View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1882_low_4 (Length: 283)

Name: NF1882_low_4
Description: NF1882
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1882_low_4
NF1882_low_4
[»] chr7 (26 HSPs)
chr7 (18-283)||(48175019-48175284)
chr7 (204-283)||(1649204-1649284)
chr7 (205-283)||(10958085-10958164)
chr7 (204-283)||(29658237-29658315)
chr7 (218-282)||(24579263-24579328)
chr7 (204-279)||(4169132-4169206)
chr7 (217-283)||(41853501-41853568)
chr7 (217-283)||(43635640-43635707)
chr7 (217-275)||(44409260-44409319)
chr7 (218-283)||(35195895-35195961)
chr7 (204-273)||(35498459-35498528)
chr7 (235-283)||(2567826-2567875)
chr7 (235-283)||(10020463-10020512)
chr7 (214-283)||(34948158-34948226)
chr7 (255-283)||(3889815-3889843)
chr7 (255-283)||(11808090-11808118)
chr7 (255-283)||(14707344-14707372)
chr7 (255-283)||(19126789-19126817)
chr7 (255-283)||(21285368-21285396)
chr7 (243-283)||(21877675-21877715)
chr7 (243-283)||(23470504-23470544)
chr7 (232-271)||(26734262-26734302)
chr7 (255-283)||(28914892-28914920)
chr7 (255-283)||(31793520-31793548)
chr7 (255-283)||(33202569-33202597)
chr7 (255-283)||(40273873-40273901)
[»] chr1 (36 HSPs)
chr1 (214-283)||(2903000-2903070)
chr1 (204-283)||(9768772-9768852)
chr1 (204-283)||(9769543-9769623)
chr1 (205-283)||(12553246-12553325)
chr1 (232-281)||(3341727-3341777)
chr1 (232-283)||(11238019-11238071)
chr1 (232-283)||(41677112-41677164)
chr1 (232-283)||(48260180-48260232)
chr1 (243-283)||(50199479-50199519)
chr1 (217-283)||(195096-195163)
chr1 (217-282)||(1721193-1721259)
chr1 (214-283)||(16182861-16182931)
chr1 (214-283)||(15774287-15774355)
chr1 (232-283)||(9976375-9976427)
chr1 (204-283)||(24168540-24168622)
chr1 (233-280)||(27654997-27655045)
chr1 (243-283)||(33844669-33844709)
chr1 (243-283)||(33949269-33949309)
chr1 (217-283)||(41998149-41998216)
chr1 (217-283)||(43020663-43020730)
chr1 (217-283)||(11405508-11405573)
chr1 (217-274)||(19866536-19866594)
chr1 (228-282)||(35593816-35593869)
chr1 (233-279)||(41182830-41182876)
chr1 (217-282)||(48565123-48565189)
chr1 (255-283)||(15368857-15368885)
chr1 (255-283)||(17350113-17350141)
chr1 (232-283)||(18003868-18003920)
chr1 (255-283)||(19424098-19424126)
chr1 (255-283)||(23368747-23368775)
chr1 (255-283)||(24134639-24134667)
chr1 (255-283)||(29491522-29491550)
chr1 (255-283)||(32635192-32635220)
chr1 (255-283)||(37733807-37733835)
chr1 (255-283)||(38021304-38021332)
chr1 (255-283)||(39238768-39238796)
[»] chr4 (41 HSPs)
chr4 (205-283)||(49039409-49039488)
chr4 (217-283)||(6202655-6202722)
chr4 (205-283)||(36257746-36257823)
chr4 (232-283)||(33359869-33359921)
chr4 (214-272)||(41492472-41492531)
chr4 (245-283)||(29785202-29785240)
chr4 (235-283)||(21023346-21023395)
chr4 (232-283)||(12585550-12585602)
chr4 (232-283)||(24039936-24039988)
chr4 (232-283)||(32690160-32690212)
chr4 (204-283)||(42411418-42411497)
chr4 (204-283)||(21476046-21476124)
chr4 (245-283)||(41346807-41346845)
chr4 (245-283)||(49319445-49319483)
chr4 (234-283)||(7768783-7768831)
chr4 (234-283)||(30616052-30616100)
chr4 (255-283)||(3465635-3465663)
chr4 (255-283)||(8690266-8690294)
chr4 (255-283)||(9693014-9693042)
chr4 (255-283)||(10757790-10757818)
chr4 (255-283)||(10970961-10970989)
chr4 (255-283)||(11491234-11491262)
chr4 (255-283)||(12856236-12856264)
chr4 (255-283)||(14149845-14149873)
chr4 (232-283)||(20610791-20610843)
chr4 (255-283)||(27862846-27862874)
chr4 (255-283)||(28221322-28221350)
chr4 (255-283)||(28520746-28520774)
chr4 (255-283)||(34773698-34773726)
chr4 (255-283)||(36576316-36576344)
chr4 (255-283)||(37274632-37274660)
chr4 (255-283)||(40406975-40407003)
chr4 (255-283)||(43362183-43362211)
chr4 (255-283)||(45350328-45350356)
chr4 (255-283)||(45359807-45359835)
chr4 (255-283)||(45847941-45847969)
chr4 (255-283)||(46283174-46283202)
chr4 (255-283)||(47017961-47017989)
chr4 (255-283)||(48968225-48968253)
chr4 (255-283)||(53815748-53815776)
chr4 (232-283)||(54854170-54854222)
[»] scaffold0119 (1 HSPs)
scaffold0119 (204-283)||(1091-1171)
[»] chr6 (28 HSPs)
chr6 (204-283)||(26669622-26669702)
chr6 (204-283)||(17305569-17305648)
chr6 (220-283)||(19680227-19680291)
chr6 (232-283)||(30833069-30833121)
chr6 (204-283)||(12089149-12089227)
chr6 (220-283)||(9422885-9422950)
chr6 (232-279)||(7234021-7234069)
chr6 (235-283)||(20149973-20150023)
chr6 (235-283)||(22182809-22182859)
chr6 (245-283)||(24256968-24257006)
chr6 (205-283)||(25020494-25020571)
chr6 (245-282)||(8309217-8309254)
chr6 (255-283)||(3448404-3448432)
chr6 (255-283)||(4854321-4854349)
chr6 (255-283)||(6144016-6144044)
chr6 (255-283)||(6228275-6228303)
chr6 (255-283)||(7720518-7720546)
chr6 (232-283)||(9051282-9051334)
chr6 (255-283)||(9491750-9491778)
chr6 (255-283)||(17751352-17751380)
chr6 (255-283)||(18903382-18903410)
chr6 (255-283)||(20415577-20415605)
chr6 (255-283)||(22983632-22983660)
chr6 (255-283)||(23804748-23804776)
chr6 (255-283)||(29284170-29284198)
chr6 (243-283)||(29430306-29430346)
chr6 (255-283)||(33628956-33628984)
chr6 (232-283)||(34524927-34524979)
[»] chr5 (26 HSPs)
chr5 (204-283)||(10106682-10106762)
chr5 (204-283)||(28537187-28537267)
chr5 (232-283)||(31556870-31556922)
chr5 (232-283)||(10943768-10943818)
chr5 (233-283)||(22396980-22397031)
chr5 (217-283)||(27006392-27006459)
chr5 (218-279)||(37986844-37986906)
chr5 (227-283)||(40384303-40384360)
chr5 (204-283)||(1244692-1244770)
chr5 (232-278)||(11246485-11246532)
chr5 (245-283)||(3535941-3535979)
chr5 (234-283)||(41539366-41539416)
chr5 (246-283)||(15106893-15106930)
chr5 (235-279)||(22687875-22687920)
chr5 (235-283)||(29561700-29561749)
chr5 (255-283)||(843383-843411)
chr5 (255-283)||(1463923-1463951)
chr5 (255-283)||(4674830-4674858)
chr5 (255-283)||(8015887-8015915)
chr5 (255-283)||(29096323-29096351)
chr5 (255-283)||(31250199-31250227)
chr5 (255-283)||(35168647-35168675)
chr5 (255-283)||(36045149-36045177)
chr5 (255-283)||(38503272-38503300)
chr5 (255-283)||(38618696-38618724)
chr5 (255-283)||(43227918-43227946)
[»] chr2 (24 HSPs)
chr2 (232-283)||(1244621-1244673)
chr2 (232-283)||(12206550-12206602)
chr2 (217-283)||(11133128-11133193)
chr2 (245-283)||(32288428-32288466)
chr2 (235-283)||(2057531-2057580)
chr2 (235-283)||(44487761-44487810)
chr2 (255-283)||(580798-580826)
chr2 (255-283)||(3037637-3037665)
chr2 (255-283)||(3330216-3330244)
chr2 (255-283)||(4157664-4157692)
chr2 (255-283)||(8234807-8234835)
chr2 (255-283)||(9796949-9796977)
chr2 (217-283)||(10602057-10602125)
chr2 (255-283)||(17154701-17154729)
chr2 (216-283)||(18089781-18089849)
chr2 (243-283)||(25406653-25406693)
chr2 (255-283)||(29035028-29035056)
chr2 (255-283)||(33613620-33613648)
chr2 (255-283)||(34034402-34034430)
chr2 (232-283)||(34107326-34107378)
chr2 (243-283)||(36413812-36413852)
chr2 (255-283)||(36520795-36520823)
chr2 (255-283)||(42678339-42678367)
chr2 (255-283)||(44422159-44422187)
[»] chr3 (40 HSPs)
chr3 (214-283)||(28951918-28951988)
chr3 (231-283)||(32080107-32080160)
chr3 (227-283)||(3955360-3955415)
chr3 (204-283)||(14417920-14417998)
chr3 (232-283)||(36331719-36331769)
chr3 (218-279)||(40160791-40160853)
chr3 (227-283)||(4045620-4045677)
chr3 (235-283)||(17262271-17262320)
chr3 (214-283)||(36727438-36727506)
chr3 (232-283)||(21248981-21249033)
chr3 (244-279)||(24130615-24130650)
chr3 (217-283)||(40956663-40956730)
chr3 (232-283)||(50724419-50724469)
chr3 (232-283)||(50788379-50788429)
chr3 (245-283)||(16893450-16893488)
chr3 (217-283)||(32508772-32508837)
chr3 (245-283)||(42665930-42665968)
chr3 (217-282)||(18201455-18201519)
chr3 (214-281)||(24136725-24136793)
chr3 (246-283)||(34407096-34407133)
chr3 (214-283)||(46328899-46328967)
chr3 (214-283)||(49639080-49639148)
chr3 (245-282)||(55318070-55318107)
chr3 (255-283)||(2732715-2732743)
chr3 (255-283)||(9625035-9625063)
chr3 (255-283)||(10959185-10959213)
chr3 (247-283)||(11668276-11668312)
chr3 (255-283)||(24537879-24537907)
chr3 (255-283)||(24559441-24559469)
chr3 (255-283)||(27066662-27066690)
chr3 (255-283)||(27183696-27183724)
chr3 (255-283)||(27471556-27471584)
chr3 (255-283)||(29645842-29645870)
chr3 (243-283)||(31108763-31108803)
chr3 (255-283)||(33206809-33206837)
chr3 (227-283)||(39946540-39946596)
chr3 (255-283)||(45431679-45431707)
chr3 (255-283)||(47864688-47864716)
chr3 (255-283)||(49146136-49146164)
chr3 (255-283)||(49429512-49429540)
[»] chr8 (28 HSPs)
chr8 (217-283)||(26657908-26657975)
chr8 (214-283)||(220335-220405)
chr8 (214-283)||(689490-689560)
chr8 (214-283)||(733958-734028)
chr8 (214-283)||(857854-857924)
chr8 (246-283)||(17467329-17467366)
chr8 (204-283)||(35779805-35779885)
chr8 (245-283)||(16935639-16935677)
chr8 (214-283)||(18123913-18123983)
chr8 (205-283)||(33570395-33570472)
chr8 (250-283)||(4798551-4798584)
chr8 (255-283)||(1360149-1360177)
chr8 (255-283)||(2696585-2696613)
chr8 (255-283)||(2800071-2800099)
chr8 (255-283)||(3311492-3311520)
chr8 (255-283)||(7314785-7314813)
chr8 (243-283)||(12926481-12926521)
chr8 (255-283)||(14010787-14010815)
chr8 (255-283)||(15042380-15042408)
chr8 (255-283)||(17855701-17855729)
chr8 (255-283)||(19957336-19957364)
chr8 (232-283)||(25470837-25470889)
chr8 (255-283)||(31129354-31129382)
chr8 (255-283)||(33524448-33524476)
chr8 (255-283)||(34073254-34073282)
chr8 (255-283)||(41454842-41454870)
chr8 (255-283)||(43456667-43456695)
chr8 (255-283)||(45536770-45536798)
[»] scaffold0054 (1 HSPs)
scaffold0054 (226-283)||(67213-67271)
[»] scaffold0334 (1 HSPs)
scaffold0334 (255-283)||(5355-5383)
[»] scaffold0036 (1 HSPs)
scaffold0036 (255-283)||(25078-25106)
[»] scaffold0001 (1 HSPs)
scaffold0001 (255-283)||(419764-419792)


Alignment Details
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 18 - 283
Target Start/End: Complemental strand, 48175284 - 48175019
Alignment:
Q  18 cgactcagttcaattcattatcaatatcatttgcacctttaaattttgattgtcaaattctcttaattccgtcttaattggatggatgagaataaagttt 117  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48175284 cgactcagttcaattctttatcaatatcatttgcacctttaaattttgattgtcaaattctcttaattccgtcttaattggatggatgagaataaagttt 48175185  T
Q  118 aaatatggttttaatctctaataatttgttttagtcatttaagttgttttatttggattcaaccatttcaagttnnnnnnngactgtttttctttattgg 217  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||       ||| |||||||||||||||    
T  48175184 aaatatggttttaatctctaatcatttgttttagtcatttaagttgttttatttggattcaaccatttcaagttaaaaaacgaccgtttttctttattgg 48175085  T
Q  218 tcaagtaacttagcggctagaattccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||| ||  ||||||||||| | ||||||||  ||||||||||||||||||||||||||||    
T  48175084 tcaagtaacctactggctagaattcaccttttcaaggggaataagtggggtgtccggggttcgaac 48175019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 283
Target Start/End: Complemental strand, 1649284 - 1649204
Alignment:
Q  204 tttttctttattggtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||| ||| |||||||| || | ||| ||||||||||| || |||||||| |||||||||||||||||| ||||||||||    
T  1649284 ttttttttttttggtcaaatagcctagtggctagaattcaccattttcaaggtgaataagtggggtgtccagggttcgaac 1649204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 283
Target Start/End: Complemental strand, 10958164 - 10958085
Alignment:
Q  205 ttttctttattggtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||| ||| |||||| |||| | ||| ||||||||||| |||||||  || |||||||||||||||||||||||||||||    
T  10958164 tttttttttttggtctagtagcctagtggctagaattcaccttttttgaggtgaataagtggggtgtccggggttcgaac 10958085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 283
Target Start/End: Original strand, 29658237 - 29658315
Alignment:
Q  204 tttttctttattggtcaagtaacttagcggctagaattccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||| ||| ||||||||||| | ||| ||||||||||| | || | ||| |||||||||||||||||||||||||||||    
T  29658237 ttttttttttttggtcaagtagcctagtggctagaattcaccttat-aaggtgaataagtggggtgtccggggttcgaac 29658315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 282
Target Start/End: Original strand, 24579263 - 24579328
Alignment:
Q  218 tcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaa 282  Q
    |||||||  |||| || |||||||| ||||||||||| ||||||||||||||||| ||||||||||    
T  24579263 tcaagtagtttagtggatagaattcacctttttcaaggtgaataagtggggtgtctggggttcgaa 24579328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 279
Target Start/End: Complemental strand, 4169206 - 4169132
Alignment:
Q  204 tttttctttattggtcaagtaacttagcggctagaattccctttttcaagctgaataagtggggtgtccggggttc 279  Q
    ||||| ||| || |||| ||||| ||| ||||||||||| |||| | ||| |||||||||||||||||||||||||    
T  4169206 tttttttttttttgtcaggtaacctagtggctagaattcactttat-aaggtgaataagtggggtgtccggggttc 4169132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 41853501 - 41853568
Alignment:
Q  217 gtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||| ||| ||||| ||||||||||| |||||||||||  ||||||||||||| | ||||||||||||    
T  41853501 gtcaggtagcttaggggctagaattctcctttttcaaggagaataagtggggtattcggggttcgaac 41853568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 43635707 - 43635640
Alignment:
Q  217 gtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||  |||| ||||||||||| || |||  ||| |||||||||||||||||||||||||||||    
T  43635707 gtcaagtagtttagtggctagaattcaccctttgtaaggtgaataagtggggtgtccggggttcgaac 43635640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 44409319 - 44409260
Alignment:
Q  217 gtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggg 275  Q
    |||||||||| ||| || |||||||| ||||||||||| |||||||||||||||| ||||    
T  44409319 gtcaagtaacctagtggttagaattcacctttttcaaggtgaataagtggggtgttcggg 44409260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 283
Target Start/End: Complemental strand, 35195961 - 35195895
Alignment:
Q  218 tcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||||| |||| | |||||| || ||||||||||| ||||||| |||||||| ||||||||||||    
T  35195961 tcaagtaatttagtgactagaagtcacctttttcaaggtgaataaatggggtgttcggggttcgaac 35195895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 273
Target Start/End: Complemental strand, 35498528 - 35498459
Alignment:
Q  204 tttttctttattggtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccg 273  Q
    ||||||||| || |||||||||  ||| ||||||||||| ||||||||||  |||||||||||||||||||    
T  35498528 tttttcttt-ttagtcaagtaatatagtggctagaattcacctttttcaaagtgaataagtggggtgtccg 35498459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 2567826 - 2567875
Alignment:
Q  235 tagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||||| ||||||||||| | ||||||||||||| |||||||||||||    
T  2567826 tagaattcacctttttcaaggttaataagtggggtgaccggggttcgaac 2567875  T

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Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 10020463 - 10020512
Alignment:
Q  235 tagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||||| ||||||||||| |||||||||||| ||| ||||||||||||    
T  10020463 tagaattcacctttttcaagatgaataagtgggttgttcggggttcgaac 10020512  T

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Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 34948226 - 34948158
Alignment:
Q  214 ttggtcaagtaacttagcggctagaattccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||| ||| | ||| ||||||||||| | || | ||| |||||||||||||||||||||||||||||    
T  34948226 ttggtcaggtagcctagtggctagaattcaccttat-aaggtgaataagtggggtgtccggggttcgaac 34948158  T

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Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 3889815 - 3889843
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  3889815 tgaataagtggggtgtccggggttcgaac 3889843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 11808118 - 11808090
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  11808118 tgaataagtggggtgtccggggttcgaac 11808090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 14707372 - 14707344
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  14707372 tgaataagtggggtgtccggggttcgaac 14707344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 19126817 - 19126789
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  19126817 tgaataagtggggtgtccggggttcgaac 19126789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 21285368 - 21285396
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  21285368 tgaataagtggggtgtccggggttcgaac 21285396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 21877675 - 21877715
Alignment:
Q  243 cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| |||||||||||||||| || |||||||||    
T  21877675 cctttttcaagatgaataagtggggtgttcgaggttcgaac 21877715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 23470504 - 23470544
Alignment:
Q  243 cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| ||||||| |||| ||||||||||||||||    
T  23470504 cctttttcaagatgaataaatgggatgtccggggttcgaac 23470544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 26734262 - 26734302
Alignment:
Q  232 ggctagaattc-cctttttcaagctgaataagtggggtgtc 271  Q
    ||||||||||| ||||||||||| |||||||||||||||||    
T  26734262 ggctagaattcacctttttcaaggtgaataagtggggtgtc 26734302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 28914892 - 28914920
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  28914892 tgaataagtggggtgtccggggttcgaac 28914920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 31793548 - 31793520
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  31793548 tgaataagtggggtgtccggggttcgaac 31793520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 33202569 - 33202597
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  33202569 tgaataagtggggtgtccggggttcgaac 33202597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 40273901 - 40273873
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  40273901 tgaataagtggggtgtccggggttcgaac 40273873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 7e-18; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 2903000 - 2903070
Alignment:
Q  214 ttggtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||||| ||| ||||||||||| ||||||||||| |||||||||||||||| ||||||||||||    
T  2903000 ttggtcaagtaacctagtggctagaattctcctttttcaaggtgaataagtggggtgttcggggttcgaac 2903070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 283
Target Start/End: Original strand, 9768772 - 9768852
Alignment:
Q  204 tttttctttattggtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||| ||| ||||||| ||| | |||  |||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  9768772 ttttttttttttggtcaggtagcctagtagctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaac 9768852  T

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Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 283
Target Start/End: Original strand, 9769543 - 9769623
Alignment:
Q  204 tttttctttattggtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||| ||| || |||| ||| ||||| || |||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  9769543 tttttttttttttgtcaggtagcttagtggttagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaac 9769623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 283
Target Start/End: Complemental strand, 12553325 - 12553246
Alignment:
Q  205 ttttctttattggtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||| ||| ||||||| ||| | ||| ||||||||||| ||||||||||  |||||||||||||||||||||||||||||    
T  12553325 tttttttttttggtcaggtagcctagtggctagaattcacctttttcaaagtgaataagtggggtgtccggggttcgaac 12553246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 3341727 - 3341777
Alignment:
Q  232 ggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcga 281  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  3341727 ggctagaattcacctttttcaaggtgaataagtggggtgtccggggttcga 3341777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 11238019 - 11238071
Alignment:
Q  232 ggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  11238019 ggctagaattcacctttttcaagatgaataagtggggtgtccgggattcgaac 11238071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 41677164 - 41677112
Alignment:
Q  232 ggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||    
T  41677164 ggctagaattcacctttttcaaggtgaataagtggggtgtccggagttcgaac 41677112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 48260180 - 48260232
Alignment:
Q  232 ggctagaattccc-tttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| | ||||||||| |||||||||||||||||||||||||||||    
T  48260180 ggctagaattcacatttttcaaggtgaataagtggggtgtccggggttcgaac 48260232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 50199479 - 50199519
Alignment:
Q  243 cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  50199479 cctttttcaaggtgaataagtggggtgtccggggttcgaac 50199519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 195163 - 195096
Alignment:
Q  217 gtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||||| ||||| || |||||||| ||||||||||| ||||||||||||||||| ||||| |||||    
T  195163 gtcaagtagcttagtggttagaattcacctttttcaaggtgaataagtggggtgtctggggtacgaac 195096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 1721259 - 1721193
Alignment:
Q  217 gtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaa 282  Q
    |||||||| | || |||||||||||| ||||||| ||| |||||||||| |||||||||||||||||    
T  1721259 gtcaagtagcctaacggctagaattcaccttttttaaggtgaataagtgaggtgtccggggttcgaa 1721193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 16182931 - 16182861
Alignment:
Q  214 ttggtcaagtaacttagcggctagaattccc-tttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||| |||| || ||||||||   ||||||||| |||||||||||||||||||||||| ||||    
T  16182931 ttggtcaagtaatttagtggttagaattcatatttttcaagatgaataagtggggtgtccggggtttgaac 16182861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 15774287 - 15774355
Alignment:
Q  214 ttggtcaagtaacttagcggctagaattccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||| ||| ||||| ||||||||||| | || | ||| |||||||||||||||||||||||||||||    
T  15774287 ttggtcaggtagcttagtggctagaattcaccttat-aaggtgaataagtggggtgtccggggttcgaac 15774355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 9976375 - 9976427
Alignment:
Q  232 ggctagaattcccttttt-caagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| |||||| |||| |||||||||||||||||||| ||||||||    
T  9976375 ggctagaattcacttttttcaaggtgaataagtggggtgtccggagttcgaac 9976427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 283
Target Start/End: Original strand, 24168540 - 24168622
Alignment:
Q  204 tttttctttattggtcaagtaacttagcggctagaattccc---tttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||| ||| || |||||||||||||| ||||||||||  |   ||||| ||| ||||||||||||||||| |||||||||||    
T  24168540 tttttttttttttgtcaagtaacttagtggctagaatttaccttttttttaaggtgaataagtggggtgtctggggttcgaac 24168622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 27654997 - 27655045
Alignment:
Q  233 gctagaattc-cctttttcaagctgaataagtggggtgtccggggttcg 280  Q
    |||||||||| ||||||||||| ||||||||||||||||| ||||||||    
T  27654997 gctagaattcacctttttcaaggtgaataagtggggtgtctggggttcg 27655045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 33844709 - 33844669
Alignment:
Q  243 cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||  |||||||||||||||||||||||||||||    
T  33844709 cctttttcaaagtgaataagtggggtgtccggggttcgaac 33844669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 33949269 - 33949309
Alignment:
Q  243 cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||  |||||||||||||||||||||||||||||    
T  33949269 cctttttcaaagtgaataagtggggtgtccggggttcgaac 33949309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 41998216 - 41998149
Alignment:
Q  217 gtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||||| | ||| ||||||||||| ||||||||||  ||||||||||||||||| | |||||||||    
T  41998216 gtcaagtagcgtagtggctagaattcgcctttttcaatgtgaataagtggggtgtctgtggttcgaac 41998149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 43020730 - 43020663
Alignment:
Q  217 gtcaagtaacttagcggctagaattccc-tttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||||| | ||| ||||||||||| | ||||||||| ||||| ||||||||||||| |||||||||    
T  43020730 gtcaagtagcgtagtggctagaattcacatttttcaaggtgaatgagtggggtgtccgaggttcgaac 43020663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 11405573 - 11405508
Alignment:
Q  217 gtcaagtaacttagcggctagaattccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||| ||| ||||| ||||||||||| | || | ||| |||||||||||||||||||||||||||||    
T  11405573 gtcaggtagcttagtggctagaattcaccttat-aaggtgaataagtggggtgtccggggttcgaac 11405508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 274
Target Start/End: Complemental strand, 19866594 - 19866536
Alignment:
Q  217 gtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccgg 274  Q
    ||||||||  |||| ||||||||||| ||||||| ||| ||||||||||||||||||||    
T  19866594 gtcaagtagtttagtggctagaattcaccttttttaaggtgaataagtggggtgtccgg 19866536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 35593869 - 35593816
Alignment:
Q  228 tagcggctagaattccctttttcaagctgaataagtggggtgtccggggttcgaa 282  Q
    ||||||||||||||| | || | ||| ||||||||||||||||||||||||||||    
T  35593869 tagcggctagaattcaccttat-aaggtgaataagtggggtgtccggggttcgaa 35593816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 41182876 - 41182830
Alignment:
Q  233 gctagaattccctttttcaagctgaataagtggggtgtccggggttc 279  Q
    |||||||||| | |||||||  |||||||||||||||||||||||||    
T  41182876 gctagaattcaccttttcaaagtgaataagtggggtgtccggggttc 41182830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 282
Target Start/End: Original strand, 48565123 - 48565189
Alignment:
Q  217 gtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaa 282  Q
    |||||||| ||||| | ||||||||| ||||||||||  | ||||||||||||||||| ||||||||    
T  48565123 gtcaagtagcttagtgtctagaattcacctttttcaaagtaaataagtggggtgtccgaggttcgaa 48565189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 15368885 - 15368857
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  15368885 tgaataagtggggtgtccggggttcgaac 15368857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 17350141 - 17350113
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  17350141 tgaataagtggggtgtccggggttcgaac 17350113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 18003920 - 18003868
Alignment:
Q  232 ggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| |||||||| || |||||||||||||||| ||||| ||||||    
T  18003920 ggctagaattcacctttttccaggtgaataagtggggtgttcggggctcgaac 18003868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 19424126 - 19424098
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  19424126 tgaataagtggggtgtccggggttcgaac 19424098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 23368747 - 23368775
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  23368747 tgaataagtggggtgtccggggttcgaac 23368775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 24134639 - 24134667
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  24134639 tgaataagtggggtgtccggggttcgaac 24134667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 29491550 - 29491522
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  29491550 tgaataagtggggtgtccggggttcgaac 29491522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 32635220 - 32635192
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  32635220 tgaataagtggggtgtccggggttcgaac 32635192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 37733835 - 37733807
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  37733835 tgaataagtggggtgtccggggttcgaac 37733807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 38021332 - 38021304
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  38021332 tgaataagtggggtgtccggggttcgaac 38021304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 39238796 - 39238768
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  39238796 tgaataagtggggtgtccggggttcgaac 39238768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 4e-16; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 205 - 283
Target Start/End: Original strand, 49039409 - 49039488
Alignment:
Q  205 ttttctttattggtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||| ||| ||||| ||||| | ||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  49039409 tttttttttttggttaagtagcctagtggctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaac 49039488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 6202722 - 6202655
Alignment:
Q  217 gtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||||| ||||| | ||||||||| ||||||||||| ||||||||| |||||||||||||||||||    
T  6202722 gtcaagtagcttagtgactagaattcacctttttcaagatgaataagtagggtgtccggggttcgaac 6202655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 283
Target Start/End: Complemental strand, 36257823 - 36257746
Alignment:
Q  205 ttttctttattggtcaagtaacttagcggctagaattccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||| ||| |||||| |||| | ||| ||||||||||| |||||| ||| |||||||||||||||||||||||||||||    
T  36257823 tttttttttttggtctagtagcctagtggctagaattcactttttaaag-tgaataagtggggtgtccggggttcgaac 36257746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 33359921 - 33359869
Alignment:
Q  232 ggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  33359921 ggctagaattcacctttttcaaggtgaataagtggggtgtccagggttcgaac 33359869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 41492472 - 41492531
Alignment:
Q  214 ttggtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtcc 272  Q
    ||||||||||||| ||| ||||||||||| ||||||||||| | ||||||||||||||||    
T  41492472 ttggtcaagtaacctagtggctagaattcacctttttcaaggtaaataagtggggtgtcc 41492531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 283
Target Start/End: Complemental strand, 29785240 - 29785202
Alignment:
Q  245 tttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  29785240 tttttcaaggtgaataagtggggtgtccggggttcgaac 29785202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 21023346 - 21023395
Alignment:
Q  235 tagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||||| ||||||||||| ||||||||||||||||| |||||||||||    
T  21023346 tagaattcacctttttcaaggtgaataagtggggtgtcgggggttcgaac 21023395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 12585550 - 12585602
Alignment:
Q  232 ggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| ||||||||||| |||||||||| ||||| ||||||||||||    
T  12585550 ggctagaattcacctttttcaagatgaataagtgaggtgttcggggttcgaac 12585602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 24039988 - 24039936
Alignment:
Q  232 ggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| ||||||||||| |||||||||| ||||| ||||||||||||    
T  24039988 ggctagaattcacctttttcaaggtgaataagtgaggtgttcggggttcgaac 24039936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 32690212 - 32690160
Alignment:
Q  232 ggctagaattccctt-tttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| ||| ||||||| |||||||||||||||| ||||||||||||    
T  32690212 ggctagaattctcttctttcaagatgaataagtggggtgttcggggttcgaac 32690160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 283
Target Start/End: Original strand, 42411418 - 42411497
Alignment:
Q  204 tttttctttattggtcaagtaacttagcggctagaa-ttccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||| ||| ||||||||||| | ||| |||||||| ||| |||||| ||| | |||||||||||||||||||||||||||    
T  42411418 ttttttttttttggtcaagtagcctagtggctagaaattcactttttaaag-taaataagtggggtgtccggggttcgaac 42411497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 283
Target Start/End: Original strand, 21476046 - 21476124
Alignment:
Q  204 tttttctttattggtcaagtaacttagcggctagaattccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||| ||| ||||||||||| | ||| ||||||||||| |||| | ||| |||||||||||| ||||||| ||||||||    
T  21476046 ttttttttttttggtcaagtagcctagtggctagaattcactttat-aagatgaataagtgggatgtccggagttcgaac 21476124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 283
Target Start/End: Complemental strand, 41346845 - 41346807
Alignment:
Q  245 tttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  41346845 tttttgaagctgaataagtgggatgtccggggttcgaac 41346807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 283
Target Start/End: Complemental strand, 49319483 - 49319445
Alignment:
Q  245 tttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||| |||||||||||||||||||||||| ||||    
T  49319483 tttttcaaggtgaataagtggggtgtccggggttggaac 49319445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 283
Target Start/End: Original strand, 7768783 - 7768831
Alignment:
Q  234 ctagaattccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||||| | ||||| ||| |||||||||||||||||||||||||||||    
T  7768783 ctagaatttcatttttaaag-tgaataagtggggtgtccggggttcgaac 7768831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 283
Target Start/End: Complemental strand, 30616100 - 30616052
Alignment:
Q  234 ctagaattccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||| |||||| ||| |||||||||||||||||||||| ||||||    
T  30616100 ctagaattcactttttaaag-tgaataagtggggtgtccggggctcgaac 30616052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 3465663 - 3465635
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  3465663 tgaataagtggggtgtccggggttcgaac 3465635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 8690294 - 8690266
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  8690294 tgaataagtggggtgtccggggttcgaac 8690266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 9693042 - 9693014
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  9693042 tgaataagtggggtgtccggggttcgaac 9693014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 10757790 - 10757818
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  10757790 tgaataagtggggtgtccggggttcgaac 10757818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 10970961 - 10970989
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  10970961 tgaataagtggggtgtccggggttcgaac 10970989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 11491234 - 11491262
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  11491234 tgaataagtggggtgtccggggttcgaac 11491262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 12856264 - 12856236
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  12856264 tgaataagtggggtgtccggggttcgaac 12856236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 14149873 - 14149845
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  14149873 tgaataagtggggtgtccggggttcgaac 14149845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 20610843 - 20610791
Alignment:
Q  232 ggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| ||||||| ||| |||||||||||| ||||||| ||||||||    
T  20610843 ggctagaattcaccttttttaaggtgaataagtgggatgtccggagttcgaac 20610791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 27862846 - 27862874
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  27862846 tgaataagtggggtgtccggggttcgaac 27862874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 28221322 - 28221350
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  28221322 tgaataagtggggtgtccggggttcgaac 28221350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 28520746 - 28520774
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  28520746 tgaataagtggggtgtccggggttcgaac 28520774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 34773698 - 34773726
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  34773698 tgaataagtggggtgtccggggttcgaac 34773726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 36576344 - 36576316
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  36576344 tgaataagtggggtgtccggggttcgaac 36576316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 37274660 - 37274632
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  37274660 tgaataagtggggtgtccggggttcgaac 37274632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 40406975 - 40407003
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  40406975 tgaataagtggggtgtccggggttcgaac 40407003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 43362183 - 43362211
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  43362183 tgaataagtggggtgtccggggttcgaac 43362211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 45350356 - 45350328
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  45350356 tgaataagtggggtgtccggggttcgaac 45350328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 45359835 - 45359807
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  45359835 tgaataagtggggtgtccggggttcgaac 45359807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 45847941 - 45847969
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  45847941 tgaataagtggggtgtccggggttcgaac 45847969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 46283202 - 46283174
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  46283202 tgaataagtggggtgtccggggttcgaac 46283174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 47017961 - 47017989
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  47017961 tgaataagtggggtgtccggggttcgaac 47017989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 48968225 - 48968253
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  48968225 tgaataagtggggtgtccggggttcgaac 48968253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 53815776 - 53815748
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  53815776 tgaataagtggggtgtccggggttcgaac 53815748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 54854170 - 54854222
Alignment:
Q  232 ggctagaattcccttttt-caagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| |||||| |||| |||||||||| | ||||||||||||||||    
T  54854170 ggctagaattcacttttttcaaggtgaataagtgtgatgtccggggttcgaac 54854222  T

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Target: scaffold0119 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 283
Target Start/End: Complemental strand, 1171 - 1091
Alignment:
Q  204 tttttctttattggtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||| ||| || ||||||||  |||| ||||||||||| ||||||||||| ||||||||||||||||| |||||||||||    
T  1171 tttttttttttttgtcaagtagtttagtggctagaattcacctttttcaaggtgaataagtggggtgtctggggttcgaac 1091  T

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Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 283
Target Start/End: Original strand, 26669622 - 26669702
Alignment:
Q  204 tttttctttattggtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||| ||| || ||||||||  |||| ||||||||||| ||||||||||| ||||||||||||||||| |||||||||||    
T  26669622 tttttttttttttgtcaagtagtttagtggctagaattcacctttttcaaggtgaataagtggggtgtctggggttcgaac 26669702  T

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Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 283
Target Start/End: Complemental strand, 17305648 - 17305569
Alignment:
Q  204 tttttctttattggtcaagtaacttagcggctagaattccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||| ||| ||||||||||| ||||| |  |||||||| |||||||||| |||||||||||||||||| || |||||||    
T  17305648 ttttttttttttggtcaagtagcttagtgattagaattcactttttcaaggtgaataagtggggtgtccaggattcgaac 17305569  T

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Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 220 - 283
Target Start/End: Original strand, 19680227 - 19680291
Alignment:
Q  220 aagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||| |||| | ||||||||| |||||||||||  ||||||||||||||||||||||||||||    
T  19680227 aagtaatttagtgtctagaattcacctttttcaaggagaataagtggggtgtccggggttcgaac 19680291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 30833121 - 30833069
Alignment:
Q  232 ggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||||||||||    
T  30833121 ggctagaattctcctttttcaaggagaataagtggggtgtccggggttcgaac 30833069  T

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Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 283
Target Start/End: Complemental strand, 12089227 - 12089149
Alignment:
Q  204 tttttctttattggtcaagtaacttagcggctagaattccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||| ||||||| ||| | ||| ||||||||||| | || | ||| |||||||||||||||||||||||||||||    
T  12089227 tttttcttttttggtcaggtatcctagtggctagaattcaccttat-aaggtgaataagtggggtgtccggggttcgaac 12089149  T

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Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 283
Target Start/End: Complemental strand, 9422950 - 9422885
Alignment:
Q  220 aagtaacttagcggctagaattc-cctttt-tcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||| ||||| ||||||||||| |||||| ||||| |||||||||||||||||||| ||||||||    
T  9422950 aagtagcttagtggctagaattcaccttttatcaaggtgaataagtggggtgtccggtgttcgaac 9422885  T

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Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 7234069 - 7234021
Alignment:
Q  232 ggctagaattc-cctttttcaagctgaataagtggggtgtccggggttc 279  Q
    ||||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  7234069 ggctagaattcacctttttcaaggtgaataagtggggtgtccgaggttc 7234021  T

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Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 20149973 - 20150023
Alignment:
Q  235 tagaattc-cctttttcaagctgaataagtggggtgtcc-ggggttcgaac 283  Q
    |||||||| ||||||||||| |||||||||||||||||| |||||||||||    
T  20149973 tagaattcacctttttcaaggtgaataagtggggtgtccaggggttcgaac 20150023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 283
Target Start/End: Complemental strand, 22182859 - 22182809
Alignment:
Q  235 tagaattc-cctttttcaagctgaataagtggggtgtcc-ggggttcgaac 283  Q
    |||||||| ||||||||||| |||||||||||||||||| |||||||||||    
T  22182859 tagaattcacctttttcaaggtgaataagtggggtgtccaggggttcgaac 22182809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 283
Target Start/End: Complemental strand, 24257006 - 24256968
Alignment:
Q  245 tttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  24257006 tttttcaaggtgaataagtggggtatccggggttcgaac 24256968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 283
Target Start/End: Original strand, 25020494 - 25020571
Alignment:
Q  205 ttttctttattggtcaagtaacttagcggctagaattccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||| ||| ||||||| ||| | ||| ||||||||||| | || | ||| |||||||||||||||||||||||||||||    
T  25020494 tttttttttttggtcaggtagcctagtggctagaattcaccttat-aaggtgaataagtggggtgtccggggttcgaac 25020571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 8309254 - 8309217
Alignment:
Q  245 tttttcaagctgaataagtggggtgtccggggttcgaa 282  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  8309254 tttttcaaggtgaataggtggggtgtccggggttcgaa 8309217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 3448432 - 3448404
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  3448432 tgaataagtggggtgtccggggttcgaac 3448404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 4854321 - 4854349
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  4854321 tgaataagtggggtgtccggggttcgaac 4854349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 6144044 - 6144016
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  6144044 tgaataagtggggtgtccggggttcgaac 6144016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 6228275 - 6228303
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  6228275 tgaataagtggggtgtccggggttcgaac 6228303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 7720518 - 7720546
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  7720518 tgaataagtggggtgtccggggttcgaac 7720546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 9051282 - 9051334
Alignment:
Q  232 ggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| |||||||||||  ||||||||| | ||||||||||||||||    
T  9051282 ggctagaattctcctttttcaagacgaataagtgagttgtccggggttcgaac 9051334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 9491750 - 9491778
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  9491750 tgaataagtggggtgtccggggttcgaac 9491778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 17751352 - 17751380
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  17751352 tgaataagtggggtgtccggggttcgaac 17751380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 18903382 - 18903410
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  18903382 tgaataagtggggtgtccggggttcgaac 18903410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 20415577 - 20415605
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  20415577 tgaataagtggggtgtccggggttcgaac 20415605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 22983660 - 22983632
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  22983660 tgaataagtggggtgtccggggttcgaac 22983632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 23804748 - 23804776
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  23804748 tgaataagtggggtgtccggggttcgaac 23804776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 29284198 - 29284170
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  29284198 tgaataagtggggtgtccggggttcgaac 29284170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 29430306 - 29430346
Alignment:
Q  243 cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||| ||| ||||||||||||||||||| |||||||||    
T  29430306 cctttttaaaggtgaataagtggggtgtccgaggttcgaac 29430346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 33628956 - 33628984
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  33628956 tgaataagtggggtgtccggggttcgaac 33628984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 34524979 - 34524927
Alignment:
Q  232 ggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| |||||||| || |||||||||||||||| ||||| ||||||    
T  34524979 ggctagaattcacctttttccaggtgaataagtggggtgttcggggctcgaac 34524927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 283
Target Start/End: Complemental strand, 10106762 - 10106682
Alignment:
Q  204 tttttctttattggtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||| ||| ||||||||||| | ||  ||||||||||  ||||||||||| |||||||||||||||||||||||||||||    
T  10106762 ttttttttttttggtcaagtagcctaatggctagaatttgcctttttcaagatgaataagtggggtgtccggggttcgaac 10106682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 283
Target Start/End: Complemental strand, 28537267 - 28537187
Alignment:
Q  204 tttttctttattggtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||| ||| || |||||||| | ||| ||||||||||| || |||||||  |||||||||||||||||||||||||||||    
T  28537267 tttttttttttttgtcaagtagcctagtggctagaattcaccattttcaaagtgaataagtggggtgtccggggttcgaac 28537187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 31556922 - 31556870
Alignment:
Q  232 ggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| || |||||||| |||||||||||||||||||||||||||||    
T  31556922 ggctagaattcacccttttcaaggtgaataagtggggtgtccggggttcgaac 31556870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 10943818 - 10943768
Alignment:
Q  232 ggctagaattccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| |||||| ||| |||||||||||||||||||||||||||||    
T  10943818 ggctagaattcactttttaaag-tgaataagtggggtgtccggggttcgaac 10943768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 22396980 - 22397031
Alignment:
Q  233 gctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||| || |||||||| |||||||||||||||||||||||||||||    
T  22396980 gctagaattcacccttttcaagatgaataagtggggtgtccggggttcgaac 22397031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 27006459 - 27006392
Alignment:
Q  217 gtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||||| | || |||||||||||| ||||||||||| ||||||||||| |||||||| ||||||||    
T  27006459 gtcaagtagcctaacggctagaattcacctttttcaaggtgaataagtggagtgtccggagttcgaac 27006392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 279
Target Start/End: Original strand, 37986844 - 37986906
Alignment:
Q  218 tcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttc 279  Q
    ||||||| | ||| ||||||||||| ||||||||||| |||||||||||| ||||||||||||    
T  37986844 tcaagtagcctagtggctagaattcacctttttcaaggtgaataagtgggatgtccggggttc 37986906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 40384360 - 40384303
Alignment:
Q  227 ttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||| ||||||||||| ||||||| ||| |||||||||||||||||||| ||||||||    
T  40384360 ttagtggctagaattcaccttttttaaggtgaataagtggggtgtccggagttcgaac 40384303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 283
Target Start/End: Original strand, 1244692 - 1244770
Alignment:
Q  204 tttttctttattggtcaagtaacttagcggctagaattccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||| | ||||| ||||| ||| ||||||||||| | || | ||| ||||||||||||||||| |||||||||||    
T  1244692 tttttctttctgggtcaggtaacctagtggctagaattcaccttat-aaggtgaataagtggggtgtctggggttcgaac 1244770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 11246485 - 11246532
Alignment:
Q  232 ggctagaattc-cctttttcaagctgaataagtggggtgtccggggtt 278  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||||||    
T  11246485 ggctagaattcacctttttcaagctgaataagtgggatgtctggggtt 11246532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 283
Target Start/End: Original strand, 3535941 - 3535979
Alignment:
Q  245 tttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||| ||| |||||||||||||||||||||||||||||    
T  3535941 ttttttaaggtgaataagtggggtgtccggggttcgaac 3535979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 234 - 283
Target Start/End: Complemental strand, 41539416 - 41539366
Alignment:
Q  234 ctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||| ||||||||||| | ||||||||||||||| |||||||||||    
T  41539416 ctagaattcacctttttcaagattaataagtggggtgtctggggttcgaac 41539366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Original strand, 15106893 - 15106930
Alignment:
Q  246 ttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||| ||| |||||||||||||||||||||||||||||    
T  15106893 ttttaaagatgaataagtggggtgtccggggttcgaac 15106930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 22687875 - 22687920
Alignment:
Q  235 tagaattc-cctttttcaagctgaataagtggggtgtccggggttc 279  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||    
T  22687875 tagaattcacctttttcaaggtgaataagtggggtgttcggggttc 22687920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 283
Target Start/End: Complemental strand, 29561749 - 29561700
Alignment:
Q  235 tagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||||| ||||||||||| |||||||||||| |||| |||||||||||    
T  29561749 tagaattcacctttttcaagatgaataagtgggatgtctggggttcgaac 29561700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 843383 - 843411
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  843383 tgaataagtggggtgtccggggttcgaac 843411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 1463951 - 1463923
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  1463951 tgaataagtggggtgtccggggttcgaac 1463923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 4674830 - 4674858
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  4674830 tgaataagtggggtgtccggggttcgaac 4674858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 8015915 - 8015887
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  8015915 tgaataagtggggtgtccggggttcgaac 8015887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 29096323 - 29096351
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  29096323 tgaataagtggggtgtccggggttcgaac 29096351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 31250227 - 31250199
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  31250227 tgaataagtggggtgtccggggttcgaac 31250199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 35168647 - 35168675
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  35168647 tgaataagtggggtgtccggggttcgaac 35168675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 36045149 - 36045177
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  36045149 tgaataagtggggtgtccggggttcgaac 36045177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 38503272 - 38503300
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  38503272 tgaataagtggggtgtccggggttcgaac 38503300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 38618696 - 38618724
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  38618696 tgaataagtggggtgtccggggttcgaac 38618724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 43227946 - 43227918
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  43227946 tgaataagtggggtgtccggggttcgaac 43227918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 1244673 - 1244621
Alignment:
Q  232 ggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  1244673 ggctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaac 1244621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 12206602 - 12206550
Alignment:
Q  232 ggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| ||||||||||| |||||||| ||||||| ||||||||||||    
T  12206602 ggctagaattcacctttttcaaggtgaataagcggggtgttcggggttcgaac 12206550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 11133193 - 11133128
Alignment:
Q  217 gtcaagtaacttagcggctagaattccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||| ||||| ||| ||||||||||| | || | ||| |||||||||||||||||||||||||||||    
T  11133193 gtcaggtaacctagtggctagaattcaccttat-aaggtgaataagtggggtgtccggggttcgaac 11133128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 283
Target Start/End: Complemental strand, 32288466 - 32288428
Alignment:
Q  245 tttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  32288466 tttttcaaggtgaataagtggggtgtccgaggttcgaac 32288428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 283
Target Start/End: Complemental strand, 2057580 - 2057531
Alignment:
Q  235 tagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||||| ||||||| ||| ||||||||||||||||||||| |||||||    
T  2057580 tagaattcaccttttttaaggtgaataagtggggtgtccgggattcgaac 2057531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 44487761 - 44487810
Alignment:
Q  235 tagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||||| ||||||| ||| |||||||||||| ||||||||||||||||    
T  44487761 tagaattcaccttttttaaggtgaataagtgggatgtccggggttcgaac 44487810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 580798 - 580826
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  580798 tgaataagtggggtgtccggggttcgaac 580826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 3037637 - 3037665
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  3037637 tgaataagtggggtgtccggggttcgaac 3037665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 3330216 - 3330244
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  3330216 tgaataagtggggtgtccggggttcgaac 3330244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 4157664 - 4157692
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  4157664 tgaataagtggggtgtccggggttcgaac 4157692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 8234807 - 8234835
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  8234807 tgaataagtggggtgtccggggttcgaac 8234835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 9796977 - 9796949
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  9796977 tgaataagtggggtgtccggggttcgaac 9796949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 10602125 - 10602057
Alignment:
Q  217 gtcaagtaacttagcggctagaattcc-ctttttcaagctgaataagtggggtgtccg-gggttcgaac 283  Q
    |||| ||||| ||| |||||||||||  |||||||||  ||||||||||||||||||| ||||||||||    
T  10602125 gtcaggtaacctagtggctagaattcatctttttcaaagtgaataagtggggtgtccgtgggttcgaac 10602057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 17154729 - 17154701
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  17154729 tgaataagtggggtgtccggggttcgaac 17154701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 283
Target Start/End: Complemental strand, 18089849 - 18089781
Alignment:
Q  216 ggtcaagtaacttagcggctagaattccc-tttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||| |||| ||| | ||||||||| | ||||||||| |||||||||| |||||| |||||||||||    
T  18089849 ggtcaattaacctagtgactagaattcacgtttttcaaggtgaataagtgaggtgtctggggttcgaac 18089781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 25406653 - 25406693
Alignment:
Q  243 cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||| |||| |||||||||||||||||||| ||||||||    
T  25406653 ccttttccaaggtgaataagtggggtgtccggagttcgaac 25406693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 29035056 - 29035028
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  29035056 tgaataagtggggtgtccggggttcgaac 29035028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 33613620 - 33613648
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  33613620 tgaataagtggggtgtccggggttcgaac 33613648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 34034430 - 34034402
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  34034430 tgaataagtggggtgtccggggttcgaac 34034402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 34107378 - 34107326
Alignment:
Q  232 ggctagaattccc-tttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| | ||||||||| ||||||||||||||||| || ||||||||    
T  34107378 ggctagaattcacatttttcaaggtgaataagtggggtgtctggagttcgaac 34107326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 36413852 - 36413812
Alignment:
Q  243 cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||  |||||||||||||||||| ||||||||||    
T  36413852 cctttttcaaagtgaataagtggggtgtccagggttcgaac 36413812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 36520795 - 36520823
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  36520795 tgaataagtggggtgtccggggttcgaac 36520823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 42678339 - 42678367
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  42678339 tgaataagtggggtgtccggggttcgaac 42678367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 44422187 - 44422159
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  44422187 tgaataagtggggtgtccggggttcgaac 44422159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 28951988 - 28951918
Alignment:
Q  214 ttggtcaagtaacttagcggctagaattccc-tttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||||||||  || |||||||| | ||||||||| |||||||||||||||| ||||||||||||    
T  28951988 ttggtcaagtaacttaatggttagaattcacatttttcaaggtgaataagtggggtgttcggggttcgaac 28951918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 32080160 - 32080107
Alignment:
Q  231 cggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||| ||||||||||| |||||||||||||||| ||||||||||||    
T  32080160 cggctagaattcacctttttcaaggtgaataagtggggtgttcggggttcgaac 32080107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 3955415 - 3955360
Alignment:
Q  227 ttagcggctagaattccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||| ||||||||||| |||||| ||| |||||||||||||||||||||||||||||    
T  3955415 ttagtggctagaattcactttttaaag-tgaataagtggggtgtccggggttcgaac 3955360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 283
Target Start/End: Complemental strand, 14417998 - 14417920
Alignment:
Q  204 tttttctttattggtcaagtaacttagcggctagaattccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||| ||| ||||||| ||| ||||| ||||||||||| | || | ||| |||||||||||||||||||||||||||||    
T  14417998 ttttttttttttggtcaggtagcttagtggctagaattcaccttat-aaggtgaataagtggggtgtccggggttcgaac 14417920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 36331719 - 36331769
Alignment:
Q  232 ggctagaattccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| |||||| ||| |||||||||||||||||||||||||||||    
T  36331719 ggctagaattcactttttaaag-tgaataagtggggtgtccggggttcgaac 36331769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 279
Target Start/End: Complemental strand, 40160853 - 40160791
Alignment:
Q  218 tcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttc 279  Q
    ||||||| | ||| ||||||||||| ||||||| ||| |||||||||||||||||||||||||    
T  40160853 tcaagtagcctagtggctagaattcacctttttaaaggtgaataagtggggtgtccggggttc 40160791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 4045620 - 4045677
Alignment:
Q  227 ttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||| |||||||| ||||||||||| |||||||||||||||||||  ||||||||    
T  4045620 ttagcggttagaattcacctttttcaagatgaataagtggggtgtccgaagttcgaac 4045677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 283
Target Start/End: Complemental strand, 17262320 - 17262271
Alignment:
Q  235 tagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  17262320 tagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaac 17262271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 36727438 - 36727506
Alignment:
Q  214 ttggtcaagtaacttagcggctagaattccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||| ||||||||| ||||||||||| | || | ||| ||||||||||||||||||| |||||||||    
T  36727438 ttggtcaggtaacttagtggctagaattcaccttat-aagatgaataagtggggtgtccgaggttcgaac 36727506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 21248981 - 21249033
Alignment:
Q  232 ggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| ||||||||||| |||||||||||||||| | ||||||||||    
T  21248981 ggctagaattcacctttttcaaggtgaataagtggggtgttcagggttcgaac 21249033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 24130650 - 24130615
Alignment:
Q  244 ctttttcaagctgaataagtggggtgtccggggttc 279  Q
    |||||||||| |||||||||||||||||||||||||    
T  24130650 ctttttcaaggtgaataagtggggtgtccggggttc 24130615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 40956663 - 40956730
Alignment:
Q  217 gtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||  |||| || |||||||| ||||||| ||||||||||| || ||||||||||||||||||    
T  40956663 gtcaagtagtttagtggttagaattcaccttttttaagctgaataaatgaggtgtccggggttcgaac 40956730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 50724469 - 50724419
Alignment:
Q  232 ggctagaattccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| |||||| ||| ||||||||||||||||||| |||||||||    
T  50724469 ggctagaattcacttttt-aaggtgaataagtggggtgtccgaggttcgaac 50724419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 50788379 - 50788429
Alignment:
Q  232 ggctagaattccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| |||||| ||| ||||||||||||||||||| |||||||||    
T  50788379 ggctagaattcacttttt-aaggtgaataagtggggtgtccgaggttcgaac 50788429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 283
Target Start/End: Original strand, 16893450 - 16893488
Alignment:
Q  245 tttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  16893450 tttttcaaggtaaataagtggggtgtccggggttcgaac 16893488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 32508772 - 32508837
Alignment:
Q  217 gtcaagtaacttagcggctagaattccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||| ||||||||| ||||||||||| | || | ||| |||||||||||||||| ||||||||||||    
T  32508772 gtcaggtaacttagtggctagaattcaccttat-aaggtgaataagtggggtgttcggggttcgaac 32508837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 283
Target Start/End: Original strand, 42665930 - 42665968
Alignment:
Q  245 tttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  42665930 tttttcaaggtgaataagtggggtgtccggagttcgaac 42665968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 282
Target Start/End: Original strand, 18201455 - 18201519
Alignment:
Q  217 gtcaagtaacttagcggctagaattccctttttcaagctgaataagtggggtgtccggggttcgaa 282  Q
    |||| ||||| ||||||||||||||| | || | ||| ||||||||| ||||||||||||||||||    
T  18201455 gtcaggtaacctagcggctagaattcaccttat-aaggtgaataagtagggtgtccggggttcgaa 18201519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 281
Target Start/End: Original strand, 24136725 - 24136793
Alignment:
Q  214 ttggtcaagtaacttagcggctagaa-ttc-cctttttcaagctgaataagtggggtgtccggggttcga 281  Q
    ||||||||||| | ||| |||||||| ||| ||||||| ||| |||||||||||||||||||||||||||    
T  24136725 ttggtcaagtagcctagtggctagaaattcacctttttaaag-tgaataagtggggtgtccggggttcga 24136793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Original strand, 34407096 - 34407133
Alignment:
Q  246 ttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  34407096 ttttcaagatgaataagtggggtgtctggggttcgaac 34407133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 46328899 - 46328967
Alignment:
Q  214 ttggtcaagtaacttagcggctagaattccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||| ||| | ||| ||||||||||| | || | ||| |||||||||||||||||||||||||||||    
T  46328899 ttggtcaggtagcctagtggctagaattcaccttat-aaggtgaataagtggggtgtccggggttcgaac 46328967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 49639148 - 49639080
Alignment:
Q  214 ttggtcaagtaacttagcggctagaattccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||| ||||| ||| ||||||||||| | ||  |||| |||||||||||||||| ||||||||||||    
T  49639148 ttggtcaggtaacctagtggctagaattcacctta-caaggtgaataagtggggtgttcggggttcgaac 49639080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 55318107 - 55318070
Alignment:
Q  245 tttttcaagctgaataagtggggtgtccggggttcgaa 282  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  55318107 tttttcaaagtgaataagtggggtgtccggggttcgaa 55318070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 2732743 - 2732715
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  2732743 tgaataagtggggtgtccggggttcgaac 2732715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 9625063 - 9625035
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  9625063 tgaataagtggggtgtccggggttcgaac 9625035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 10959213 - 10959185
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  10959213 tgaataagtggggtgtccggggttcgaac 10959185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 283
Target Start/End: Original strand, 11668276 - 11668312
Alignment:
Q  247 tttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  11668276 tttcaaggtgaataagtggggtgtccgtggttcgaac 11668312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 24537907 - 24537879
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  24537907 tgaataagtggggtgtccggggttcgaac 24537879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 24559469 - 24559441
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  24559469 tgaataagtggggtgtccggggttcgaac 24559441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 27066690 - 27066662
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  27066690 tgaataagtggggtgtccggggttcgaac 27066662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 27183696 - 27183724
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  27183696 tgaataagtggggtgtccggggttcgaac 27183724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 27471584 - 27471556
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  27471584 tgaataagtggggtgtccggggttcgaac 27471556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 29645842 - 29645870
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  29645842 tgaataagtggggtgtccggggttcgaac 29645870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 31108763 - 31108803
Alignment:
Q  243 cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| |||||||||||||||||  ||||||||||    
T  31108763 cctttttcaaggtgaataagtggggtgtctcgggttcgaac 31108803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 33206837 - 33206809
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  33206837 tgaataagtggggtgtccggggttcgaac 33206809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 39946596 - 39946540
Alignment:
Q  227 ttagcggctagaattccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||| ||||||||||| |||||||||   ||||||||||||||| ||| ||||||||    
T  39946596 ttagtggctagaattctctttttcaacgagaataagtggggtgttcggagttcgaac 39946540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 45431707 - 45431679
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  45431707 tgaataagtggggtgtccggggttcgaac 45431679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 47864716 - 47864688
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  47864716 tgaataagtggggtgtccggggttcgaac 47864688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 49146164 - 49146136
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  49146164 tgaataagtggggtgtccggggttcgaac 49146136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 49429540 - 49429512
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  49429540 tgaataagtggggtgtccggggttcgaac 49429512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 26657975 - 26657908
Alignment:
Q  217 gtcaagtaacttagcggctagaattccctttttcaagctgaataagt-ggggtgtccggggttcgaac 283  Q
    |||||||| ||||| |||| |||||| |||||||||| ||||||||| |||||||| |||||||||||    
T  26657975 gtcaagtagcttagtggcttgaattcactttttcaaggtgaataagtgggggtgtctggggttcgaac 26657908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 220335 - 220405
Alignment:
Q  214 ttggtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||   ||| || |||||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  220335 ttggtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaac 220405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 689490 - 689560
Alignment:
Q  214 ttggtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||   ||| || |||||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  689490 ttggtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaac 689560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 733958 - 734028
Alignment:
Q  214 ttggtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||   ||| || |||||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  733958 ttggtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaac 734028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 857854 - 857924
Alignment:
Q  214 ttggtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||   ||| || |||||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  857854 ttggtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaac 857924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 17467366 - 17467329
Alignment:
Q  246 ttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||||| |||||||||||||||||||||||||||||    
T  17467366 ttttcaaggtgaataagtggggtgtccggggttcgaac 17467329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 283
Target Start/End: Complemental strand, 35779885 - 35779805
Alignment:
Q  204 tttttctttattggtcaagtaacttagcggctagaattcc-ctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||| ||| || ||||||||  |||| |||||||||||  |||||||||| ||||||||||||||||||  |||||||||    
T  35779885 tttttttttttttgtcaagtagtttagaggctagaattcatctttttcaagatgaataagtggggtgtcctaggttcgaac 35779805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 283
Target Start/End: Complemental strand, 16935677 - 16935639
Alignment:
Q  245 tttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||| ||||||||||||||||| |||||||||||    
T  16935677 tttttcaagttgaataagtggggtgtctggggttcgaac 16935639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 18123983 - 18123913
Alignment:
Q  214 ttggtcaagtaacttagcggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||||  ||||||||||||||| ||||||| |||  ||||||||||||||| |  |||||||||    
T  18123983 ttggtcaagtaatctagcggctagaattcaccttttttaaggagaataagtggggtgtacatggttcgaac 18123913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 283
Target Start/End: Original strand, 33570395 - 33570472
Alignment:
Q  205 ttttctttattggtcaagtaacttagcggctagaattccctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    |||||||| || ||||||||  |||| ||||||||||| | || | ||| ||||||||||||||||||| |||||||||    
T  33570395 ttttctttttttgtcaagtagtttagtggctagaattcaccttat-aaggtgaataagtggggtgtccgaggttcgaac 33570472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 4798551 - 4798584
Alignment:
Q  250 caagctgaataagtggggtgtccggggttcgaac 283  Q
    |||| |||||||||||||||||||||||||||||    
T  4798551 caaggtgaataagtggggtgtccggggttcgaac 4798584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 1360149 - 1360177
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  1360149 tgaataagtggggtgtccggggttcgaac 1360177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 2696613 - 2696585
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  2696613 tgaataagtggggtgtccggggttcgaac 2696585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 2800099 - 2800071
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  2800099 tgaataagtggggtgtccggggttcgaac 2800071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 3311520 - 3311492
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  3311520 tgaataagtggggtgtccggggttcgaac 3311492  T

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Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 7314813 - 7314785
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  7314813 tgaataagtggggtgtccggggttcgaac 7314785  T

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Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 12926481 - 12926521
Alignment:
Q  243 cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| |||||||||| |||||||||| |||||||    
T  12926481 cctttttcaagatgaataagtgaggtgtccgggattcgaac 12926521  T

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Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 14010787 - 14010815
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  14010787 tgaataagtggggtgtccggggttcgaac 14010815  T

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Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 15042380 - 15042408
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  15042380 tgaataagtggggtgtccggggttcgaac 15042408  T

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Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 17855729 - 17855701
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  17855729 tgaataagtggggtgtccggggttcgaac 17855701  T

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Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 19957336 - 19957364
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  19957336 tgaataagtggggtgtccggggttcgaac 19957364  T

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Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 25470837 - 25470889
Alignment:
Q  232 ggctagaattc-cctttttcaagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||||||||| |||| |||||| ||||||| ||||||||||| |||||||||    
T  25470837 ggctagaattcaccttcttcaaggtgaataaatggggtgtccgaggttcgaac 25470889  T

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Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 31129382 - 31129354
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  31129382 tgaataagtggggtgtccggggttcgaac 31129354  T

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Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 33524476 - 33524448
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  33524476 tgaataagtggggtgtccggggttcgaac 33524448  T

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Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 34073254 - 34073282
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  34073254 tgaataagtggggtgtccggggttcgaac 34073282  T

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Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 41454842 - 41454870
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  41454842 tgaataagtggggtgtccggggttcgaac 41454870  T

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Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 43456667 - 43456695
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  43456667 tgaataagtggggtgtccggggttcgaac 43456695  T

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Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 45536798 - 45536770
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  45536798 tgaataagtggggtgtccggggttcgaac 45536770  T

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Target: scaffold0054 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 283
Target Start/End: Complemental strand, 67271 - 67213
Alignment:
Q  226 cttagcggctagaattcccttttt-caagctgaataagtggggtgtccggggttcgaac 283  Q
    ||||| ||||||||||| |||||| |||| ||| |||||||||||||| ||||||||||    
T  67271 cttagtggctagaattcacttttttcaaggtgattaagtggggtgtccagggttcgaac 67213  T

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Target: scaffold0334 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 5383 - 5355
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  5383 tgaataagtggggtgtccggggttcgaac 5355  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 25106 - 25078
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  25106 tgaataagtggggtgtccggggttcgaac 25078  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 419792 - 419764
Alignment:
Q  255 tgaataagtggggtgtccggggttcgaac 283  Q
    |||||||||||||||||||||||||||||    
T  419792 tgaataagtggggtgtccggggttcgaac 419764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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