View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18818_low_9 (Length: 276)
Name: NF18818_low_9
Description: NF18818
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18818_low_9 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 27300189 - 27299914
Alignment:
| Q |
1 |
gctgaataaaacaaggttaatattttggaagtttttatttctttgcagaaattagaaaaacttgtaaatagcataatgcattaatgtcatggcctaagtg |
100 |
Q |
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| T |
27300189 |
gctgaataaaacaaggttaatattttggaagtttttatttctttgcagaaattagaaaaacttgtaaatagcataatgcattaatgtcatggcctaagtg |
27300090 |
T |
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| Q |
101 |
agactaaaaacaaacttttaaatagacctttttgtgttttaagtaagagaacgataggattaaactttttactagcatgtgaggtttcattatttcttaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27300089 |
agactaaaaacaaacttttaaatagacctttttgtgttttaagtaagagaacgataggattaaactttttactagcatgtgaggtttcattatttcttaa |
27299990 |
T |
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| Q |
201 |
aatacgttattaactaatactagagatgtcctataataagttaatgacataatagtatagttgtcctatgtgagtg |
276 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27299989 |
aatacgttattaactaatactagagatgtcctataataagttaatgacataatagtatagttgtcctatgtgagtg |
27299914 |
T |
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