View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1881_low_5 (Length: 261)
Name: NF1881_low_5
Description: NF1881
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1881_low_5 |
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Alignment Details
Target: chr6 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 9830258 - 9830011
Alignment:
| Q |
1 |
ggtaacagtcaataccatgatatggttgg-ccatctttaattttagtagtgtaagcaactcaacacaagttttcttcaactaaaatttttgctttcatta |
99 |
Q |
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| T |
9830258 |
ggtaacagtcaataccatgatatggttgggccatctttaattttagtagtggaagcaactcaacacaagttttcttcaactaaaatttttgctttcatta |
9830159 |
T |
|
| Q |
100 |
catttgagccaaatgttacttgacaaggccttattttgttgcaataaggacctataaattaattagaagtgttttacgggttgttcttgcggaaaggttt |
199 |
Q |
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|||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9830158 |
catttgagccaaattttacttgacaatgccttattttgttgcaataaggacctataaattaattagaagtgttttacgggttgttcttgcggaaaggttt |
9830059 |
T |
|
| Q |
200 |
gactcaacaaacaaaggtttaaaagtatttaggtttaatgtccaatac |
247 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9830058 |
gactcaacaaacaaaggtttaaaagtatttaggtttaatgtccaatac |
9830011 |
T |
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