View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1883-Insertion-11 (Length: 699)
Name: NF1883-Insertion-11
Description: NF1883
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1883-Insertion-11 |
 | |
|
| [»] scaffold0182 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 531; Significance: 0; HSPs: 25)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 531; E-Value: 0
Query Start/End: Original strand, 8 - 697
Target Start/End: Original strand, 21786679 - 21787381
Alignment:
| Q |
8 |
aaaaggtcaagatgatgacataccggaacatacaagatctaagagctgtaggaataagacttaagtcaagcaagacgcgaaggccaagagacatagattt |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
21786679 |
aaaaggtcaagatgatgacataccggaacatacaagatctaagagctgtaggaataagacttaagtcaagcaagacacgaaggccaagagacatagattt |
21786778 |
T |
|
| Q |
108 |
ctccgaaggattgttcgccgcagaactgactcttcctgagatcgttgtggacgacacatcagccgctactttccttaacctgatagcatatgagatgtgt |
207 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
21786779 |
ctccgaaggattgttcgctgcagaactgactcttcctgagatcgttgtggacgacacttcagccgctactttcctcaacctgatagcatatgagatgtgt |
21786878 |
T |
|
| Q |
208 |
ccagattttgacaacgactacgggatttgttcttttgcagctttcatggactcgcttatcgacaatcctgaagatgtcaagttactaagatcaaaaggga |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21786879 |
ccagattttgacaacgactacgggatttgttcttttgcagctttcatggactcgcttatcgacaatcctgaagatgtcaagttactaagatcaaaaggga |
21786978 |
T |
|
| Q |
308 |
ttttgctcaattcccttgggagtgatgaggaagttgctgaacttttcaatatcataagtactgacttggtacctaactcagaaacatattttgaagttag |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21786979 |
ttttgctcaattcccttgggagtgatgaggaagttgctgaacttttcaatatcataagtactgacttggtacctaactcagaaacatattttgaagttag |
21787078 |
T |
|
| Q |
408 |
agccaaaatacatgatcattaccgtaatagatgcaatacatggatggcgctgggatttcacacttacttcagcagtccttgggccattattgcattcatt |
507 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||| || ||| ||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
21787079 |
agccaaaatacatgatcattattgtaatagatgcaatacatggatagcagagggttttcacacttacttcagcaatccttgggccattattgcattcatt |
21787178 |
T |
|
| Q |
508 |
gctgcgtttaccgcccttgttcttactttcattcagacatggtttgcaattaatccggcttgctgataaaggtggttcgttatagcaatgttgctttcat |
607 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| ||||||||| | |||| |||||| || |||||||||||||||||| |||||||||||||||| |
|
|
| T |
21787179 |
gctgcgtttactgcccttgttcttactttcattcaaacatggtttacggttaacccggctagcaaataaaggtggttcgttatggcaatgttgctttcat |
21787278 |
T |
|
| Q |
608 |
acgaataaaatttcgtaac-------------gtttgagttggtaatgcaccacgcataataattgccttctggtaaggcaagtagtgtacttcacttct |
694 |
Q |
| |
|
|| | ||||| |||||||| || || ||||||| |||||| |||||||||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
21787279 |
acaattaaaaattcgtaacaaaaataggtcgagtatgtgttggtattgcaccgtgcataataattgtcttctggtaaggcaagtagtgtactttacttct |
21787378 |
T |
|
| Q |
695 |
ctg |
697 |
Q |
| |
|
||| |
|
|
| T |
21787379 |
ctg |
21787381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 413; E-Value: 0
Query Start/End: Original strand, 8 - 552
Target Start/End: Original strand, 21773151 - 21773695
Alignment:
| Q |
8 |
aaaaggtcaagatgatgacataccggaacatacaagatctaagagctgtaggaataagacttaagtcaagcaagacgcgaaggccaagagacatagattt |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
21773151 |
aaaaggtcaagatgatgacataccggaacatacaagatctaagagatgtaggaataaattttaagtcaagcaagacgagaaggccaagagacatagattt |
21773250 |
T |
|
| Q |
108 |
ctccgaaggattgttcgccgcagaactgactcttcctgagatcgttgtggacgacacatcagccgctactttccttaacctgatagcatatgagatgtgt |
207 |
Q |
| |
|
||| |||||||||||| | ||||||||||||||||||||||| |||||||||||| |||||||| |||| ||||| |||||||||||||||||||||||| |
|
|
| T |
21773251 |
ctctgaaggattgttcactgcagaactgactcttcctgagattgttgtggacgactcatcagccactacattcctcaacctgatagcatatgagatgtgt |
21773350 |
T |
|
| Q |
208 |
ccagattttgacaacgactacgggatttgttcttttgcagctttcatggactcgcttatcgacaatcctgaagatgtcaagttactaagatcaaaaggga |
307 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||| || |
|
|
| T |
21773351 |
ccagattttcataacgactacgggatttgttcttttgcagcgttcatggactcgcttatcgacaatcctgaagatgtgaagttactgagatcaaaagaga |
21773450 |
T |
|
| Q |
308 |
ttttgctcaattcccttgggagtgatgaggaagttgctgaacttttcaatatcataagtactgacttggtacctaactcagaaacatattttgaagttag |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| || ||||| |
|
|
| T |
21773451 |
ttttgctcaattcccttgggagtgatgaggaagttgctgaacttttcaatatcataagtactgacttggtacctaatgcagacacatatttagaggttag |
21773550 |
T |
|
| Q |
408 |
agccaaaatacatgatcattaccgtaatagatgcaatacatggatggcgctgggatttcacacttacttcagcagtccttgggccattattgcattcatt |
507 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21773551 |
agccaaaatacatgatcattaccgtaatagatgcaatacatggatagcgcagggttttcgcacttacttcagcagtccttgggccattattgcattcatt |
21773650 |
T |
|
| Q |
508 |
gctgcgtttaccgcccttgttcttactttcattcagacatggttt |
552 |
Q |
| |
|
||||| | | ||| |||||||||||||||||||||||||||||| |
|
|
| T |
21773651 |
gctgctctcatcgcgcttgttcttactttcattcagacatggttt |
21773695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 13 - 604
Target Start/End: Original strand, 21789442 - 21790033
Alignment:
| Q |
13 |
gtcaagatgatgacataccggaacatacaagatctaagagctgtaggaataagacttaagtcaagcaagacgcgaaggccaagagacatagatttctccg |
112 |
Q |
| |
|
|||||||||||||||||| ||| |||||||||||||||||| || |||||||||||||||||||| ||| || ||||||| |||| |||||||||| | |
|
|
| T |
21789442 |
gtcaagatgatgacatacaggagcatacaagatctaagagcagtcggaataagacttaagtcaagtgcgacacggaggccaacagacgtagatttctctg |
21789541 |
T |
|
| Q |
113 |
aaggattgttcgccgcagaactgactcttcctgagatcgttgtggacgacacatcagccgctactttccttaacctgatagcatatgagatgtgtccaga |
212 |
Q |
| |
|
||||| |||||| || |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
21789542 |
caggatggttcgctgcgaaactgactcttcctgagatcgttgtggacgacacttcagccgcaactttcctcaacctgatagcatatgagatgtgtccaga |
21789641 |
T |
|
| Q |
213 |
ttttgacaacgactacgggatttgttcttttgcagctttcatggactcgcttatcgacaatcctgaagatgtcaagttactaagatcaaaagggattttg |
312 |
Q |
| |
|
|||||| ||||||||||| |||||||| |||||||||||||||||||| || || ||| |||||||||||| ||| | | |||||||||||||||||| |
|
|
| T |
21789642 |
ttttgagaacgactacggaatttgttcgtttgcagctttcatggactcactcattgaccgtcctgaagatgtgaaggaattgagatcaaaagggattttg |
21789741 |
T |
|
| Q |
313 |
ctcaattcccttgggagtgatgaggaagttgctgaacttttcaatatcataagtactgacttggtacctaactcagaaacatattttgaagttagagcca |
412 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| || ||| |||||||||||| |||| | |
|
|
| T |
21789742 |
ctcaattcccttgggagtgatgaggaagttgccgattttttcaatatcataagtactgacttggtacctaatacaaaaatatattttgaagtcagagaaa |
21789841 |
T |
|
| Q |
413 |
aaatacatgatcattaccgtaatagatgcaatacatggatggcgctgggatttcacacttacttcagcagtccttgggccattattgcattcattgctgc |
512 |
Q |
| |
|
|||||||||| |||||| |||||| |||||| || ||||| |||||||| ||||||||||||||||| | |||||||||||||||||||||| ||||||| |
|
|
| T |
21789842 |
aaatacatgagcattactgtaataaatgcaagacttggatagcgctgggttttcacacttacttcagtaatccttgggccattattgcattccttgctgc |
21789941 |
T |
|
| Q |
513 |
gtttaccgcccttgttcttactttcattcagacatggtttgcaattaatccggcttgctgataaaggtggttcgttatagcaatgttgcttt |
604 |
Q |
| |
|
||||| |||||||| ||| ||||||||||| ||||||||||| || | |||||||||| ||||||||||| ||||| ||||||||||||| |
|
|
| T |
21789942 |
gtttatcgcccttgctctaactttcattcaaacatggtttgcggttgacccggcttgctagtaaaggtggtttgttatggcaatgttgcttt |
21790033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 8 - 429
Target Start/End: Original strand, 21717016 - 21717434
Alignment:
| Q |
8 |
aaaaggtcaagatgatgacataccggaacatacaagatctaagagctgtaggaataagacttaagtcaagcaagacgcgaaggccaagagacatagattt |
107 |
Q |
| |
|
|||||||||||||||| |||| ||||||| ||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
21717016 |
aaaaggtcaagatgat---atacacgaacataaaagatctaaaagcattaggaataagacttaagtcaagcaagacacgaaggccaagagacatagattt |
21717112 |
T |
|
| Q |
108 |
ctccgaaggattgttcgccgcagaactgactcttcctgagatcgttgtggacgacacatcagccgctactttccttaacctgatagcatatgagatgtgt |
207 |
Q |
| |
|
||||||||||| |||| | || ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
21717113 |
ctccgaaggatggttcactgctgaactgactcttcctgagatcgttgtggacgacacttcagccgctactttcctcaacctgattgcatatgagatgtgt |
21717212 |
T |
|
| Q |
208 |
ccagattttgacaacgactacgggatttgttcttttgcagctttcatggactcgcttatcgacaatcctgaagatgtcaagttactaagatcaaaaggga |
307 |
Q |
| |
|
||||||||| |||||||||| ||| ||||||||||||||||||| ||| |||||||||| || ||||||||||||| ||| |||| ||||||||||||| |
|
|
| T |
21717213 |
ccagattttaacaacgactatgggttttgttcttttgcagcttttatgtgctcgcttatcaaccatcctgaagatgtgaaggtactgagatcaaaaggga |
21717312 |
T |
|
| Q |
308 |
ttttgctcaattcccttgggagtgatgaggaagttgctgaacttttcaatatcataagtactgacttggtacctaactcagaaacatattttgaagttag |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
21717313 |
ttttgctcaattcccttgggagtgatgaggaagttgccgaacttttcaatatcataggttctgacttggtaccgaactcagaaacatattttgaagttaa |
21717412 |
T |
|
| Q |
408 |
agccaaaatacatgatcattac |
429 |
Q |
| |
|
||||||||| ||||||||||| |
|
|
| T |
21717413 |
agccaaaatgaatgatcattac |
21717434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 277; E-Value: 1e-154
Query Start/End: Original strand, 33 - 429
Target Start/End: Original strand, 21682965 - 21683361
Alignment:
| Q |
33 |
gaacatacaagatctaagagctgtaggaataagacttaagtcaagcaagacgcgaaggccaagagacatagatttctccgaaggattgttcgccgcagaa |
132 |
Q |
| |
|
||||||| ||||||||| ||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||| |||| | |||||| |
|
|
| T |
21682965 |
gaacataaaagatctaaaagcactaggaataagacttaagtcaagcaagacacgaaggccaaaagacatagatttcaccgaaggatggttcactgcagaa |
21683064 |
T |
|
| Q |
133 |
ctgactcttcctgagatcgttgtggacgacacatcagccgctactttccttaacctgatagcatatgagatgtgtccagattttgacaacgactacggga |
232 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| | |
|
|
| T |
21683065 |
ctaactcttcctgagatcgttgtggacgacacatcagccactactttcctcaacctgatagcatatgagatgtgtccaaattttgacaacgactacggaa |
21683164 |
T |
|
| Q |
233 |
tttgttcttttgcagctttcatggactcgcttatcgacaatcctgaagatgtcaagttactaagatcaaaagggattttgctcaattcccttgggagtga |
332 |
Q |
| |
|
|||||||||||| |||||| ||||||||||| |||||| ||||||||||||| ||| |||| ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
21683165 |
tttgttcttttgtagcttttatggactcgctcatcgaccatcctgaagatgtgaaggtactgagatcaaaaggaattttgctcaattcccttgggagtga |
21683264 |
T |
|
| Q |
333 |
tgaggaagttgctgaacttttcaatatcataagtactgacttggtacctaactcagaaacatattttgaagttagagccaaaatacatgatcattac |
429 |
Q |
| |
|
|||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
21683265 |
tgaggaagttgccgaacttttcaatatcataggtactgacttggtacctaacccagaaacatattttgaagttaaagccaaaatgattgatcattac |
21683361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 23 - 605
Target Start/End: Original strand, 21657742 - 21658324
Alignment:
| Q |
23 |
tgacataccggaacatacaagatctaagagctgtaggaataagacttaagtcaagcaagacgcgaaggccaagagacatagatttctccgaaggattgtt |
122 |
Q |
| |
|
|||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||| ||| | ||||| ||||||||||||||||| || ||||| ||| |
|
|
| T |
21657742 |
tgacatacaggaacatacaagatctaaaagcagtaggaataagacttaagtcaagcatgacacaaaggctaagagacatagatttctgcggaggatggtt |
21657841 |
T |
|
| Q |
123 |
cgccgcagaactgactcttcctgagatcgttgtggacgacacatcagccgctactttccttaacctgatagcatatgagatgtgtccagattttgacaac |
222 |
Q |
| |
|
| | |||||||||||||||||| |||| ||||| | ||| |||||| ||| |||| ||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
21657842 |
ctctgcagaactgactcttcctatgatcattgtgtccaacagttcagcccatacgttccgcaacctgatagcatatgagatgtgtccagattttgagaac |
21657941 |
T |
|
| Q |
223 |
gactacgggatttgttcttttgcagctttcatggactcgcttatcgacaatcctgaagatgtcaagttactaagatcaaaagggattttgctcaattccc |
322 |
Q |
| |
|
|| || || ||||||||||||| | |||||||||||||||| |||||| |||||||||| || ||| | | |||||||||||||||||| ||| | || |
|
|
| T |
21657942 |
gattatggaatttgttcttttgtaactttcatggactcgctcatcgaccatcctgaagacgtgaaggaattgagatcaaaagggattttggccaaatgcc |
21658041 |
T |
|
| Q |
323 |
ttgggagtgatgaggaagttgctgaacttttcaatatcataagtactgacttggtacctaactcagaaacatattttgaagttagagccaaaatacatga |
422 |
Q |
| |
|
|||| ||||||||||| ||||| | ||||||||||||||| |||||||||||||| || || | |||| ||| |||||||||||| ||||||||||| |
|
|
| T |
21658042 |
ttggcagtgatgaggatgttgccaatcttttcaatatcatatgtactgacttggtagctgacccggaaatatactttgaagttagattgaaaatacatga |
21658141 |
T |
|
| Q |
423 |
tcattaccgtaatagatgcaatacatggatggcgctgggatttcacacttacttcagcagtccttgggccattattgcattcattgctgcgtttaccgcc |
522 |
Q |
| |
|
||||||| |||||| || |||||| ||||| |||| ||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||| |||| |
|
|
| T |
21658142 |
tcattactgtaataaatacaatacttggatagcgcagggttttcatacttacttcagcagtccttgggccattattgcattcactgctgcggttatcgcc |
21658241 |
T |
|
| Q |
523 |
cttgttcttactttcattcagacatggtttgcaattaatccggcttgctgataaaggtggttcgttatagcaatgttgctttc |
605 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| | |||||| || ||||| ||| |||||||| |||||||| |||| |
|
|
| T |
21658242 |
cttgttcttactttcattcagacatggtttacaattcaaccggctagcaaataaatgtgattcgttatgacaatgttgttttc |
21658324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 33 - 429
Target Start/End: Original strand, 21727738 - 21728134
Alignment:
| Q |
33 |
gaacatacaagatctaagagctgtaggaataagacttaagtcaagcaagacgcgaaggccaagagacatagatttctccgaaggattgttcgccgcagaa |
132 |
Q |
| |
|
||||||| ||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| | |||||| |
|
|
| T |
21727738 |
gaacataaaagatctaaaagcattaggaataagacttaagtcaagcaagagacgaaggccaagagacatagatttctccgaaggatggttcactgcagaa |
21727837 |
T |
|
| Q |
133 |
ctgactcttcctgagatcgttgtggacgacacatcagccgctactttccttaacctgatagcatatgagatgtgtccagattttgacaacgactacggga |
232 |
Q |
| |
|
|| |||||||| ||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | |
|
|
| T |
21727838 |
ctaactcttcccgagatcgttgtggacaacatatcagccgctactttcctcaacctgatagcatatgagatgtgtccagattttgacaacgattacggaa |
21727937 |
T |
|
| Q |
233 |
tttgttcttttgcagctttcatggactcgcttatcgacaatcctgaagatgtcaagttactaagatcaaaagggattttgctcaattcccttgggagtga |
332 |
Q |
| |
|
|||||||||||| | |||| |||||||| ||||||||| ||||||||||||| ||| | | |||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
21727938 |
tttgttcttttgtatcttttatggactcacttatcgaccatcctgaagatgtgaaggaaatgagatcaaaagggatttcgctcaattcccttgggagtga |
21728037 |
T |
|
| Q |
333 |
tgaggaagttgctgaacttttcaatatcataagtactgacttggtacctaactcagaaacatattttgaagttagagccaaaatacatgatcattac |
429 |
Q |
| |
|
||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||| | |||||||||| |
|
|
| T |
21728038 |
tgaggaagtggttgaacttttcaatatcataagtactgacttggtacctaacacagaaacatattttgaagttaaagacaaaatgcttgatcattac |
21728134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 32 - 605
Target Start/End: Original strand, 21666607 - 21667180
Alignment:
| Q |
32 |
ggaacatacaagatctaagagctgtaggaataagacttaagtcaagcaagacgcgaaggccaagagacatagatttctccgaaggattgttcgccgcaga |
131 |
Q |
| |
|
|||||||||||||||||| ||| |||||||||||| |||||||||||||||| ||| ||| |||||| |||||||||||| ||||| |||||| || | |
|
|
| T |
21666607 |
ggaacatacaagatctaaaagcagtaggaataagagttaagtcaagcaagacacgatggctgagagacttagatttctccgcaggatggttcgctgcgaa |
21666706 |
T |
|
| Q |
132 |
actgactcttcctgagatcgttgtggacgacacatcagccgctactttccttaacctgatagcatatgagatgtgtccagattttgacaacgactacggg |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||| |||||| || |||||||||||||||||||||||||||| | || ||||||||| |
|
|
| T |
21666707 |
actgactcttcctgagatcgttgtggacgacacatcagccactattttcctcaataagatagcatatgagatgtgtccagattttaagaatgactacggg |
21666806 |
T |
|
| Q |
232 |
atttgttcttttgcagctttcatggactcgcttatcgacaatcctgaagatgtcaagttactaagatcaaaagggattttgctcaattcccttgggagtg |
331 |
Q |
| |
|
||||||||||||||||||||||| || || ||||||||| ||||||||||||| | | | | ||||||||||||||||||||||||| | ||||||||| |
|
|
| T |
21666807 |
atttgttcttttgcagctttcatcgagtcacttatcgaccatcctgaagatgtgagggaattgagatcaaaagggattttgctcaattgctttgggagtg |
21666906 |
T |
|
| Q |
332 |
atgaggaagttgctgaacttttcaatatcataagtactgacttggtacctaactcagaaacatattttgaagttagagccaaaatacatgatcattaccg |
431 |
Q |
| |
|
||||||||||||| | ||||||||||||||| ||||| || | ||||| | | |||||| ||| ||||| ||||||| |||| |||||| | |
|
|
| T |
21666907 |
atgaggaagttgccaatattttcaatatcataaccactgatgtgatgactaacataaacacatatcatgagcttagacgcaaaataaatgagcattactg |
21667006 |
T |
|
| Q |
432 |
taatagatgcaatacatggatggcgctgggatttcacacttacttcagcagtccttgggccattattgcattcattgctgcgtttaccgcccttgttctt |
531 |
Q |
| |
|
||||| || ||| || ||||| || | ||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||| |||||||| |
|
|
| T |
21667007 |
taataaatacaagacttggatagcacagggttttcacacttacttcagcagtccttgggccattactgcattccttgctgcgtttatcgccattgttctt |
21667106 |
T |
|
| Q |
532 |
actttcattcagacatggtttgcaattaatccggcttgctgataaaggtggttcgttatagcaatgttgctttc |
605 |
Q |
| |
|
||||||||||||||||||||| | ||| | |||||||||| |||||||||| ||||||| |||||||| |||| |
|
|
| T |
21667107 |
actttcattcagacatggtttacgattcacccggcttgctaataaaggtggctcgttatgacaatgttgttttc |
21667180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 45 - 689
Target Start/End: Original strand, 21994548 - 21995202
Alignment:
| Q |
45 |
tctaagagctgtaggaataagacttaagtcaagcaagacgcgaaggccaagagacatagatttctccgaaggattgttcgccgcagaactgactcttcct |
144 |
Q |
| |
|
||||||||| ||||||||| |||||||||||| | ||| |||| ||| | |||||| ||| | ||||||| |||| | || || ||||||||||| |
|
|
| T |
21994548 |
tctaagagcagtaggaatacgacttaagtcaaccgcgacacgaaatccacaaagcatagaattcgctgaaggatggttcactgcgaaattgactcttcct |
21994647 |
T |
|
| Q |
145 |
gagatcgttgtggacgacacatcagccgctactttccttaacctgatagcatatgagatgtgtccagattttgacaacgactacgggatttgttcttttg |
244 |
Q |
| |
|
||||||||||||||||| | ||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||| || ||||||||||||| |
|
|
| T |
21994648 |
gagatcgttgtggacgatagatcagccgctactatccttaacctgatagcatacgagatgtgtccagattttgagaacgactatggaatttgttcttttg |
21994747 |
T |
|
| Q |
245 |
cagctttcatggactcgcttatcgacaatcctgaagatgtcaagttactaagatcaaaagggattttgctcaattcccttgggagtgatgaggaagttgc |
344 |
Q |
| |
|
|| ||||||||||||| || |||||| ||||||||||||| |||||| | |||||||||||||||||||||||||| | | ||||||||||||||||||| |
|
|
| T |
21994748 |
caactttcatggactcactcatcgaccatcctgaagatgtgaagttattgagatcaaaagggattttgctcaattcaccttggagtgatgaggaagttgc |
21994847 |
T |
|
| Q |
345 |
tgaacttttcaatatcataagtactgacttggtacctaactcagaaacatattttgaagttagagccaaaatacatgatcattaccgtaatagatgcaat |
444 |
Q |
| |
|
| |||||||||| |||| ||||| |||| ||||| || |||||| ||||||| ||||||||||||||||| |||| |||||| |||||||||| || |
|
|
| T |
21994848 |
caatcttttcaatagcatacgtactaactttatacctgacacagaaatatattttaaagttagagccaaaatagatgaacattactgtaatagatggaag |
21994947 |
T |
|
| Q |
445 |
acatggatggcgctgggatttcacacttacttcagcagtccttgggccattattgcattcattgctgcgtttaccgcccttgttcttactttcattcaga |
544 |
Q |
| |
|
|||||||| | || ||| || ||||||||||||||| |||||||||| | ||||||||| ||||||| |||| |||||||| ||||||||| ||||||| |
|
|
| T |
21994948 |
acatggatagggcagggtttgaacacttacttcagcaatccttgggccttcattgcattcgttgctgcatttatcgcccttgctcttactttaattcaga |
21995047 |
T |
|
| Q |
545 |
catggtttgcaattaatccggcttgctgataaaggtggttcgttatagcaatgttgctttcatacgaataaaatttcgtaac--------gt---ttgag |
633 |
Q |
| |
|
|||||||| || || | |||||| | |||||||||||| ||||| |||||||||||||| || || |||||||||||||| || || | |
|
|
| T |
21995048 |
catggtttacagttcaaccggctagtaaataaaggtggtttgttatggcaatgttgctttcttaagattaaaatttcgtaacaaaaataggtcaagtgtg |
21995147 |
T |
|
| Q |
634 |
ttggtaatgcaccacgcataataattgccttctggtaaggcaagtagtgtacttca |
689 |
Q |
| |
|
|||||||| |||||| ||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
21995148 |
ttggtaatacaccacacataataattgtcttctggtaaggcaagt-gtgtacttca |
21995202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 25 - 607
Target Start/End: Original strand, 21630061 - 21630643
Alignment:
| Q |
25 |
acataccggaacatacaagatctaagagctgtaggaataagacttaagtcaagcaagacgcgaaggccaagagacatagatttctccgaaggattgttcg |
124 |
Q |
| |
|
|||||| |||||||||||||||||| |||||||||||||||||||||| |||||| ||| | ||||||||||||||||||||||| || ||||| ||||| |
|
|
| T |
21630061 |
acatacaggaacatacaagatctaaaagctgtaggaataagacttaagacaagcatgacacaaaggccaagagacatagatttctgcggaggatggttcg |
21630160 |
T |
|
| Q |
125 |
ccgcagaactgactcttcctgagatcgttgtggacgacacatcagccgctactttccttaacctgatagcatatgagatgtgtccagattttgacaacga |
224 |
Q |
| |
|
| |||||||||||||||||| |||| ||||| | || |||||| || ||||| ||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
21630161 |
ctgcagaactgactcttcctatgatcattgtgaccaacggttcagcccatatgttcctcaacctgatagcatatgagatgtgtccagattttgagaacga |
21630260 |
T |
|
| Q |
225 |
ctacgggatttgttcttttgcagctttcatggactcgcttatcgacaatcctgaagatgtcaagttactaagatcaaaagggattttgctcaattccctt |
324 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||| |||||| |||||||||| || ||| | | |||||||| ||||||||||||||| ||| |
|
|
| T |
21630261 |
ttacgaaatttgttcttttctagctttcatggactcgctcatcgaccatcctgaagacgtgaaggaattgagatcaaatgggattttgctcaataaactt |
21630360 |
T |
|
| Q |
325 |
gggagtgatgaggaagttgctgaacttttcaatatcataagtactgacttggtacctaactcagaaacatattttgaagttagagccaaaatacatgatc |
424 |
Q |
| |
|
|||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||| || | | ||| ||| |||| | |||||| |||||| |
|
|
| T |
21630361 |
gggagtgatgaggaagttgcccatcttttcaatatcataagtactgacttggtacgaaacacatacatataccatgacgttaaatggaaaataaatgatc |
21630460 |
T |
|
| Q |
425 |
attaccgtaatagatgcaatacatggatggcgctgggatttcacacttacttcagcagtccttgggccattattgcattcattgctgcgtttaccgccct |
524 |
Q |
| |
|
||||| |||||| || ||| || ||||| |||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||| || || ||| |
|
|
| T |
21630461 |
attactgtaataaatacaagacttggatagcgcagggttttcacacttacttcaacagtccttgggccattattgcattcattgctgcggttgtcgtcct |
21630560 |
T |
|
| Q |
525 |
tgttcttactttcattcagacatggtttgcaattaatccggcttgctgataaaggtggttcgttatagcaatgttgctttcat |
607 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| | ||| || || ||||| ||| |||||||| |||||||| |||||| |
|
|
| T |
21630561 |
tgttcttactttcattcagacatggtttacaattcacccgactagcaaataaaagtgattcgttatgacaatgttgttttcat |
21630643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 20 - 605
Target Start/End: Original strand, 15714910 - 15715494
Alignment:
| Q |
20 |
tgatgacataccggaacatacaagatctaagagctgtaggaataagacttaagtcaagcaagacgcgaaggccaagagacatagatttctccgaaggatt |
119 |
Q |
| |
|
|||| |||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||| ||| ||||||||||| | ||||| |
|
|
| T |
15714910 |
tgattacatacaggagcatacaagatctaagagcagtaggaataagacttaagtcaagcaagacacaaaggccaacagagatagatttctctgcaggatg |
15715009 |
T |
|
| Q |
120 |
gttcgccgcagaactgactcttcctgagatcgttgtggacgacacatcagccgctactttccttaacctgatagcatatgagatgtgtccagattttgac |
219 |
Q |
| |
|
||| || || |||||||||||||| |||| ||||||| |||| |||||||||||||||| |||| ||||||||||||||| |||||||||||||| |
|
|
| T |
15715010 |
gtttgctgcgaaactgactcttcctcggatccgtgtggacaacactacagccgctactttcctcaaccagatagcatatgagatttgtccagattttgat |
15715109 |
T |
|
| Q |
220 |
aacgactacgggatttgttcttttgcagctttcatggactcgcttatcgacaatcctgaagatgtcaagttactaagatcaaaagggattttgctcaatt |
319 |
Q |
| |
|
|||||||||| ||| ||||||||| |||||||| ||| |||||| |||||| |||||||||||| ||| | | ||||||||||||||||||||||||| |
|
|
| T |
15715110 |
aacgactacgagatctgttctttttcagctttcttggcctcgctcatcgaccgtcctgaagatgtgaaggaattgagatcaaaagggattttgctcaatt |
15715209 |
T |
|
| Q |
320 |
cccttgggagtgatgaggaagttgctgaacttttcaatatcataagtactgacttggtacctaactcagaaacatattttgaagttagagccaaaataca |
419 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||||||||||||||| || |||||| | || | |||||| || |||||||||| ||| ||||| |
|
|
| T |
15715210 |
tacttgggagtgatgaggaagttgtcaatcttttcaatatcataagtactaacgtggtacattacggaaaaacattttatgaagttagacgcaagataca |
15715309 |
T |
|
| Q |
420 |
tgatcattaccgtaatagatgcaatacatggatggcgctgggatttcacacttacttcagcagtccttgggccattattgcattcattgctgcgtttacc |
519 |
Q |
| |
|
||| ||||| |||||| || ||| || ||||| |||| ||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||||||| | |
|
|
| T |
15715310 |
tgagcattatagtaataaatacaagacttggatagcgcagggttttcacacttacttcagcaatccttgggccattactgcattccttgctgcgtttatc |
15715409 |
T |
|
| Q |
520 |
gcccttgttcttactttcattcagacatggtttgcaattaatccggcttgctgataaaggtggttcgttatagcaatgttgctttc |
605 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||| | |||| ||| || || | |||||||||||||||| |||||||| |||| |
|
|
| T |
15715410 |
gcccttgctcttactttcattcagacatgatttactgttaacccgcctagc-aaaaaaggtggttcgttatgacaatgttgttttc |
15715494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 17 - 579
Target Start/End: Original strand, 21697717 - 21698279
Alignment:
| Q |
17 |
agatgatgacataccggaacatacaagatctaagagctgtaggaataagacttaagtcaagcaagacgcgaaggccaagagacatagatttctccgaagg |
116 |
Q |
| |
|
||||||| ||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||| | ||| ||||||||||| ||||||| |||||| |
|
|
| T |
21697717 |
agatgattacatataggaacatacaagatctaaaagcagtaggaataagacttaagtcaagcaagacacaaagcccaagagacatggatttctgcgaagg |
21697816 |
T |
|
| Q |
117 |
attgttcgccgcagaactgactcttcctgagatcgttgtggacgacacatcagccgctactttccttaacctgatagcatatgagatgtgtccagatttt |
216 |
Q |
| |
|
|| |||||| || ||||||||| ||||||||||||||||||||||||| |||| ||||| || || ||||||||||||||||||||||| |||||| |
|
|
| T |
21697817 |
atggttcgctgcgacactgactctacctgagatcgttgtggacgacacattagcctttacttatctcaatctgatagcatatgagatgtgtcccgatttt |
21697916 |
T |
|
| Q |
217 |
gacaacgactacgggatttgttcttttgcagctttcatggactcgcttatcgacaatcctgaagatgtcaagttactaagatcaaaagggattttgctca |
316 |
Q |
| |
|
| |||||||||| |||||||||| || |||||||||||| || || || ||| ||||||||||||| ||| | | ||||||||| |||||||||||| |
|
|
| T |
21697917 |
aagaacgactacgtaatttgttcttatgtagctttcatggagtcactcattgaccatcctgaagatgtgaaggaattgagatcaaaacggattttgctca |
21698016 |
T |
|
| Q |
317 |
attcccttgggagtgatgaggaagttgctgaacttttcaatatcataagtactgacttggtacctaactcagaaacatattttgaagttagagccaaaat |
416 |
Q |
| |
|
||| |||||||||||||||||||||||| ||||||||||||||||| | ||||||||| ||||| ||| ||||||| ||| |||||| |||||| |
|
|
| T |
21698017 |
attgccttgggagtgatgaggaagttgccaaacttttcaatatcataggcactgacttgacgactaacatagacacatattatgatgttagatgcaaaat |
21698116 |
T |
|
| Q |
417 |
acatgatcattaccgtaatagatgcaatacatggatggcgctgggatttcacacttacttcagcagtccttgggccattattgcattcattgctgcgttt |
516 |
Q |
| |
|
| || | ||||| |||| |||| ||| || ||||| ||| ||| ||| | | | | ||||||||||||||| ||||||||||||||| |||||||| | |
|
|
| T |
21698117 |
aaataagcattatagtaacagatacaagacttggatagcgaagggttttgagaatcatttcagcagtccttggaccattattgcattcagtgctgcgtct |
21698216 |
T |
|
| Q |
517 |
accgcccttgttcttactttcattcagacatggtttgcaattaatccggcttgctgataaagg |
579 |
Q |
| |
|
| |||||||||||||||| |||||||||||| |||| | ||| | ||||||||| ||||||| |
|
|
| T |
21698217 |
atcgcccttgttcttactctcattcagacattgtttacgattcacccggcttgcaaataaagg |
21698279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 13 - 429
Target Start/End: Original strand, 21710997 - 21711413
Alignment:
| Q |
13 |
gtcaagatgatgacataccggaacatacaagatctaagagctgtaggaataagacttaagtcaagcaagacgcgaaggccaagagacatagatttctccg |
112 |
Q |
| |
|
|||||||||||||||||| ||| |||| ||||||||||| ||||||||||||||||||| |||||||| | ||| ||||||||||| |||||||||| |
|
|
| T |
21710997 |
gtcaagatgatgacatacaggagcataaaagatctaagaaaaataggaataagacttaagtctagcaagacacaaagtccaagagacatggatttctccg |
21711096 |
T |
|
| Q |
113 |
aaggattgttcgccgcagaactgactcttcctgagatcgttgtggacgacacatcagccgctactttccttaacctgatagcatatgagatgtgtccaga |
212 |
Q |
| |
|
|||||| || | ||| ||||||| | ||||||||||||||||||||||||||||| ||||||||||| ||| | ||||| ||||||||||||||||| |
|
|
| T |
21711097 |
aaggatgattggttgcaaaactgacattacctgagatcgttgtggacgacacatcagctgctactttcctcaacttaatagcgtatgagatgtgtccaga |
21711196 |
T |
|
| Q |
213 |
ttttgacaacgactacgggatttgttcttttgcagctttcatggactcgcttatcgacaatcctgaagatgtcaagttactaagatcaaaagggattttg |
312 |
Q |
| |
|
|||| | |||||||| || |||||||||||||||||||||||||||| || || || |||||||||| || ||| || | |||||||||||||||||| |
|
|
| T |
21711197 |
ttttaagaacgactatggattttgttcttttgcagctttcatggactcactcattgagcatcctgaagaagtgaagctattgagatcaaaagggattttg |
21711296 |
T |
|
| Q |
313 |
ctcaattcccttgggagtgatgaggaagttgctgaacttttcaatatcataagtactgacttggtacctaactcagaaacatattttgaagttagagcca |
412 |
Q |
| |
|
||||||||||||||||||||||||||| |||| || |||||||| |||||| ||||||||||| ||||||| | |||||||| |||||||| ||||||| |
|
|
| T |
21711297 |
ctcaattcccttgggagtgatgaggaaattgccgatcttttcaaaatcataggtactgacttgatacctaatactgaaacatactttgaagtaagagcca |
21711396 |
T |
|
| Q |
413 |
aaatacatgatcattac |
429 |
Q |
| |
|
||||| |||| |||||| |
|
|
| T |
21711397 |
aaatagatgaacattac |
21711413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 22 - 461
Target Start/End: Original strand, 21647836 - 21648275
Alignment:
| Q |
22 |
atgacataccggaacatacaagatctaagagctgtaggaataagacttaagtcaagcaagacgcgaaggccaagagacatagatttctccgaaggattgt |
121 |
Q |
| |
|
||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||| ||||||||| | |||||||| ||||||| || |
|
|
| T |
21647836 |
atgacatacaggagcatacaagatctaagaaaagtaggaataagacttaagtcaagcatgactcgaagtccaagagacttggatttctctgaaggatggt |
21647935 |
T |
|
| Q |
122 |
tcgccgcagaactgactcttcctgagatcgttgtggacgacacatcagccgctactttccttaacctgatagcatatgagatgtgtccagattttgacaa |
221 |
Q |
| |
|
| ||| | || ||||| ||||||||||||||||||||| ||||||| |||||| || ||||||||||||||||||||||||||||||||| | || |
|
|
| T |
21647936 |
tgattgcaaagctaactctacctgagatcgttgtggacgactcatcagctactacttatctcaacctgatagcatatgagatgtgtccagattttaagaa |
21648035 |
T |
|
| Q |
222 |
cgactacgggatttgttcttttgcagctttcatggactcgcttatcgacaatcctgaagatgtcaagttactaagatcaaaagggattttgctcaattcc |
321 |
Q |
| |
|
| ||||| | ||||||||||||||||||||||||||||| || |||||| ||||||||| ||| ||| || | |||||||||| |||||||||||||||| |
|
|
| T |
21648036 |
caactacagaatttgttcttttgcagctttcatggactcactcatcgaccatcctgaagttgtgaagctattgagatcaaaagagattttgctcaattcc |
21648135 |
T |
|
| Q |
322 |
cttgggagtgatgaggaagttgctgaacttttcaatatcataagtactgacttggtacctaactcagaaacatattttgaagttagagccaaaatacatg |
421 |
Q |
| |
|
|||||||| ||||||||| |||| || |||||||| |||||| |||| |||||| ||||||| ||||||||||||| |||||||||||||||| || |
|
|
| T |
21648136 |
cttgggagcgatgaggaaattgccgatcttttcaaaatcataggtaccgacttgatacctaatacagaaacatatttcagagttagagccaaaatagatt |
21648235 |
T |
|
| Q |
422 |
atcattaccgtaatagatgcaatacatggatggcgctggg |
461 |
Q |
| |
|
||||||||||||||| |||||| || ||||| | |||||| |
|
|
| T |
21648236 |
atcattaccgtaataaatgcaagacttggatagtgctggg |
21648275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 19 - 481
Target Start/End: Original strand, 21653160 - 21653622
Alignment:
| Q |
19 |
atgatgacataccggaacatacaagatctaagagctgtaggaataagacttaagtcaagcaagacgcgaaggccaagagacatagatttctccgaaggat |
118 |
Q |
| |
|
||||||||||| |||||||||||||||||| ||| | |||| ||||| ||||||||||| || || ||||||| |||||| |||||| |||||||| |
|
|
| T |
21653160 |
atgatgacatataggaacatacaagatctaaaagcagcaggagtaagatttaagtcaagcttcacacgtaggccaaaagacattaatttctacgaaggat |
21653259 |
T |
|
| Q |
119 |
tgttcgccgcagaactgactcttcctgagatcgttgtggacgacacatcagccgctactttccttaacctgatagcatatgagatgtgtccagattttga |
218 |
Q |
| |
|
| | ||||| |||| | ||||||||||||||||||||||||||| |||||| |||||||||| ||| |||||||||||||||||||||| |||||||| |
|
|
| T |
21653260 |
ggcttaccgcaaaactaattcttcctgagatcgttgtggacgacacttcagccactactttcctcaacttgatagcatatgagatgtgtcctgattttga |
21653359 |
T |
|
| Q |
219 |
caacgactacgggatttgttcttttgcagctttcatggactcgcttatcgacaatcctgaagatgtcaagttactaagatcaaaagggattttgctcaat |
318 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||| ||||| ||||| || ||||||||||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
21653360 |
gaacgactatggaatttgttcttttgcagctttcattgactcacttattgaagatcctgaagatgtgaaggtactaagatcaaaagggattttgctcaat |
21653459 |
T |
|
| Q |
319 |
tcccttgggagtgatgaggaagttgctgaacttttcaatatcataagtactgacttggtacctaactcagaaacatattttgaagttagagccaaaatac |
418 |
Q |
| |
|
||||||||||||||||||||| | | | ||||||| ||||||||||||||| |||| |||||| ||||| ||||| |||||||||| ||||||| |
|
|
| T |
21653460 |
tcccttgggagtgatgaggaactcgtcaattttttcaaaatcataagtactgacgtggttcctaacagagaaatatattatgaagttagacgcaaaataa |
21653559 |
T |
|
| Q |
419 |
atgatcattaccgtaatagatgcaatacatggatggcgctgggatttcacacttacttcagca |
481 |
Q |
| |
|
|||| |||||| | || || | ||| || ||||| ||| || | ||||||||||||||||||| |
|
|
| T |
21653560 |
atgagcattacagcaacagctacaagacttggatagcgatgagttttcacacttacttcagca |
21653622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 32 - 552
Target Start/End: Original strand, 21793102 - 21793619
Alignment:
| Q |
32 |
ggaacatacaagatctaagagctgtaggaataagacttaagtcaagcaagacgcgaaggccaagagacatagatttctccgaaggattgttcgccgcaga |
131 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||| || | ||| |||| ||||||| |||||||||| |||| |||| | ||||| |
|
|
| T |
21793102 |
ggaacatacaagatctaaaagctgtaggaataagacttaagtcaagcaatacaccaagcccaaaagacatacatttctccgatggatggttcactgcaga |
21793201 |
T |
|
| Q |
132 |
actgactcttcctgagatcgttgtggacgacacatcagccgctactttccttaacctgatagcatatgagatgtgtccagattttgacaacgactacggg |
231 |
Q |
| |
|
||||||||||||| |||| ||||| ||||| |||||| |||||||| | ||||||| ||||||||||||||||||||||||||| ||| | |||| |
|
|
| T |
21793202 |
actgactcttcctatgatcattgtgaccgacagttcagcctctactttcttcaacctgacagcatatgagatgtgtccagattttgagaacaaatacgaa |
21793301 |
T |
|
| Q |
232 |
atttgttcttttgcagctttcatggactcgcttatcgacaatcctgaagatgtcaagttactaagatcaaaagggattttgctcaattcccttgggagtg |
331 |
Q |
| |
|
||||||||||||| || ||||||||| || || |||||| ||||||||||||| ||| | | ||||||||||||||||||| |||| |||||||||| |
|
|
| T |
21793302 |
atttgttcttttgtagttttcatggagtcactcatcgaccatcctgaagatgtgaaggaattgagatcaaaagggattttgcgcaataaacttgggagtg |
21793401 |
T |
|
| Q |
332 |
atgaggaagttgctgaacttttcaatatcataagtactgacttggtacctaactcagaaacatattttgaagttagagccaaaatacatgatcattaccg |
431 |
Q |
| |
|
||||||||||||| | |||||||||||||||||||| |||||| | || | ||||||| | ||||| || || |||||| | |||||||| |
|
|
| T |
21793402 |
atgaggaagttgcccatcttttcaatatcataagtaccgacttgaga---aaaagtggaacatataataaagtttcagaaaacatacataagcattaccg |
21793498 |
T |
|
| Q |
432 |
taatagatgcaatacatggatggcgctgggatttcacacttacttcagcagtccttgggccattattgcattcattgctgcgtttaccgcccttgttctt |
531 |
Q |
| |
|
||||| || ||| | ||||| |||| | | ||||||||| ||||||||| |||||||||||||| ||||||| |||||||||||| |||||||| |||| |
|
|
| T |
21793499 |
taataaatacaagaattggatagcgcagcgttttcacactcacttcagcaatccttgggccattactgcattccttgctgcgtttatcgcccttgctctt |
21793598 |
T |
|
| Q |
532 |
actttcattcagacatggttt |
552 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
21793599 |
actttcattcagacatggttt |
21793619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 36 - 605
Target Start/End: Original strand, 21705599 - 21706165
Alignment:
| Q |
36 |
catacaagatctaagagctgtaggaataagacttaagtcaagcaagacgcgaaggccaagagacatagatttctccgaaggattgttcgccgcagaactg |
135 |
Q |
| |
|
|||| ||||||||||||| |||||||||||||||||| ||||| || | ||||||| |||| |||||||| | | ||||| ||| | ||| ||||| |
|
|
| T |
21705599 |
catagaagatctaagagcagtaggaataagacttaaggcaagcgcaacagggaggccaacagacgtagatttcactgcaggatggtttactgcaaaactg |
21705698 |
T |
|
| Q |
136 |
actcttcctgagatcgttgtggacgacacatcagccgctactttccttaacctgatagcatatgagatgtgtccagattttgacaacgactacgggattt |
235 |
Q |
| |
|
||| |||||| ||| |||| || || ||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||| | |
|
|
| T |
21705699 |
actattcctgtaatctatgtgaacaaccttgcagcctctactttactcaacctgatagcatatgagatgtgtccagattttgacaacgactgtgggatct |
21705798 |
T |
|
| Q |
236 |
gttcttttgcagctttcatggactcgcttatcgacaatcctgaagatgtcaagttactaagatcaaaagggattttgctcaattcccttgggagtgatga |
335 |
Q |
| |
|
|||||| || |||||| |||||||| || |||||| |||| |||||||| ||| || | |||||||||||||||||| || | || |||||||||| |
|
|
| T |
21705799 |
gttcttatgtagctttgatggactcactcatcgaccatccggaagatgtgaaggtattgagatcaaaagggattttgtgca---cggtttggagtgatga |
21705895 |
T |
|
| Q |
336 |
ggaagttgctgaacttttcaatatcataagtactgacttggtacctaactcagaaacatattttgaagttagagccaaaatacatgatcattaccgtaat |
435 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||||||| ||||| ||| | ||||||| | || | ||| ||| ||| |||||| |||| |
|
|
| T |
21705896 |
ggaagttgccagtcttttcaatatcataggtactgacttggtagctaacatagacaaatatttttatgtccaactgaaattacgtgagcattactttaat |
21705995 |
T |
|
| Q |
436 |
agatgcaatacatggatggcgctgggatttcacacttacttcagcagtccttgggccattattgcattcattgctgcgtttaccgcccttgttcttactt |
535 |
Q |
| |
|
| || ||| || ||||| |||||||| |||| |||||||| | || |||||||||| ||||||| ||| ||||||| ||||| ||||||| |||||||| |
|
|
| T |
21705996 |
aaatacaagacttggatagcgctgggttttcgtacttacttaaacaatccttgggccgttattgccttccttgctgcttttactgcccttgctcttactt |
21706095 |
T |
|
| Q |
536 |
tcattcagacatggtttgcaattaatccggcttgctgataaaggtggttcgttatagcaatgttgctttc |
605 |
Q |
| |
|
||||||||||||||||| || || | |||||| | ||||||||| |||||||| |||||||| |||| |
|
|
| T |
21706096 |
tcattcagacatggtttacagttcacccggctaacaaataaaggtgcttcgttatgacaatgttgttttc |
21706165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 171 - 558
Target Start/End: Complemental strand, 21803898 - 21803514
Alignment:
| Q |
171 |
cgctactttccttaacctgatagcatatgagatgtgtccagattttgacaacgactacgggatttgttcttttgcagctttcatggactcgcttatcgac |
270 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||| | |||||||| | | ||||||||| || ||||||||||||||| || || ||| |
|
|
| T |
21803898 |
cgctactttccttaacctgattgcatatgagatgtgtccagattttaagaacgactatgagttttgttcttatgtagctttcatggactctctcattgac |
21803799 |
T |
|
| Q |
271 |
aatcctgaagatgtcaagttactaagatcaaaagggattttgctcaattcccttgggagtgatgaggaagttgctgaacttttcaatatcataagtactg |
370 |
Q |
| |
|
||||||||||||| ||| | | |||||||||||||||||| || || || ||||||||||||||||||| | ||||||||||||||| |||||| |
|
|
| T |
21803798 |
catcctgaagatgtgaaggcattgagatcaaaagggattttgtgca---ccttttggagtgatgaggaagttgccaatcttttcaatatcataggtactg |
21803702 |
T |
|
| Q |
371 |
acttggtacctaactcagaaacatattttgaagttagagccaaaatacatgatcattaccgtaatagatgcaatacatggatggcgctgggatttcacac |
470 |
Q |
| |
|
||||| | ||||| |||| |||||||||| | | || ||||||| |||| |||| ||||||| || ||| | ||||| ||| |||| |||| ||| |
|
|
| T |
21803701 |
gcttggaatctaacatagaattatattttgaaatcaaagtcaaaatagatgaaaattatcgtaataaatacaagagttggatagcgttgggttttcgcac |
21803602 |
T |
|
| Q |
471 |
ttacttcagcagtccttgggccattattgcattcattgctgcgtttaccgcccttgttcttactttcattcagacatggtttgcaatt |
558 |
Q |
| |
|
|||||||| || ||||||| |||||||||||||| ||||||| |||| ||||| | |||||||||||||||||||| |||| ||||| |
|
|
| T |
21803601 |
ttacttcaacaatccttggaccattattgcattccttgctgcatttattgccctcgctcttactttcattcagacattgtttacaatt |
21803514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 36 - 605
Target Start/End: Original strand, 21765225 - 21765791
Alignment:
| Q |
36 |
catacaagatctaagagctgtaggaataagacttaagtcaagcaagacgcgaaggccaagagacatagatttctccgaaggattgttcgccgcagaactg |
135 |
Q |
| |
|
|||| ||||||||||||| |||||||||||||||||| ||||| || | ||||||| |||| |||||||| | | ||||| ||| | ||| ||||| |
|
|
| T |
21765225 |
catagaagatctaagagcagtaggaataagacttaagacaagcgcaacaaggaggccaacagacgtagatttcactgcaggatggtttactgcaaaactg |
21765324 |
T |
|
| Q |
136 |
actcttcctgagatcgttgtggacgacacatcagccgctactttccttaacctgatagcatatgagatgtgtccagattttgacaacgactacgggattt |
235 |
Q |
| |
|
||| |||||| ||| |||| || || ||||| ||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||| | |
|
|
| T |
21765325 |
actattcctgtaatctatgtgaacaaccttgcagcctctaatttactcaacctgatagcatatgagatgtgtccagattttgacaacgactgtgggatct |
21765424 |
T |
|
| Q |
236 |
gttcttttgcagctttcatggactcgcttatcgacaatcctgaagatgtcaagttactaagatcaaaagggattttgctcaattcccttgggagtgatga |
335 |
Q |
| |
|
|||||| || |||||| |||||||| || |||||| |||| |||||||| ||| || | |||||||||||||||||| || | || |||||||||| |
|
|
| T |
21765425 |
gttcttatgtagctttgatggactcactcatcgaccatccggaagatgtgaaggtattgagatcaaaagggattttgtgca---cggtttggagtgatga |
21765521 |
T |
|
| Q |
336 |
ggaagttgctgaacttttcaatatcataagtactgacttggtacctaactcagaaacatattttgaagttagagccaaaatacatgatcattaccgtaat |
435 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||||||| |||| | | ||||||||||| || ||| || ||| |||||| |||| |
|
|
| T |
21765522 |
ggaagttgccagtcttttcaatatcataggtactgacttggtaattaacatattcaactattttgaagtccaagtgaaattaagtgaccattactttaat |
21765621 |
T |
|
| Q |
436 |
agatgcaatacatggatggcgctgggatttcacacttacttcagcagtccttgggccattattgcattcattgctgcgtttaccgcccttgttcttactt |
535 |
Q |
| |
|
| || ||| | ||||| |||||||| |||| ||||||||||| || ||||||| || ||||||| ||| ||||||| ||||| ||||||| |||||||| |
|
|
| T |
21765622 |
aaatacaagagttggatagcgctgggttttcgcacttacttcaacaatccttggaccgttattgccttccttgctgcatttactgcccttgctcttactt |
21765721 |
T |
|
| Q |
536 |
tcattcagacatggtttgcaattaatccggcttgctgataaaggtggttcgttatagcaatgttgctttc |
605 |
Q |
| |
|
||||||||||||||||| | || | |||||| || |||| ||||||||||||| |||||||| |||| |
|
|
| T |
21765722 |
tcattcagacatggtttacggttcacccggctagcaaataatggtggttcgttatgacaatgttgttttc |
21765791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 21624204 - 21624296
Alignment:
| Q |
8 |
aaaaggtcaagatgatgacataccggaacatacaagatctaagagctgtaggaataagacttaagtcaagcaagacgcgaaggccaagagaca |
100 |
Q |
| |
|
|||| |||||||||| ||||||| ||||||||||| |||||||| ||| ||||||||||||| ||||||||||| ||||| |||||||||| |
|
|
| T |
21624204 |
aaaacgtcaagatgacgacatacaggaacatacaaaatctaagaactggaggaataagacttggatcaagcaagacacgaagtccaagagaca |
21624296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 21727039 - 21727114
Alignment:
| Q |
33 |
gaacatacaagatctaagagctgtaggaataagacttaagtcaagcaagacgcgaaggccaagagacatagatttc |
108 |
Q |
| |
|
||||||| ||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||| |
|
|
| T |
21727039 |
gaacataaaagatctaaaagcactaggaataagacttaagtcaagcaagatacgaaggccaagagacataaatttc |
21727114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 21746376 - 21746491
Alignment:
| Q |
468 |
cacttacttcagcagtccttgggccattattgcattcattgctgcgtttaccgcccttgttcttactttcattcagacatggtttgcaattaatccggct |
567 |
Q |
| |
|
||||||||||| || |||||||||| ||||||||||| || |||| |||| ||||||| |||||||||||||||||||||||||| | |||||| |
|
|
| T |
21746376 |
cacttacttcaacaatccttgggccgttattgcattcgttcctgcatttattgcccttg------ctttcattcagacatggtttgcaattcacccggct |
21746469 |
T |
|
| Q |
568 |
tgctgataaaggtggttcgttat |
590 |
Q |
| |
|
|| |||||||||||| ||||| |
|
|
| T |
21746470 |
agc-aataaaggtggttagttat |
21746491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 504 - 552
Target Start/End: Original strand, 21653621 - 21653669
Alignment:
| Q |
504 |
cattgctgcgtttaccgcccttgttcttactttcattcagacatggttt |
552 |
Q |
| |
|
|||||||||| ||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
21653621 |
cattgctgcggttatcgcccttgctcttactttcattcagacatggttt |
21653669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 504 - 567
Target Start/End: Original strand, 21648294 - 21648357
Alignment:
| Q |
504 |
cattgctgcgtttaccgcccttgttcttactttcattcagacatggtttgcaattaatccggct |
567 |
Q |
| |
|
||||||||| |||| |||||||| ||||||||||||||||||| |||||||||| | |||||| |
|
|
| T |
21648294 |
cattgctgcatttatcgcccttgctcttactttcattcagacagtgtttgcaattcacccggct |
21648357 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 327
Target Start/End: Original strand, 21639226 - 21639255
Alignment:
| Q |
298 |
tcaaaagggattttgctcaattcccttggg |
327 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
21639226 |
tcaaaagggattttgctcaattcccttggg |
21639255 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182 (Bit Score: 127; Significance: 3e-65; HSPs: 1)
Name: scaffold0182
Description:
Target: scaffold0182; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 36 - 600
Target Start/End: Original strand, 26569 - 27130
Alignment:
| Q |
36 |
catacaagatctaagagctgtaggaataagacttaagtcaagcaagacgcgaaggccaagagacatagatttctccgaaggattgttcgccgcagaactg |
135 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||| ||||| || | || ||||| ||||||||||||||| | ||||| ||| | || ||||| |
|
|
| T |
26569 |
catagaagatctaagagcagtaggaataagtcttaaggcaagctttacaccaaagccaacagacatagatttctctgcaggatggttttctgcgaaactg |
26668 |
T |
|
| Q |
136 |
actcttcctgagatcgttgtggacgacacatcagccgctactttccttaacctgatagcatatgagatgtgtccagattttgacaacgactacgggattt |
235 |
Q |
| |
|
||| ||||| |||| ||| || || ||||||||| |||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
26669 |
actattcctaggatcccagtgaacaactttacagccgctattttcctcaacctggtggcatatgagatgtgtccagattttgacaacgactatcagattt |
26768 |
T |
|
| Q |
236 |
gttcttttgcagctttcatggactcgcttatcgacaatcctgaagatgtcaagttactaagatcaaaagggattttgctcaattcccttgggagtgatga |
335 |
Q |
| |
|
|||||| || |||| ||||||||||||| |||||| ||||||||||||| ||| |||| ||||||||| |||||||| || || | |||||||||| |
|
|
| T |
26769 |
gttcttatgtagctctcatggactcgctcatcgaccatcctgaagatgtgaaggtactgagatcaaaaaggattttgtcca---ccttatggagtgatga |
26865 |
T |
|
| Q |
336 |
ggaagttgctgaacttttcaatatcataagtactgacttggtacctaactcagaaacatattttgaagttagagccaaaatacatgatcattaccgtaat |
435 |
Q |
| |
|
||||||||| | ||||||||||||||| |||| ||| ||||| ||||| || | ||||||| | || || ||| || ||| |||||| |||| |
|
|
| T |
26866 |
ggaagttgccaaccttttcaatatcataggtaccgacctggtagctaacatcgacaaatatttttatgtccaagataaattatgtgagcattactttaat |
26965 |
T |
|
| Q |
436 |
agatgcaatacatggatggcgctgggatttcacacttacttcagcagtccttgggccattattgcattcattgctgcgtttaccgcccttgttcttactt |
535 |
Q |
| |
|
| || ||| | ||||| ||| |||| |||| ||||||||||| || ||||||| || ||||||||||| ||| ||| ||||| ||||||| |||||||| |
|
|
| T |
26966 |
aaatacaagagttggatagcgttgggttttcgcacttacttcaacaatccttggaccgttattgcattccttgttgcatttactgcccttgctcttactt |
27065 |
T |
|
| Q |
536 |
tcattcagacatggtttgcaattaatccggcttgctgataaaggtggttcgttatagcaatgttg |
600 |
Q |
| |
|
||||||||||||||||| | || | |||||| || |||||||| ||||||||| |||||||| |
|
|
| T |
27066 |
tcattcagacatggtttacggttcacccggctagcaaataaaggttgttcgttatgacaatgttg |
27130 |
T |
|
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