View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18823_low_15 (Length: 250)
Name: NF18823_low_15
Description: NF18823
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18823_low_15 |
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Alignment Details
Target: chr5 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 19 - 245
Target Start/End: Original strand, 13455122 - 13455348
Alignment:
| Q |
19 |
atttttagttcttgttcaactttcttgtagatgctagaaatgttatgttttatgttatagaaacaatactatgatcggtgagcttaattagagtgaaggg |
118 |
Q |
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| T |
13455122 |
atttttagttcttgttcaactttcttgtagatgctagaaatgttatgttttatgttatagaaacaatactatgatcggtgagcttaattagagtgaaggg |
13455221 |
T |
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| Q |
119 |
ctacttatatatatgcttattggtggctgcaatgacgtatatggttacgttcttcatatattttaaccgacgacatttttgacttaccttgctcaactat |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13455222 |
ctacttatatatatgcttattggtggctgcaatgacgtatatggttacgttcttcatatattttaaccgacgacatttttgacttaccttgctcaactat |
13455321 |
T |
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| Q |
219 |
aaacaaactaccttatcctttgctact |
245 |
Q |
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||||||||||||||||| ||||||||| |
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| T |
13455322 |
aaacaaactaccttatcttttgctact |
13455348 |
T |
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