View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18827_high_20 (Length: 268)
Name: NF18827_high_20
Description: NF18827
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18827_high_20 |
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Alignment Details
Target: chr2 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 57 - 262
Target Start/End: Original strand, 17112529 - 17112732
Alignment:
| Q |
57 |
attttttaattgcacactgatcttttgtagactatataaatagtggcccacattctcgttgcatcaaactctactcgtgagtggagtgcttcctataaca |
156 |
Q |
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| T |
17112529 |
attttttaattgcacactgatcttt-gtagactatatcaatagtggcccacattctcgttgcatcaaactctactcgtgagtggagtgcttcctataaca |
17112627 |
T |
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| Q |
157 |
aaaaatcacaaacacaattgacataacatttcacatcacaacattttccaatacccaccataatcacatcactatttaattgctttattaaatttccaca |
256 |
Q |
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| T |
17112628 |
aaaaatcacaaacacaattgacat-acatttcacatcacaacattttccaatacccaccataatcacaccactatttaattgctttattaaatttccaca |
17112726 |
T |
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| Q |
257 |
aagagt |
262 |
Q |
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|||||| |
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| T |
17112727 |
aagagt |
17112732 |
T |
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