 459 - 532
Target Start/End: Complemental strand, 9763087 - 9763014
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    |||| ||||||||| || ||||||||||||||||||||||||| |||||||| ||| || | ||||||||||||    
T  9763087 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccttccaaacacact 9763014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 29889432 - 29889507
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||| ||||| || ||||||||||||||||||||||||| | |||||| |||||  ||||||||||||||||    
T  29889432 gaattcacatcaaagtatttgaattccctcaaaacattacattccatcaaaacattcctccatccaaacacactct 29889507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 464 - 534
Target Start/End: Complemental strand, 13487345 - 13487275
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||| || ||||||||||||| |||| |||||| |||||||| |||||| |||| |||||||||||    
T  13487345 cacctcaaagtatttgaattccctcataacactacattccctcaaaacattcccccatctaaacacactct 13487275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 464 - 530
Target Start/End: Original strand, 15299514 - 15299579
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 530  Q
    ||||||||| || ||||||||| ||||||||||||||| |||||||| |||||| ||||||||||||    
T  15299514 cacctcaaagtagttgaattccttcaaaacattacattccctcaaaacattccc-catccaaacaca 15299579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 464 - 534
Target Start/End: Complemental strand, 28918235 - 28918165
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||| || ||||||| ||| ||||||||||||| |||||||| |||||  ||||||||||||||||    
T  28918235 cacctcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacacactct 28918165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 1195351 - 1195416
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgttt 458  Q
    ||||| |||||||||||||||||| ||||||||| ||||| ||| ||||||||||||| |||||||    
T  1195351 agagtgtgtttggatgggggaatgttttgagggatttcaaatactttgaggtgaattccattgttt 1195416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 534
Target Start/End: Complemental strand, 8574752 - 8574695
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||||||||||||||||||||||  ||||||| ||| || ||||||||||||||||    
T  8574752 ttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacacactct 8574695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 534
Target Start/End: Original strand, 8574767 - 8574824
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||||||||||||||||||||||  ||||||| ||| || ||||||||||||||||    
T  8574767 ttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacacactct 8574824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 1368552 - 1368477
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||||||||| | ||||||||||| |||| ||||||||  ||||||| |||||  ||||||||||||||||    
T  1368552 gaattcacctcaaaacatttgaattcccttaaaatattacattctctcaaaacattcctccatccaaacacactct 1368477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 776164 - 776239
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||| ||| || ||||||| ||||||||||||||||| |||||||| |||  |  |||||||||||||||    
T  776164 gaattcaccttaaagtagttgaatttcctcaaaacattacattccctcaaaacattttcctatccaaacacactct 776239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 429
Target Start/End: Original strand, 9285643 - 9285682
Alignment:
Q  390 ccttagagtatgtttggatgggggaatgctttgagggaat 429  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  9285643 ccttagagtgtgtttggatgggggaatgttttgagggaat 9285682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 459
Target Start/End: Original strand, 8475179 - 8475245
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttg 459  Q
    ||||| ||||||||||||| |||| ||||||||||||||| ||| ||  ||||||||| ||||||||    
T  8475179 agagtgtgtttggatggggaaatgttttgagggaattcaaatacttttgggtgaattccattgtttg 8475245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 530
Target Start/End: Complemental strand, 15832536 - 15832470
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 530  Q
    |||| |||| || ||||||||||| ||||||||||||| | || ||| ||| |||||||||||||||    
T  15832536 caccccaaagtatttgaattcccttaaaacattacattccttcgaaacattacctcatccaaacaca 15832470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 429
Target Start/End: Original strand, 33733430 - 33733467
Alignment:
Q  392 ttagagtatgtttggatgggggaatgctttgagggaat 429  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  33733430 ttagagtgtgtttggatgggggaatgttttgagggaat 33733467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 464 - 516
Target Start/End: Complemental strand, 15299469 - 15299417
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattcc 516  Q
    ||||||||| || |||||||| ||||||||||||||||  ||||||| |||||    
T  15299469 cacctcaaagtagttgaattctctcaaaacattacattcgctcaaaacattcc 15299417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 494 - 534
Target Start/End: Complemental strand, 33733472 - 33733432
Alignment:
Q  494 attacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||||| |||||||| |||||| ||||||||||||||||    
T  33733472 attacattccctcaaaacattcccccatccaaacacactct 33733432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 4e-43; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 414 - 534
Target Start/End: Original strand, 5644715 - 5644836
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||      
T  5644715 aatgttttgagggaattcaactactttgaggtgaattctattgtttgaacccacctcaaaataattgaattccctcaaaacattacattacctcaaaacg 5644814  T
Q  513 ttccctcatccaaacacactct 534  Q
    ||||| ||||||||||||||||    
T  5644815 ttcccccatccaaacacactct 5644836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 414 - 534
Target Start/End: Original strand, 29065857 - 29065978
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |    
T  29065857 aatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattaccttaaaaca 29065956  T
Q  513 ttccctcatccaaacacactct 534  Q
    ||||  ||||||||||||||||    
T  29065957 ttcctccatccaaacacactct 29065978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 390 - 534
Target Start/End: Original strand, 40853983 - 40854129
Alignment:
Q  390 ccttagagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttgaatccacctcaaaataattgaatt-ccct 487  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||| || |||||| || ||||||| ||||    
T  40853983 ccttagagtgtgtttggatgggggaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattcccct 40854082  T
Q  488 caaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||| |||||||| ||||| || ||| || ||||||||||||||||    
T  40854083 caaaatattacattccctcagaacatttccccatccaaacacactct 40854129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 414 - 534
Target Start/End: Complemental strand, 21636006 - 21635885
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||| |||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  21636006 aatgttttgaaggaatttaactactttgagatgaattctattgtttgaatccacctcaaaataattgaatcccctcaaaacattacattacctcaaaata 21635907  T
Q  513 ttccctcatccaaacacactct 534  Q
    ||| | ||||||| ||||||||    
T  21635906 ttctcccatccaagcacactct 21635885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 394 - 532
Target Start/End: Original strand, 46069404 - 46069545
Alignment:
Q  394 agagtatgtttggatgggggaatgc-----tttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccct 487  Q
    ||||| ||||||||||||||||||      ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  46069404 agagtgtgtttggatgggggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccatctcaaaataattgaattccct 46069503  T
Q  488 caaaacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    |  ||||||||||| |||| |||||||||| ||||||||||||||    
T  46069504 c--aacattacattacctc-aaatattcccccatccaaacacact 46069545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 414 - 534
Target Start/End: Complemental strand, 44915316 - 44915195
Alignment:
Q  414 aatgctttgagggaattcaactact-tgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| |||||||||||||||||||| | |||||||||||||||||||||| ||||||||| || ||||||||| |||||||||||| || |||||||| |    
T  44915316 aatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcacctcaaagtagttgaattccttcaaaacattacgttccctcaaaaaa 44915217  T
Q  513 ttccctcatccaaacacactct 534  Q
    ||| ||||||||||||||||||    
T  44915216 ttctctcatccaaacacactct 44915195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 414 - 534
Target Start/End: Complemental strand, 2057516 - 2057395
Alignment:
Q  414 aatgctttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| | |||||||| |||||||||||  ||||||||| || |||||||||||||||||||||||||  ||||||| |    
T  2057516 aatgttttgagggaattcaactacttcaaggtgaattttattgtttgaactcacctcaaagtagttgaattccctcaaaacattacattcgctcaaaaca 2057417  T
Q  513 ttccctcatccaaacacactct 534  Q
    ||||| ||||||||||||||||    
T  2057416 ttcccccatccaaacacactct 2057395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 414 - 534
Target Start/End: Original strand, 40110775 - 40110897
Alignment:
Q  414 aatgctttgagggaattcaactacttga-ggtgaattctattgttt-gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaat 511  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||| |||| ||||||||| || ||||||||||||||||||||||||| |||| |||     
T  40110775 aatgttttgagggaattcaactactttaaggtgaattctattgttttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcgaaac 40110874  T
Q  512 attccctcatccaaacacactct 534  Q
    ||| || ||||||||||||||||    
T  40110875 atttccccatccaaacacactct 40110897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 414 - 534
Target Start/End: Complemental strand, 49052906 - 49052786
Alignment:
Q  414 aatgctttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||||| || |||||| || |||||||| |||||||||||||||| |||||||| |    
T  49052906 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattcactcaaaacattacatt-cctcaaaaca 49052808  T
Q  513 ttccctcatccaaacacactct 534  Q
    ||  ||||||||||||||||||    
T  49052807 ttttctcatccaaacacactct 49052786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 421 - 534
Target Start/End: Original strand, 34388310 - 34388424
Alignment:
Q  421 tgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctc 519  Q
    |||| |||||||||||||| | ||||||||| ||||||||||  ||||||||| || |||||||||||||||| |||||||| |||||||| ||||| ||    
T  34388310 tgagagaattcaactactttaaggtgaattccattgtttgaactcacctcaaagtagttgaattccctcaaaatattacattccctcaaaacattccatc 34388409  T
Q  520 atccaaacacactct 534  Q
    || ||||||||||||    
T  34388410 attcaaacacactct 34388424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 414 - 532
Target Start/End: Original strand, 43955555 - 43955671
Alignment:
Q  414 aatgctttgagggaattcaactacttgagg-tgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| | | |||||||||||    |||| ||||| ||| || ||||||||||||||||||||||||| |||||||| |    
T  43955555 aatgttttgagggaattcaactactttaagatgaattctatta---gaatgcaccttaaagtagttgaattccctcaaaacattacattccctcaaaaca 43955651  T
Q  513 ttccctcatccaaacacact 532  Q
    ||||| ||||||||||||||    
T  43955652 ttcccccatccaaacacact 43955671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 35776939 - 35777014
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||||||| || ||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  35776939 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattccctcatccaaacacactct 35777014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 414 - 534
Target Start/End: Complemental strand, 40110859 - 40110737
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgttt-gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaat 511  Q
    |||| ||||||||||||||||||||| ||||||||||| |     | |||| ||||| ||| || ||||||||||||||||||||||||| ||||||||     
T  40110859 aatgttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaac 40110760  T
Q  512 attccctcatccaaacacactct 534  Q
    |||||| ||||||||||||||||    
T  40110759 attcccccatccaaacacactct 40110737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 394 - 473
Target Start/End: Original strand, 31913236 - 31913316
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaactacttgaggtg-aattctattgtttgaatccacctcaaaa 473  Q
    ||||| |||||||||||||||||| |||||||||||||||||| || ||||| |||||||||||||||||  |||||||||    
T  31913236 agagtgtgtttggatgggggaatgttttgagggaattcaactatttaaggtgaaattctattgtttgaatttacctcaaaa 31913316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 26162121 - 26162196
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||||||| || ||||||||||||| ||||||||||| |||||||| |||||| ||||||||||||||||    
T  26162121 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 26162196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 31632797 - 31632722
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||||||| || ||||||||||||| ||||||||||| |||||||| |||||| ||||||||||||||||    
T  31632797 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 31632722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 414 - 534
Target Start/End: Complemental strand, 43955635 - 43955517
Alignment:
Q  414 aatgctttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| | |||| |||||| |    |||| || || ||| || ||||||||||||||||||||||||| |||||||| |    
T  43955635 aatgttttgagggaattcaactactttaaggtgcattctaata---gaattcatcttaaagtagttgaattccctcaaaacattacattccctcaaaaca 43955539  T
Q  513 ttccctcatccaaacacactct 534  Q
    ||||| ||||||||||||||||    
T  43955538 ttcccccatccaaacacactct 43955517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 477 - 534
Target Start/End: Original strand, 2057497 - 2057554
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||    
T  2057497 ttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 2057554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 5644752 - 5644677
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||||||| || ||||||||||||||||||||||||| |||||||| |||||  ||| ||||||||||||    
T  5644752 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacacactct 5644677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 23455231 - 23455302
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 530  Q
    |||| |||| |||| || |||||||||||||||||| |||||| |||||||| |||||||||||||||||||    
T  23455231 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattccctcatccaaacaca 23455302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 28539152 - 28539227
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||| |||| || |||||||||||||||||| |||||| |||||||| |||||| ||||||||||||||||    
T  28539152 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacacactct 28539227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 29065894 - 29065819
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||||||| || ||||||||||||||||||||||||| |||||||| ||||   ||||||||||||||||    
T  29065894 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcatccatccaaacacactct 29065819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 468 - 534
Target Start/End: Original strand, 6498758 - 6498824
Alignment:
Q  468 tcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||| || ||||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  6498758 tcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 6498824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 468 - 534
Target Start/End: Original strand, 25189219 - 25189285
Alignment:
Q  468 tcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||| || |||||||||||||||||||| |||| |||||||| |||||| ||||||||||||||||    
T  25189219 tcaaagtatttgaattccctcaaaacattgcattacctcaaaacattcccacatccaaacacactct 25189285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 465 - 534
Target Start/End: Original strand, 34398938 - 34399008
Alignment:
Q  465 acctcaaaataattgaattc-cctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||||| || |||||||| ||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  34398938 acctcaaagtagttgaattcacctcaaaacattacattccctcaaaacattcccccatccaaacacactct 34399008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 419 - 534
Target Start/End: Complemental strand, 34388381 - 34388265
Alignment:
Q  419 tttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccc 517  Q
    ||||||||||||||||||||| ||||||| ||| |    | |||| ||||| ||| || |||||||| |||| |||||||| || |||||||||||| ||    
T  34388381 tttgagggaattcaactactttgaggtgagttcaaacaatggaattcaccttaaagtagttgaattctctcagaacattacttttcctcaaaatatttcc 34388282  T
Q  518 tcatccaaacacactct 534  Q
     ||||||||||||||||    
T  34388281 ccatccaaacacactct 34388265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 29639199 - 29639274
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||||||||||| ||||||| ||||| ||||||||||| ||| |||| |||||| |||||| |||||||||    
T  29639199 gaattcacctcaaaatatttgaatttcctcataacattacattccctgaaaacattcccccatccatacacactct 29639274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 39342626 - 39342701
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||| |||| || ||||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  39342626 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 39342701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 533
Target Start/End: Original strand, 9784920 - 9784989
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 533  Q
    |||| |||| || |||||||||||||||||| |||||| |||||||| |||||  |||||||||||||||    
T  9784920 caccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcctccatccaaacacactc 9784989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 534
Target Start/End: Original strand, 14603264 - 14603321
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  14603264 ttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 14603321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 391 - 459
Target Start/End: Original strand, 32650588 - 32650657
Alignment:
Q  391 cttagagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttg 459  Q
    |||||||| ||||| ||||| |||||| ||||||||||||||| ||| |||||||||||| |||||||||    
T  32650588 cttagagtgtgtttcgatggaggaatgttttgagggaattcaaatactttgaggtgaattttattgtttg 32650657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 534
Target Start/End: Complemental strand, 35455861 - 35455804
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  35455861 ttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 35455804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 464 - 532
Target Start/End: Original strand, 22391576 - 22391644
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    |||||||||||| || ||||| |||||||||||||||| |||||||| |||  ||||| ||||||||||    
T  22391576 cacctcaaaatatttaaattctctcaaaacattacattccctcaaaacattatctcattcaaacacact 22391644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 18789230 - 18789305
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||| ||| || ||||||||||||| ||||||| |||  |||||||||||||  ||||||||||||||||    
T  18789230 gaattcaccttaaagtatttgaattccctcataacattatattctctcaaaatattcctccatccaaacacactct 18789305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 23548595 - 23548670
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||| |||| || ||||||| |||||||||| |||||| |||||||| |||||  ||||||||||||||||    
T  23548595 gaattcaccccaaagtatttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaaacacactct 23548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 487 - 534
Target Start/End: Complemental strand, 29195756 - 29195709
Alignment:
Q  487 tcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  29195756 tcaaaacattacattacctcaaaatattcctccatccaaacacactct 29195709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 391 - 459
Target Start/End: Complemental strand, 13815038 - 13814969
Alignment:
Q  391 cttagagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttg 459  Q
    |||||||| ||||||||| |||||||| ||||||||||||||| ||| |||| |||||||| ||| ||||    
T  13815038 cttagagtgtgtttggataggggaatgttttgagggaattcaaatactttgatgtgaattccattatttg 13814969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 395 - 459
Target Start/End: Complemental strand, 30587943 - 30587878
Alignment:
Q  395 gagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttg 459  Q
    |||| |||||||||||||||||| ||||||||||||||| ||| || | |||||||| ||||||||    
T  30587943 gagtgtgtttggatgggggaatgttttgagggaattcaaatactttaatgtgaattccattgtttg 30587878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 414 - 534
Target Start/End: Original strand, 46481984 - 46482104
Alignment:
Q  414 aatgctttgagggaattcaactacttgagg-tgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||| |||| ||||| |||| | ||||||||||||||||||| || ||| ||||| |||||||  |||||||||||||||| | |||| | |    
T  46481984 aatgttttgaggaaatttaactatttgaagatgaattctattgtttgaattcaactc-aaatagttgaattttctcaaaacattacattccttcaacaca 46482082  T
Q  513 ttccctcatccaaacacactct 534  Q
    || |  ||| ||||||||||||    
T  46482083 tttctccattcaaacacactct 46482104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 389 - 429
Target Start/End: Complemental strand, 34399013 - 34398973
Alignment:
Q  389 gccttagagtatgtttggatgggggaatgctttgagggaat 429  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  34399013 gccttagagtgtgtttggatgggggaatgttttgagggaat 34398973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 464 - 508
Target Start/End: Complemental strand, 43791160 - 43791116
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaa 508  Q
    ||||||||| || ||||||||||||||||||||||||| ||||||    
T  43791160 cacctcaaagtatttgaattccctcaaaacattacattccctcaa 43791116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 459
Target Start/End: Complemental strand, 30080847 - 30080776
Alignment:
Q  389 gccttagagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttg 459  Q
    |||| ||||| |||||||||||||||||| ||||||| |||| || ||| || |||||||||| ||||||||    
T  30080847 gcctaagagtgtgtttggatgggggaatgttttgaggaaatttaaatactttcaggtgaattccattgtttg 30080776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 391 - 429
Target Start/End: Complemental strand, 28539230 - 28539192
Alignment:
Q  391 cttagagtatgtttggatgggggaatgctttgagggaat 429  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  28539230 cttagagtgtgtttggatgggggaatgttttgagggaat 28539192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 46069466 - 46069424
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacatt 501  Q
    |||| ||||||||| || |||||||||||||||||||||||||    
T  46069466 gaattcacctcaaagtagttgaattccctcaaaacattacatt 46069424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 18926812 - 18926861
Alignment:
Q  483 tccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    ||||||||||||||||||| ||||||||| | ||| |||| |||||||||    
T  18926812 tccctcaaaacattacattacctcaaaatgtccccccatcaaaacacact 18926861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 536
Target Start/End: Original strand, 19865564 - 19865597
Alignment:
Q  503 cctcaaaatattccctcatccaaacacactctca 536  Q
    |||||||| |||||||||||||||||||||||||    
T  19865564 cctcaaaacattccctcatccaaacacactctca 19865597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 528
Target Start/End: Original strand, 21635977 - 21636038
Alignment:
Q  467 ctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaaca 528  Q
    |||||| || || |||||| ||||||||||||||| |||||||| ||| || ||||||||||    
T  21635977 ctcaaagtagttaaattccttcaaaacattacattccctcaaaacatttccccatccaaaca 21636038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 429
Target Start/End: Complemental strand, 26162198 - 26162161
Alignment:
Q  392 ttagagtatgtttggatgggggaatgctttgagggaat 429  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  26162198 ttagagtgtgtttggatgggggaatgttttgagggaat 26162161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 534
Target Start/End: Complemental strand, 30524312 - 30524255
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||||||||||||||||||| | |||||| ||| |  |||||| |||||||||    
T  30524312 ttgaattccctcaaaacattacattccttcaaaacattactccatccatacacactct 30524255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 429
Target Start/End: Original strand, 35455802 - 35455839
Alignment:
Q  392 ttagagtatgtttggatgggggaatgctttgagggaat 429  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  35455802 ttagagtgtgtttggatgggggaatgttttgagggaat 35455839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 400 - 459
Target Start/End: Original strand, 14790138 - 14790197
Alignment:
Q  400 tgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttg 459  Q
    ||||||||||||| |||| ||||||||||||||| ||| |||||||||||| |||| ||||    
T  14790138 tgtttggatgggg-aatgttttgagggaattcaaatactttgaggtgaattttattatttg 14790197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 477 - 525
Target Start/End: Original strand, 22351874 - 22351922
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaa 525  Q
    |||||||| |||||||||||||||| || ||||| |||||| |||||||    
T  22351874 ttgaattctctcaaaacattacattaccccaaaacattcccccatccaa 22351922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 6e-42; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 414 - 532
Target Start/End: Original strand, 3853654 - 3853773
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  3853654 aatgttttgaggaaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctccaaacattacattacctcaaaata 3853753  T
Q  513 ttccctcatccaaacacact 532  Q
    || || ||||||||||||||    
T  3853754 tttccccatccaaacacact 3853773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 414 - 532
Target Start/End: Original strand, 3858112 - 3858231
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  3858112 aatgttttgaggaaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctccaaacattacattacctcaaaata 3858211  T
Q  513 ttccctcatccaaacacact 532  Q
    || || ||||||||||||||    
T  3858212 tttccccatccaaacacact 3858231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 414 - 532
Target Start/End: Complemental strand, 13404948 - 13404829
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13404948 aatgttttgagggaattcaactactttgagatgaattttattgtttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaata 13404849  T
Q  513 ttccctcatccaaacacact 532  Q
    || || ||||||||||||||    
T  13404848 tttccccatccaaacacact 13404829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 414 - 534
Target Start/End: Complemental strand, 17110990 - 17110869
Alignment:
Q  414 aatgctttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||||| || |||||| || ||||||||||||||||||||||||| |||||||| |    
T  17110990 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaaca 17110891  T
Q  513 ttccctcatccaaacacactct 534  Q
    || || ||||||||||||||||    
T  17110890 tttccccatccaaacacactct 17110869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 394 - 492
Target Start/End: Original strand, 42739949 - 42740048
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaa 492  Q
    ||||| ||||||||||| |||||| ||||||||||||||||||||| ||| |||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  42739949 agagtgtgtttggatggaggaatgttttgagggaattcaactactttgagatgaattttattgttagaatccacctcaaaataattgaattccctcaaaa 42740048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 454 - 534
Target Start/End: Original strand, 37268086 - 37268166
Alignment:
Q  454 tgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  37268086 tgtttgaatccacctcaaaataattaaattccctcaaaacattacattacctcaaaatattcccctatccaaacacactct 37268166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 393 - 530
Target Start/End: Complemental strand, 30435386 - 30435250
Alignment:
Q  393 tagagtatgtttggatgggggaatgctttgagggaattcaactacttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaa 492  Q
    |||||| ||||||||||||| |||| |||||||||||||||||| || |||| ||||||||||||| ||| || ||| ||||| || ||||||||| |||    
T  30435386 tagagtgtgtttggatggggaaatgttttgagggaattcaactatttaaggtaaattctattgtttaaattcaactc-aaatagttaaattccctccaaa 30435288  T
Q  493 cattacattgcctcaaaatattccctcatccaaacaca 530  Q
    ||||||||| |||||||| ||| |  ||||||||||||    
T  30435287 cattacattccctcaaaacatttctccatccaaacaca 30435250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 394 - 534
Target Start/End: Original strand, 14799979 - 14800119
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaactacttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaac 493  Q
    ||||| |||||||||||||||||| |||||||||||| ||||| ||||||||| ||| |    |  ||| |||||  || || |||||||||||||||||    
T  14799979 agagtgtgtttggatgggggaatgttttgagggaattaaactatttgaggtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaaaac 14800078  T
Q  494 attacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||| || ||||||||||||||| ||||||||||||||||    
T  14800079 attactttccctcaaaatattcccccatccaaacacactct 14800119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 390 - 534
Target Start/End: Original strand, 42711300 - 42711439
Alignment:
Q  390 ccttagagtatgtttggatgggggaatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctc 488  Q
    ||||||||| ||||||||||||| |||| ||||||| ||||||||||||| ||| ||||| ||      ||||| || |||||| || ||||||||||||    
T  42711300 ccttagagtgtgtttggatggggaaatgttttgaggaaattcaactactttgagttgaatact------tgaattcaactcaaagtagttgaattccctc 42711393  T
Q  489 aaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||||||| |||||||| ||||||  |||||||||||||||    
T  42711394 aaaacattacattccctcaaaacattccccaatccaaacacactct 42711439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 457 - 517
Target Start/End: Original strand, 40046872 - 40046932
Alignment:
Q  457 ttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccc 517  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  40046872 ttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaacattccc 40046932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 3853691 - 3853616
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||||||| || ||||||| ||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  3853691 gaattcacctcaaagtagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactct 3853616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 3858149 - 3858074
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||||||| || ||||||| ||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  3858149 gaattcacctcaaagtagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactct 3858074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 24045035 - 24044960
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||||||  || ||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||    
T  24045035 gaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattccctcatccaaacacactct 24044960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 414 - 534
Target Start/End: Original strand, 33902705 - 33902825
Alignment:
Q  414 aatgctttgagggaattcaactacttgaggtgaattctattg-tttgaatccacctcaaaata-attgaattccctcaaaacattacattgcctcaaaat 511  Q
    |||| |||||||||||||||||||||  |||||||||||||| ||||||| ||||||||| ||  ||||||||||||||||||  ||||| |||| |||     
T  33902705 aatgttttgagggaattcaactactt-tggtgaattctattgttttgaattcacctcaaagtagtttgaattccctcaaaacaaaacattccctc-aaac 33902802  T
Q  512 attccctcatccaaacacactct 534  Q
    |||||| ||||| ||||||||||    
T  33902803 attcccccatcccaacacactct 33902825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 414 - 534
Target Start/End: Original strand, 17110907 - 17111028
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| ||| ||||||| |    | |||| ||||| ||| || ||||||||||||||||||||||||| |||||||| |    
T  17110907 aatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaaca 17111006  T
Q  513 ttccctcatccaaacacactct 534  Q
    || |  ||||||||||||||||    
T  17111007 tttctccatccaaacacactct 17111028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 391 - 459
Target Start/End: Original strand, 34008796 - 34008865
Alignment:
Q  391 cttagagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttg 459  Q
    |||||||| |||||||||||||||||| ||||||||||||||| ||| ||||||||||||| ||||||||    
T  34008796 cttagagtgtgtttggatgggggaatgttttgagggaattcaaatactttgaggtgaattccattgtttg 34008865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 477 - 532
Target Start/End: Original strand, 4156269 - 4156324
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    ||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||    
T  4156269 ttgaattccctcaaaacattacattccctcaaaatattctcccatccaaacacact 4156324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 471 - 534
Target Start/End: Complemental strand, 31807471 - 31807409
Alignment:
Q  471 aaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||| ||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  31807471 aaatagttgaattccctcaaaacattacatt-cctcaaaacattctctcatccaaacacactct 31807409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 476 - 534
Target Start/End: Complemental strand, 14991750 - 14991692
Alignment:
Q  476 attgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||||| ||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  14991750 attgaattgcctcaaaacattacattacctcaaaacattcccccatccaaacacactct 14991692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 390 - 459
Target Start/End: Original strand, 29611384 - 29611454
Alignment:
Q  390 ccttagagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttg 459  Q
    ||||||||| |||||||||||||||||| ||||||||||||||| ||| ||||||||||||  ||||||||    
T  29611384 ccttagagtgtgtttggatgggggaatgttttgagggaattcaaatactttgaggtgaatttcattgtttg 29611454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 477 - 534
Target Start/End: Complemental strand, 33902724 - 33902667
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  33902724 ttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 33902667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 394 - 496
Target Start/End: Complemental strand, 38573541 - 38573433
Alignment:
Q  394 agagtatgtttggatgggggaatgc-----tttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccct 487  Q
    ||||| ||||||||||||||||||      ||||||| ||||||||||||| ||| ||||||||||||||||||| || || ||| || ||||||| |||    
T  38573541 agagtgtgtttggatgggggaatgtagtgttttgaggaaattcaactactttgagttgaattctattgtttgaattcaactaaaagtagttgaatttcct 38573442  T
Q  488 caaaacatt 496  Q
    |||||||||    
T  38573441 caaaacatt 38573433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 11744727 - 11744802
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||| ||| || ||||||||| ||| ||||||||||| |||| |||||||| ||||||||||||||||||    
T  11744727 gaattcaccttaaactagttgaattccttcacaacattacattccctctaaatattctctcatccaaacacactct 11744802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 414 - 496
Target Start/End: Complemental strand, 14800081 - 14799999
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacatt 496  Q
    |||| |||||||||||||||||||||  ||||||||| |||||||||||  |||||| ||||| || |||||||||||||||||    
T  14800081 aatgttttgagggaattcaactacttcaaggtgaattttattgtttgaactcacctc-aaatagtttaattccctcaaaacatt 14799999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 23011809 - 23011734
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||||||| || ||||||||||||| ||||||||||| |||||||| |||| | | ||||||||||||||    
T  23011809 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattctcccgtccaaacacactct 23011734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 29257359 - 29257434
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||| |||| || ||||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  29257359 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 29257434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 33377305 - 33377380
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||| |||| || |||||||||||||||||| || ||| |||||||| |||||| ||||||||||||||||    
T  33377305 gaattcaccccaaagtatttgaattccctcaaaacaatatattccctcaaaacattcccccatccaaacacactct 33377380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 467 - 534
Target Start/End: Complemental strand, 40046871 - 40046804
Alignment:
Q  467 ctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||| || ||||||||||||||||||||||||| |||||||| ||||   ||||||||||||||||    
T  40046871 ctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcatccatccaaacacactct 40046804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 44889429 - 44889354
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||| ||||| || ||||||||||||||||||||| ||| |||||||| |||||  ||||||||||||||||    
T  44889429 gaattcacatcaaagtatttgaattccctcaaaacattatattccctcaaaacattcctccatccaaacacactct 44889354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 459
Target Start/End: Complemental strand, 30444998 - 30444932
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttg 459  Q
    ||||| ||||||||||| |||||| ||||||||||||||| ||| ||||||||||||| ||||||||    
T  30444998 agagtgtgtttggatggaggaatgttttgagggaattcaaatactttgaggtgaattccattgtttg 30444932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 464 - 534
Target Start/End: Complemental strand, 33986074 - 33986004
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||| || |||||||| |||||||||||||||| | |||| | |||||| ||||||||||||||||    
T  33986074 cacctcaaagtatttgaattctctcaaaacattacattacttcaagacattcccccatccaaacacactct 33986004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 534
Target Start/End: Original strand, 28324688 - 28324745
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||| ||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  28324688 ttgaattccttcaaaacattacattccctcaaaacattcctccatccaaacacactct 28324745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 459 - 532
Target Start/End: Original strand, 29482815 - 29482888
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    |||| |||| |||| || |||||||||||||||||| ||| || |||||||| |||||| ||||||||||||||    
T  29482815 gaattcaccccaaagtatttgaattccctcaaaacaatacgttccctcaaaacattcccccatccaaacacact 29482888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 391 - 439
Target Start/End: Complemental strand, 7202972 - 7202924
Alignment:
Q  391 cttagagtatgtttggatgggggaatgctttgagggaattcaactactt 439  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||||    
T  7202972 cttagagtgtgtttggatggaggaatgttttgagggaattcaactactt 7202924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 459
Target Start/End: Complemental strand, 26520498 - 26520438
Alignment:
Q  400 tgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttg 459  Q
    |||||||||| ||||||| ||||||||||||||| ||| ||||||||||||| ||||||||    
T  26520498 tgtttggatgagggaatgttttgagggaattcaaatactttgaggtgaattccattgtttg 26520438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 44346686 - 44346757
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 530  Q
    |||| |||| |||| || ||||||||||| |||||| |||||| |||||||| |||||| ||||||||||||    
T  44346686 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacaca 44346757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 464 - 534
Target Start/End: Complemental strand, 14308 - 14239
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||| || ||||||||||| ||||||||||||| |||| ||| |||||| ||||||||||||||||    
T  14308 caccccaaagtatttgaattcccttaaaacattacattccctccaaacattccc-catccaaacacactct 14239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 467 - 517
Target Start/End: Original strand, 13404919 - 13404969
Alignment:
Q  467 ctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccc 517  Q
    |||||| || ||||||||||||||||||||||||| |||||||| ||||||    
T  13404919 ctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccc 13404969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 468 - 534
Target Start/End: Complemental strand, 36103167 - 36103101
Alignment:
Q  468 tcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||| || ||||||| ||| ||||||||||||| |||||||| |||||  ||||||||||||||||    
T  36103167 tcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacacactct 36103101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 414 - 473
Target Start/End: Complemental strand, 4156288 - 4156228
Alignment:
Q  414 aatgctttgagggaattcaactacttgagg-tgaattctattgtttgaatccacctcaaaa 473  Q
    |||| ||||||||||||||||||||| | | ||||||||||||||||||| || |||||||    
T  4156288 aatgttttgagggaattcaactactttaagatgaattctattgtttgaattcaactcaaaa 4156228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 449
Target Start/End: Original strand, 7202865 - 7202921
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaatt 449  Q
    ||||| |||||||||||  ||||| ||||||||||||||||||| ||||||||||||    
T  7202865 agagtgtgtttggatggatgaatgttttgagggaattcaactactttgaggtgaatt 7202921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 517
Target Start/End: Complemental strand, 8049323 - 8049271
Alignment:
Q  465 acctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccc 517  Q
    |||||||| || ||||||||||||||||||||| ||| |||||||| ||||||    
T  8049323 acctcaaagtatttgaattccctcaaaacattatattccctcaaaacattccc 8049271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 486 - 534
Target Start/End: Original strand, 32626069 - 32626117
Alignment:
Q  486 ctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||||||||||||| |||||||| |||||| ||||||| ||||||||    
T  32626069 ctcaaaacattacattccctcaaaagattcccccatccaagcacactct 32626117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 395 - 459
Target Start/End: Original strand, 34388527 - 34388591
Alignment:
Q  395 gagtatgtttggatgggggaatgctttgagggaattcaactacttgaggtgaattctattgtttg 459  Q
    |||| |||||||||||||||||| |||||| |  ||||| || ||||||||||||| ||||||||    
T  34388527 gagtgtgtttggatgggggaatgttttgagagggttcaaatatttgaggtgaattccattgtttg 34388591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 531
Target Start/End: Original strand, 35979012 - 35979084
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacac 531  Q
    |||| ||||||||| || ||||||||||||  || |||||||| |||||||| |||||  |||||||||||||    
T  35979012 gaattcacctcaaagtatttgaattccctcttaagattacattccctcaaaacattcctccatccaaacacac 35979084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 9982711 - 9982637
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||||||||||| || ||||| |||||||||||||||| ||| |||| |||| | ||||||||||| ||||    
T  9982711 gaattcacctcaaaatatttaaattctctcaaaacattacattaccttaaaacattctc-catccaaacacgctct 9982637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 468 - 534
Target Start/End: Original strand, 515549 - 515615
Alignment:
Q  468 tcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||| || ||||| ||||| ||||||||||||| | |||||| |||||  ||||||||||||||||    
T  515549 tcaaagtatttgaactcccttaaaacattacattccttcaaaacattcctccatccaaacacactct 515615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 391 - 429
Target Start/End: Complemental strand, 29257437 - 29257399
Alignment:
Q  391 cttagagtatgtttggatgggggaatgctttgagggaat 429  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  29257437 cttagagtgtgtttggatgggggaatgttttgagggaat 29257399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 469 - 534
Target Start/End: Original strand, 1088295 - 1088360
Alignment:
Q  469 caaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||| ||||||| |||||||||| ||||||  ||||||| |||||  || |||||||||||||    
T  1088295 caaaatatttgaatttcctcaaaacaatacattctctcaaaacattcctccacccaaacacactct 1088360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 534
Target Start/End: Original strand, 27322687 - 27322732
Alignment:
Q  489 aaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||||||| |||||||| |||| | ||||||||||||||||    
T  27322687 aaaacattacattccctcaaaacattctcccatccaaacacactct 27322732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 4e-40; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 400 - 532
Target Start/End: Original strand, 28828373 - 28828504
Alignment:
Q  400 tgtttggatgggggaatgctttgagggaattcaactacttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattaca 499  Q
    |||||||||||||||||| |||||||||||  ||    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28828373 tgtttggatgggggaatgttttgagggaatgtaatgttttgagg-gaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattaca 28828471  T
Q  500 ttgcctcaaaatattccctcatccaaacacact 532  Q
    || |||||||||||| || ||||||||||||||    
T  28828472 ttacctcaaaatatttccccatccaaacacact 28828504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 414 - 534
Target Start/End: Original strand, 9764376 - 9764497
Alignment:
Q  414 aatgctttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||||  ||||||||| || ||||||||||||||||||||||||| |||| ||| |    
T  9764376 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaagtagttgaattccctcaaaacattacattccctcgaaaca 9764475  T
Q  513 ttccctcatccaaacacactct 534  Q
    ||||| ||||||||||||||||    
T  9764476 ttcccccatccaaacacactct 9764497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 414 - 534
Target Start/End: Complemental strand, 15374081 - 15373960
Alignment:
Q  414 aatgctttgagggaattcaactact-tgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| |||||||||||||||||||| | |||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||| |    
T  15374081 aatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaaa 15373982  T
Q  513 ttccctcatccaaacacactct 534  Q
    |||   ||||||||||||||||    
T  15373981 ttcttccatccaaacacactct 15373960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 419 - 534
Target Start/End: Original strand, 32390015 - 32390131
Alignment:
Q  419 tttgagggaattcaactact-tgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccc 517  Q
    |||||||||||||||||||| | |||||||||||||| ||||||| ||||||||| || ||||||||||||||||||||||||| |||||||| |||| |    
T  32390015 tttgagggaattcaactactctaaggtgaattctattatttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaaattctc 32390114  T
Q  518 tcatccaaacacactct 534  Q
    | |||||||||||||||    
T  32390115 taatccaaacacactct 32390131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 429 - 534
Target Start/End: Complemental strand, 6634120 - 6634015
Alignment:
Q  429 ttcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaac 527  Q
    ||||||||||| ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||    
T  6634120 ttcaactactttgaggtgaattctattgtttgaattcac-tcgaaataattgaattccctcaaaacattacattacctcaaaatatccccccatccaaac 6634022  T
Q  528 acactct 534  Q
    |||||||    
T  6634021 acactct 6634015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 414 - 534
Target Start/End: Complemental strand, 20523254 - 20523133
Alignment:
Q  414 aatgctttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||||| ||||||||| || ||||||||||||| || |||||||| |||||||| |    
T  20523254 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcagaatattacattccctcaaaaca 20523155  T
Q  513 ttccctcatccaaacacactct 534  Q
    ||| | ||||||||||||||||    
T  20523154 ttctcccatccaaacacactct 20523133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 419 - 534
Target Start/End: Original strand, 2316421 - 2316537
Alignment:
Q  419 tttgagggaattcaactacttga--ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattcc 516  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||| ||||||||| || |||||||| |||||||||||||||| |||||||| |||      
T  2316421 tttgagggaattcaactactttaaaggtgaattctattgtttgaattcacctcaaagtagttgaattctctcaaaacattacattccctcaaaacatttt 2316520  T
Q  517 ctcatccaaacacactct 534  Q
    | ||||||||||||||||    
T  2316521 c-catccaaacacactct 2316537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 37722889 - 37722964
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||||||| || ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  37722889 gaattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaatattcccccatccaaacacactct 37722964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 414 - 534
Target Start/End: Complemental strand, 9764459 - 9764338
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| ||||||| ||| |    | |||| ||||| ||| || |||||||||||||||||||||| || ||||||||||    
T  9764459 aatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctcaaaata 9764360  T
Q  513 ttccctcatccaaacacactct 534  Q
    ||||| ||||||||||||||||    
T  9764359 ttcccccatccaaacacactct 9764338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 414 - 534
Target Start/End: Original strand, 15373998 - 15374119
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| ||||||||||| |    | |||| ||||| | | || ||||||||||||||||||||||||| |||||||| |    
T  15373998 aatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttagagtagttgaattccctcaaaacattacattccctcaaaaca 15374097  T
Q  513 ttccctcatccaaacacactct 534  Q
    ||||| ||||||||||||||||    
T  15374098 ttcccccatccaaacacactct 15374119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 390 - 534
Target Start/End: Original strand, 40643832 - 40643976
Alignment:
Q  390 ccttagagtatgtttggatgggggaatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctc 488  Q
    ||||| ||| ||||||||||| | |||| ||||||||||||||||||||| ||| | ||||| |    | |||| ||||| ||| || ||||||||||||    
T  40643832 ccttatagtgtgtttggatggagaaatgttttgagggaattcaactactttgagttaaattcaaacaatagaattcaccttaaa-tagttgaattccctc 40643930  T
Q  489 aaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||||||| |||||||| |||||| ||||||||||||||||    
T  40643931 aaaacattacattccctcaaaacattcccccatccaaacacactct 40643976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 414 - 534
Target Start/End: Complemental strand, 40809462 - 40809341
Alignment:
Q  414 aatgctttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| |||||| ||||||| |||||| | |||||||| |||||||||||| || |||||| || ||||||||||||||||||||| |||  ||||||| |    
T  40809462 aatgttttgagtgaattcagctactttaaggtgaattttattgtttgaattcaactcaaagtagttgaattccctcaaaacattatattctctcaaaaca 40809363  T
Q  513 ttccctcatccaaacacactct 534  Q
    || || ||||||||||||||||    
T  40809362 tttccccatccaaacacactct 40809341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 414 - 532
Target Start/End: Complemental strand, 32390093 - 32389974
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| ||||||||||| | |  | |||| ||||| | | || |||||||||||||||| |||||||| | |||||| |    
T  32390093 aatgttttgagggaattcaactactttgaggtgaattcaaataatagaattcaccttagagtagttgaattccctcaaaatattacattccttcaaaaca 32389994  T
Q  513 ttccctcatccaaacacact 532  Q
    ||||||||||||||||||||    
T  32389993 ttccctcatccaaacacact 32389974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 414 - 496
Target Start/End: Complemental strand, 40643938 - 40643856
Alignment:
Q  414 aatgctttgagggaattcaactacttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacatt 496  Q
    |||| |||||||||||||||||| || ||||||||||||||||||||||  | |||||| || ||||||||||||||||||||    
T  40643938 aatgttttgagggaattcaactatttaaggtgaattctattgtttgaatttaactcaaagtagttgaattccctcaaaacatt 40643856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 421 - 533
Target Start/End: Original strand, 20523178 - 20523291
Alignment:
Q  421 tgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctc 519  Q
    ||||||||||||||||||| ||||||||||| |    | |||| ||||| ||| || |||||||||||||||||||||||||  ||||||| |||||| |    
T  20523178 tgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattctctcaaaacattccccc 20523277  T
Q  520 atccaaacacactc 533  Q
    ||||||||||||||    
T  20523278 atccaaacacactc 20523291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 464 - 532
Target Start/End: Original strand, 2721560 - 2721628
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    ||||||||| || ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  2721560 cacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 2721628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 456 - 536
Target Start/End: Complemental strand, 15804400 - 15804320
Alignment:
Q  456 tttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactctca 536  Q
    ||||||| || |||||| || |||||||||||||||||| |||||| |||||||| |||||| ||||||||||||||||||    
T  15804400 tttgaattcaactcaaagtagttgaattccctcaaaacactacattccctcaaaacattcccccatccaaacacactctca 15804320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 40090409 - 40090484
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||||||| || ||||||||| ||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  40090409 gaattcacctcaaagtatttgaattccatcaaaacattacatttcctcaaaacattcccccatccaaacacactct 40090484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 394 - 459
Target Start/End: Original strand, 22305112 - 22305178
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttg 459  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||    
T  22305112 agagtgtgtttggatgggggaatgttttgagggaattcaactactttgaggtgaattccattgtttg 22305178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 414 - 534
Target Start/End: Original strand, 32470920 - 32471039
Alignment:
Q  414 aatgctttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||| |||||||||||| || | ||| ||||||||| ||||||| || |||||| || ||||||||||||||||||||||||| ||||  || |    
T  32470920 aatgttttgaaggaattcaactattttaaggtaaattctattatttgaattcaactcaaagtagttgaattccctcaaaacattacattccctc--aaga 32471017  T
Q  513 ttccctcatccaaacacactct 534  Q
    || || ||||||||||||||||    
T  32471018 tttccacatccaaacacactct 32471039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 441 - 530
Target Start/End: Complemental strand, 16515097 - 16515009
Alignment:
Q  441 aggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 530  Q
    ||||||||||||||||| |||| |||||||||  | ||||||||||||||||| ||||||| |||||||| |||| | ||||||||||||    
T  16515097 aggtgaattctattgttagaattcacctcaaagaagttgaattccctcaaaaccttacattccctcaaaacattctc-catccaaacaca 16515009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 414 - 534
Target Start/End: Original strand, 23092000 - 23092121
Alignment:
Q  414 aatgctttgagggaattcaactacttgaggt-gaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||| ||||||||||||||| | || |||||||||| | ||||| || || ||| || ||||| |||||||||||||||||||   |||||| |    
T  23092000 aatgttttgaaggaattcaactactttaagttgaattctattttctgaattcatctgaaagtagttgaactccctcaaaacattacattcgttcaaaaca 23092099  T
Q  513 ttccctcatccaaacacactct 534  Q
    ||||| ||||||||||||||||    
T  23092100 ttcccccatccaaacacactct 23092121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 391 - 459
Target Start/End: Original strand, 33146188 - 33146257
Alignment:
Q  391 cttagagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttg 459  Q
    |||||||| |||||||||||||||||| ||||||||||||||| ||| ||||||||||||| ||||||||    
T  33146188 cttagagtgtgtttggatgggggaatgttttgagggaattcaaatactttgaggtgaattccattgtttg 33146257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 16515102 - 16515177
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||||||||  | ||||||||||||||||||||||||| ||| |||| |||| ||||||||||||||||||    
T  16515102 gaattcacctcaaagaagttgaattccctcaaaacattacattccctaaaaacattctctcatccaaacacactct 16515177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 22767027 - 22766952
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||| ||| || ||||||||||||||||||||| ||| |||||||| |||||| ||||||||||||||||    
T  22767027 gaattcaccttaaagtatttgaattccctcaaaacattatattccctcaaaacattcccccatccaaacacactct 22766952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 25935285 - 25935360
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||||||| || ||||||| ||||| ||||||||||| |||||||| |||||| ||||||||||||||||    
T  25935285 gaattcacctcaaagtatttgaatttcctcataacattacattccctcaaaacattcccccatccaaacacactct 25935360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 26281264 - 26281339
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||| ||| || ||||||||||||||||||||||||| ||||||||  ||||| ||||||||||||||||    
T  26281264 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacgttcccccatccaaacacactct 26281339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 414 - 534
Target Start/End: Complemental strand, 2316500 - 2316378
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaa-taattgaattccctcaaaacattacattgcctcaaaat 511  Q
    |||| |||||| |||||||||||||| ||||||||||| |    | |||| |||||  ||| || |||||||||||||||| |||||||| ||||||||     
T  2316500 aatgttttgagagaattcaactactttgaggtgaattcaaacaatagaattcacctttaaagtagttgaattccctcaaaatattacattccctcaaaac 2316401  T
Q  512 attccctcatccaaacacactct 534  Q
    |||||| ||||||||||||||||    
T  2316400 attcccccatccaaacacactct 2316378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 459 - 533
Target Start/End: Complemental strand, 3563352 - 3563278
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 533  Q
    |||| ||||| ||| || ||||||||||||||||||||||||| |||||||| ||||||  ||||||||||||||    
T  3563352 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccctatccaaacacactc 3563278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 464 - 534
Target Start/End: Original strand, 22303870 - 22303940
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||  || ||||||||| ||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  22303870 cacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactct 22303940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 394 - 462
Target Start/End: Complemental strand, 15270906 - 15270837
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttgaat 462  Q
    ||||| ||||||||||| |||||| ||||||||||||||| ||| ||||||||||||| |||||||||||    
T  15270906 agagtgtgtttggatggaggaatgttttgagggaattcaaatactttgaggtgaattccattgtttgaat 15270837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 479 - 532
Target Start/End: Complemental strand, 28828422 - 28828369
Alignment:
Q  479 gaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  28828422 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 28828369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 414 - 534
Target Start/End: Complemental strand, 32471003 - 32470882
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| ||| ||||||| | |  | ||||  |||| |||||| ||||||||| ||||||||||||||| |||||||| |    
T  32471003 aatgttttgagggaattcaactactttgagttgaattcaaataatagaatttaccttaaaatagttgaattccttcaaaacattacattccctcaaaaca 32470904  T
Q  513 ttccctcatccaaacacactct 534  Q
    || |  |||||||| |||||||    
T  32470903 tttctccatccaaatacactct 32470882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 394 - 449
Target Start/End: Original strand, 2550328 - 2550384
Alignment:
Q  394 agagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaatt 449  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  2550328 agagtgtgtttggatgggggaatgttttgagggaattcaactactttgaggtgaatt 2550384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 464 - 532
Target Start/End: Original strand, 19533907 - 19533975
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    ||||||||| || ||||||||||||| ||||||||||| |||||||| |||||  ||||||||||||||    
T  19533907 cacctcaaagtatttgaattccctcataacattacattccctcaaaacattcctccatccaaacacact 19533975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 927377 - 927302
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||| |||| || |||||||||||||||||| |||||| |||||||| ||| || ||||||||||||||||    
T  927377 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttccccatccaaacacactct 927302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 485 - 532
Target Start/End: Original strand, 13243514 - 13243561
Alignment:
Q  485 cctcaaaacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  13243514 cctcaaaacattacattacctcaaaatattcccccatccaaacacact 13243561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 41762210 - 41762285
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| |||| |||| || ||||||||||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  41762210 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 41762285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 479 - 534
Target Start/End: Complemental strand, 13243514 - 13243457
Alignment:
Q  479 gaattccctcaaaacattacattgcctcaaaatattccctcatc--caaacacactct 534  Q
    ||||||||||||||||||||||| |||||||| |||||||||||  ||||||||||||    
T  13243514 gaattccctcaaaacattacattccctcaaaacattccctcatccacaaacacactct 13243457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 402 - 462
Target Start/End: Complemental strand, 17542405 - 17542344
Alignment:
Q  402 tttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttgaat 462  Q
    |||||||||| ||||| ||||||||||||||| ||| ||||||||||||| |||||||||||    
T  17542405 tttggatgggagaatgttttgagggaattcaaatactttgaggtgaattccattgtttgaat 17542344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 534
Target Start/End: Complemental strand, 23092019 - 23091963
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||| ||||||||||||||| ||||||||||||||| |||| |||||||||||    
T  23092019 ttgaattccttcaaaacattacattccctcaaaatattccc-catcaaaacacactct 23091963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 534
Target Start/End: Original strand, 32250111 - 32250167
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||||||||||||||||||| || |||||||| |||||| ||||||||||||||||    
T  32250111 ttgaattccctcaaaacattactttccctcaaaacattccc-catccaaacacactct 32250167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 534
Target Start/End: Complemental strand, 35379400 - 35379344
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||||||||||||||||||||||  ||||||| |||||| ||||||||||||||||    
T  35379400 ttgaattccctcaaaacattacattatctcaaaacattccc-catccaaacacactct 35379344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 480 - 532
Target Start/End: Original strand, 15804399 - 15804451
Alignment:
Q  480 aattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    |||||||||||||||||||||| |||||||| ||| || ||||||||||||||    
T  15804399 aattccctcaaaacattacattccctcaaaacatttccccatccaaacacact 15804451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 464 - 532
Target Start/End: Original strand, 37145501 - 37145569
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    ||||||||| || |||||||| |||| ||||||||||| |||||||| |||||| ||||||||| ||||    
T  37145501 cacctcaaagtatttgaattctctcataacattacattccctcaaaacattcccccatccaaacccact 37145569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 9894317 - 9894388
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacaca 530  Q
    |||| ||||||||| || |||||||||||   ||||||||||| |||||||| |||||| ||||||||||||    
T  9894317 gaattcacctcaaagtatttgaattccctggtaacattacattccctcaaaacattcccccatccaaacaca 9894388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 391 - 433
Target Start/End: Original strand, 33146058 - 33146100
Alignment:
Q  391 cttagagtatgtttggatgggggaatgctttgagggaattcaa 433  Q
    |||||||| |||||||||||||||||| |||||||||||||||    
T  33146058 cttagagtgtgtttggatgggggaatgttttgagggaattcaa 33146100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 439
Target Start/End: Original strand, 22302535 - 22302584
Alignment:
Q  390 ccttagagtatgtttggatgggggaatgctttgagggaattcaactactt 439  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||| |||||    
T  22302535 ccttagagtgtgtttggatggggtaatgttttgagggaattcaaatactt 22302584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 391 - 459
Target Start/End: Original strand, 28490008 - 28490076
Alignment:
Q  391 cttagagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttg 459  Q
    |||| ||| ||||||||||||||| || ||||||||||||||| ||| ||||||||||||| ||||||||    
T  28490008 cttaaagtgtgtttggatggggga-tgttttgagggaattcaaatactttgaggtgaattccattgtttg 28490076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 477 - 534
Target Start/End: Complemental strand, 34982272 - 34982216
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||||||||||||| ||||| |||||||| ||||||  |||||||||||||||    
T  34982272 ttgaattccctcaaaacat-acattccctcaaaacattcccctatccaaacacactct 34982216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 533
Target Start/End: Original strand, 33245385 - 33245441
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 533  Q
    |||||||  |||||||||||||||| | |||||| |||||| |||||||||||||||    
T  33245385 ttgaattttctcaaaacattacattccatcaaaacattcccccatccaaacacactc 33245441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 391 - 439
Target Start/End: Complemental strand, 34982351 - 34982303
Alignment:
Q  391 cttagagtatgtttggatgggggaatgctttgagggaattcaactactt 439  Q
    |||||||| ||||||||||| |||||| |||||||||||||||| ||||    
T  34982351 cttagagtgtgtttggatggaggaatgttttgagggaattcaaccactt 34982303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 429
Target Start/End: Complemental strand, 22303944 - 22303905
Alignment:
Q  390 ccttagagtatgtttggatgggggaatgctttgagggaat 429  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  22303944 ccttagagtgtgtttggatgggggaatgttttgagggaat 22303905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 458
Target Start/End: Original strand, 28489487 - 28489546
Alignment:
Q  400 tgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgttt 458  Q
    |||||||||||||||||  |||||| |||||||| ||| ||||||||||||| |||||||    
T  28489487 tgtttggatgggggaatattttgagagaattcaaatactttgaggtgaattccattgttt 28489546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 470 - 516
Target Start/End: Complemental strand, 8255091 - 8255045
Alignment:
Q  470 aaaataattgaattccctcaaaacattacattgcctcaaaatattcc 516  Q
    |||||| ||||||||||||||||||||||||| ||| ||| ||||||    
T  8255091 aaaatatttgaattccctcaaaacattacattaccttaaagtattcc 8255045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 534
Target Start/End: Complemental strand, 11601109 - 11601040
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||||||| || ||||||||| ||||||||||| ||| ||| |||||||| | |||| ||||||||||||    
T  11601109 cacctcaaattatttgaattccttcaaaacattatattaccttaaaatatt-catcattcaaacacactct 11601040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 462
Target Start/End: Original strand, 3563315 - 3563364
Alignment:
Q  414 aatgctttgagggaattcaactac-ttgaggtgaattctattgtttgaat 462  Q
    |||| ||||||||||||||||||| || ||||||||||||||| ||||||    
T  3563315 aatgttttgagggaattcaactactttaaggtgaattctattgcttgaat 3563364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 459
Target Start/End: Complemental strand, 12064519 - 12064454
Alignment:
Q  395 gagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttg 459  Q
    |||| ||||| |||||||||||| |||||||||||| || ||| ||||||||||||  ||||||||    
T  12064519 gagtgtgttttgatgggggaatgttttgagggaatttaaatactttgaggtgaatttcattgtttg 12064454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 526
Target Start/End: Original strand, 12991333 - 12991374
Alignment:
Q  485 cctcaaaacattacattgcctcaaaatattccctcatccaaa 526  Q
    |||||||||||||| || |||||||| |||||||||||||||    
T  12991333 cctcaaaacattactttacctcaaaacattccctcatccaaa 12991374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 429
Target Start/End: Original strand, 22766950 - 22766987
Alignment:
Q  392 ttagagtatgtttggatgggggaatgctttgagggaat 429  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  22766950 ttagagtgtgtttggatgggggaatgttttgagggaat 22766987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 534
Target Start/End: Original strand, 40809379 - 40809500
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| ||| ||||||| |    |  ||| ||||| ||| ||  ||||||| ||||||||||||||||  ||||||| |    
T  40809379 aatgttttgagggaattcaactactttgagttgaattcaaacaataaaattcaccttaaagtagctgaattcactcaaaacattacattctctcaaaaca 40809478  T
Q  513 ttccctcatccaaacacactct 534  Q
    || || |||| |||||||||||    
T  40809479 tttccccatctaaacacactct 40809500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 459 - 531
Target Start/End: Original strand, 6634098 - 6634170
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacac 531  Q
    |||| ||||||||| || ||||| ||| | |||| |||||||| |||| |||| ||||| |||||||||||||    
T  6634098 gaattcacctcaaagtagttgaactcctttaaaatattacattccctcgaaatgttcccccatccaaacacac 6634170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 464 - 532
Target Start/End: Complemental strand, 14834894 - 14834826
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    ||||||||| || ||| ||||||| ||||||||||||| |||| ||| |||| | ||| ||||||||||    
T  14834894 cacctcaaagtatttggattcccttaaaacattacattccctcgaaacattctcccatgcaaacacact 14834826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 76; Significance: 9e-35; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 414 - 532
Target Start/End: Original strand, 443 - 562
Alignment:
Q  414 aatgctttgagggaattcaactacttgagg-tgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||||||  ||||||||| || ||||||||||||||||||||||||| |||||||| |    
T  443 aatgttttgagggaattcaactacttcagggtgaattctattgtttgaactcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 542  T
Q  513 ttccctcatccaaacacact 532  Q
    ||||| ||||||||||||||    
T  543 ttcccccatccaaacacact 562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 477 - 534
Target Start/End: Complemental strand, 462 - 405
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||||||||||||||||||  || ||||||||||||||| ||||||||||||||||    
T  462 ttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 76; Significance: 9e-35; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 414 - 532
Target Start/End: Complemental strand, 2150 - 2031
Alignment:
Q  414 aatgctttgagggaattcaactacttgagg-tgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaata 512  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||||||  ||||||||| || ||||||||||||||||||||||||| |||||||| |    
T  2150 aatgttttgagggaattcaactacttcagggtgaattctattgtttgaactcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 2051  T
Q  513 ttccctcatccaaacacact 532  Q
    ||||| ||||||||||||||    
T  2050 ttcccccatccaaacacact 2031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 477 - 534
Target Start/End: Original strand, 2131 - 2188
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||||||||||||||||||  || ||||||||||||||| ||||||||||||||||    
T  2131 ttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 2188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 558 - 651
Target Start/End: Complemental strand, 4286 - 4190
Alignment:
Q  558 aaaagaaatggtatatataaat---ctcattactcccattatgatcgactacagctaccacatttctcatttcttctcctccctcaccatggctatc 651  Q
    |||| |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4286 aaaaaaaatggtatatataaattccctcattactcccattatgatcgactacagctaccacatttctcatttcttctcttccctcaccatggctatc 4190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 414 - 501
Target Start/End: Complemental strand, 56395 - 56307
Alignment:
Q  414 aatgctttgagggaattcaactacttga-ggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacatt 501  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||||  ||||||||| || |||||||||||||||||||||||||    
T  56395 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaagtagttgaattccctcaaaacattacatt 56307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 394 - 530
Target Start/End: Original strand, 56287 - 56429
Alignment:
Q  394 agagtatgtttggatgggggaatgc-----tttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattccct 487  Q
    ||||| ||||||||||||||||||      ||||||||||||||||||||| ||||||| ||| |    | |||| ||||| ||| || |||||||||||    
T  56287 agagtgtgtttggatgggggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtagttgaattccct 56386  T
Q  488 caaaacattacattgcctcaaaatattccctcatccaaacaca 530  Q
    ||||||||||| || ||||||||||||||||||||||||||||    
T  56387 caaaacattactttccctcaaaatattccctcatccaaacaca 56429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 459 - 533
Target Start/End: Original strand, 4496 - 4570
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 533  Q
    |||| |||| ||||||| ||||||| ||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  4496 gaattcaccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacactc 4570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 459 - 533
Target Start/End: Original strand, 5140 - 5214
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 533  Q
    |||| |||| ||||||| ||||||| ||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  5140 gaattcaccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacactc 5214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 391 - 472
Target Start/End: Complemental strand, 17643 - 17561
Alignment:
Q  391 cttagagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttgaatccacctcaaa 472  Q
    |||||||| |||||||||||||||||| ||||||||||||||||| | |||||||| ||| |||||||||  |||||||||||    
T  17643 cttagagtgtgtttggatgggggaatgttttgagggaattcaactcctttgaggtgcattttattgtttggttccacctcaaa 17561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 46; Significance: 7e-17; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 459 - 532
Target Start/End: Complemental strand, 19272 - 19200
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    |||| |||||||||||| ||||||||| ||||||||||||||| |||||||||| |||| ||||||||||||||    
T  19272 gaattcacctcaaaatatttgaattcc-tcaaaacattacattccctcaaaatactcccccatccaaacacact 19200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 464 - 532
Target Start/End: Original strand, 19788 - 19855
Alignment:
Q  464 cacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    ||||||||| || |||||||  || ||||||||||||| |||||||| | |||| ||||||||||||||    
T  19788 cacctcaaagtatttgaattttcttaaaacattacattccctcaaaaca-tcccccatccaaacacact 19855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 4150 - 4075
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||||||| || |||||||||||||||||||||||||  ||||||| ||||| | |||||||||||||||    
T  4150 gaattcacctcaaagtatttgaattccctcaaaacattacattctctcaaaacattcctttatccaaacacactct 4075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 414 - 459
Target Start/End: Original strand, 4113 - 4159
Alignment:
Q  414 aatgctttgagggaattcaactactt-gaggtgaattctattgtttg 459  Q
    |||| ||||||||||||||| ||||| ||||||||||||||||||||    
T  4113 aatgttttgagggaattcaaatactttgaggtgaattctattgtttg 4159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 42072 - 41997
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||| ||||||||| || ||||||||||||||||||||||||| |||||||| |||||  ||| ||||||||||||    
T  42072 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacacactct 41997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 534
Target Start/End: Original strand, 42080 - 42137
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    |||||||| |||||||||||||||| ||||||||  ||||| ||||||||||||||||    
T  42080 ttgaattctctcaaaacattacattccctcaaaacgttcccccatccaaacacactct 42137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 454
Target Start/End: Original strand, 42035 - 42076
Alignment:
Q  414 aatgctttgagggaattcaactac-ttgaggtgaattctatt 454  Q
    |||| ||||||||||||||||||| |||||||||||||||||    
T  42035 aatgttttgagggaattcaactactttgaggtgaattctatt 42076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 459 - 532
Target Start/End: Complemental strand, 83018 - 82945
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    |||| ||||| ||| || ||||||||||||||||||||||||| |||||||| |||| | ||||||||||||||    
T  83018 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcacccatccaaacacact 82945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 414 - 457
Target Start/End: Original strand, 82981 - 83025
Alignment:
Q  414 aatgctttgagggaattcaactac-ttgaggtgaattctattgtt 457  Q
    |||| ||||||||||||||||||| || |||||||||||||||||    
T  82981 aatgttttgagggaattcaactactttaaggtgaattctattgtt 83025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 392 - 459
Target Start/End: Original strand, 109047 - 109115
Alignment:
Q  392 ttagagtatgtttggatgggggaatgctttgagggaattcaactac-ttgaggtgaattctattgtttg 459  Q
    ||||||| |||||||||||||||||| |||||||||||| || ||| |||| |||||||| ||||||||    
T  109047 ttagagtgtgtttggatgggggaatgttttgagggaatttaaatactttgatgtgaattccattgtttg 109115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 471 - 534
Target Start/End: Complemental strand, 2930 - 2867
Alignment:
Q  471 aaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactct 534  Q
    ||||| |||||||||||||||||||||||||  ||| ||| |||||| |||| |||||||||||    
T  2930 aaatatttgaattccctcaaaacattacattctctcgaaacattcccccatctaaacacactct 2867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 459
Target Start/End: Original strand, 2905 - 2950
Alignment:
Q  414 aatgctttgagggaattcaactacttgaggtgaattctattgtttg 459  Q
    |||| ||||||||||||||| || ||||||||||||| ||||||||    
T  2905 aatgttttgagggaattcaaatatttgaggtgaattccattgtttg 2950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 477 - 532
Target Start/End: Complemental strand, 7208 - 7153
Alignment:
Q  477 ttgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacact 532  Q
    ||||||||||| |||||| |||||| |||||||| |||||  ||||||||||||||    
T  7208 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 7153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 459 - 533
Target Start/End: Complemental strand, 10961 - 10887
Alignment:
Q  459 gaatccacctcaaaataattgaattccctcaaaacattacattgcctcaaaatattccctcatccaaacacactc 533  Q
    |||| ||| ||||| || ||||||||||||||||||||||||| ||| |||| ||||   ||| |||||||||||    
T  10961 gaattcacgtcaaagtatttgaattccctcaaaacattacattcccttaaaacattcttccattcaaacacactc 10887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University