View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1883-Insertion-4 (Length: 1003)

Name: NF1883-Insertion-4
Description: NF1883
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1883-Insertion-4
NF1883-Insertion-4
[»] chr8 (40 HSPs)
chr8 (114-371)||(29165365-29165619)
chr8 (582-799)||(29165127-29165349)
chr8 (396-470)||(5742543-5742617)
chr8 (402-469)||(38939084-38939151)
chr8 (395-470)||(45405720-45405795)
chr8 (402-470)||(28156314-28156382)
chr8 (395-469)||(32674117-32674191)
chr8 (404-469)||(42651032-42651097)
chr8 (403-470)||(33635686-33635753)
chr8 (420-469)||(14233554-14233603)
chr8 (404-467)||(34578231-34578294)
chr8 (390-469)||(29910093-29910171)
chr8 (800-846)||(29165061-29165107)
chr8 (404-470)||(34247885-34247951)
chr8 (404-462)||(34883283-34883341)
chr8 (397-470)||(25430757-25430830)
chr8 (397-470)||(34838157-34838230)
chr8 (421-469)||(13924121-13924169)
chr8 (548-584)||(27300343-27300379)
chr8 (394-470)||(41776286-41776362)
chr8 (420-467)||(3394612-3394659)
chr8 (404-467)||(18550093-18550156)
chr8 (555-586)||(21273755-21273786)
chr8 (395-470)||(28713204-28713279)
chr8 (395-470)||(28720551-28720626)
chr8 (395-470)||(28728193-28728268)
chr8 (420-470)||(8233406-8233456)
chr8 (548-582)||(21649206-21649240)
chr8 (396-470)||(22203101-22203175)
chr8 (548-582)||(36675335-36675369)
chr8 (548-581)||(5742695-5742728)
chr8 (421-470)||(6243145-6243194)
chr8 (554-591)||(6445165-6445202)
chr8 (548-581)||(13924022-13924055)
chr8 (548-581)||(22203253-22203286)
chr8 (553-582)||(22960460-22960489)
chr8 (548-581)||(25430657-25430690)
chr8 (548-581)||(28156203-28156236)
chr8 (548-581)||(34578415-34578448)
chr8 (548-581)||(35701865-35701898)
[»] chr7 (33 HSPs)
chr7 (396-470)||(2600420-2600494)
chr7 (402-470)||(37970044-37970112)
chr7 (402-469)||(47379672-47379739)
chr7 (393-470)||(640503-640580)
chr7 (398-467)||(41458788-41458857)
chr7 (396-470)||(11070339-11070413)
chr7 (399-469)||(28548124-28548194)
chr7 (397-469)||(384663-384735)
chr7 (397-470)||(44185287-44185360)
chr7 (548-583)||(2600572-2600607)
chr7 (548-583)||(7295448-7295483)
chr7 (548-582)||(11789729-11789763)
chr7 (393-443)||(32747370-32747420)
chr7 (402-470)||(23034205-23034273)
chr7 (402-470)||(27704546-27704614)
chr7 (548-584)||(27866564-27866600)
chr7 (548-583)||(25272600-25272635)
chr7 (548-583)||(33465066-33465101)
chr7 (398-469)||(39369414-39369485)
chr7 (395-470)||(47945094-47945169)
chr7 (395-470)||(47950524-47950599)
chr7 (551-581)||(11070228-11070258)
chr7 (409-467)||(33341024-33341082)
chr7 (548-582)||(41458938-41458972)
chr7 (555-584)||(33050180-33050209)
chr7 (548-585)||(34349065-34349102)
chr7 (440-469)||(35212887-35212916)
chr7 (402-467)||(36108286-36108350)
chr7 (548-585)||(40207838-40207875)
chr7 (548-581)||(41538482-41538515)
chr7 (421-470)||(45335974-45336023)
chr7 (548-581)||(48522156-48522189)
chr7 (548-581)||(48639421-48639454)
[»] chr2 (49 HSPs)
chr2 (395-469)||(40721883-40721957)
chr2 (396-470)||(34373119-34373193)
chr2 (390-470)||(38724197-38724277)
chr2 (402-469)||(43026048-43026115)
chr2 (394-470)||(25094463-25094539)
chr2 (399-470)||(13850073-13850144)
chr2 (389-470)||(4858224-4858305)
chr2 (394-470)||(304876-304952)
chr2 (402-470)||(1151640-1151708)
chr2 (402-470)||(27329001-27329069)
chr2 (397-460)||(24727523-24727586)
chr2 (404-470)||(9377652-9377718)
chr2 (393-470)||(23141465-23141542)
chr2 (393-470)||(23553255-23553332)
chr2 (402-470)||(30340105-30340173)
chr2 (398-470)||(37827673-37827745)
chr2 (404-470)||(35518386-35518452)
chr2 (402-470)||(11728013-11728081)
chr2 (396-459)||(33569690-33569753)
chr2 (404-470)||(8757655-8757721)
chr2 (394-469)||(24491561-24491636)
chr2 (421-470)||(37064169-37064218)
chr2 (551-592)||(38724348-38724389)
chr2 (421-470)||(43205204-43205253)
chr2 (398-466)||(6328782-6328849)
chr2 (551-583)||(33559637-33559669)
chr2 (402-470)||(34141554-34141622)
chr2 (548-583)||(24727424-24727459)
chr2 (548-583)||(27538943-27538978)
chr2 (548-583)||(44897624-44897659)
chr2 (548-582)||(5852473-5852507)
chr2 (395-469)||(13711173-13711246)
chr2 (555-593)||(21738661-21738699)
chr2 (548-590)||(43650587-43650629)
chr2 (555-584)||(4344446-4344475)
chr2 (548-581)||(6666020-6666053)
chr2 (548-581)||(7498029-7498062)
chr2 (548-581)||(12208442-12208475)
chr2 (554-583)||(12784443-12784472)
chr2 (421-470)||(13881206-13881255)
chr2 (421-470)||(14021331-14021380)
chr2 (555-584)||(18749408-18749437)
chr2 (548-581)||(22296156-22296189)
chr2 (404-469)||(28679239-28679304)
chr2 (548-581)||(30339993-30340026)
chr2 (397-470)||(32755789-32755862)
chr2 (555-584)||(35792673-35792702)
chr2 (421-470)||(38533109-38533158)
chr2 (421-470)||(41156914-41156963)
[»] chr5 (33 HSPs)
chr5 (402-470)||(3518294-3518362)
chr5 (402-470)||(10469839-10469907)
chr5 (402-470)||(31625968-31626036)
chr5 (395-470)||(1108109-1108188)
chr5 (402-468)||(35358827-35358893)
chr5 (402-470)||(8761758-8761826)
chr5 (404-470)||(12612911-12612977)
chr5 (417-470)||(5005224-5005277)
chr5 (397-470)||(29765942-29766015)
chr5 (404-470)||(43152954-43153020)
chr5 (402-467)||(34698890-34698954)
chr5 (394-470)||(17574108-17574184)
chr5 (396-470)||(37821027-37821101)
chr5 (421-470)||(38919957-38920006)
chr5 (402-470)||(35616693-35616761)
chr5 (404-470)||(8442270-8442336)
chr5 (548-581)||(29765830-29765863)
chr5 (421-469)||(12203257-12203305)
chr5 (431-470)||(5043036-5043075)
chr5 (420-470)||(9940165-9940215)
chr5 (555-585)||(16143386-16143416)
chr5 (555-585)||(22098251-22098281)
chr5 (555-585)||(36416107-36416137)
chr5 (548-582)||(38387609-38387643)
chr5 (548-581)||(3031834-3031867)
chr5 (548-581)||(12203158-12203191)
chr5 (548-581)||(14523002-14523035)
chr5 (548-581)||(18729327-18729360)
chr5 (548-581)||(25585494-25585527)
chr5 (548-581)||(39032642-39032675)
chr5 (421-470)||(40201031-40201080)
chr5 (555-584)||(40829411-40829440)
chr5 (555-584)||(42699054-42699083)
[»] chr3 (51 HSPs)
chr3 (394-470)||(2280288-2280364)
chr3 (402-470)||(29533872-29533940)
chr3 (404-470)||(50025579-50025645)
chr3 (393-466)||(42643352-42643425)
chr3 (397-469)||(14847405-14847477)
chr3 (402-470)||(16295575-16295643)
chr3 (402-469)||(9557824-9557891)
chr3 (397-469)||(38471754-38471826)
chr3 (404-466)||(47140569-47140631)
chr3 (402-469)||(1261267-1261334)
chr3 (396-469)||(36301096-36301167)
chr3 (404-469)||(33971995-33972060)
chr3 (402-470)||(33074984-33075052)
chr3 (397-470)||(10565163-10565235)
chr3 (402-467)||(34208381-34208446)
chr3 (399-467)||(25559818-25559886)
chr3 (395-470)||(9027724-9027799)
chr3 (404-470)||(43149237-43149303)
chr3 (396-469)||(43900884-43900957)
chr3 (394-470)||(43220026-43220102)
chr3 (402-467)||(884651-884716)
chr3 (548-581)||(2280177-2280210)
chr3 (421-470)||(49361748-49361797)
chr3 (392-445)||(52383135-52383188)
chr3 (404-460)||(31763928-31763984)
chr3 (414-470)||(51385344-51385400)
chr3 (392-432)||(52381252-52381292)
chr3 (555-590)||(6178470-6178505)
chr3 (427-470)||(21481875-21481918)
chr3 (396-467)||(50294011-50294081)
chr3 (396-470)||(2935397-2935471)
chr3 (394-440)||(3210560-3210606)
chr3 (555-585)||(7949787-7949817)
chr3 (554-584)||(19418201-19418231)
chr3 (399-469)||(32152005-32152075)
chr3 (555-593)||(37894288-37894326)
chr3 (548-582)||(38296700-38296734)
chr3 (404-470)||(47683901-47683967)
chr3 (404-470)||(48117447-48117513)
chr3 (428-470)||(50879706-50879748)
chr3 (555-584)||(462446-462475)
chr3 (421-470)||(9158947-9158996)
chr3 (548-581)||(9159074-9159107)
chr3 (548-581)||(14839083-14839116)
chr3 (554-583)||(23869011-23869040)
chr3 (404-453)||(27276862-27276911)
chr3 (548-581)||(29057659-29057692)
chr3 (548-581)||(29846918-29846951)
chr3 (555-584)||(41877685-41877714)
chr3 (555-584)||(51771484-51771513)
chr3 (555-584)||(52100258-52100287)
[»] chr1 (47 HSPs)
chr1 (394-470)||(46903581-46903657)
chr1 (393-470)||(31666089-31666166)
chr1 (402-466)||(27787604-27787668)
chr1 (397-469)||(37741839-37741911)
chr1 (397-466)||(644811-644880)
chr1 (402-469)||(6396439-6396506)
chr1 (402-469)||(21446110-21446177)
chr1 (396-469)||(43757698-43757771)
chr1 (402-470)||(2827602-2827670)
chr1 (402-470)||(49615167-49615235)
chr1 (396-470)||(40053017-40053091)
chr1 (396-469)||(24158762-24158835)
chr1 (402-470)||(28457239-28457307)
chr1 (395-470)||(31244620-31244695)
chr1 (396-470)||(8577388-8577462)
chr1 (404-470)||(37947114-37947180)
chr1 (420-469)||(51436342-51436390)
chr1 (394-470)||(19920873-19920949)
chr1 (397-463)||(8312263-8312329)
chr1 (398-469)||(11121592-11121663)
chr1 (399-470)||(30596825-30596896)
chr1 (406-470)||(44714352-44714418)
chr1 (548-584)||(12990507-12990543)
chr1 (548-583)||(16252786-16252821)
chr1 (398-469)||(27895649-27895720)
chr1 (395-470)||(41564765-41564840)
chr1 (392-470)||(23399871-23399949)
chr1 (440-470)||(27954339-27954369)
chr1 (420-470)||(43105216-43105266)
chr1 (555-593)||(51718661-51718699)
chr1 (421-470)||(835982-836031)
chr1 (548-581)||(1100217-1100250)
chr1 (421-470)||(1100328-1100377)
chr1 (402-455)||(21263149-21263202)
chr1 (548-581)||(22331366-22331399)
chr1 (555-588)||(23400034-23400067)
chr1 (548-589)||(26760554-26760595)
chr1 (548-581)||(30414875-30414908)
chr1 (556-585)||(30687048-30687077)
chr1 (554-583)||(40139124-40139153)
chr1 (548-581)||(41564918-41564951)
chr1 (555-584)||(47059924-47059953)
chr1 (440-469)||(48028638-48028667)
chr1 (555-584)||(49020449-49020478)
chr1 (548-581)||(49596235-49596268)
chr1 (554-583)||(49699796-49699825)
chr1 (549-582)||(51250314-51250347)
[»] chr4 (43 HSPs)
chr4 (391-470)||(46309004-46309083)
chr4 (404-469)||(4949128-4949193)
chr4 (402-470)||(1987605-1987673)
chr4 (402-470)||(9827877-9827945)
chr4 (402-470)||(34538041-34538109)
chr4 (397-470)||(30250185-30250258)
chr4 (402-461)||(26442280-26442339)
chr4 (396-470)||(46799866-46799940)
chr4 (393-450)||(46686356-46686413)
chr4 (398-470)||(43983008-43983080)
chr4 (395-469)||(29863663-29863737)
chr4 (402-460)||(36946984-36947042)
chr4 (397-470)||(37732060-37732133)
chr4 (395-470)||(4878078-4878153)
chr4 (402-460)||(6093497-6093555)
chr4 (403-469)||(31318860-31318926)
chr4 (404-470)||(45678374-45678440)
chr4 (548-581)||(1987751-1987784)
chr4 (548-581)||(9828010-9828043)
chr4 (396-445)||(35037718-35037767)
chr4 (433-470)||(54801410-54801447)
chr4 (396-453)||(55960828-55960885)
chr4 (548-584)||(24310548-24310584)
chr4 (548-583)||(7795023-7795058)
chr4 (398-469)||(21766659-21766730)
chr4 (395-470)||(50291393-50291468)
chr4 (435-470)||(54803255-54803290)
chr4 (404-470)||(33777005-33777071)
chr4 (397-467)||(46791878-46791948)
chr4 (548-581)||(1868920-1868953)
chr4 (554-583)||(3475867-3475896)
chr4 (548-581)||(4577557-4577590)
chr4 (421-470)||(8487746-8487795)
chr4 (397-470)||(18944396-18944469)
chr4 (548-581)||(26442428-26442461)
chr4 (548-581)||(27384187-27384220)
chr4 (548-581)||(31318753-31318786)
chr4 (555-584)||(33776858-33776887)
chr4 (421-470)||(37775338-37775387)
chr4 (421-470)||(46355202-46355251)
chr4 (559-596)||(51389123-51389160)
chr4 (397-466)||(51389431-51389499)
chr4 (548-581)||(54165199-54165232)
[»] chr6 (14 HSPs)
chr6 (396-470)||(34976727-34976801)
chr6 (396-469)||(3335344-3335417)
chr6 (394-470)||(608545-608621)
chr6 (402-469)||(35050283-35050350)
chr6 (420-466)||(22422265-22422311)
chr6 (397-470)||(7303992-7304065)
chr6 (548-585)||(27790273-27790310)
chr6 (548-583)||(16121161-16121196)
chr6 (555-586)||(16743311-16743342)
chr6 (554-596)||(21857611-21857653)
chr6 (548-581)||(2165327-2165360)
chr6 (548-581)||(2176960-2176993)
chr6 (421-470)||(6997461-6997510)
chr6 (548-581)||(19789114-19789147)
[»] scaffold0592 (1 HSPs)
scaffold0592 (406-470)||(1021-1085)
[»] scaffold0036 (1 HSPs)
scaffold0036 (402-470)||(54554-54622)
[»] scaffold0542 (1 HSPs)
scaffold0542 (394-467)||(2955-3028)
[»] scaffold0651 (2 HSPs)
scaffold0651 (403-469)||(4744-4810)
scaffold0651 (548-581)||(4884-4917)
[»] scaffold0172 (1 HSPs)
scaffold0172 (548-585)||(16971-17008)
[»] scaffold0014 (2 HSPs)
scaffold0014 (402-470)||(145158-145226)
scaffold0014 (548-581)||(145061-145094)
[»] scaffold0148 (1 HSPs)
scaffold0148 (548-582)||(21483-21517)
[»] scaffold0058 (1 HSPs)
scaffold0058 (404-470)||(3054-3120)
[»] scaffold0020 (1 HSPs)
scaffold0020 (548-582)||(155905-155939)
[»] scaffold0286 (1 HSPs)
scaffold0286 (548-581)||(17049-17082)
[»] scaffold0024 (1 HSPs)
scaffold0024 (548-581)||(60469-60502)


Alignment Details
Target: chr8 (Bit Score: 150; Significance: 9e-79; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 9e-79
Query Start/End: Original strand, 114 - 371
Target Start/End: Complemental strand, 29165619 - 29165365
Alignment:
Q  114 aaggtagaaaatttagagaattcagacttttacccgaatgtgatcgttggcatcaaaatcaatagcccaaggaccaatcgaaagcaaataagagagacaa 213  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||    ||||||||||||| || |||||||||||| |||||    
T  29165619 aaggtagaaaatttagagaattaagacttttacccgaatgtgattgttggcatgaaaatca----cccaaggaccaattgacagcaaataagagggacaa 29165524  T
Q  214 gttaaggaattgccattgtatacggcaatgaaacctgaggtgtaacactctttaaataaaaataaaaaggattgcgat----agagtcgggggctggcat 309  Q
    |||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||    ||||||| ||||||||||    
T  29165523 gttatggaattaccattgtatacggcaataaaacctgaggtgtaacactctttaaataaaattaaaaaggattgtgatagtgagagtcgagggctggcat 29165424  T
Q  310 tccttgaattaggggcctgagtgaatccagtgtcttacacagcagagctctattttgtgtgt 371  Q
    ||||||||||||||||||||| |||||||||||||  ||   |||||||| |||||||||||    
T  29165423 tccttgaattaggggcctgagcgaatccagtgtctatca---cagagctcaattttgtgtgt 29165365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 582 - 799
Target Start/End: Complemental strand, 29165349 - 29165127
Alignment:
Q  582 attataaaaagataagcatcagcttatttgctatatttacatgctattgtacaatcacaattattctgtgtatgttatttctaacattatatttctt--- 678  Q
    ||||||||||||||| ||| | ||||||||||||||||||||| || ||||| |||| |||||| |||| |||||||||||||||  ||||||||||       
T  29165349 attataaaaagataaacattaccttatttgctatatttacatgatactgtactatcataattatactgtatatgttatttctaactgtatatttcttgtt 29165250  T
Q  679 --ttcttttttccaggatgatgaagttggttttgcttatgtaagtcagcgtgaagctcgcccgtctccgtatgagcatcaaaccatatattatttgtcta 776  Q
      || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29165249 tttttttttttccaggatgaagaagttggttttgcttatgtaagtcagcgtgaagctcgcccgtctctgtatgagcatcaaaccatatattatttgtcta 29165150  T
Q  777 ggcctaattaactttgggattcc 799  Q
    |||||||||||||||||||||||    
T  29165149 ggcctaattaactttgggattcc 29165127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 396 - 470
Target Start/End: Original strand, 5742543 - 5742617
Alignment:
Q  396 aagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  5742543 aagagtagtgatattttgacaaccattttggtacatcctttgagacaactttgttgttctctcttctcattggtc 5742617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 402 - 469
Target Start/End: Original strand, 38939084 - 38939151
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  38939084 agtgatattttgacaaccattttggtacaatttttgagataactttgttgttctctcttctcattggt 38939151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 45405720 - 45405795
Alignment:
Q  395 aaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||| ||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  45405720 aaagagtagtgatattttaacaaccattttggtacaacctttgagacaactttattgttctctcttctcattggtc 45405795  T

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Target: chr8; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 28156382 - 28156314
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  28156382 agtgatattttgacaactattttagtacaacctttgagacaactttgttgttctctcttctcattggtc 28156314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 395 - 469
Target Start/End: Original strand, 32674117 - 32674191
Alignment:
Q  395 aaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    |||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||| || ||||||||||||    
T  32674117 aaagagtagtgatattttgacaaccattttagtacaacctttgagacaactttgttgttatcccttctcattggt 32674191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 42651097 - 42651032
Alignment:
Q  404 tgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    ||||||||  ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42651097 tgatatttgaacaactattttggtacaacttttgagacaaccttgttgttctctcttctcattggt 42651032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 403 - 470
Target Start/End: Complemental strand, 33635753 - 33635686
Alignment:
Q  403 gtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||||||||||||||  |||||  ||||||| |||||| ||||||||||||||||||||||    
T  33635753 gtgatattttgacaaccattttaatacaatctttgagataactttattgttctctcttctcattggtc 33635686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 420 - 469
Target Start/End: Original strand, 14233554 - 14233603
Alignment:
Q  420 attttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  14233554 attttggtataacttttgtgacaactttgttgttctctcttctcattggt 14233603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 404 - 467
Target Start/End: Original strand, 34578231 - 34578294
Alignment:
Q  404 tgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattg 467  Q
    ||||||||| ||||| ||||||||| || ||||| |||||||||||||||||||||||| ||||    
T  34578231 tgatattttaacaactattttggtataatttttgggacaactttgttgttctctcttcttattg 34578294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 390 - 469
Target Start/End: Original strand, 29910093 - 29910171
Alignment:
Q  390 ttataaaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    ||||||||||| |||||||| |||||||||||||| | ||||||||   |||||||||  | ||||||||||||||||||    
T  29910093 ttataaaagagtagtgatatattgacaaccatttttg-acaactttgttgacaacttttattttctctcttctcattggt 29910171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 800 - 846
Target Start/End: Complemental strand, 29165107 - 29165061
Alignment:
Q  800 cttttcttctggaattcaaaatattgtatagtcgtcctggttactca 846  Q
    |||||||||| ||||||||||| ||||| ||||||||||||||||||    
T  29165107 cttttcttcttgaattcaaaattttgtaaagtcgtcctggttactca 29165061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 404 - 470
Target Start/End: Complemental strand, 34247951 - 34247885
Alignment:
Q  404 tgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||  |||||| |||||  |||||||||| |||||| ||||||||||||||| |||||||||    
T  34247951 tgatatttgtacaacccttttgagacaacttttgggacaaccttgttgttctctcttttcattggtc 34247885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 34883341 - 34883283
Alignment:
Q  404 tgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttct 462  Q
    ||||||||  ||||| ||||| ||||||||||||| ||||| |||||||||||||||||    
T  34883341 tgatatttaaacaactattttagtacaacttttgatacaaccttgttgttctctcttct 34883283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 397 - 470
Target Start/End: Complemental strand, 25430830 - 25430757
Alignment:
Q  397 agagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||| ||||||||||  |||||  ||||||||||||||||| |||||| |||||||  |||||||| |||||||    
T  25430830 agagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctcttcttattggtc 25430757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 397 - 470
Target Start/End: Original strand, 34838157 - 34838230
Alignment:
Q  397 agagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||||||||||||  |||||  ||||||||||||||||  |||||| |||||||  |||||||| |||||||    
T  34838157 agagcagtgatatttgaacaactcttttggtacaacttttaggacaaccttgttgtgttctcttcttattggtc 34838230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 421 - 469
Target Start/End: Complemental strand, 13924169 - 13924121
Alignment:
Q  421 ttttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    ||||||||||||||||| |||||  ||||||| ||||||||||||||||    
T  13924169 ttttggtacaacttttgtgacaatcttgttgtcctctcttctcattggt 13924121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 548 - 584
Target Start/End: Complemental strand, 27300379 - 27300343
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctcatt 584  Q
    |||||| ||||||||||||||||||||||||||||||    
T  27300379 ttgtacaaaaatggttgtacaaatatcatttctcatt 27300343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 394 - 470
Target Start/End: Complemental strand, 41776362 - 41776286
Alignment:
Q  394 aaaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||| | ||||||||  |||||  ||||| ||||||||||| |||||| ||||||| ||||||| |||||||||    
T  41776362 aaaagagtaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtc 41776286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 420 - 467
Target Start/End: Original strand, 3394612 - 3394659
Alignment:
Q  420 attttggtacaacttttgagacaactttgttgttctctcttctcattg 467  Q
    |||||| || |||||||| ||||||||| |||||||||||||||||||    
T  3394612 attttgatataacttttgggacaactttattgttctctcttctcattg 3394659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 404 - 467
Target Start/End: Complemental strand, 18550156 - 18550093
Alignment:
Q  404 tgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattg 467  Q
    ||||||||  ||||| |||||||||||||||||| |||||| |||||||  |||||||| ||||    
T  18550156 tgatatttgaacaactattttggtacaacttttgggacaaccttgttgtgttctcttcttattg 18550093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 586
Target Start/End: Original strand, 21273755 - 21273786
Alignment:
Q  555 aaaatggttgtacaaatatcatttctcattat 586  Q
    ||||||||||||||||||||||||||||||||    
T  21273755 aaaatggttgtacaaatatcatttctcattat 21273786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 28713279 - 28713204
Alignment:
Q  395 aaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||| ||||||||||  |||||  ||||||||||| ||||| |||||| |||||||  |||||||| |||||||    
T  28713279 aaagagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttgtattctcttcttattggtc 28713204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 28720626 - 28720551
Alignment:
Q  395 aaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||| ||||||||||  |||||  ||||||||||| ||||| |||||| |||||||  |||||||| |||||||    
T  28720626 aaagagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttgtattctcttcttattggtc 28720551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 28728268 - 28728193
Alignment:
Q  395 aaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||| ||||||||||  |||||  ||||||||||| ||||| |||||| |||||||  |||||||| |||||||    
T  28728268 aaagagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttgtattctcttcttattggtc 28728193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 420 - 470
Target Start/End: Original strand, 8233406 - 8233456
Alignment:
Q  420 attttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||| |||||||||||  || ||| |||||||||||||||||||||||||    
T  8233406 atttttgtacaactttttggataaccttgttgttctctcttctcattggtc 8233456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 21649206 - 21649240
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctca 582  Q
    |||||| ||||||||||||||||||||||||||||    
T  21649206 ttgtacaaaaatggttgtacaaatatcatttctca 21649240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 396 - 470
Target Start/End: Original strand, 22203101 - 22203175
Alignment:
Q  396 aagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||| ||||||||  |||||  ||||| ||||||||||| |||||| ||||||| ||||||| | |||||||    
T  22203101 aagagcaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttgattggtc 22203175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 548 - 582
Target Start/End: Complemental strand, 36675369 - 36675335
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctca 582  Q
    |||||| ||||||||||||||||||||||||||||    
T  36675369 ttgtacaaaaatggttgtacaaatatcatttctca 36675335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 5742695 - 5742728
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  5742695 ttgtaccaaaatggttgtacaaatatcatttctc 5742728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 6243194 - 6243145
Alignment:
Q  421 ttttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||| ||||||||||| ||||| |||||||| ||||||| |||||||||    
T  6243194 ttttgctacaacttttgggacaattttgttgtgctctcttttcattggtc 6243145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 554 - 591
Target Start/End: Complemental strand, 6445202 - 6445165
Alignment:
Q  554 taaaatggttgtacaaatatcatttctcattataaaaa 591  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  6445202 taaaatggttgtacaaatatcatctctctttataaaaa 6445165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 13924055 - 13924022
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  13924055 ttgtacaaaaatggttgtacaaatatcatttctc 13924022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 22203253 - 22203286
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  22203253 ttgtacaaaaatggttgtacaaatatcatttctc 22203286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 553 - 582
Target Start/End: Original strand, 22960460 - 22960489
Alignment:
Q  553 ctaaaatggttgtacaaatatcatttctca 582  Q
    ||||||||||||||||||||||||||||||    
T  22960460 ctaaaatggttgtacaaatatcatttctca 22960489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 25430690 - 25430657
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  25430690 ttgtacaaaaatggttgtacaaatatcatttctc 25430657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 28156236 - 28156203
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  28156236 ttgtaccaaaatggttgtacaaatatcatttctc 28156203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 34578415 - 34578448
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  34578415 ttgtacaaaaatggttgtacaaatatcatttctc 34578448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 35701865 - 35701898
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  35701865 ttgtacaaaaatggttgtacaaatatcatttctc 35701898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 3e-29; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 396 - 470
Target Start/End: Original strand, 2600420 - 2600494
Alignment:
Q  396 aagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2600420 aagagtagtgatattttgacaaccattttggtacaacctttgagacaactttgttgttctctcttctcattggtc 2600494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 37970112 - 37970044
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37970112 agtgatattttaacaaccattttggtacaacatttgagacaactttgttgttctctcttctcattggtc 37970044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 47379739 - 47379672
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  47379739 agtgatattttgacaactattttggtgcaacttttgagacaactttgttgttctctcttctcattggt 47379672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 393 - 470
Target Start/End: Complemental strand, 640580 - 640503
Alignment:
Q  393 taaaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||| ||| |||||||||||||||| |||||||||| ||  |||||||||||||||||||||||||||||||||||||    
T  640580 taaatgagtagtgatattttgacaatcattttggtataatctttgagacaactttgttgttctctcttctcattggtc 640503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 398 - 467
Target Start/End: Original strand, 41458788 - 41458857
Alignment:
Q  398 gagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattg 467  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||    
T  41458788 gagcaatgatattttgacaatcattttggtacaacttttgagacaactttgttgttctcttttttcattg 41458857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 396 - 470
Target Start/End: Complemental strand, 11070413 - 11070339
Alignment:
Q  396 aagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||| |||||||||||||||| |||||||||| ||  ||||||||||||||||| ||||||||| |||||||||    
T  11070413 aagagtagtgatattttgacaatcattttggtagaatctttgagacaactttgttcttctctcttttcattggtc 11070339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 399 - 469
Target Start/End: Original strand, 28548124 - 28548194
Alignment:
Q  399 agcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    |||||||||||||| ||||||||||| ||||||  |||||||||||||| |||||||||||||| ||||||    
T  28548124 agcagtgatattttaacaaccattttagtacaatctttgagacaactttattgttctctcttcttattggt 28548194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 384735 - 384663
Alignment:
Q  397 agagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    |||| ||||||||||| | || ||||||| |||||| ||||||||||||||||| ||||||||||||||||||    
T  384735 agagtagtgatattttaaaaatcattttgatacaacctttgagacaactttgttattctctcttctcattggt 384663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 397 - 470
Target Start/End: Complemental strand, 44185360 - 44185287
Alignment:
Q  397 agagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||| ||||||||||  |||||  ||||| |||||||||||||||||| |  ||||||||||||||||||||||    
T  44185360 agaggagtgatatttgaacaactcttttgatacaacttttgagacaacctcattgttctctcttctcattggtc 44185287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 548 - 583
Target Start/End: Original strand, 2600572 - 2600607
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctcat 583  Q
    ||||||||||||||||||||||||||||||||||||    
T  2600572 ttgtactaaaatggttgtacaaatatcatttctcat 2600607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 548 - 583
Target Start/End: Complemental strand, 7295483 - 7295448
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctcat 583  Q
    ||||||||||||||||||||||||||||||||||||    
T  7295483 ttgtactaaaatggttgtacaaatatcatttctcat 7295448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 11789729 - 11789763
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctca 582  Q
    |||||||||||||||||||||||||||||||||||    
T  11789729 ttgtactaaaatggttgtacaaatatcatttctca 11789763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 393 - 443
Target Start/End: Complemental strand, 32747420 - 32747370
Alignment:
Q  393 taaaagagcagtgatattttgacaaccattttggtacaacttttgagacaa 443  Q
    |||||||| | ||||||||||||||||||||||||| ||| ||||||||||    
T  32747420 taaaagagtattgatattttgacaaccattttggtataacctttgagacaa 32747370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 23034205 - 23034273
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||  |||||  ||||||||||||||||| |||||| ||||||| |||| |||| |||||||    
T  23034205 agtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgtgctcttttcttattggtc 23034273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 27704614 - 27704546
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||  |||||  ||||| ||||||||||| ||||||||||||||  |||||||| |||||||    
T  27704614 agtgatatttgaacaactcttttgttacaacttttgggacaactttgttgtgttctcttcttattggtc 27704546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 548 - 584
Target Start/End: Original strand, 27866564 - 27866600
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctcatt 584  Q
    |||||| ||||||||||||||||||||||||||||||    
T  27866564 ttgtacaaaaatggttgtacaaatatcatttctcatt 27866600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 583
Target Start/End: Complemental strand, 25272635 - 25272600
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctcat 583  Q
    |||||| |||||||||||||||||||||||||||||    
T  25272635 ttgtacaaaaatggttgtacaaatatcatttctcat 25272600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 583
Target Start/End: Original strand, 33465066 - 33465101
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctcat 583  Q
    |||||| |||||||||||||||||||||||||||||    
T  33465066 ttgtacaaaaatggttgtacaaatatcatttctcat 33465101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 469
Target Start/End: Complemental strand, 39369485 - 39369414
Alignment:
Q  398 gagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    ||||| ||||||||||||| ||||||  | |||||||| | |||||||||||| |||||| |||| ||||||    
T  39369485 gagcaatgatattttgacatccatttaaggacaactttagtgacaactttgtttttctcttttcttattggt 39369414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 47945169 - 47945094
Alignment:
Q  395 aaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||| ||||||||||  |||||  ||||| ||||||||||| |||||| |||||||  |||||||| |||||||    
T  47945169 aaagagtagtgatatttgaacaactcttttgatacaacttttgggacaaccttgttgtgttctcttcttattggtc 47945094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 47950599 - 47950524
Alignment:
Q  395 aaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||| ||||||||||  |||||  ||||| ||||||||||| |||||| |||||||  |||||||| |||||||    
T  47950599 aaagagtagtgatatttgaacaactcttttgatacaacttttgggacaaccttgttgtgttctcttcttattggtc 47950524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 551 - 581
Target Start/End: Complemental strand, 11070258 - 11070228
Alignment:
Q  551 tactaaaatggttgtacaaatatcatttctc 581  Q
    |||||||||||||||||||||||||||||||    
T  11070258 tactaaaatggttgtacaaatatcatttctc 11070228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 409 - 467
Target Start/End: Original strand, 33341024 - 33341082
Alignment:
Q  409 ttttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattg 467  Q
    |||||||||| ||||||||| ||  |||||||||||||||||||| |  ||||||||||    
T  33341024 ttttgacaactattttggtataatgtttgagacaactttgttgttttaccttctcattg 33341082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 41458938 - 41458972
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctca 582  Q
    |||||||||||||||||||||||||| ||||||||    
T  41458938 ttgtactaaaatggttgtacaaatattatttctca 41458972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 555 - 584
Target Start/End: Complemental strand, 33050209 - 33050180
Alignment:
Q  555 aaaatggttgtacaaatatcatttctcatt 584  Q
    ||||||||||||||||||||||||||||||    
T  33050209 aaaatggttgtacaaatatcatttctcatt 33050180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 585
Target Start/End: Original strand, 34349065 - 34349102
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctcatta 585  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  34349065 ttgtacaaaaatggttgtacaaatatcatttcttatta 34349102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 440 - 469
Target Start/End: Original strand, 35212887 - 35212916
Alignment:
Q  440 acaactttgttgttctctcttctcattggt 469  Q
    ||||||||||||||||||||||||||||||    
T  35212887 acaactttgttgttctctcttctcattggt 35212916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 402 - 467
Target Start/End: Complemental strand, 36108350 - 36108286
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattg 467  Q
    ||||||||||| ||||| |||||||||| || |||||||||||||| ||||| ||| || ||||||    
T  36108350 agtgatattttaacaactattttggtac-acctttgagacaactttattgttatctattttcattg 36108286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 585
Target Start/End: Original strand, 40207838 - 40207875
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctcatta 585  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  40207838 ttgtacaaaaatagttgtacaaatatcatttctcatta 40207875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 41538515 - 41538482
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  41538515 ttgtacaaaaatggttgtacaaatatcatttctc 41538482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 45336023 - 45335974
Alignment:
Q  421 ttttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||| ||||| |||||| ||||||||||||||| | |||||||    
T  45336023 ttttggtacaaattttgggacaaccttgttgttctctctttttattggtc 45335974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 48522189 - 48522156
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  48522189 ttgtacaaaaatggttgtacaaatatcatttctc 48522156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 48639421 - 48639454
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  48639421 ttgtacaaaaatggttgtacaaatatcatttctc 48639454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 3e-29; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 395 - 469
Target Start/End: Complemental strand, 40721957 - 40721883
Alignment:
Q  395 aaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40721957 aaagagtagtgatattttgacaaccattttggtacaacctttgagacaactttgttgttctctcttctcattggt 40721883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 396 - 470
Target Start/End: Complemental strand, 34373193 - 34373119
Alignment:
Q  396 aagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  34373193 aagagtagtgatattttgacaaccattttggtataacctttgagacaactttgttgttctctcttctcattggtc 34373119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 390 - 470
Target Start/End: Original strand, 38724197 - 38724277
Alignment:
Q  390 ttataaaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  38724197 ttatataagagtagtgatattttgacaaccattttggtacaacctttgagacaactttgttgttctctctattcattggtc 38724277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 43026115 - 43026048
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  43026115 agtgatattttgacaatcattttggtacaacctttgagacaactttgttgttctctcttctcattggt 43026048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 394 - 470
Target Start/End: Complemental strand, 25094539 - 25094463
Alignment:
Q  394 aaaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||||| |||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||| |||||||    
T  25094539 aaaagagcggtgatattttgacaaccattttagtacaatctttgagacaactttgttgttctctcttctaattggtc 25094463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 399 - 470
Target Start/End: Original strand, 13850073 - 13850144
Alignment:
Q  399 agcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||| |||||||||    
T  13850073 agcagtgatattttgacaactattttggtataacttttgagacaattttgttgttctctcttttcattggtc 13850144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 389 - 470
Target Start/End: Complemental strand, 4858305 - 4858224
Alignment:
Q  389 attataaaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||| |||| || |||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||| |||||||||    
T  4858305 attaaaaaaaagtagtgatattttgacaatcattttggtacaacctttgagacaattttgttgttctctcttttcattggtc 4858224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 394 - 470
Target Start/End: Original strand, 304876 - 304952
Alignment:
Q  394 aaaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||||  |||||||||| |||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||    
T  304876 aaaagagttgtgatattttaacaaccattttgatacaacctttgagacaactttgttgttcactcttctcattggtc 304952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 1151708 - 1151640
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| || |||||||||    
T  1151708 agtgatattttgacaactattttggtacaacctttgagacaactttgttgttctcttttttcattggtc 1151640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 27329001 - 27329069
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  27329001 agtgatattttaacaacaattttggtacatcttttgagacaactttgttgttctcttttctcattggtc 27329069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 397 - 460
Target Start/End: Complemental strand, 24727586 - 24727523
Alignment:
Q  397 agagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctctt 460  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  24727586 agagtagtgatattttgacaaccattttggtacaacctttgagacaactttattgttctctctt 24727523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 9377652 - 9377718
Alignment:
Q  404 tgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||    
T  9377652 tgatattttaacaaccattttggtataacctttgagacaactttgttgttctctcttcttattggtc 9377718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 393 - 470
Target Start/End: Complemental strand, 23141542 - 23141465
Alignment:
Q  393 taaaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||| ||| ||||||||||  |||||  ||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  23141542 taaaggagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgttctctcttctcattggtc 23141465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 393 - 470
Target Start/End: Complemental strand, 23553332 - 23553255
Alignment:
Q  393 taaaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||| ||| ||||||||||  |||||  ||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  23553332 taaaggagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgttctctcttctcattggtc 23553255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 30340173 - 30340105
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||  |||||  ||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  30340173 agtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgttctctcttctcattggtc 30340105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 398 - 470
Target Start/End: Original strand, 37827673 - 37827745
Alignment:
Q  398 gagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||||||| ||||  ||||||||||||  ||| ||||||||||||||||||||||| |||||||||    
T  37827673 gagcagtgatattttaacaattattttggtacaatctttaagacaactttgttgttctctcttttcattggtc 37827745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 404 - 470
Target Start/End: Complemental strand, 35518452 - 35518386
Alignment:
Q  404 tgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||  ||||| |||||| ||||||||||| |||||||||||||||||||||||| |||||||    
T  35518452 tgatatttgaacaactattttgatacaacttttgggacaactttgttgttctctcttcttattggtc 35518386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 11728013 - 11728081
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||| |||| |||||||||||||  ||| |||||||||||||||| |||||| |||||||||    
T  11728013 agtgatattttaacaatcattttggtacaatctttaagacaactttgttgttttctcttttcattggtc 11728081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 396 - 459
Target Start/End: Complemental strand, 33569753 - 33569690
Alignment:
Q  396 aagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctct 459  Q
    |||||||||| |||||  |||||  |||||||||||||||||||||||||||||| ||||||||    
T  33569753 aagagcagtgttatttgaacaactcttttggtacaacttttgagacaactttgttattctctct 33569690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 404 - 470
Target Start/End: Complemental strand, 8757721 - 8757655
Alignment:
Q  404 tgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||  ||||| ||||||||||||||||||  ||||| ||||||||||||||||| |||||||    
T  8757721 tgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttattggtc 8757655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 394 - 469
Target Start/End: Original strand, 24491561 - 24491636
Alignment:
Q  394 aaaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    ||||||||||||||||||  ||||   ||||| |||||||||||||||||  || |||||||||||||| ||||||    
T  24491561 aaaagagcagtgatatttgaacaattcttttgatacaacttttgagacaatcttattgttctctcttcttattggt 24491636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 37064218 - 37064169
Alignment:
Q  421 ttttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||||||||| || ||| |||||||| ||||||||||||||||    
T  37064218 ttttggtacaacttttgggataaccttgttgttttctcttctcattggtc 37064169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 592
Target Start/End: Original strand, 38724348 - 38724389
Alignment:
Q  551 tactaaaatggttgtacaaatatcatttctcattataaaaag 592  Q
    ||||||||||||||||||||||||||||||| ||||| ||||    
T  38724348 tactaaaatggttgtacaaatatcatttctctttatataaag 38724389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 43205253 - 43205204
Alignment:
Q  421 ttttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||| ||||||||||| |||||||||||||| ||||||| |||||||||    
T  43205253 ttttgctacaacttttgggacaactttgttgtgctctcttttcattggtc 43205204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 398 - 466
Target Start/End: Complemental strand, 6328849 - 6328782
Alignment:
Q  398 gagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcatt 466  Q
    |||||||||||||||||||| |||||||||| ||| |||| || || ||| ||||| ||||||||||||    
T  6328849 gagcagtgatattttgacaatcattttggtataacctttgggataa-tttattgttatctcttctcatt 6328782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 551 - 583
Target Start/End: Complemental strand, 33559669 - 33559637
Alignment:
Q  551 tactaaaatggttgtacaaatatcatttctcat 583  Q
    |||||||||||||||||||||||||||||||||    
T  33559669 tactaaaatggttgtacaaatatcatttctcat 33559637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 34141622 - 34141554
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||  |||||  |||||||||||||||||  |||||||||||||  |||||||| |||||||    
T  34141622 agtgatatttgaacaactcttttggtacaacttttggaacaactttgttgtgttctcttcttattggtc 34141554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 583
Target Start/End: Complemental strand, 24727459 - 24727424
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctcat 583  Q
    |||||| |||||||||||||||||||||||||||||    
T  24727459 ttgtaccaaaatggttgtacaaatatcatttctcat 24727424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 583
Target Start/End: Original strand, 27538943 - 27538978
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctcat 583  Q
    |||||| |||||||||||||||||||||||||||||    
T  27538943 ttgtacaaaaatggttgtacaaatatcatttctcat 27538978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 583
Target Start/End: Complemental strand, 44897659 - 44897624
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctcat 583  Q
    |||||| |||||||||||||||||||||||||||||    
T  44897659 ttgtacaaaaatggttgtacaaatatcatttctcat 44897624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 548 - 582
Target Start/End: Complemental strand, 5852507 - 5852473
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctca 582  Q
    |||||| ||||||||||||||||||||||||||||    
T  5852507 ttgtacaaaaatggttgtacaaatatcatttctca 5852473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 395 - 469
Target Start/End: Complemental strand, 13711246 - 13711173
Alignment:
Q  395 aaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    |||||| ||||||||||  ||||| |||||| ||||||||||| ||||||||  || ||||||||| ||||||||    
T  13711246 aaagagtagtgatatttgaacaactattttg-tacaacttttgtgacaacttcttttttctctcttttcattggt 13711173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 555 - 593
Target Start/End: Original strand, 21738661 - 21738699
Alignment:
Q  555 aaaatggttgtacaaatatcatttctcattataaaaaga 593  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  21738661 aaaatggttgtacaaatatcatttctcataattaaaaga 21738699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 548 - 590
Target Start/End: Original strand, 43650587 - 43650629
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctcattataaaa 590  Q
    ||||| |||| || |||||||||||||||||||||||||||||    
T  43650587 ttgtattaaagtgattgtacaaatatcatttctcattataaaa 43650629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 555 - 584
Target Start/End: Complemental strand, 4344475 - 4344446
Alignment:
Q  555 aaaatggttgtacaaatatcatttctcatt 584  Q
    ||||||||||||||||||||||||||||||    
T  4344475 aaaatggttgtacaaatatcatttctcatt 4344446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 6666053 - 6666020
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    ||||| ||||||||||||||||||||||||||||    
T  6666053 ttgtaataaaatggttgtacaaatatcatttctc 6666020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 7498029 - 7498062
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    ||||| ||||||||||||||||||||||||||||    
T  7498029 ttgtaataaaatggttgtacaaatatcatttctc 7498062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 12208475 - 12208442
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  12208475 ttgtacaaaaatggttgtacaaatatcatttctc 12208442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 554 - 583
Target Start/End: Original strand, 12784443 - 12784472
Alignment:
Q  554 taaaatggttgtacaaatatcatttctcat 583  Q
    ||||||||||||||||||||||||||||||    
T  12784443 taaaatggttgtacaaatatcatttctcat 12784472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 13881255 - 13881206
Alignment:
Q  421 ttttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||| ||||||||||| ||||||||| |||| ||||||| |||||||||    
T  13881255 ttttgctacaacttttgtgacaactttattgtgctctcttttcattggtc 13881206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 14021380 - 14021331
Alignment:
Q  421 ttttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||| ||||||||||| ||||||||| |||| ||||||| |||||||||    
T  14021380 ttttgctacaacttttgtgacaactttattgtgctctcttttcattggtc 14021331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 555 - 584
Target Start/End: Original strand, 18749408 - 18749437
Alignment:
Q  555 aaaatggttgtacaaatatcatttctcatt 584  Q
    ||||||||||||||||||||||||||||||    
T  18749408 aaaatggttgtacaaatatcatttctcatt 18749437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 22296156 - 22296189
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  22296156 ttgtacaaaaatggttgtacaaatatcatttctc 22296189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 28679304 - 28679239
Alignment:
Q  404 tgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    ||||||||  |||||  ||||||||||||||||| |||||| |||||||  |||||||| ||||||    
T  28679304 tgatatttgaacaactcttttggtacaacttttgggacaaccttgttgtattctcttcttattggt 28679239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 30340026 - 30339993
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  30340026 ttgtacaaaaatggttgtacaaatatcatttctc 30339993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 397 - 470
Target Start/End: Complemental strand, 32755862 - 32755789
Alignment:
Q  397 agagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||| ||||||||||  ||||||||||||  ||||||||||||||| | || || ||||||||| | |||||||    
T  32755862 agagtagtgatatttctacaaccattttgtgacaacttttgagacagccttatttttctctcttttgattggtc 32755789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 555 - 584
Target Start/End: Original strand, 35792673 - 35792702
Alignment:
Q  555 aaaatggttgtacaaatatcatttctcatt 584  Q
    ||||||||||||||||||||||||||||||    
T  35792673 aaaatggttgtacaaatatcatttctcatt 35792702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 38533109 - 38533158
Alignment:
Q  421 ttttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||| ||||| |||||| |||||||||||| || |||||||||    
T  38533109 ttttggtacaatttttgggacaaccttgttgttctctattgtcattggtc 38533158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 41156914 - 41156963
Alignment:
Q  421 ttttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||| ||||||||||| ||||| |||||||| ||||||| |||||||||    
T  41156914 ttttgctacaacttttgggacaattttgttgtgctctcttttcattggtc 41156963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 5e-28; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 3518362 - 3518294
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3518362 agtgatattttgacaaccattttggtacaacctttgagacaactttgttgttctctcttctcattggtc 3518294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 10469839 - 10469907
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  10469839 agtgatattttgacaatcattttggtacaatctttgagacaactttgttgttctctcttctcattggtc 10469907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 31625968 - 31626036
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||    
T  31625968 agtgatattttgacaaccattttagtacaacttttaagacaactttattgttctctcttctcattggtc 31626036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 1108188 - 1108109
Alignment:
Q  395 aaagagcagtgatattttgacaaccattttggtacaacttttgag----acaactttgttgttctctcttctcattggtc 470  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||    |||||||||||||||||||||||||||||||    
T  1108188 aaagagtagtgatattttgacaaccattttggtacaacctttgagacaaacaactttgttgttctctcttctcattggtc 1108109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 402 - 468
Target Start/End: Original strand, 35358827 - 35358893
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattgg 468  Q
    |||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  35358827 agtgatattttagcaaccattttggtacaacctttgagacaactttgttgttctctcttctcattgg 35358893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 8761826 - 8761758
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  8761826 agtgatatgttaacaaccattttggtacaacctttgagacaactttgttgttctctcttttcattggtc 8761758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 12612911 - 12612977
Alignment:
Q  404 tgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||  |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  12612911 tgatatttgaacaaccattttggtacaacttttgggacaaccttgttgttctctcttctcattggtc 12612977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 417 - 470
Target Start/End: Complemental strand, 5005277 - 5005224
Alignment:
Q  417 accattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5005277 accattttggtacaacttttgagacaactttgttgttctctcttatcattggtc 5005224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 397 - 470
Target Start/End: Complemental strand, 29766015 - 29765942
Alignment:
Q  397 agagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||| ||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||| |  |||||||||    
T  29766015 agagtagtgatattttgacaactattttggtacaacctttgagataactttgttgttctctttattcattggtc 29765942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 43152954 - 43153020
Alignment:
Q  404 tgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||  ||||| |||||||||||||| ||  ||||||||||||||||||||||||||||||||    
T  43152954 tgatatttgaacaactattttggtacaactcttaggacaactttgttgttctctcttctcattggtc 43153020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 402 - 467
Target Start/End: Complemental strand, 34698954 - 34698890
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattg 467  Q
    ||||||||||| |||| ||||||||||||||||| || |||||||||||||| |||||||||||||    
T  34698954 agtgatattttaacaatcattttggtacaacttt-gaaacaactttgttgttttctcttctcattg 34698890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 394 - 470
Target Start/End: Original strand, 17574108 - 17574184
Alignment:
Q  394 aaaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||| | ||||||||  ||||| |||||||||||||||||| |||||| |||||||||| |||||||| |||||    
T  17574108 aaaagagtaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgttctttcttctcactggtc 17574184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 396 - 470
Target Start/End: Original strand, 37821027 - 37821101
Alignment:
Q  396 aagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||| ||||||||||  ||||| |||||||||||||||||| |||||| |||||||  |||||||| |||||||    
T  37821027 aagagtagtgatatttgaacaactattttggtacaacttttgggacaaccttgttgtgttctcttcttattggtc 37821101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 38920006 - 38919957
Alignment:
Q  421 ttttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||||||||  |||||| |||||||||||||||||||||||||    
T  38920006 ttttggtacaacttttaggacaaccttgttgttctctcttctcattggtc 38919957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 35616693 - 35616761
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||  ||||| ||||||||| || ||||| |||||| ||||||||||||||||| |||||||    
T  35616693 agtgatatttgaacaactattttggtataaattttgggacaaccttgttgttctctcttcttattggtc 35616761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 404 - 470
Target Start/End: Complemental strand, 8442336 - 8442270
Alignment:
Q  404 tgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||  ||||| ||||||||| || |||||  |||| ||||||||||||||||||||||||||    
T  8442336 tgatatttgaacaactattttggtataatttttggaacaattttgttgttctctcttctcattggtc 8442270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 29765863 - 29765830
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    ||||||||||||||||||||||||||||||||||    
T  29765863 ttgtactaaaatggttgtacaaatatcatttctc 29765830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 421 - 469
Target Start/End: Complemental strand, 12203305 - 12203257
Alignment:
Q  421 ttttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    ||||||||||||||||| |||||  ||||||| ||||||||||||||||    
T  12203305 ttttggtacaacttttgtgacaatcttgttgtcctctcttctcattggt 12203257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 431 - 470
Target Start/End: Complemental strand, 5043075 - 5043036
Alignment:
Q  431 acttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||| |||||| |||||||||||||||||||||||||    
T  5043075 acttttgggacaaccttgttgttctctcttctcattggtc 5043036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 420 - 470
Target Start/End: Complemental strand, 9940215 - 9940165
Alignment:
Q  420 attttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||| ||||| ||||  |||||||||||||||||||||| |||||||||    
T  9940215 attttgatacaatttttaggacaactttgttgttctctcttttcattggtc 9940165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 555 - 585
Target Start/End: Complemental strand, 16143416 - 16143386
Alignment:
Q  555 aaaatggttgtacaaatatcatttctcatta 585  Q
    |||||||||||||||||||||||||||||||    
T  16143416 aaaatggttgtacaaatatcatttctcatta 16143386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 555 - 585
Target Start/End: Complemental strand, 22098281 - 22098251
Alignment:
Q  555 aaaatggttgtacaaatatcatttctcatta 585  Q
    |||||||||||||||||||||||||||||||    
T  22098281 aaaatggttgtacaaatatcatttctcatta 22098251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 555 - 585
Target Start/End: Original strand, 36416107 - 36416137
Alignment:
Q  555 aaaatggttgtacaaatatcatttctcatta 585  Q
    |||||||||||||||||||||||||||||||    
T  36416107 aaaatggttgtacaaatatcatttctcatta 36416137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 548 - 582
Target Start/End: Complemental strand, 38387643 - 38387609
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctca 582  Q
    |||||| ||||||||||||||||||||||||||||    
T  38387643 ttgtacaaaaatggttgtacaaatatcatttctca 38387609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 3031867 - 3031834
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  3031867 ttgtacaaaaatggttgtacaaatatcatttctc 3031834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 12203191 - 12203158
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  12203191 ttgtacaaaaatggttgtacaaatatcatttctc 12203158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 14523002 - 14523035
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  14523002 ttgtacaaaaatggttgtacaaatatcatttctc 14523035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 18729327 - 18729360
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  18729327 ttgtacaaaaatggttgtacaaatatcatttctc 18729360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 25585494 - 25585527
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  25585494 ttgtacaaaaatggttgtacaaatatcatttctc 25585527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 39032642 - 39032675
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  39032642 ttgtacaaaaatggttgtacaaatatcatttctc 39032675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 40201031 - 40201080
Alignment:
Q  421 ttttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||| |||||||||||| |||||| ||||| |||| ||||||||||||||    
T  40201031 tttttgtacaacttttgtgacaaccttgttattctttcttctcattggtc 40201080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 555 - 584
Target Start/End: Complemental strand, 40829440 - 40829411
Alignment:
Q  555 aaaatggttgtacaaatatcatttctcatt 584  Q
    ||||||||||||||||||||||||||||||    
T  40829440 aaaatggttgtacaaatatcatttctcatt 40829411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 555 - 584
Target Start/End: Complemental strand, 42699083 - 42699054
Alignment:
Q  555 aaaatggttgtacaaatatcatttctcatt 584  Q
    ||||||||||||||||||||||||||||||    
T  42699083 aaaatggttgtacaaatatcatttctcatt 42699054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 5e-28; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 394 - 470
Target Start/End: Complemental strand, 2280364 - 2280288
Alignment:
Q  394 aaaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  2280364 aaaagagtagtgatattttgacaaccattttggtacaatctttgagacaactttgttgttctctcttctcattggtc 2280288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 29533940 - 29533872
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29533940 agtgatattttgacaatcattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 29533872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 50025579 - 50025645
Alignment:
Q  404 tgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  50025579 tgatattttcacaaccattttggtacaacctttgagacaactttgttgttctctcttctcattggtc 50025645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 393 - 466
Target Start/End: Complemental strand, 42643425 - 42643352
Alignment:
Q  393 taaaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcatt 466  Q
    ||||||||||||||||||||||||||||||||| || || ||||||||||| ||||||||||||||||||||||    
T  42643425 taaaagagcagtgatattttgacaaccattttgatataatttttgagacaattttgttgttctctcttctcatt 42643352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 14847405 - 14847477
Alignment:
Q  397 agagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||    
T  14847405 agagtagtgatattttgacaaccattttggtacaaccttttagacaactttgttgttctatcttctcattggt 14847477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 16295643 - 16295575
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  16295643 agtgatattttgacaactattttggtacaacttttgagacaactttgttgttctctctttttattggtc 16295575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 402 - 469
Target Start/End: Original strand, 9557824 - 9557891
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9557824 agtgatattttgacaattattttggtacaacttttgagacaattttgttgttctctcttctcattggt 9557891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 38471826 - 38471754
Alignment:
Q  397 agagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    |||| ||||||||||||||||  ||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  38471826 agagtagtgatattttgacaattattttggtacaatctttgagacaactttgttgttctctcttctcattggt 38471754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 404 - 466
Target Start/End: Original strand, 47140569 - 47140631
Alignment:
Q  404 tgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcatt 466  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  47140569 tgatattttgagaaccattttggtacaacttttgagacaactttgttgttctctattttcatt 47140631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 402 - 469
Target Start/End: Original strand, 1261267 - 1261334
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    |||||||||||||||||||| ||| ||||| |||| |||||||||||||||| |||||||||||||||    
T  1261267 agtgatattttgacaaccatgttgatacaattttttagacaactttgttgttttctcttctcattggt 1261334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 36301096 - 36301167
Alignment:
Q  396 aagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    ||||| |||||||||||||||| ||||||||||  || ||||||| ||||||||||||||||||||||||||||    
T  36301096 aagagtagtgatattttgacaatcattttggta--acatttgagataactttgttgttctctcttctcattggt 36301167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 33972060 - 33971995
Alignment:
Q  404 tgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    ||||||||  ||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  33972060 tgatatttgaacaactattttggtacaatttttgagacaaccttgttgttctctcttctcattggt 33971995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 33075052 - 33074984
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||| || | |||||||    
T  33075052 agtgatattttgacaactattttagtacaacctttgagacaactttgttgttctctttttttattggtc 33074984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 397 - 470
Target Start/End: Complemental strand, 10565235 - 10565163
Alignment:
Q  397 agagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||||||||||||| |||||||||||||||| || |||||||||||||| ||||||||| || | |||||||    
T  10565235 agagcagtgatattttaacaaccattttggtac-acctttgagacaactttattgttctctatttttattggtc 10565163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 402 - 467
Target Start/End: Complemental strand, 34208446 - 34208381
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattg 467  Q
    ||||||||||||||||  |||||  ||||| |||||||||||||||||| ||||||||||||||||    
T  34208446 agtgatattttgacaattattttaatacaatttttgagacaactttgtttttctctcttctcattg 34208381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 399 - 467
Target Start/End: Complemental strand, 25559886 - 25559818
Alignment:
Q  399 agcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattg 467  Q
    |||||||||||||| | || ||||||| |||||| |||||||||| ||| |||||||||||||||||||    
T  25559886 agcagtgatattttaagaatcattttgatacaacctttgagacaattttattgttctctcttctcattg 25559818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 9027799 - 9027724
Alignment:
Q  395 aaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||| | ||||||||  ||||| ||||||||||||||||||  ||||| ||||||||||||||||| |||||||    
T  9027799 aaagagtaatgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttattggtc 9027724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 43149237 - 43149303
Alignment:
Q  404 tgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||  ||||| ||||||||||||||||||  ||||| ||||||||||||||||| |||||||    
T  43149237 tgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttattggtc 43149303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 43900957 - 43900884
Alignment:
Q  396 aagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    ||||||| ||||||||||||| ||||||  | |||||||| | |||||||||||| ||||||||||| ||||||    
T  43900957 aagagcaatgatattttgacatccatttaaggacaactttagtgacaactttgtttttctctcttcttattggt 43900884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 470
Target Start/End: Original strand, 43220026 - 43220102
Alignment:
Q  394 aaaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||| ||||||||||  |||||  |||| ||| |||||||| ||||| ||||||||||||| ||||||||||||    
T  43220026 aaaagagtagtgatatttgaacaacttttttagtataacttttgggacaattttgttgttctctattctcattggtc 43220102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 402 - 467
Target Start/End: Complemental strand, 884716 - 884651
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattg 467  Q
    ||||||||||| ||||| ||||||||| || |||||||| || ||||||||| |||||||| ||||    
T  884716 agtgatattttaacaactattttggtataatttttgagagaattttgttgttttctcttcttattg 884651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 2280210 - 2280177
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    ||||||||||||||||||||||||||||||||||    
T  2280210 ttgtactaaaatggttgtacaaatatcatttctc 2280177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 49361748 - 49361797
Alignment:
Q  421 ttttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||| |||||||||||| |||||||||||| |||| ||||||||||||||    
T  49361748 ttttagtacaacttttgtgacaactttgttattctttcttctcattggtc 49361797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 392 - 445
Target Start/End: Complemental strand, 52383188 - 52383135
Alignment:
Q  392 ataaaagagcagtgatattttgacaaccattttggtacaacttttgagacaact 445  Q
    ||||||||| ||||||||||||||||| ||||||||||||  ||||||| ||||    
T  52383188 ataaaagagtagtgatattttgacaactattttggtacaatctttgagataact 52383135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 31763984 - 31763928
Alignment:
Q  404 tgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctctt 460  Q
    ||||||||  ||||| |||||||||||| ||||| ||||| ||||||||||||||||    
T  31763984 tgatatttaaacaactattttggtacaatttttgggacaattttgttgttctctctt 31763928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 414 - 470
Target Start/End: Original strand, 51385344 - 51385400
Alignment:
Q  414 acaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||| ||||| |||||||||||| ||||||  |||||||||||||| |||||||||    
T  51385344 acaactattttagtacaacttttgggacaaccatgttgttctctcttttcattggtc 51385400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 392 - 432
Target Start/End: Complemental strand, 52381292 - 52381252
Alignment:
Q  392 ataaaagagcagtgatattttgacaaccattttggtacaac 432  Q
    ||||||||| ||||||||||||||||||||||| |||||||    
T  52381292 ataaaagagtagtgatattttgacaaccattttagtacaac 52381252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 590
Target Start/End: Original strand, 6178470 - 6178505
Alignment:
Q  555 aaaatggttgtacaaatatcatttctcattataaaa 590  Q
    ||||| ||||||||||||||||||||||||||||||    
T  6178470 aaaatagttgtacaaatatcatttctcattataaaa 6178505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 470
Target Start/End: Complemental strand, 21481918 - 21481875
Alignment:
Q  427 tacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||||||||||||||| |  ||||||||||||||||||||||    
T  21481918 tacaacttttgagacaacctcattgttctctcttctcattggtc 21481875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 396 - 467
Target Start/End: Original strand, 50294011 - 50294081
Alignment:
Q  396 aagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattg 467  Q
    ||||||| ||||||||| |||||||||| |||||||||| |  ||||||||| || ||||||||| ||||||    
T  50294011 aagagcaatgatattttaacaaccattt-ggtacaacttatttgacaactttctttttctctcttttcattg 50294081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 396 - 470
Target Start/End: Original strand, 2935397 - 2935471
Alignment:
Q  396 aagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||| |||| |||||  |||||  |||| |||||||||||| |||||| ||||| |||| ||||||||||||||    
T  2935397 aagagtagtgttatttgaacaactcttttagtacaacttttgtgacaaccttgttattctttcttctcattggtc 2935471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 394 - 440
Target Start/End: Original strand, 3210560 - 3210606
Alignment:
Q  394 aaaagagcagtgatattttgacaaccattttggtacaacttttgaga 440  Q
    ||||||| ||||||||||| || |||||||||||||||| |||||||    
T  3210560 aaaagagtagtgatattttaactaccattttggtacaacctttgaga 3210606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 555 - 585
Target Start/End: Complemental strand, 7949817 - 7949787
Alignment:
Q  555 aaaatggttgtacaaatatcatttctcatta 585  Q
    |||||||||||||||||||||||||||||||    
T  7949817 aaaatggttgtacaaatatcatttctcatta 7949787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 554 - 584
Target Start/End: Original strand, 19418201 - 19418231
Alignment:
Q  554 taaaatggttgtacaaatatcatttctcatt 584  Q
    |||||||||||||||||||||||||||||||    
T  19418201 taaaatggttgtacaaatatcatttctcatt 19418231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 399 - 469
Target Start/End: Complemental strand, 32152075 - 32152005
Alignment:
Q  399 agcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    |||||||||||||  |||||  ||||||||||| ||||  ||||||||||||||  |||||||| ||||||    
T  32152075 agcagtgatatttgaacaacttttttggtacaatttttaggacaactttgttgtgttctcttcttattggt 32152005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 555 - 593
Target Start/End: Original strand, 37894288 - 37894326
Alignment:
Q  555 aaaatggttgtacaaatatcatttctcattataaaaaga 593  Q
    ||||||||||||||||||||||||||| ||| |||||||    
T  37894288 aaaatggttgtacaaatatcatttctctttaaaaaaaga 37894326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 38296700 - 38296734
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctca 582  Q
    |||||||||||||||||||||||||| ||||||||    
T  38296700 ttgtactaaaatggttgtacaaatattatttctca 38296734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 404 - 470
Target Start/End: Complemental strand, 47683967 - 47683901
Alignment:
Q  404 tgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||  ||||||||||||  ||||||||||||||||| || |  ||||||||||| |||||||    
T  47683967 tgatatttgtacaaccattttgtgacaacttttgagacaaccttctctttctctcttcttattggtc 47683901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 404 - 470
Target Start/End: Complemental strand, 48117513 - 48117447
Alignment:
Q  404 tgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||  |||||  ||||| ||||||||||| |||||| ||||||| ||||||| |||||||||    
T  48117513 tgatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtc 48117447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 428 - 470
Target Start/End: Complemental strand, 50879748 - 50879706
Alignment:
Q  428 acaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||||| | |||||||||||||||||||||||| |||||||    
T  50879748 acaactttagtgacaactttgttgttctctcttcttattggtc 50879706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 555 - 584
Target Start/End: Original strand, 462446 - 462475
Alignment:
Q  555 aaaatggttgtacaaatatcatttctcatt 584  Q
    ||||||||||||||||||||||||||||||    
T  462446 aaaatggttgtacaaatatcatttctcatt 462475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 9158947 - 9158996
Alignment:
Q  421 ttttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||| ||||||||||| |||||| ||||||| ||||||| |||||||||    
T  9158947 ttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtc 9158996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 9159074 - 9159107
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  9159074 ttgtacaaaaatggttgtacaaatatcatttctc 9159107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 14839083 - 14839116
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  14839083 ttgtacaaaaatggttgtacaaatatcatttctc 14839116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 554 - 583
Target Start/End: Original strand, 23869011 - 23869040
Alignment:
Q  554 taaaatggttgtacaaatatcatttctcat 583  Q
    ||||||||||||||||||||||||||||||    
T  23869011 taaaatggttgtacaaatatcatttctcat 23869040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 404 - 453
Target Start/End: Complemental strand, 27276911 - 27276862
Alignment:
Q  404 tgatattttgacaaccattttggtacaacttttgagacaactttgttgtt 453  Q
    ||||||||  ||||| |||||||||||| |||||||||||| ||||||||    
T  27276911 tgatatttgaacaactattttggtacaatttttgagacaaccttgttgtt 27276862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 29057692 - 29057659
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  29057692 ttgtacaaaaatggttgtacaaatatcatttctc 29057659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 29846918 - 29846951
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  29846918 ttgtacaaaaatggttgtacaaatatcatttctc 29846951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 555 - 584
Target Start/End: Complemental strand, 41877714 - 41877685
Alignment:
Q  555 aaaatggttgtacaaatatcatttctcatt 584  Q
    ||||||||||||||||||||||||||||||    
T  41877714 aaaatggttgtacaaatatcatttctcatt 41877685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 555 - 584
Target Start/End: Original strand, 51771484 - 51771513
Alignment:
Q  555 aaaatggttgtacaaatatcatttctcatt 584  Q
    ||||||||||||||||||||||||||||||    
T  51771484 aaaatggttgtacaaatatcatttctcatt 51771513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 555 - 584
Target Start/End: Complemental strand, 52100287 - 52100258
Alignment:
Q  555 aaaatggttgtacaaatatcatttctcatt 584  Q
    ||||||||||||||||||||||||||||||    
T  52100287 aaaatggttgtacaaatatcatttctcatt 52100258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 5e-28; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 394 - 470
Target Start/End: Complemental strand, 46903657 - 46903581
Alignment:
Q  394 aaaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  46903657 aaaagagtagtgatattttaacaaccattttggtacaacctttgagacaactttgttgttctctcttctcattggtc 46903581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 393 - 470
Target Start/End: Original strand, 31666089 - 31666166
Alignment:
Q  393 taaaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||||| ||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  31666089 taaaagagtagtaatattttgacaaccattttggtacaatctttgagacaactttgttgttctctcttctcattggtc 31666166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 402 - 466
Target Start/End: Complemental strand, 27787668 - 27787604
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcatt 466  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27787668 agtgatagtttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcatt 27787604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 37741839 - 37741911
Alignment:
Q  397 agagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    |||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  37741839 agagtagtgatattttgacaaccattttgatacaatttttgagacaactttgttgttctctcttctcattggt 37741911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 397 - 466
Target Start/End: Complemental strand, 644880 - 644811
Alignment:
Q  397 agagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcatt 466  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  644880 agagtagtgatattttgacaaccattttggtacaacatttgagacaactttattgttctctcttctcatt 644811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 6396506 - 6396439
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    |||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6396506 agtgatgttttgacaatcattttggtacaacatttgagacaactttgttgttctctcttctcattggt 6396439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 402 - 469
Target Start/End: Original strand, 21446110 - 21446177
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  21446110 agtgatattttgataaccattttggtacaacctttgagacaactttgttgatctctcttctcattggt 21446177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 43757771 - 43757698
Alignment:
Q  396 aagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    ||||| ||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||| ||||||||    
T  43757771 aagagtagtgatattttgacaactattttggtataatttttgagacaactttgttgttctctcttttcattggt 43757698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 2827602 - 2827670
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||| |||||||    
T  2827602 agtgatattttgataaccattttggtacaacctttgagacaattttgttgttctctcttcttattggtc 2827670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 49615167 - 49615235
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||||||||||||||||||||||  |||||||||||||| ||||||||| ||||||||||||    
T  49615167 agtgatattttgacaaccattttggtacaatctttgagacaactttattgttctcttttctcattggtc 49615235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 396 - 470
Target Start/End: Complemental strand, 40053091 - 40053017
Alignment:
Q  396 aagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||| ||||||||||| ||||| ||||||||||||  ||||||||||||||||||||||||||| |||||||||    
T  40053091 aagagtagtgatattttaacaactattttggtacaatctttgagacaactttgttgttctctcttttcattggtc 40053017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 24158835 - 24158762
Alignment:
Q  396 aagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    ||||| |||||||||||||||||||||| || ||||| |||||||||||||||||||||| |||||| ||||||    
T  24158835 aagagtagtgatattttgacaaccatttaggaacaacctttgagacaactttgttgttctgtcttcttattggt 24158762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 28457239 - 28457307
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||| || |||||||||    
T  28457239 agtgatattttaacaaccattttggtacaacctttgagacaactttattgttctctattttcattggtc 28457307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 31244620 - 31244695
Alignment:
Q  395 aaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||||| ||||||||  ||||| ||||||||||||| |||| ||||||  ||||||||||||||||||||||||    
T  31244620 aaagagcaatgatatttgaacaactattttggtacaacatttgggacaaccatgttgttctctcttctcattggtc 31244695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 396 - 470
Target Start/End: Original strand, 8577388 - 8577462
Alignment:
Q  396 aagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||| ||||||||  ||||| ||||||||| |||||||| |||||| |||||||||||| ||||||||||||    
T  8577388 aagagcaatgatatttgaacaactattttggtataacttttgggacaaccttgttgttctctattctcattggtc 8577462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 37947114 - 37947180
Alignment:
Q  404 tgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||  ||||| |||||| ||||||||||| |||||| |||||||||||||||||||||||||    
T  37947114 tgatatttgaacaactattttgttacaacttttgggacaaccttgttgttctctcttctcattggtc 37947180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 420 - 469
Target Start/End: Original strand, 51436342 - 51436390
Alignment:
Q  420 attttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  51436342 attttggtaca-cttttgagacaactttgttgttctctcttctcattggt 51436390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 394 - 470
Target Start/End: Complemental strand, 19920949 - 19920873
Alignment:
Q  394 aaaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||| ||||||||||||| ||||||  | |||||||| | |||||||||||| ||||||||||| |||||||    
T  19920949 aaaagagcaatgatattttgacatccatttaaggacaactttggtgacaactttgtttttctctcttcttattggtc 19920873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 8312329 - 8312263
Alignment:
Q  397 agagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctc 463  Q
    |||| |||||||||||||||||||||||| || ||| | |||||||||||||||||| ||| |||||    
T  8312329 agagtagtgatattttgacaaccattttgatataacctctgagacaactttgttgttttctattctc 8312263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 398 - 469
Target Start/End: Complemental strand, 11121663 - 11121592
Alignment:
Q  398 gagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    ||||| ||||||||  ||||| ||||||||| |||||||| |||||  |||||||| |||||||||||||||    
T  11121663 gagcaatgatatttgaacaactattttggtataacttttgtgacaatcttgttgttgtctcttctcattggt 11121592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 399 - 470
Target Start/End: Complemental strand, 30596896 - 30596825
Alignment:
Q  399 agcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||| ||||||||  ||| | ||||||||||||| |||||||||||||| ||||||| |||| |||||||||    
T  30596896 agcactgatatttgaacagctattttggtacaacctttgagacaactttattgttctttcttttcattggtc 30596825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 406 - 470
Target Start/End: Complemental strand, 44714418 - 44714352
Alignment:
Q  406 atattttgacaaccattttggtacaacttttgagacaactttg--ttgttctctcttctcattggtc 470  Q
    ||||||| |||| |||||||||||||| |||||||||||||||  |||||||||||| | |||||||    
T  44714418 atattttaacaatcattttggtacaacctttgagacaactttgttttgttctctctttttattggtc 44714352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 548 - 584
Target Start/End: Original strand, 12990507 - 12990543
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctcatt 584  Q
    |||||| ||||||||||||||||||||||||||||||    
T  12990507 ttgtacaaaaatggttgtacaaatatcatttctcatt 12990543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 583
Target Start/End: Original strand, 16252786 - 16252821
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctcat 583  Q
    |||||| |||||||||||||||||||||||||||||    
T  16252786 ttgtacaaaaatggttgtacaaatatcatttctcat 16252821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 469
Target Start/End: Original strand, 27895649 - 27895720
Alignment:
Q  398 gagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    ||||| |||||||||||||  |||||  | |||||||| | |||||||||||| ||||||||||| ||||||    
T  27895649 gagcaatgatattttgacattcatttaaggacaactttagtgacaactttgtttttctctcttcttattggt 27895720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 41564765 - 41564840
Alignment:
Q  395 aaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||| ||||||||||  |||||  ||||||||||| ||||| |||||| |||||||  |||||||| |||||||    
T  41564765 aaagagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttgtgttctcttcttattggtc 41564840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 392 - 470
Target Start/End: Original strand, 23399871 - 23399949
Alignment:
Q  392 ataaaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||| |||| ||||||||||  |||||  ||||||||||| ||||| |||||| |||||||  |||||||| |||||||    
T  23399871 ataatagagtagtgatatttaaacaactcttttggtacaatttttgggacaaccttgttgtgttctcttcttattggtc 23399949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 440 - 470
Target Start/End: Complemental strand, 27954369 - 27954339
Alignment:
Q  440 acaactttgttgttctctcttctcattggtc 470  Q
    |||||||||||||||||||||||||||||||    
T  27954369 acaactttgttgttctctcttctcattggtc 27954339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 420 - 470
Target Start/End: Complemental strand, 43105266 - 43105216
Alignment:
Q  420 attttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||||||||| ||||| ||||||||| |||||||||||| | |||||||    
T  43105266 attttggtacaatttttgggacaactttattgttctctctttttattggtc 43105216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 555 - 593
Target Start/End: Original strand, 51718661 - 51718699
Alignment:
Q  555 aaaatggttgtacaaatatcatttctcattataaaaaga 593  Q
    ||||||||||| ||||||||||||||||| |||||||||    
T  51718661 aaaatggttgttcaaatatcatttctcataataaaaaga 51718699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 836031 - 835982
Alignment:
Q  421 ttttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||||||||| |||||  ||||| || ||||||||||||||||    
T  836031 ttttggtacaacttttgggacaatcttgttattttctcttctcattggtc 835982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 1100250 - 1100217
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  1100250 ttgtacaaaaatggttgtacaaatatcatttctc 1100217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 1100377 - 1100328
Alignment:
Q  421 ttttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||| |||||||||||| |||||| ||||| |||| ||||||||||||||    
T  1100377 ttttagtacaacttttgtgacaaccttgttattctttcttctcattggtc 1100328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 21263202 - 21263149
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttct 455  Q
    ||||||||||  ||||| ||||| |||||| |||||||||||| ||||||||||    
T  21263202 agtgatatttgaacaactatttttgtacaatttttgagacaaccttgttgttct 21263149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 22331399 - 22331366
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  22331399 ttgtaccaaaatggttgtacaaatatcatttctc 22331366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 555 - 588
Target Start/End: Original strand, 23400034 - 23400067
Alignment:
Q  555 aaaatggttgtacaaatatcatttctcattataa 588  Q
    ||||||||||||||||||||||||||||| ||||    
T  23400034 aaaatggttgtacaaatatcatttctcataataa 23400067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 589
Target Start/End: Complemental strand, 26760595 - 26760554
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctcattataaa 589  Q
    |||||| ||||||||||||||||||||| |||||||| ||||    
T  26760595 ttgtacaaaaatggttgtacaaatatcaattctcattttaaa 26760554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 30414908 - 30414875
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  30414908 ttgtacaaaaatggttgtacaaatatcatttctc 30414875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 585
Target Start/End: Complemental strand, 30687077 - 30687048
Alignment:
Q  556 aaatggttgtacaaatatcatttctcatta 585  Q
    ||||||||||||||||||||||||||||||    
T  30687077 aaatggttgtacaaatatcatttctcatta 30687048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 554 - 583
Target Start/End: Complemental strand, 40139153 - 40139124
Alignment:
Q  554 taaaatggttgtacaaatatcatttctcat 583  Q
    ||||||||||||||||||||||||||||||    
T  40139153 taaaatggttgtacaaatatcatttctcat 40139124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 41564918 - 41564951
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  41564918 ttgtacaaaaatggttgtacaaatatcatttctc 41564951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 555 - 584
Target Start/End: Original strand, 47059924 - 47059953
Alignment:
Q  555 aaaatggttgtacaaatatcatttctcatt 584  Q
    ||||||||||||||||||||||||||||||    
T  47059924 aaaatggttgtacaaatatcatttctcatt 47059953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 440 - 469
Target Start/End: Complemental strand, 48028667 - 48028638
Alignment:
Q  440 acaactttgttgttctctcttctcattggt 469  Q
    ||||||||||||||||||||||||||||||    
T  48028667 acaactttgttgttctctcttctcattggt 48028638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 555 - 584
Target Start/End: Original strand, 49020449 - 49020478
Alignment:
Q  555 aaaatggttgtacaaatatcatttctcatt 584  Q
    ||||||||||||||||||||||||||||||    
T  49020449 aaaatggttgtacaaatatcatttctcatt 49020478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 49596268 - 49596235
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    ||||| ||||||||||||||||||||||||||||    
T  49596268 ttgtaataaaatggttgtacaaatatcatttctc 49596235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 554 - 583
Target Start/End: Original strand, 49699796 - 49699825
Alignment:
Q  554 taaaatggttgtacaaatatcatttctcat 583  Q
    ||||||||||||||||||||||||||||||    
T  49699796 taaaatggttgtacaaatatcatttctcat 49699825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 549 - 582
Target Start/End: Original strand, 51250314 - 51250347
Alignment:
Q  549 tgtactaaaatggttgtacaaatatcatttctca 582  Q
    |||| |||||||||||||||||||||||||||||    
T  51250314 tgtattaaaatggttgtacaaatatcatttctca 51250347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 5e-25; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 391 - 470
Target Start/End: Original strand, 46309004 - 46309083
Alignment:
Q  391 tataaaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||    
T  46309004 tatataagagtagtgatattttgacaaccattttggtacaacctttgagacaactttgtagttctctcttttcattggtc 46309083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 4949128 - 4949193
Alignment:
Q  404 tgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4949128 tgatattttgataaccattttggtacaacttttgagacaactttgttgttctttcttctcattggt 4949193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 1987605 - 1987673
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  1987605 agtgatattttgacaatcattttggtacaacctttgagacaactttgttgttctctcttttcattggtc 1987673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 9827877 - 9827945
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||||||||||||| |||||||||| ||| |||||||||||||||||||| ||||||||||||||||    
T  9827877 agtgatattttgacaatcattttggtataacctttgagacaactttgttgttatctcttctcattggtc 9827945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 34538109 - 34538041
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||| ||| |||||    
T  34538109 agtgatattttgacaactattttggtacaacctttgagacaactttgttgttctatcttttcaatggtc 34538041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 397 - 470
Target Start/End: Original strand, 30250185 - 30250258
Alignment:
Q  397 agagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||| ||||||||||| | || |||||||||||||| ||||||||||||||||||||||||||| | |||||||    
T  30250185 agagtagtgatattttaaaaatcattttggtacaacctttgagacaactttgttgttctctctttttattggtc 30250258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 26442280 - 26442339
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttc 461  Q
    ||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||| ||||    
T  26442280 agtgatattttaacaacaattttggtacaacctttgagacaactttgttgttctcccttc 26442339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 396 - 470
Target Start/End: Complemental strand, 46799940 - 46799866
Alignment:
Q  396 aagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||| ||||||||  |||| ||||||||||||| ||||| |||||| |||||||||||| ||||||||||||    
T  46799940 aagagcaatgatatttgaacaatcattttggtacaatttttgggacaaccttgttgttctctattctcattggtc 46799866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 393 - 450
Target Start/End: Complemental strand, 46686413 - 46686356
Alignment:
Q  393 taaaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgtt 450  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  46686413 taaatgagtagtgatattttgacaaccattttggtacaacctttgatacaactttgtt 46686356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 398 - 470
Target Start/End: Complemental strand, 43983080 - 43983008
Alignment:
Q  398 gagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||| ||||||||  |||||||||||||||||||||||  |||||  | |||||||||||||||||||||||    
T  43983080 gagcaatgatatttgaacaaccattttggtacaacttttaggacaatctagttgttctctcttctcattggtc 43983008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 395 - 469
Target Start/End: Complemental strand, 29863737 - 29863663
Alignment:
Q  395 aaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    |||||||| ||||||||  ||||  ||||||||||||||||||||||||| |||||| |||| ||||| ||||||    
T  29863737 aaagagcaatgatatttgaacaattattttggtacaacttttgagacaacattgttgctctcccttcttattggt 29863663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 402 - 460
Target Start/End: Original strand, 36946984 - 36947042
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctctt 460  Q
    |||||||||||||||||||||||| || || |||||||| || ||||||||||||||||    
T  36946984 agtgatattttgacaaccattttgatataatttttgagataattttgttgttctctctt 36947042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 397 - 470
Target Start/End: Complemental strand, 37732133 - 37732060
Alignment:
Q  397 agagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||| ||||||||||| |||||||||| |||||||  ||||| |||||||| |||||||||||| | |||||||    
T  37732133 agagtagtgatattttaacaaccatttcggtacaatctttgaaacaactttattgttctctctttttattggtc 37732060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 4878153 - 4878078
Alignment:
Q  395 aaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||||| ||||||||  |||||  ||||| ||||||||||| |||||| ||||||| ||||||| |||||||||    
T  4878153 aaagagcaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtc 4878078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 402 - 460
Target Start/End: Original strand, 6093497 - 6093555
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctctt 460  Q
    ||||||||||| ||||| ||||||||| ||  |||||||||| ||||||||||||||||    
T  6093497 agtgatattttaacaactattttggtataatctttgagacaattttgttgttctctctt 6093555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 403 - 469
Target Start/End: Complemental strand, 31318926 - 31318860
Alignment:
Q  403 gtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    |||||||||||||||  || |||||||||| ||| |||||| ||| || ||||||||||||||||||    
T  31318926 gtgatattttgacaattatattggtacaacctttaagacaattttattcttctctcttctcattggt 31318860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 404 - 470
Target Start/End: Complemental strand, 45678440 - 45678374
Alignment:
Q  404 tgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||  ||||| ||||||||||||||||||  ||||| ||||||||||||||| | |||||||    
T  45678440 tgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctctttttattggtc 45678374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 1987751 - 1987784
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    ||||||||||||||||||||||||||||||||||    
T  1987751 ttgtactaaaatggttgtacaaatatcatttctc 1987784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 9828010 - 9828043
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    ||||||||||||||||||||||||||||||||||    
T  9828010 ttgtactaaaatggttgtacaaatatcatttctc 9828043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 396 - 445
Target Start/End: Complemental strand, 35037767 - 35037718
Alignment:
Q  396 aagagcagtgatattttgacaaccattttggtacaacttttgagacaact 445  Q
    ||||| |||||||||||||||| |||||| ||||||| ||||||||||||    
T  35037767 aagagtagtgatattttgacaatcattttagtacaacctttgagacaact 35037718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 470
Target Start/End: Original strand, 54801410 - 54801447
Alignment:
Q  433 ttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||||||||||||||| |||||||||||||||||||    
T  54801410 ttttgagacaactttgttattctctcttctcattggtc 54801447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 396 - 453
Target Start/End: Complemental strand, 55960885 - 55960828
Alignment:
Q  396 aagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgtt 453  Q
    ||||| ||||||||||| |||||||||||| |||||  ||||||||||| ||||||||    
T  55960885 aagagtagtgatattttaacaaccattttgatacaatctttgagacaacgttgttgtt 55960828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 548 - 584
Target Start/End: Original strand, 24310548 - 24310584
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctcatt 584  Q
    |||||| ||||||||||||||||||||||||||||||    
T  24310548 ttgtacaaaaatggttgtacaaatatcatttctcatt 24310584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 583
Target Start/End: Complemental strand, 7795058 - 7795023
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctcat 583  Q
    |||||| |||||||||||||||||||||||||||||    
T  7795058 ttgtacaaaaatggttgtacaaatatcatttctcat 7795023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 469
Target Start/End: Complemental strand, 21766730 - 21766659
Alignment:
Q  398 gagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    ||||||||||||||  |||||  |||||||| |||||||| |||||| |||||||  |||||||| ||||||    
T  21766730 gagcagtgatatttgaacaactcttttggtataacttttgggacaaccttgttgtgttctcttcttattggt 21766659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 50291468 - 50291393
Alignment:
Q  395 aaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||| |||| |||||  |||||  ||||||||||||||||| |||||| |||||||  |||||||| |||||||    
T  50291468 aaagagtagtgttatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctcttcttattggtc 50291393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 435 - 470
Target Start/End: Original strand, 54803255 - 54803290
Alignment:
Q  435 ttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||||||||||||||||||||||||| |||||||||    
T  54803255 ttgagacaactttgttgttctctcttttcattggtc 54803290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 404 - 470
Target Start/End: Complemental strand, 33777071 - 33777005
Alignment:
Q  404 tgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||  ||||| |||||||||||| ||||| || ||| ||||||||||||||| | |||||||    
T  33777071 tgatatttgaacaactattttggtacaatttttgggataaccttgttgttctctctttttattggtc 33777005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 397 - 467
Target Start/End: Original strand, 46791878 - 46791948
Alignment:
Q  397 agagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattg 467  Q
    |||| ||||||||||  |||||  ||||| |||||||||||||||||| |  ||||||||||| |||||||    
T  46791878 agaggagtgatatttgaacaactcttttgatacaacttttgagacaacctcattgttctctctactcattg 46791948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 1868920 - 1868953
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  1868920 ttgtacaaaaatggttgtacaaatatcatttctc 1868953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 554 - 583
Target Start/End: Complemental strand, 3475896 - 3475867
Alignment:
Q  554 taaaatggttgtacaaatatcatttctcat 583  Q
    ||||||||||||||||||||||||||||||    
T  3475896 taaaatggttgtacaaatatcatttctcat 3475867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 4577590 - 4577557
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  4577590 ttgtacgaaaatggttgtacaaatatcatttctc 4577557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 8487795 - 8487746
Alignment:
Q  421 ttttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||| |||||||||||||||||| ||||||| ||||||| | |||||||    
T  8487795 ttttgctacaacttttgagacaaccttgttgtgctctctttttattggtc 8487746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 397 - 470
Target Start/End: Complemental strand, 18944469 - 18944396
Alignment:
Q  397 agagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||| ||||||||||  |||||  ||||||||||||||||| |||||| || ||||  |||||||| |||||||    
T  18944469 agagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttattgtgttctcttcttattggtc 18944396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 26442428 - 26442461
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  26442428 ttgtaccaaaatggttgtacaaatatcatttctc 26442461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 27384220 - 27384187
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    ||||| ||||||||||||||||||||||||||||    
T  27384220 ttgtaataaaatggttgtacaaatatcatttctc 27384187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 31318786 - 31318753
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  31318786 ttgtaccaaaatggttgtacaaatatcatttctc 31318753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 555 - 584
Target Start/End: Original strand, 33776858 - 33776887
Alignment:
Q  555 aaaatggttgtacaaatatcatttctcatt 584  Q
    ||||||||||||||||||||||||||||||    
T  33776858 aaaatggttgtacaaatatcatttctcatt 33776887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 37775338 - 37775387
Alignment:
Q  421 ttttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||| ||||||||||||||||||| ||||| |||||| || |||||||||    
T  37775338 ttttcgtacaacttttgagacaaccttgttattctctattatcattggtc 37775387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 46355202 - 46355251
Alignment:
Q  421 ttttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||| |||||||||||| |||||||||| | |||||| ||||||||||||    
T  46355202 tttttgtacaacttttgggacaactttggtattctcttttctcattggtc 46355251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 559 - 596
Target Start/End: Original strand, 51389123 - 51389160
Alignment:
Q  559 tggttgtacaaatatcatttctcattataaaaagataa 596  Q
    ||||||||||||||||||||||||||| ||||| ||||    
T  51389123 tggttgtacaaatatcatttctcattaaaaaaatataa 51389160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 397 - 466
Target Start/End: Complemental strand, 51389499 - 51389431
Alignment:
Q  397 agagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcatt 466  Q
    |||||||||||||||  |||||||||| | ||||||||||| ||||||||  || ||||||||| |||||    
T  51389499 agagcagtgatatttgaacaaccattt-gatacaacttttgtgacaacttcttttttctctcttttcatt 51389431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 54165199 - 54165232
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    ||||| ||||||||||||||||||||||||||||    
T  54165199 ttgtagtaaaatggttgtacaaatatcatttctc 54165232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 2e-24; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 396 - 470
Target Start/End: Complemental strand, 34976801 - 34976727
Alignment:
Q  396 aagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||| |||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  34976801 aagagtagtgatattttgtcaaccattttggtacaacctttgagataactttgttgttctctcttctcattggtc 34976727  T

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Target: chr6; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 3335344 - 3335417
Alignment:
Q  396 aagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    ||||||||||||||||||||| |||||||| |||||  ||||||||||||||||||||||||||| ||||||||    
T  3335344 aagagcagtgatattttgacagccattttgatacaatatttgagacaactttgttgttctctcttttcattggt 3335417  T

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Target: chr6; HSP #3
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 394 - 470
Target Start/End: Original strand, 608545 - 608621
Alignment:
Q  394 aaaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||| ||||||||  ||||| |||||||||||||| ||| |||||| |||||||||||||||||||||||||    
T  608545 aaaagagcaatgatatttgaacaactattttggtacaactgttgggacaaccttgttgttctctcttctcattggtc 608621  T

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Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 35050350 - 35050283
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    |||| |||||||||||| ||||||||| ||||||||||| || ||||||||||| ||||| |||||||    
T  35050350 agtggtattttgacaactattttggtaaaacttttgagataattttgttgttctatcttcacattggt 35050283  T

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Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 420 - 466
Target Start/End: Complemental strand, 22422311 - 22422265
Alignment:
Q  420 attttggtacaacttttgagacaactttgttgttctctcttctcatt 466  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||    
T  22422311 attttggtacaacttttggtacaactttgttgttctctcttctcatt 22422265  T

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Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 397 - 470
Target Start/End: Original strand, 7303992 - 7304065
Alignment:
Q  397 agagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    |||| ||||||||||  |||||  ||||| |||||||||||||||||| |  ||||||||||||||||||||||    
T  7303992 agaggagtgatatttgaacaactcttttgatacaacttttgagacaacctcattgttctctcttctcattggtc 7304065  T

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Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 548 - 585
Target Start/End: Original strand, 27790273 - 27790310
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctcatta 585  Q
    |||||| |||||||||||||||||||||||||||||||    
T  27790273 ttgtacaaaaatggttgtacaaatatcatttctcatta 27790310  T

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Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 583
Target Start/End: Complemental strand, 16121196 - 16121161
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctcat 583  Q
    |||||| |||||||||||||||||||||||||||||    
T  16121196 ttgtacaaaaatggttgtacaaatatcatttctcat 16121161  T

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Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 586
Target Start/End: Original strand, 16743311 - 16743342
Alignment:
Q  555 aaaatggttgtacaaatatcatttctcattat 586  Q
    ||||||||||||||||||||||||||||||||    
T  16743311 aaaatggttgtacaaatatcatttctcattat 16743342  T

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Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 554 - 596
Target Start/End: Original strand, 21857611 - 21857653
Alignment:
Q  554 taaaatggttgtacaaatatcatttctcattataaaaagataa 596  Q
    |||||||||||||||||||||||||||||| | ||||| ||||    
T  21857611 taaaatggttgtacaaatatcatttctcataagaaaaatataa 21857653  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 2165327 - 2165360
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  2165327 ttgtacaaaaatggttgtacaaatatcatttctc 2165360  T

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Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 2176960 - 2176993
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  2176960 ttgtacaaaaatggttgtacaaatatcatttctc 2176993  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 6997461 - 6997510
Alignment:
Q  421 ttttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||| ||||||||||| |||||| ||||||| ||||||| |||||||||    
T  6997461 ttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtc 6997510  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 19789114 - 19789147
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    ||||| ||||||||||||||||||||||||||||    
T  19789114 ttgtaataaaatggttgtacaaatatcatttctc 19789147  T

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Target: scaffold0592 (Bit Score: 53; Significance: 7e-21; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 406 - 470
Target Start/End: Complemental strand, 1085 - 1021
Alignment:
Q  406 atattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  1085 atattttgacaactattttggtacaacttttgagataactttgttgttctctcttttcattggtc 1021  T

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Target: scaffold0036 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 54554 - 54622
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||| | |||||||    
T  54554 agtgatattttgacaactattttggtacaatctttgagacaactttgttgttctctctttttattggtc 54622  T

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Target: scaffold0542 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 394 - 467
Target Start/End: Complemental strand, 3028 - 2955
Alignment:
Q  394 aaaagagcagtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattg 467  Q
    ||||||| ||||||||||||||||| ||||||||| ||  ||||||| || ||| ||||||| |||||||||||    
T  3028 aaaagaggagtgatattttgacaactattttggtataatctttgagataatttttttgttctttcttctcattg 2955  T

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Target: scaffold0651 (Bit Score: 35; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 403 - 469
Target Start/End: Original strand, 4744 - 4810
Alignment:
Q  403 gtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggt 469  Q
    |||||||||||||||  || |||||||||| ||| |||||| ||| || ||||||||||||||||||    
T  4744 gtgatattttgacaattatattggtacaacctttaagacaattttattcttctctcttctcattggt 4810  T

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Target: scaffold0651; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Original strand, 4884 - 4917
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  4884 ttgtaccaaaatggttgtacaaatatcatttctc 4917  T

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Target: scaffold0172 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 548 - 585
Target Start/End: Complemental strand, 17008 - 16971
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctcatta 585  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  17008 ttgtagtaaaatggttgtacaaatatcatttctcatta 16971  T

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Target: scaffold0014 (Bit Score: 33; Significance: 0.000000006; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 145226 - 145158
Alignment:
Q  402 agtgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||||  |||||  ||||||||||||||||| |||||| |||||||  |||||||| |||||||    
T  145226 agtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctcttcttattggtc 145158  T

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Target: scaffold0014; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 145094 - 145061
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  145094 ttgtacaaaaatggttgtacaaatatcatttctc 145061  T

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Target: scaffold0148 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 548 - 582
Target Start/End: Original strand, 21483 - 21517
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctca 582  Q
    ||||| |||||||||||||||||||||||||||||    
T  21483 ttgtaataaaatggttgtacaaatatcatttctca 21517  T

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Target: scaffold0058 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 404 - 470
Target Start/End: Complemental strand, 3120 - 3054
Alignment:
Q  404 tgatattttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcattggtc 470  Q
    ||||||||  |||||  ||||| ||||||||||| ||||||||| |||| ||||||| |||||||||    
T  3120 tgatatttgaacaacttttttgctacaacttttgggacaactttattgtgctctcttttcattggtc 3054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 548 - 582
Target Start/End: Complemental strand, 155939 - 155905
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctca 582  Q
    ||||| |||||||||||||||||||||||||||||    
T  155939 ttgtaataaaatggttgtacaaatatcatttctca 155905  T

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Target: scaffold0286 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 17082 - 17049
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    |||||| |||||||||||||||||||||||||||    
T  17082 ttgtacaaaaatggttgtacaaatatcatttctc 17049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 581
Target Start/End: Complemental strand, 60502 - 60469
Alignment:
Q  548 ttgtactaaaatggttgtacaaatatcatttctc 581  Q
    ||||| ||||||||||||||||||||||||||||    
T  60502 ttgtaataaaatggttgtacaaatatcatttctc 60469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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