View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18823_low_1 (Length: 695)

Name: NF18823_low_1
Description: NF18823
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18823_low_1
NF18823_low_1
[»] chr5 (12 HSPs)
chr5 (19-687)||(8948455-8949120)
chr5 (484-687)||(16668628-16668830)
chr5 (496-591)||(18465485-18465580)
chr5 (452-570)||(28070103-28070220)
chr5 (484-570)||(13362799-13362885)
chr5 (485-570)||(23335657-23335742)
chr5 (483-570)||(2827017-2827104)
chr5 (451-551)||(34329124-34329223)
chr5 (484-558)||(25017179-25017253)
chr5 (484-547)||(33868185-33868248)
chr5 (484-525)||(42512228-42512269)
chr5 (484-520)||(37456710-37456746)
[»] chr6 (9 HSPs)
chr6 (454-687)||(29157226-29157456)
chr6 (483-687)||(18611217-18611420)
chr6 (485-570)||(24737641-24737726)
chr6 (454-554)||(34399641-34399740)
chr6 (454-570)||(33346321-33346436)
chr6 (453-591)||(15034900-15035041)
chr6 (496-570)||(877249-877323)
chr6 (484-530)||(35119264-35119310)
chr6 (484-520)||(7089112-7089148)
[»] chr2 (12 HSPs)
chr2 (497-687)||(4281622-4281811)
chr2 (496-687)||(25995328-25995511)
chr2 (454-570)||(18298061-18298176)
chr2 (448-570)||(20709768-20709889)
chr2 (454-570)||(25192892-25193007)
chr2 (496-551)||(14551288-14551343)
chr2 (484-551)||(4579787-4579854)
chr2 (513-574)||(43822412-43822473)
chr2 (484-547)||(5098746-5098809)
chr2 (484-545)||(36636912-36636973)
chr2 (484-520)||(1292179-1292215)
chr2 (484-520)||(9143615-9143651)
[»] chr1 (14 HSPs)
chr1 (454-687)||(16115851-16116083)
chr1 (484-604)||(35198097-35198217)
chr1 (484-591)||(37639371-37639478)
chr1 (454-570)||(18056784-18056899)
chr1 (454-570)||(22348039-22348154)
chr1 (496-570)||(23320035-23320109)
chr1 (496-570)||(179649-179723)
chr1 (496-570)||(30802437-30802511)
chr1 (484-570)||(45889625-45889711)
chr1 (496-570)||(8402261-8402335)
chr1 (621-687)||(35198002-35198068)
chr1 (484-520)||(11421624-11421660)
chr1 (484-520)||(34369690-34369726)
chr1 (483-547)||(51420374-51420437)
[»] chr4 (15 HSPs)
chr4 (527-687)||(48077699-48077857)
chr4 (485-591)||(50563658-50563764)
chr4 (454-570)||(27764240-27764355)
chr4 (484-570)||(4168387-4168473)
chr4 (483-570)||(637882-637969)
chr4 (484-570)||(22181195-22181281)
chr4 (484-570)||(26447362-26447448)
chr4 (484-570)||(36621651-36621737)
chr4 (454-570)||(45255975-45256090)
chr4 (484-570)||(38485624-38485710)
chr4 (496-570)||(51837041-51837115)
chr4 (454-570)||(21097140-21097255)
chr4 (496-545)||(6386516-6386565)
chr4 (483-531)||(1729604-1729652)
chr4 (456-520)||(29826606-29826669)
[»] chr8 (13 HSPs)
chr8 (484-687)||(15181820-15182028)
chr8 (454-570)||(32987395-32987510)
chr8 (454-570)||(39021975-39022090)
chr8 (454-570)||(7058114-7058229)
chr8 (484-570)||(4836651-4836737)
chr8 (484-570)||(4842096-4842182)
chr8 (484-570)||(7614097-7614183)
chr8 (484-570)||(8550533-8550619)
chr8 (484-570)||(15260801-15260887)
chr8 (454-551)||(1208709-1208805)
chr8 (531-570)||(2750101-2750140)
chr8 (502-543)||(1671850-1671891)
chr8 (484-520)||(41451135-41451171)
[»] chr7 (16 HSPs)
chr7 (484-591)||(5757416-5757523)
chr7 (483-591)||(32090606-32090714)
chr7 (484-570)||(46573450-46573536)
chr7 (454-570)||(30428873-30428988)
chr7 (616-687)||(32090759-32090830)
chr7 (490-570)||(33797966-33798046)
chr7 (454-570)||(46024027-46024142)
chr7 (454-570)||(15974886-15975001)
chr7 (484-551)||(28396751-28396818)
chr7 (454-554)||(12279641-12279740)
chr7 (454-554)||(12279745-12279844)
chr7 (484-551)||(48690924-48690991)
chr7 (496-551)||(48691033-48691088)
chr7 (484-546)||(48305265-48305327)
chr7 (484-545)||(44141226-44141287)
chr7 (615-648)||(5757566-5757599)
[»] chr3 (18 HSPs)
chr3 (456-570)||(50754008-50754121)
chr3 (484-570)||(52987600-52987686)
chr3 (454-570)||(51362388-51362503)
chr3 (496-591)||(23699369-23699464)
chr3 (496-591)||(23717824-23717919)
chr3 (496-591)||(23736280-23736375)
chr3 (454-570)||(8718101-8718216)
chr3 (454-570)||(9069988-9070103)
chr3 (470-570)||(16277364-16277463)
chr3 (453-570)||(19385265-19385381)
chr3 (615-687)||(23755458-23755530)
chr3 (615-682)||(23699507-23699574)
chr3 (615-682)||(23717962-23718029)
chr3 (615-682)||(23736418-23736485)
chr3 (484-570)||(39099226-39099312)
chr3 (484-570)||(7045250-7045336)
chr3 (527-591)||(23755351-23755415)
chr3 (496-554)||(17627197-17627255)
[»] scaffold0097 (1 HSPs)
scaffold0097 (448-570)||(13607-13728)
[»] scaffold0238 (1 HSPs)
scaffold0238 (454-570)||(25182-25297)
[»] scaffold0194 (1 HSPs)
scaffold0194 (484-570)||(27636-27722)
[»] scaffold0337 (1 HSPs)
scaffold0337 (483-554)||(7045-7116)
[»] scaffold0544 (1 HSPs)
scaffold0544 (455-553)||(10642-10739)


Alignment Details
Target: chr5 (Bit Score: 495; Significance: 0; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 495; E-Value: 0
Query Start/End: Original strand, 19 - 687
Target Start/End: Original strand, 8948455 - 8949120
Alignment:
Q  19 tttcaacattcgtaacataatgttaaagtactaagtatttctggatgtgtaaagtttaaatataatgtcaaagtactaagtatttcgatgtacttggtat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8948455 tttcaacattcgtaacataatgttaaagtacaaagtatttctggatgtgtaaagtttaaatataatgtcaaagtactaagtatttcgatgtacttagtat 8948554  T
Q  119 tcatcgaaatggtatgtgtatactaagtttaaactcatacagagttgtggac---------gtagatcccaaaatcgaattgatctcaatacaacaataa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||    
T  8948555 tcatcgaaatggtatgtgtatactaagtttaaactcatacagagttgtggaccattttacagtagatcccaaaatcgaattgatctcaatacaacaataa 8948654  T
Q  210 aggttcacatattcataataatgcaaacaataccaaatggtttggttttagttgccaaataacatgcataaattcgtccaacacggtcattaatgattgc 309  Q
    ||||||||||||||||||   ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8948655 aggttcacatattcataa---tgcaaacgataccaaatggtttggttttagttgccaaataacatgcataaattcgtccaacacggtcattaatgattgc 8948751  T
Q  310 tctaaacaagacatgacgggggacaataatgagaagcaaatgattttgaattatgttttaaaagtttactttctcatgtcctttttgtttcctacttgct 409  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8948752 tctaaacaagacatgacgggggacaataatgagaagcaaatgattttgaattatgttttaaaagtttactttctcatgtcctttttgtttcctacttgct 8948851  T
Q  410 ctaaacaagacatgacgtgaaggtccatcaaagacgtgagtggaggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcac 509  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||  |||||  ||||||      |||||||||||||     
T  8948852 ctaaacaagacatgacgtgaaggtccaccaaagacgtgagtggaggcaaaagttatcatgcataatgaaatc--ttatgc-----gcataaacacttcaa 8948944  T
Q  510 aatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaagaggtatatctttattttgacnnnnn 609  Q
    ||  ||||||| |||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||         
T  8948945 aactatcagatttagtgtacacgtg--ataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaagaggtatatcttcattttgacaaaaa 8949042  T
Q  610 nnnntctctcactaaaaatgctttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttcatctc 687  Q
         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8949043 aaaacctctcactaaaaatgctttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttcttctc 8949120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 484 - 687
Target Start/End: Complemental strand, 16668830 - 16668628
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaa 583  Q
    ||||||||| | |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16668830 ttatgcaccctgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaagaataaaggaaa 16668731  T
Q  584 gaggtatatctttattttgacnnnnnnnnntctctcactaaaaatgctttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttca 683  Q
    |||||||||||| ||||||||          ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  16668730 gaggtatatcttcattttgacaaaaaaaac-ctctcactaaaaatgctttgctcacttctctctctaggacattcagaccagcgccaccttatatcttct 16668632  T
Q  684 tctc 687  Q
    ||||    
T  16668631 tctc 16668628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 496 - 591
Target Start/End: Complemental strand, 18465580 - 18465485
Alignment:
Q  496 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaagaggtata 591  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18465580 cataaacacttcacaaccatcagatctagtgtacacgtgtaataatcttagacttctcaaactacaccaaatcaaggaataaaggaaagaggtata 18465485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 452 - 570
Target Start/End: Complemental strand, 28070220 - 28070103
Alignment:
Q  452 gaggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttc 551  Q
    ||||||||||||||  | |||||| ||||| || ||||||||| ||||||||||||||||  |||||||||||| |||||||||||||||||||| ||||    
T  28070220 gaggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacacttcacaactatcagatctagtgtacacgtgtaataatcctagacttc 28070122  T
Q  552 tcaaactacaccaaatcaa 570  Q
    |||||||||||||||||||    
T  28070121 tcaaactacaccaaatcaa 28070103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 484 - 570
Target Start/End: Original strand, 13362799 - 13362885
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    ||||||||||| |||||||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||    
T  13362799 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtatacgtgtaataatcataggcttctcaaactacaccaaatcaa 13362885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 485 - 570
Target Start/End: Complemental strand, 23335742 - 23335657
Alignment:
Q  485 tatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    |||||||||| |||||||| ||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  23335742 tatgcaccgtgcataaacatttcacaaccatcagatctagtgtacacgtgtaataatcataggcttctcaaactacaccaaatcaa 23335657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 483 - 570
Target Start/End: Complemental strand, 2827104 - 2827017
Alignment:
Q  483 tttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    ||||| |||||| ||||||||||| |||| ||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||    
T  2827104 tttatccaccgtgcataaacactttacaaccatcagatctagtgtacacgtgtaattatcttaggcttctcaaactacaccaaatcaa 2827017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 451 - 551
Target Start/End: Original strand, 34329124 - 34329223
Alignment:
Q  451 ggaggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggctt 550  Q
    |||||||||||||||  | |||||| ||||| |||||||||||| |||||||||||||||| ||||||||||||| ||||||  |||||||| |||||||    
T  34329124 ggaggcaaaagttatggtgcataaggaaatc-tttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgaataataatcataggctt 34329222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 484 - 558
Target Start/End: Complemental strand, 25017253 - 25017179
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaact 558  Q
    ||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||  |||| ||||||||||    
T  25017253 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataattttaggtttctcaaact 25017179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 547
Target Start/End: Original strand, 33868185 - 33868248
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctagg 547  Q
    ||||||||| | |||||||||||||||| |||| ||| || | |||| ||||||||||||||||    
T  33868185 ttatgcaccctgcataaacacttcacaaccatctgatttattttacatgtgtaataatcctagg 33868248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 525
Target Start/End: Original strand, 42512228 - 42512269
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagt 525  Q
    |||| |||||| |||||||||||||||| |||||||||||||    
T  42512228 ttatccaccgtgcataaacacttcacaaccatcagatctagt 42512269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 484 - 520
Target Start/End: Original strand, 37456710 - 37456746
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagat 520  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  37456710 ttatgcaccgtacataaacacatcacaaccatcagat 37456746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 138; Significance: 9e-72; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 454 - 687
Target Start/End: Original strand, 29157226 - 29157456
Alignment:
Q  454 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 553  Q
    ||||||||||||| | || ||| ||||| || ||||||||| ||||||||||| |||| ||||||||||||| ||||||||||||||| |||||||||||    
T  29157226 ggcaaaagttatcatgcacaaggaaatcctt-atgcaccgtgcataaacactttacaaccatcagatctagtgtacacgtgtaataatactaggcttctc 29157324  T
Q  554 aaactacaccaaatcaaggaataaaggaaagaggtatatctttattttgacnnnnnnnnntctctcactaaaaatgctttgctcacttctctctctagga 653  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||         |||||||||||||||||||||||||||||||| || ||||    
T  29157325 aaactacaccaaatcaaggaataaaggaaagaggtatatcttcattttgac--aaaaaaatctctcactaaaaatgctttgctcacttctctatccagga 29157422  T
Q  654 cattcaaaccagcgccaccttatatcttcatctc 687  Q
    ||||||||||||||||||||||||||||| ||||    
T  29157423 cattcaaaccagcgccaccttatatcttcttctc 29157456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 483 - 687
Target Start/End: Original strand, 18611217 - 18611420
Alignment:
Q  483 tttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaa 582  Q
    |||||||||  | |||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  18611217 tttatgcactctgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcataggcttctcaaaccacaccaaatcaaggaataaaggaa 18611316  T
Q  583 agaggtatatctttattttgacnnnnnnnnntctctcactaaaaatgctttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttc 682  Q
    ||||||||||||| ||||||||          |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18611317 agaggtatatcttcattttgacaaaaaaaac-ctctcattaaaaatgctttgctcacttctctctctaggacatttaaaccagcgccaccttatatcttc 18611415  T
Q  683 atctc 687  Q
     ||||    
T  18611416 ttctc 18611420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 485 - 570
Target Start/End: Complemental strand, 24737726 - 24737641
Alignment:
Q  485 tatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    |||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  24737726 tatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttcttaaactacaccaaatcaa 24737641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 454 - 554
Target Start/End: Original strand, 34399641 - 34399740
Alignment:
Q  454 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 553  Q
    ||||||||||||  | |||||| ||||| || |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  34399641 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtatataaacacttcacaatcatcagatctagtgtacacgtgtaataatcctaggcttctc 34399739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 454 - 570
Target Start/End: Complemental strand, 33346436 - 33346321
Alignment:
Q  454 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 553  Q
    ||||||||||||  | |||||| ||||| || ||||||||| |||||||||||||||| ||||| ||||||| |||||||||||||||  ||||||||||    
T  33346436 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacacttcacaaccatcaaatctagtgtacacgtgtaataattataggcttctc 33346338  T
Q  554 aaactacaccaaatcaa 570  Q
    |||||||  ||||||||    
T  33346337 aaactacgtcaaatcaa 33346321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 453 - 591
Target Start/End: Complemental strand, 15035041 - 15034900
Alignment:
Q  453 aggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggct--- 549  Q
    |||||||||||||  | |||||| ||||| || ||||||||| ||||||   ||||||| ||||||||||||| |||| ||||||||||| ||||||       
T  15035041 aggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaatcattcacaaccatcagatctagtgtacatgtgtaataatcataggcttct 15034943  T
Q  550 --tctcaaactacaccaaatcaaggaataaaggaaagaggtata 591  Q
      ||||||||||||||||||||||||||||| ||||||||||||    
T  15034942 cctctcaaactacaccaaatcaaggaataaa-gaaagaggtata 15034900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 496 - 570
Target Start/End: Original strand, 877249 - 877323
Alignment:
Q  496 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    |||||||||||||||| ||| |||||  || ||||||| |||||||| || ||||||||||||||||||||||||    
T  877249 cataaacacttcacaaccattagatcaggtgtacacgtataataatcataagcttctcaaactacaccaaatcaa 877323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 484 - 530
Target Start/End: Original strand, 35119264 - 35119310
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtataca 530  Q
    ||||||||||| |||||||||||||||| ||||||||||||| ||||    
T  35119264 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtaca 35119310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 484 - 520
Target Start/End: Original strand, 7089112 - 7089148
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagat 520  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  7089112 ttatgcaccgtgcataaacacatcacaatcatcagat 7089148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 8e-66; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 497 - 687
Target Start/End: Complemental strand, 4281811 - 4281622
Alignment:
Q  497 ataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaagaggtatatcttt 596  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||     
T  4281811 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggtttctcaaactacagcaaatcaaggaataaaggaaagaggtatatcttc 4281712  T
Q  597 attttgacnnnnnnnnntctctcactaaaaatgctttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttcatctc 687  Q
    ||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  4281711 attttgacaaaaaaaac-ctctcactaaaaatgctttgctcacttctctctctaggacattcaaaccagcgtcaccttatatcttcttctc 4281622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 496 - 687
Target Start/End: Original strand, 25995328 - 25995511
Alignment:
Q  496 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaagaggtatatctt 595  Q
    |||||| ||||||||| |||||||| |||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||            
T  25995328 cataaatacttcacaaccatcagatttagtgtacacgtgtaataatcctaggctactcaaattacaccaaatcaaggaataaaggaaatagg-------- 25995419  T
Q  596 tattttgac--nnnnnnnnntctctcactaaaaatgctttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttcatctc 687  Q
      |||||||            |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25995420 --ttttgacaaaaaaaaaaacctctcactaaaaatgctttgttcacttctctctctaggacattcaaaccagcgccaccttatatcttcttctc 25995511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 454 - 570
Target Start/End: Complemental strand, 18298176 - 18298061
Alignment:
Q  454 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 553  Q
    ||||||||||||  | |||||| ||||| || ||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  18298176 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctc 18298078  T
Q  554 aaactacaccaaatcaa 570  Q
    |||||||||||||||||    
T  18298077 aaactacaccaaatcaa 18298061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 448 - 570
Target Start/End: Original strand, 20709768 - 20709889
Alignment:
Q  448 agtggaggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctagg 547  Q
    ||||| ||||||||||||  | |||||| ||||| || || |||||| |||||||||||||||| ||||||||||||| ||||| ||||||||||||| |    
T  20709768 agtggtggcaaaagttatggtgcataaggaaatcctt-atccaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctacg 20709866  T
Q  548 cttctcaaactacaccaaatcaa 570  Q
    |||||||||||||||||||||||    
T  20709867 cttctcaaactacaccaaatcaa 20709889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 454 - 570
Target Start/End: Original strand, 25192892 - 25193007
Alignment:
Q  454 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 553  Q
    ||||||||||||  | |||||| ||||| || ||||||||| |||||||||||||||| ||| ||||||||| ||||||||||||||| |||||||||||    
T  25192892 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacacttcacaaccattagatctagtgtacacgtgtaataattctaggcttctc 25192990  T
Q  554 aaactacaccaaatcaa 570  Q
    ||| |||||||||||||    
T  25192991 aaattacaccaaatcaa 25193007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 496 - 551
Target Start/End: Complemental strand, 14551343 - 14551288
Alignment:
Q  496 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttc 551  Q
    |||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||    
T  14551343 cataaacacttcacaaccatcagatctagtgtacatgtgtaataatcctaggcttc 14551288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 484 - 551
Target Start/End: Complemental strand, 4579854 - 4579787
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttc 551  Q
    ||||||||| | ||||||||||| |||| ||||||||||||| |||||||||||||||| || |||||    
T  4579854 ttatgcaccatgcataaacactttacaaccatcagatctagtgtacacgtgtaataatcttatgcttc 4579787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 513 - 574
Target Start/End: Original strand, 43822412 - 43822473
Alignment:
Q  513 catcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaa 574  Q
    ||||||||||||| ||||||||| ||||||||||| |||| ||| ||||| |||||||||||    
T  43822412 catcagatctagtgtacacgtgtgataatcctaggtttcttaaattacacaaaatcaaggaa 43822473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 484 - 547
Target Start/End: Original strand, 5098746 - 5098809
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctagg 547  Q
    ||||||||| | |||||||||||||||| ||||| || || | |||||||||||||||||||||    
T  5098746 ttatgcaccctgcataaacacttcacaaccatcaaatttattgtacacgtgtaataatcctagg 5098809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 545
Target Start/End: Complemental strand, 36636973 - 36636912
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatccta 545  Q
    ||||| ||| |||||||||||||||||| |||||||| |  | |||||||||||||||||||    
T  36636973 ttatgtaccctacataaacacttcacaaccatcagatttgttttacacgtgtaataatccta 36636912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 484 - 520
Target Start/End: Complemental strand, 1292215 - 1292179
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagat 520  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  1292215 ttatgcaccgtacataaacacatcacaaccatcagat 1292179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 484 - 520
Target Start/End: Original strand, 9143615 - 9143651
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagat 520  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  9143615 ttatgcaccgtgcataaacacatcacaatcatcagat 9143651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 1e-55; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 454 - 687
Target Start/End: Original strand, 16115851 - 16116083
Alignment:
Q  454 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 553  Q
    ||||||||||||| | |||||| ||||| || ||||||||| |||||||||||||||| ||||| ||||| | ||||||||||||||||| || |||||     
T  16115851 ggcaaaagttatcatgcataaggaaatcctt-atgcaccgtgcataaacacttcacaaccatcaaatctaatgtacacgtgtaataatccaagacttctt 16115949  T
Q  554 aaactacaccaaatcaaggaataaaggaaagaggtatatctttattttgacnnnnnnnnntctctcactaaaaatgctttgctcacttctctctctagga 653  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||          |||||||| |||||| |||  ||||||||||||||||||    
T  16115950 aaactacaccaaatcaaggaataaaggaaagaggtatatcttcatttttacaaaaaaaaacctctcactgaaaatgttttcgtcacttctctctctagga 16116049  T
Q  654 cattcaaaccagcgccaccttatatcttcatctc 687  Q
    ||||||||||| ||| ||||||||||||| ||||    
T  16116050 cattcaaaccaacgcgaccttatatcttcttctc 16116083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 484 - 604
Target Start/End: Complemental strand, 35198217 - 35198097
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaa 583  Q
    ||||||||| | |||||||||||||||  ||||||||||||| |||||||||||||||||||| ||| ||||||||||| |||||||| |||||||||||    
T  35198217 ttatgcaccctgcataaacacttcacagccatcagatctagtgtacacgtgtaataatcctagacttttcaaactacacaaaatcaagaaataaaggaaa 35198118  T
Q  584 gaggtatatctttattttgac 604  Q
    |||||||||||| ||||||||    
T  35198117 gaggtatatcttcattttgac 35198097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 484 - 591
Target Start/End: Original strand, 37639371 - 37639478
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaa 583  Q
    ||||||||| | |||||||||||||||| ||||||||||||| |||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||    
T  37639371 ttatgcaccctgcataaacacttcacaaccatcagatctagtgtacacgtgtaataattatagacttctcaaactacaccaaatcaaggaataaaggaaa 37639470  T
Q  584 gaggtata 591  Q
    ||||||||    
T  37639471 gaggtata 37639478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 454 - 570
Target Start/End: Original strand, 18056784 - 18056899
Alignment:
Q  454 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 553  Q
    ||||||||||||  | |||||| ||||| || ||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  18056784 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctc 18056882  T
Q  554 aaactacaccaaatcaa 570  Q
    |||||||||||||||||    
T  18056883 aaactacaccaaatcaa 18056899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 454 - 570
Target Start/End: Original strand, 22348039 - 22348154
Alignment:
Q  454 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 553  Q
    ||||||||||||  | |||||| ||||| || ||||||||  |||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||    
T  22348039 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgcgcataaacacttcacaaccatcatatctagtgtacacgtgtaataatcctaggcttctc 22348137  T
Q  554 aaactacaccaaatcaa 570  Q
    |||||||||||||||||    
T  22348138 aaactacaccaaatcaa 22348154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 496 - 570
Target Start/End: Complemental strand, 23320109 - 23320035
Alignment:
Q  496 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  23320109 cataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctagacttctcaaactacaccaaatcaa 23320035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 496 - 570
Target Start/End: Original strand, 179649 - 179723
Alignment:
Q  496 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  179649 cataaacacttcacaaccatcagatctagtgtacacgtgtaataatcccaagcttctcaaactacaccaaatcaa 179723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 496 - 570
Target Start/End: Original strand, 30802437 - 30802511
Alignment:
Q  496 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  30802437 cataaacatttcacaaccatcagatctagtgtacacgtgtaataatcttaggcttctcaaactacaccaaatcaa 30802511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 484 - 570
Target Start/End: Original strand, 45889625 - 45889711
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    |||| |||||| |||||||| || |||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  45889625 ttatccaccgtgcataaacattttacaaccatcagatctagtatacatgtgtaataatcttaggcttctcaaactacaccaaatcaa 45889711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 496 - 570
Target Start/End: Complemental strand, 8402335 - 8402261
Alignment:
Q  496 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    ||||||||||||| || ||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||    
T  8402335 cataaacacttcataaccatcagatctagtgtacacatgtaataatcctaggtttctcaaactaaaccaaatcaa 8402261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 621 - 687
Target Start/End: Complemental strand, 35198068 - 35198002
Alignment:
Q  621 ctaaaaatgctttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttcatctc 687  Q
    |||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||    
T  35198068 ctaaaaatactttgctcacttctctatttaggacattcaaaccagcgccaccttatatcttcttctc 35198002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 484 - 520
Target Start/End: Original strand, 11421624 - 11421660
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagat 520  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  11421624 ttatgcaccgtgcataaacacttcacaaccatcagat 11421660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 484 - 520
Target Start/End: Original strand, 34369690 - 34369726
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagat 520  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  34369690 ttatgcaccgtgcataaacacttcacaaccatcagat 34369726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 483 - 547
Target Start/End: Original strand, 51420374 - 51420437
Alignment:
Q  483 tttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctagg 547  Q
    |||||||| | | |||||||| ||||||| |||||||| || |||||||| ||||||||||||||    
T  51420374 tttatgcatcctgcataaaca-ttcacaaccatcagatttattatacacgagtaataatcctagg 51420437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 3e-50; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 527 - 687
Target Start/End: Complemental strand, 48077857 - 48077699
Alignment:
Q  527 tacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaagaggtatatctttattttgacnnnnnnnnntctctcactaaaa 626  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||          |||||| |||||    
T  48077857 tacatgtgtaataatcctaggcttctcaaactacaccaaattaaggaataaaggaaagaggtatatcttcattttgacaaaaaaac--ctctcattaaaa 48077760  T
Q  627 atgctttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttcatctc 687  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  48077759 atgctttgctcacttctctctctaggacattcaaaccagcaccaccttatatcttcttctc 48077699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 485 - 591
Target Start/End: Complemental strand, 50563764 - 50563658
Alignment:
Q  485 tatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaag 584  Q
    |||||||| | |||||||||||||||| ||||||||||||| |||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||    
T  50563764 tatgcaccctgcataaacacttcacaaccatcagatctagtgtacacgtgtaataattataggtttctcaaactacaccaaatcaaggaataaaggaaag 50563665  T
Q  585 aggtata 591  Q
    |||||||    
T  50563664 aggtata 50563658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 454 - 570
Target Start/End: Original strand, 27764240 - 27764355
Alignment:
Q  454 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 553  Q
    ||||||||||||  | |||||| ||||| || ||||||||| |||||||||||| ||| ||||||||||||| ||||||||||||||||||| |||||||    
T  27764240 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacacttcgcaaccatcagatctagtgtacacgtgtaataatcctacgcttctc 27764338  T
Q  554 aaactacaccaaatcaa 570  Q
    |||||||||||||||||    
T  27764339 aaactacaccaaatcaa 27764355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 484 - 570
Target Start/End: Original strand, 4168387 - 4168473
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    ||||||||||| |||||||||||||||| ||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||    
T  4168387 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctaggtttctcaaactacaccaaatcaa 4168473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 483 - 570
Target Start/End: Original strand, 637882 - 637969
Alignment:
Q  483 tttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    |||||||||||| |||||||||||||||| ||||||||||||| |||| ||||||||||  |||||||||||||||||||||||||||    
T  637882 tttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacatgtgtaataattttaggcttctcaaactacaccaaatcaa 637969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 22181281 - 22181195
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    ||||||||||| |||||| ||||||||| |||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  22181281 ttatgcaccgtgcataaaaacttcacaaccatcagatttagtgtacacgtgtaataatcctaggtttctcaaactacaccaaatcaa 22181195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 26447448 - 26447362
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    ||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||| |||| |||||||||||||    
T  26447448 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttcacaaattacaccaaatcaa 26447362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 36621737 - 36621651
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    ||||||||||| |||||||||||||||| ||||||||||| | ||||||||||||||||||| |||||| |||||||||||||||||    
T  36621737 ttatgcaccgtgcataaacacttcacaaccatcagatctaatgtacacgtgtaataatcctatgcttcttaaactacaccaaatcaa 36621651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 454 - 570
Target Start/End: Original strand, 45255975 - 45256090
Alignment:
Q  454 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 553  Q
    ||||||||||||  | |||||| ||||| || ||||||||| ||||||||||||||||  ||||||| |||| |||||||||||||||||||||||| ||    
T  45255975 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacacttcacaactatcagatatagtgtacacgtgtaataatcctaggcttttc 45256073  T
Q  554 aaactacaccaaatcaa 570  Q
    |||||||| ||||||||    
T  45256074 aaactacatcaaatcaa 45256090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 38485710 - 38485624
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    ||||||||||| ||||||| |||||||| ||||||||||| | |||||||||||||||||||||||||||||| ||||  |||||||    
T  38485710 ttatgcaccgtgcataaacgcttcacaaccatcagatctaatgtacacgtgtaataatcctaggcttctcaaaatacattaaatcaa 38485624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 496 - 570
Target Start/End: Complemental strand, 51837115 - 51837041
Alignment:
Q  496 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    |||||| ||||||||| |||||||| || | ||||||||||||||||||||||||||||||||||||||||||||    
T  51837115 cataaatacttcacaaccatcagatttaatgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 51837041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 454 - 570
Target Start/End: Original strand, 21097140 - 21097255
Alignment:
Q  454 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 553  Q
    ||||||||||| | | |||||| ||||| || |||||||||  ||||||||||||||| ||| ||||||||| ||||||||||||||| ||| |||| |     
T  21097140 ggcaaaagttaccgtgcataaggaaatcctt-atgcaccgtgtataaacacttcacaaccattagatctagtttacacgtgtaataattctaagcttatt 21097238  T
Q  554 aaactacaccaaatcaa 570  Q
    ||| |||||||||||||    
T  21097239 aaattacaccaaatcaa 21097255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 496 - 545
Target Start/End: Complemental strand, 6386565 - 6386516
Alignment:
Q  496 cataaacacttcacaatcatcagatctagtatacacgtgtaataatccta 545  Q
    |||||||||||||||| |||||||| ||||  ||||||||||||||||||    
T  6386565 cataaacacttcacaaccatcagatttagtggacacgtgtaataatccta 6386516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 1729652 - 1729604
Alignment:
Q  483 tttatgcaccgtacataaacacttcacaatcatcagatctagtatacac 531  Q
    ||||| |||||| |||||||||||||||| ||||||||||||| |||||    
T  1729652 tttatacaccgtgcataaacacttcacaaccatcagatctagtgtacac 1729604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 456 - 520
Target Start/End: Complemental strand, 29826669 - 29826606
Alignment:
Q  456 caaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagat 520  Q
    ||||||||||  |||||||| ||||| || ||||||||| ||||| |||||||||| ||||||||    
T  29826669 caaaagttatggtacataaggaaatcctt-atgcaccgtgcataagcacttcacaaccatcagat 29826606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 2e-44; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 484 - 687
Target Start/End: Original strand, 15181820 - 15182028
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaa 583  Q
    ||||||||| | |||||||||||||||| ||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||| |||| ||||||    
T  15181820 ttatgcaccctgcataaacacttcacaagcatcagatctagtgtacacgtgtaataatcttaggtttctcaaactacaccaaatcaag-aatataggaaa 15181918  T
Q  584 gaggtatatctttattttgacnnnnnnnnnt---------ctctcactaaaaatgctttgctcacttctctctctaggacattcaaaccagcgccacctt 674  Q
    |   |||||||| ||||||||                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15181919 g---tatatcttcattttgacaaaaaaaaaaaaaaaaaacctctcactaaaaatgctttgctcacttctctctctaggacattcaaaccagcgccacctt 15182015  T
Q  675 atatcttcatctc 687  Q
    |||||||| ||||    
T  15182016 atatcttcttctc 15182028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 454 - 570
Target Start/End: Complemental strand, 32987510 - 32987395
Alignment:
Q  454 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 553  Q
    ||||||||||||  | |||||| ||||| || ||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  32987510 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctc 32987412  T
Q  554 aaactacaccaaatcaa 570  Q
    |||||||||||||||||    
T  32987411 aaactacaccaaatcaa 32987395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 454 - 570
Target Start/End: Original strand, 39021975 - 39022090
Alignment:
Q  454 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 553  Q
    ||||||||||||  | |||||| ||||| || ||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  39021975 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacacttcacaatcatcagatctagtgtacatgtgtaataatcctaggcttctc 39022073  T
Q  554 aaactacaccaaatcaa 570  Q
    |||||||||||||||||    
T  39022074 aaactacaccaaatcaa 39022090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 454 - 570
Target Start/End: Original strand, 7058114 - 7058229
Alignment:
Q  454 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 553  Q
    ||||||||||||  | |||||| |||| | ||||||||||| |||||||||||||||| |||| |||||||| |||||||||||||||||||| ||||||    
T  7058114 ggcaaaagttatggtgcataaggaaat-acttatgcaccgtgcataaacacttcacaaccatccgatctagtgtacacgtgtaataatcctagacttctc 7058212  T
Q  554 aaactacaccaaatcaa 570  Q
    |||||||||||||||||    
T  7058213 aaactacaccaaatcaa 7058229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 4836737 - 4836651
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    ||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||    
T  4836737 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaagcttttcaaactacaccaaatcaa 4836651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 4842182 - 4842096
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    ||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||    
T  4842182 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaagcttttcaaactacaccaaatcaa 4842096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 484 - 570
Target Start/End: Original strand, 7614097 - 7614183
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    ||||||||| | |||||||||||||||| ||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||    
T  7614097 ttatgcaccatgcataaacacttcacaaccatcagatctaatgtacacgtgtaataatcataggcttctcaaactacaccaaatcaa 7614183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 484 - 570
Target Start/End: Original strand, 8550533 - 8550619
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    ||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||| || |||||||||| |||||||||||||    
T  8550533 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcataagcttctcaaattacaccaaatcaa 8550619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 15260887 - 15260801
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    ||||||||||| |||||||||||||||| ||||| ||||||| ||||||| ||||||||| ||||||||||||||||||||||||||    
T  15260887 ttatgcaccgtgcataaacacttcacaaccatcaaatctagtgtacacgtttaataatccaaggcttctcaaactacaccaaatcaa 15260801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 454 - 551
Target Start/End: Original strand, 1208709 - 1208805
Alignment:
Q  454 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttc 551  Q
    ||||||||||||  | |||||| ||||| || ||||||||| ||||||||||| |||| ||| ||||||||| |||||||||||||||||||||||||    
T  1208709 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacactttacaaccataagatctagtgtacacgtgtaataatcctaggcttc 1208805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 531 - 570
Target Start/End: Original strand, 2750101 - 2750140
Alignment:
Q  531 cgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    |||||||||||| ||| |||||||||||||||||||||||    
T  2750101 cgtgtaataatcatagacttctcaaactacaccaaatcaa 2750140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 543
Target Start/End: Original strand, 1671850 - 1671891
Alignment:
Q  502 cacttcacaatcatcagatctagtatacacgtgtaataatcc 543  Q
    ||||||||||||||||||| |||| || ||||||||||||||    
T  1671850 cacttcacaatcatcagatttagtgtatacgtgtaataatcc 1671891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 484 - 520
Target Start/End: Original strand, 41451135 - 41451171
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagat 520  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  41451135 ttatgcaccgtgcataaacacgtcacaatcatcagat 41451171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 2e-44; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 484 - 591
Target Start/End: Original strand, 5757416 - 5757523
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaa 583  Q
    ||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5757416 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctagacttctcaaactacaccaaatcaaggaataaaggaaa 5757515  T
Q  584 gaggtata 591  Q
    ||||||||    
T  5757516 gaggtata 5757523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 483 - 591
Target Start/End: Original strand, 32090606 - 32090714
Alignment:
Q  483 tttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaa 582  Q
    |||||||||| | |||||||| |||| || ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32090606 tttatgcaccctgcataaacaattcagaaccatcaaatctagtatacacgtgtaataatcataggcttctcaaactacaccaaatcaaggaataaaggaa 32090705  T
Q  583 agaggtata 591  Q
    |||||||||    
T  32090706 agaggtata 32090714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 46573536 - 46573450
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    |||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  46573536 ttatgcaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 46573450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 454 - 570
Target Start/End: Original strand, 30428873 - 30428988
Alignment:
Q  454 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 553  Q
    ||||||||||||  | |||||| ||||| || ||||||||| |||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  30428873 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacatttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctc 30428971  T
Q  554 aaactacaccaaatcaa 570  Q
    |||||||||||||||||    
T  30428972 aaactacaccaaatcaa 30428988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 616 - 687
Target Start/End: Original strand, 32090759 - 32090830
Alignment:
Q  616 tctcactaaaaatgctttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttcatctc 687  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32090759 tctcactaaaaatgccttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttcttctc 32090830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 490 - 570
Target Start/End: Original strand, 33797966 - 33798046
Alignment:
Q  490 accgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  33797966 accgtgcataaacatttcacaaccatcagatctagtatacacgtgtaataatcctagacttctcaaactacatcaaatcaa 33798046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 454 - 570
Target Start/End: Original strand, 46024027 - 46024142
Alignment:
Q  454 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 553  Q
    ||||||||||||  | || ||||||||| || ||||||||| |||||||||||||||| |||||||| |||| |||||||||||||||||||| ||||||    
T  46024027 ggcaaaagttatggtgcacaagaaaatcctt-atgcaccgtgcataaacacttcacaaccatcagatatagtgtacacgtgtaataatcctagacttctc 46024125  T
Q  554 aaactacaccaaatcaa 570  Q
    ||||||||  |||||||    
T  46024126 aaactacattaaatcaa 46024142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 454 - 570
Target Start/End: Complemental strand, 15975001 - 15974886
Alignment:
Q  454 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 553  Q
    ||||||||||||  | |||||| ||||| || ||||||||| |||||||||||||||| ||||| || |||| ||||| |||||||||| ||||||| ||    
T  15975001 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacacttcacaaccatcatatttagtgtacacatgtaataatcttaggcttatc 15974903  T
Q  554 aaactacaccaaatcaa 570  Q
    ||| |||||||||||||    
T  15974902 aaagtacaccaaatcaa 15974886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 484 - 551
Target Start/End: Original strand, 28396751 - 28396818
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttc 551  Q
    ||||||||||| |||||||| ||||||||||||||||||||| |||| | ||||||||||||||||||    
T  28396751 ttatgcaccgtgcataaacatttcacaatcatcagatctagtgtacaagagtaataatcctaggcttc 28396818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 454 - 554
Target Start/End: Original strand, 12279641 - 12279740
Alignment:
Q  454 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 553  Q
    ||||||||||||  |||||||| |||||||| |||||||||  ||||| ||||||||| ||| ||||| ||| |||||||||||| ||||||||| ||||    
T  12279641 ggcaaaagttatggtacataaggaaatcatt-atgcaccgtgtataaagacttcacaaccattagatccagtgtacacgtgtaatgatcctaggcctctc 12279739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 454 - 554
Target Start/End: Original strand, 12279745 - 12279844
Alignment:
Q  454 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 553  Q
    ||||||||||||  | |||||| ||||| |||||||||||| |||||| ||||||||| ||| ||||||||| || ||||||||| ||||||||| ||||    
T  12279745 ggcaaaagttatggtgcataaggaaatc-tttatgcaccgtgcataaagacttcacaaccattagatctagtgtatacgtgtaatgatcctaggcctctc 12279843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 484 - 551
Target Start/End: Original strand, 48690924 - 48690991
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttc 551  Q
    ||||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||||| ||||||||    
T  48690924 ttatgcaccgtgcataaacagttcacaaccatcaaatctagtgtacacgtgtaataatcataggcttc 48690991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 496 - 551
Target Start/End: Original strand, 48691033 - 48691088
Alignment:
Q  496 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttc 551  Q
    |||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  48691033 catagacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 48691088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 484 - 546
Target Start/End: Original strand, 48305265 - 48305327
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctag 546  Q
    ||||||||||| ||||||||||| |||| |||| |||||||| ||||||| ||||||||||||    
T  48305265 ttatgcaccgtgcataaacactttacaaacatcggatctagtgtacacgtataataatcctag 48305327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 484 - 545
Target Start/End: Complemental strand, 44141287 - 44141226
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatccta 545  Q
    ||||||||| | |||||||||||||||| |||| ||| |||| |||||||||||||||||||    
T  44141287 ttatgcaccctgcataaacacttcacaaccatctgatttagtgtacacgtgtaataatccta 44141226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 615 - 648
Target Start/End: Original strand, 5757566 - 5757599
Alignment:
Q  615 ctctcactaaaaatgctttgctcacttctctctc 648  Q
    ||||| ||||||||||||||||||||||||||||    
T  5757566 ctctcgctaaaaatgctttgctcacttctctctc 5757599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 456 - 570
Target Start/End: Original strand, 50754008 - 50754121
Alignment:
Q  456 caaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaa 555  Q
    ||||||||||  |||||||| ||||| || ||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  50754008 caaaagttatggtacataaggaaatcctt-atgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaa 50754106  T
Q  556 actacaccaaatcaa 570  Q
    |||||||||||||||    
T  50754107 actacaccaaatcaa 50754121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 52987686 - 52987600
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    ||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  52987686 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 52987600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 454 - 570
Target Start/End: Complemental strand, 51362503 - 51362388
Alignment:
Q  454 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 553  Q
    ||||||||||||  | |||||| ||||| || ||||||||| |||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||    
T  51362503 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacacttcacaaccatcagatttagtgtacacgtgtaataatcctaggcttctc 51362405  T
Q  554 aaactacaccaaatcaa 570  Q
    |||||||||||||||||    
T  51362404 aaactacaccaaatcaa 51362388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 496 - 591
Target Start/End: Original strand, 23699369 - 23699464
Alignment:
Q  496 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaagaggtata 591  Q
    |||||||||||||||| ||||| ||||| | |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  23699369 cataaacacttcacaaccatcatatctaatgtacacgtgtaataatcctaggcttttcaaactacatcaaatcaaggaataaaggaaagaggtata 23699464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 496 - 591
Target Start/End: Original strand, 23717824 - 23717919
Alignment:
Q  496 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaagaggtata 591  Q
    |||||||||||||||| ||||| ||||| | |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  23717824 cataaacacttcacaaccatcatatctaatgtacacgtgtaataatcctaggcttttcaaactacatcaaatcaaggaataaaggaaagaggtata 23717919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 496 - 591
Target Start/End: Original strand, 23736280 - 23736375
Alignment:
Q  496 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaagaggtata 591  Q
    |||||||||||||||| ||||| ||||| | |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  23736280 cataaacacttcacaaccatcatatctaatgtacacgtgtaataatcctaggcttttcaaactacatcaaatcaaggaataaaggaaagaggtata 23736375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 454 - 570
Target Start/End: Original strand, 8718101 - 8718216
Alignment:
Q  454 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 553  Q
    ||||||||||||  | |||||| ||||| || |||||||||||||||| ||||||||| ||||||||||||| |||| |||||||||||||||||||||     
T  8718101 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtacataaatacttcacaaccatcagatctagtgtacatgtgtaataatcctaggcttctt 8718199  T
Q  554 aaactacaccaaatcaa 570  Q
    |||||||||||||||||    
T  8718200 aaactacaccaaatcaa 8718216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 454 - 570
Target Start/End: Original strand, 9069988 - 9070103
Alignment:
Q  454 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 553  Q
    ||||||||||||  | |||||| ||||| || |||||||||||||||| ||||||||| ||||||||||||| |||| |||||||||||||||||||||     
T  9069988 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtacataaatacttcacaaccatcagatctagtgtacatgtgtaataatcctaggcttctt 9070086  T
Q  554 aaactacaccaaatcaa 570  Q
    |||||||||||||||||    
T  9070087 aaactacaccaaatcaa 9070103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 470 - 570
Target Start/End: Complemental strand, 16277463 - 16277364
Alignment:
Q  470 cataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatca 569  Q
    |||||| ||||| |||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  16277463 cataaggaaatc-tttatgcaccgtgcataaacacttcacaaccatcatatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatca 16277365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 453 - 570
Target Start/End: Complemental strand, 19385381 - 19385265
Alignment:
Q  453 aggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttct 552  Q
    |||||||||||||  | |||||| ||||| || ||||||||| |||||||||||||||| |||||||| |||| ||||||||||||||| ||||||||||    
T  19385381 aggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacacttcacaaccatcagatttagtgtacacgtgtaataattctaggcttct 19385283  T
Q  553 caaactacaccaaatcaa 570  Q
    ||||||||| ||||||||    
T  19385282 caaactacatcaaatcaa 19385265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 615 - 687
Target Start/End: Original strand, 23755458 - 23755530
Alignment:
Q  615 ctctcactaaaaatgctttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttcatctc 687  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  23755458 ctctcactaaaaatgctttgctcacttctctctctagaacattcaaaccagcgccaccttatatcttcttctc 23755530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 615 - 682
Target Start/End: Original strand, 23699507 - 23699574
Alignment:
Q  615 ctctcactaaaaatgctttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttc 682  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23699507 ctctcactaaaaatactttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttc 23699574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 615 - 682
Target Start/End: Original strand, 23717962 - 23718029
Alignment:
Q  615 ctctcactaaaaatgctttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttc 682  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23717962 ctctcactaaaaatactttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttc 23718029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 615 - 682
Target Start/End: Original strand, 23736418 - 23736485
Alignment:
Q  615 ctctcactaaaaatgctttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttc 682  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23736418 ctctcactaaaaatactttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttc 23736485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 484 - 570
Target Start/End: Original strand, 39099226 - 39099312
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    ||||||||||| |||||| | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  39099226 ttatgcaccgtgcataaatatttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacactaaatcaa 39099312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 7045336 - 7045250
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    |||||||||||  ||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||| |||||| ||||||||    
T  7045336 ttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataatcgtaggcttctcagactacatcaaatcaa 7045250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 527 - 591
Target Start/End: Original strand, 23755351 - 23755415
Alignment:
Q  527 tacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaagaggtata 591  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  23755351 tacacgtgtaataatcctaggcttctcaaattacatcaaatcaaggaataaaggaaagaggtata 23755415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 496 - 554
Target Start/End: Complemental strand, 17627255 - 17627197
Alignment:
Q  496 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctca 554  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||    
T  17627255 cataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggtttctca 17627197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 448 - 570
Target Start/End: Original strand, 13607 - 13728
Alignment:
Q  448 agtggaggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctagg 547  Q
    ||||| ||||||||||||  | |||||| ||||| || || |||||| |||||||||||||||| ||||||||||||| ||||| ||||||||||||| |    
T  13607 agtggtggcaaaagttatggtgcataaggaaatcctt-atccaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctacg 13705  T
Q  548 cttctcaaactacaccaaatcaa 570  Q
    |||||||||||||||||||||||    
T  13706 cttctcaaactacaccaaatcaa 13728  T

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Target: scaffold0238 (Bit Score: 61; Significance: 8e-26; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 454 - 570
Target Start/End: Complemental strand, 25297 - 25182
Alignment:
Q  454 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 553  Q
    ||||||||||||  | |||||| ||||| || ||||||||| |||||||||||||||| |||||||| |||| ||||||||| |||||| |||| |||||    
T  25297 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacacttcacaaccatcagatttagtgtacacgtgtcataatcttaggtttctc 25199  T
Q  554 aaactacaccaaatcaa 570  Q
    |||||||||||||||||    
T  25198 aaactacaccaaatcaa 25182  T

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Target: scaffold0194 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 484 - 570
Target Start/End: Original strand, 27636 - 27722
Alignment:
Q  484 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 570  Q
    ||||| ||||| ||||||||||||||||  || ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  27636 ttatgtaccgtgcataaacacttcacaactataagatctagtgtacacgtgtaataattctaggcttctcaaactacaccaaatcaa 27722  T

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Target: scaffold0337 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 483 - 554
Target Start/End: Original strand, 7045 - 7116
Alignment:
Q  483 tttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctca 554  Q
    ||||| |||||| |||||||||||||||| ||||||||||||| ||||| ||||||||||||||| ||||||    
T  7045 tttatacaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctaggtttctca 7116  T

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Target: scaffold0544 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 455 - 553
Target Start/End: Complemental strand, 10739 - 10642
Alignment:
Q  455 gcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 553  Q
    |||||||||||  | |||||| ||||| || || |||||| |||||||||||||||| ||||||||||||| | ||  ||||||||||||||| |||||    
T  10739 gcaaaagttatggtgcataaggaaatcctt-atacaccgtgcataaacacttcacaaccatcagatctagtgtgcatatgtaataatcctaggtttctc 10642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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