View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18829_low_13 (Length: 279)
Name: NF18829_low_13
Description: NF18829
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18829_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 40165801 - 40166064
Alignment:
| Q |
1 |
aaggtaaaggcaacgttgatgagcaattttcctcctccttttccggaaaaaatgtgttctaagtttcctcaccattttgtcaaatagtgaattaaaacgc |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
40165801 |
aaggtaaaggcaacgttgatgagcaattttcctcctccttttccggaaaaaatgtgttccaagtttcctcaccattttgtcaaatagtgaattaaaacgc |
40165900 |
T |
|
| Q |
101 |
aagaatatcagaaaagttgcaatattatacggtgtgnnnnnnnnnnnnnnnnnncaaagagttgtctttaactttagatctattgtgttcttgtaagtta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40165901 |
aagaatatcagaaaagttgcaatattatacggtgtgaaaaataaattaaaaaaacaaagagttgtctttaactttagatctattgtgttcttgtaagtta |
40166000 |
T |
|
| Q |
201 |
cacatcccgatcgaccatctgctgctgtatcaaggtgagtgtcgtgtacgaaaatgttttgttt |
264 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40166001 |
cacatcccgatcgaccatctgctgctgtatcaaggtgagtgtcgtgtacgaaaatgttttgttt |
40166064 |
T |
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