View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18819_low_57 (Length: 211)
Name: NF18819_low_57
Description: NF18819
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18819_low_57 |
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Alignment Details
Target: chr4 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 18 - 192
Target Start/End: Complemental strand, 30443837 - 30443663
Alignment:
| Q |
18 |
tcaagctattactacaaagataccagccttctattttgtgtatgtttcaactaagttgtccttattttcttaattctgcttgtttcaacaaatttcactg |
117 |
Q |
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| T |
30443837 |
tcaagctattactacaaagataccagccttctattttgtgtatgtttcaactaagttgtccttattttcttaattctgcttgtttcaacaaatttcactg |
30443738 |
T |
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| Q |
118 |
attttcttttctacgctataggtgcggattgcccaaggtcttgtacatttgggaaagggacttttaacacttaat |
192 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30443737 |
attttcttttctacgctataggtgcggattgcccaaggtcttgtacatttgggaaagggacttttaacacttaat |
30443663 |
T |
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