View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1883-Insertion-5 (Length: 964)

Name: NF1883-Insertion-5
Description: NF1883
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1883-Insertion-5
NF1883-Insertion-5
[»] chr4 (4 HSPs)
chr4 (7-957)||(43559955-43560924)
chr4 (798-957)||(1992531-1992697)
chr4 (329-367)||(21173782-21173820)
chr4 (326-379)||(24359816-24359869)
[»] chr1 (6 HSPs)
chr1 (326-453)||(51044468-51044595)
chr1 (120-252)||(51044095-51044227)
chr1 (635-743)||(51044664-51044772)
chr1 (328-392)||(16138908-16138972)
chr1 (326-412)||(37962865-37962951)
chr1 (328-392)||(16127398-16127462)
[»] chr3 (4 HSPs)
chr3 (326-453)||(34626631-34626758)
chr3 (635-743)||(34626408-34626516)
chr3 (116-252)||(34626858-34626994)
chr3 (328-420)||(44674038-44674130)
[»] chr7 (1 HSPs)
chr7 (332-412)||(45676052-45676132)
[»] chr5 (1 HSPs)
chr5 (316-379)||(2590833-2590896)
[»] chr2 (5 HSPs)
chr2 (326-390)||(27172787-27172851)
chr2 (643-703)||(41830788-41830848)
chr2 (323-390)||(28205955-28206022)
chr2 (318-381)||(42789005-42789068)
chr2 (318-399)||(37881847-37881928)
[»] chr8 (4 HSPs)
chr8 (329-410)||(5960363-5960444)
chr8 (318-379)||(41351226-41351287)
chr8 (329-384)||(5843121-5843176)
chr8 (477-506)||(32297706-32297735)
[»] chr6 (1 HSPs)
chr6 (648-682)||(34358271-34358305)


Alignment Details
Target: chr4 (Bit Score: 837; Significance: 0; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 837; E-Value: 0
Query Start/End: Original strand, 7 - 957
Target Start/End: Complemental strand, 43560924 - 43559955
Alignment:
Q  7 aacactcactcaggtaatatttcacgctatatagagacagtgaccacttcatacttcacactattcttcttcctccaaaaccaacttaacatttctcata 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43560924 aacactcactcaggtaatatttcacgctatatagagacagtgaccacttcatacttcacactattcttcttcctccaaaaccaacttaacatttctcata 43560825  T
Q  107 caaatccaaatgggtcgtcattcatgttgtttaaagcaaaagttgaggaaaggtttatggtcccctgaagaagatgaaaagcttttcaatcatataacta 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43560824 caaatccaaatgggtcgtcattcatgttgtttaaagcaaaagttgaggaaaggtttatggtcccctgaagaagatgaaaagcttttcaatcatataacta 43560725  T
Q  207 gatttggtgttggttgctggagttctgttcctaaacaagctggtaagtaatttgttaaaatcatgttacattcttcaaaactaagagtctaacatggttg 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43560724 gatttggtgttggttgctggagttctgttcctaaacaagctggtaagtaa-ttgttaaaatcatgttacattcttcaaaactaagagtctaacatggttg 43560626  T
Q  307 atgaatttcttcaggacttcaaagatgtggaaagagttgtagattgagatggataaactatttgaggcctgatttaaagagaggaatgttctcacaacaa 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43560625 atgaatttcttcaggacttcaaagatgtggaaagagttgtagattgagatggataaactatttgaggcctgatttaaagagaggaatgttctcacaacaa 43560526  T
Q  407 gaagaggatcttataatcagtcttcatgaagtccttggaaatagg----------------tatatgattcaacatatatcattttgtgcatgtttggaa 490  Q
    |||||||||||||||||||||||||||||||||||||||||||||                |||||||||||||||||||||||||||||||||||||||    
T  43560525 gaagaggatcttataatcagtcttcatgaagtccttggaaataggtaacatcatatacgaatatatgattcaacatatatcattttgtgcatgtttggaa 43560426  T
Q  491 tcacgatgagtttgactaaattatcacagtcctgtaatatagctttaacaaaaattacaaggactccctgtgattttgtcaaattcactgtgaatccaaa 590  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43560425 tcaccatgagtttgactaaattatcatagtcctgtaatatagctttaacaaaaattacgaggactccctgtgattttgtcaaattcactgtgaatccaaa 43560326  T
Q  591 catatttcttccgttacgaaatgaatttcnnnnnnngaacattacaggtgggctcaaatagcagcacaattaccagggagaacagataatgaaattaaaa 690  Q
    ||||||||||| |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43560325 catatttcttctgttacgaaatgaatttctttttttgaacattacaggtgggctcaaatagcagcacaattaccagggagaacagataatgaaattaaaa 43560226  T
Q  691 acttctggaattcgtgtttaaagaagaagcttctaaagcaagggattgatccaacaacacacaagcctcttacagaagcatatcttaaggaagagaacaa 790  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43560225 acttctggaattcgtgtttaaagaagaagcttctaaagcaagggattgatccaacaacacacaagcctcttacagaagcatatcttaaggaagagaacaa 43560126  T
Q  791 aatcacagaaacaacagtaccatctatgcaaataccatcaattacatcacatggttcagcatttctaataaccgattcgagttactatgatgataatggc 890  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43560125 aatcacagaaacaacagtaccatctatgcaaataccatcaattacatcacatggttcagcatttctaataactgattcgagttactatgatgataatggc 43560026  T
Q  891 ttaacagaagcttc-agag-aattttcaccagc-agc-agcattggaccctttgttctgctatgatttcca 957  Q
    |||||||||||||| |||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  43560025 ttaacagaagcttcaagagaaattttcaccagcaagcaagcattggaccctttgttctgctatgatttcca 43559955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 798 - 957
Target Start/End: Complemental strand, 1992697 - 1992531
Alignment:
Q  798 gaaacaacagtaccatctatgcaaataccatcaattacatcacatggttcagcatttctaataaccgattcgagttactatgatgataatggcttaacag 897  Q
    |||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1992697 gaaacaacagcaccacctatgcaaataccatcagttacatcacatggttcagcatttctaataaccgattcgagttactatgatgataatggtttaacag 1992598  T
Q  898 aagcttc-agag-aattttcacc----agcagc-agcattggaccctttgttctgctatgatttcca 957  Q
    ||||||| |||| ||||||||||    | || | |||||| ||||||||||||||||||||||||||    
T  1992597 aagcttcaagagaaattttcaccaataaacaacaagcattagaccctttgttctgctatgatttcca 1992531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 329 - 367
Target Start/End: Original strand, 21173782 - 21173820
Alignment:
Q  329 agatgtggaaagagttgtagattgagatggataaactat 367  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  21173782 agatgtggaaaaagttgtagattgagatggctaaactat 21173820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 326 - 379
Target Start/End: Complemental strand, 24359869 - 24359816
Alignment:
Q  326 caaagatgtggaaagagttgtagattgagatggataaactatttgaggcctgat 379  Q
    |||||||||||||| |||||||| || |||||||| || || ||||||||||||    
T  24359869 caaagatgtggaaaaagttgtaggttaagatggatcaattacttgaggcctgat 24359816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 8e-42; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 326 - 453
Target Start/End: Original strand, 51044468 - 51044595
Alignment:
Q  326 caaagatgtggaaagagttgtagattgagatggataaactatttgaggcctgatttaaagagaggaatgttctcacaacaagaagaggatcttataatca 425  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| || |||||||| ||||    
T  51044468 caaaggtgtggaaagagctgtagattgagatggataaactatttgaggcctgatttgaagagaggaatgttctcaaaacaagaggaagatcttatcatca 51044567  T
Q  426 gtcttcatgaagtccttggaaataggta 453  Q
     |||||||||||  ||||||||||||||    
T  51044568 atcttcatgaagcacttggaaataggta 51044595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 120 - 252
Target Start/End: Original strand, 51044095 - 51044227
Alignment:
Q  120 gtcgtcattcatgttgtttaaagcaaaagttgaggaaaggtttatggtcccctgaagaagatgaaaagcttttcaatcatataactagatttggtgttgg 219  Q
    ||||||||||||||| ||||||||||||  | || ||||||||||||||||||||||||||||| |||||||||||| | ||||| |  |||||||||||    
T  51044095 gtcgtcattcatgttctttaaagcaaaaactaagaaaaggtttatggtcccctgaagaagatgataagcttttcaattacataaccatgtttggtgttgg 51044194  T
Q  220 ttgctggagttctgttcctaaacaagctggtaa 252  Q
     || |||||||| |||||||||| |||||||||    
T  51044195 atgttggagttcagttcctaaactagctggtaa 51044227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 635 - 743
Target Start/End: Original strand, 51044664 - 51044772
Alignment:
Q  635 caggtgggctcaaatagcagcacaattaccagggagaacagataatgaaattaaaaacttctggaattcgtgtttaaagaagaagcttctaaagcaaggg 734  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||| || |||||||| ||||||||  |||| |||||||| ||  | || ||||||    
T  51044664 caggtgggctcaaattgcatcacaattaccagggagaacagataatgagataaaaaacttttggaattcaagtttgaagaagaaactaatgaaacaaggg 51044763  T
Q  735 attgatcca 743  Q
    |||||||||    
T  51044764 attgatcca 51044772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 328 - 392
Target Start/End: Complemental strand, 16138972 - 16138908
Alignment:
Q  328 aagatgtggaaagagttgtagattgagatggataaactatttgaggcctgatttaaagagaggaa 392  Q
    ||||||||||||||||||||||||||||||||| |||||||| |  |||||| | ||||||||||    
T  16138972 aagatgtggaaagagttgtagattgagatggattaactatttaaaacctgatattaagagaggaa 16138908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 326 - 412
Target Start/End: Original strand, 37962865 - 37962951
Alignment:
Q  326 caaagatgtggaaagagttgtagattgagatggataaactatttgaggcctgatttaaagagaggaatgttctcacaacaagaagag 412  Q
    ||||| ||||| |||||||| || || ||||||||||| || |||||||||||||| || ||||||   ||||||||||||||||||    
T  37962865 caaaggtgtgggaagagttgcaggttaagatggataaattacttgaggcctgatttgaaaagaggagcattctcacaacaagaagag 37962951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 328 - 392
Target Start/End: Complemental strand, 16127462 - 16127398
Alignment:
Q  328 aagatgtggaaagagttgtagattgagatggataaactatttgaggcctgatttaaagagaggaa 392  Q
    ||||||||||||||||||||||||||||||||| || ||||| ||  ||||| | ||||||||||    
T  16127462 aagatgtggaaagagttgtagattgagatggattaattatttaagaactgatattaagagaggaa 16127398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 2e-39; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 326 - 453
Target Start/End: Complemental strand, 34626758 - 34626631
Alignment:
Q  326 caaagatgtggaaagagttgtagattgagatggataaactatttgaggcctgatttaaagagaggaatgttctcacaacaagaagaggatcttataatca 425  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||| |||||||| |||||||||||||||||| ||||||| || |||||||| ||||    
T  34626758 caaagatgtggaaagagttgtagattgagatggatcaactatctgagacctgatttgaagagaggaatgttctcaaaacaagaggaagatcttattatca 34626659  T
Q  426 gtcttcatgaagtccttggaaataggta 453  Q
     |||||||||||  ||||||||||||||    
T  34626658 atcttcatgaagcacttggaaataggta 34626631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 635 - 743
Target Start/End: Complemental strand, 34626516 - 34626408
Alignment:
Q  635 caggtgggctcaaatagcagcacaattaccagggagaacagataatgaaattaaaaacttctggaattcgtgtttaaagaagaagcttctaaagcaaggg 734  Q
    ||||||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||  |||| |||||||| ||  | || ||||||    
T  34626516 caggtgggctcaaattgcagcacaattaccaggtagaacggataatgagattaaaaacttttggaattcaagtttgaagaagaaactaatgaaacaaggg 34626417  T
Q  735 attgatcca 743  Q
    |||||||||    
T  34626416 attgatcca 34626408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 116 - 252
Target Start/End: Complemental strand, 34626994 - 34626858
Alignment:
Q  116 atgggtcgtcattcatgttgtttaaagcaaaagttgaggaaaggtttatggtcccctgaagaagatgaaaagcttttcaatcatataactagatttggtg 215  Q
    |||||||| ||||  |||| ||||||||||||  | || ||||||||||||||||||||||||||||| |||||||||||| | ||||| |  |||||||    
T  34626994 atgggtcgccatttttgttctttaaagcaaaaactaagaaaaggtttatggtcccctgaagaagatgagaagcttttcaattacataaccatgtttggtg 34626895  T
Q  216 ttggttgctggagttctgttcctaaacaagctggtaa 252  Q
    | || || |||||||| |||||||||  |||||||||    
T  34626894 tcggatgttggagttcagttcctaaattagctggtaa 34626858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 328 - 420
Target Start/End: Original strand, 44674038 - 44674130
Alignment:
Q  328 aagatgtggaaagagttgtagattgagatggataaactatttgaggcctgatttaaagagaggaatgttctcacaacaagaagaggatcttat 420  Q
    ||||||||| |||||||| ||||||||||||||||| ||  | || |||||| | ||||||||||  ||| |  |||||||||| ||||||||    
T  44674038 aagatgtggcaagagttgcagattgagatggataaattacctaagacctgatctcaagagaggaaacttcactgaacaagaagatgatcttat 44674130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 332 - 412
Target Start/End: Complemental strand, 45676132 - 45676052
Alignment:
Q  332 tgtggaaagagttgtagattgagatggataaactatttgaggcctgatttaaagagaggaatgttctcacaacaagaagag 412  Q
    ||||| |||||||||||||||||||||||||| ||| | ||||||||||| |||||||||   |||||| | |||||||||    
T  45676132 tgtgggaagagttgtagattgagatggataaattatctaaggcctgatttgaagagaggagcattctcagagcaagaagag 45676052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 316 - 379
Target Start/End: Original strand, 2590833 - 2590896
Alignment:
Q  316 ttcaggacttcaaagatgtggaaagagttgtagattgagatggataaactatttgaggcctgat 379  Q
    |||||| |||||||| ||||| ||||||||||| |||||||||||||| ||||| |||||||||    
T  2590833 ttcagggcttcaaaggtgtggtaagagttgtaggttgagatggataaattatttaaggcctgat 2590896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000002; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 326 - 390
Target Start/End: Complemental strand, 27172851 - 27172787
Alignment:
Q  326 caaagatgtggaaagagttgtagattgagatggataaactatttgaggcctgatttaaagagagg 390  Q
    |||||||||||||||||||| ||||| ||||||| |||||||||||| || ||| |||| |||||    
T  27172851 caaagatgtggaaagagttgcagattaagatggacaaactatttgagaccagatctaaaaagagg 27172787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 643 - 703
Target Start/End: Complemental strand, 41830848 - 41830788
Alignment:
Q  643 ctcaaatagcagcacaattaccagggagaacagataatgaaattaaaaacttctggaattc 703  Q
    ||||||||||||||| |||||| || ||||| || |||||||| |||||||| ||||||||    
T  41830848 ctcaaatagcagcacgattaccgggaagaaccgacaatgaaataaaaaacttttggaattc 41830788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 323 - 390
Target Start/End: Original strand, 28205955 - 28206022
Alignment:
Q  323 cttcaaagatgtggaaagagttgtagattgagatggataaactatttgaggcctgatttaaagagagg 390  Q
    |||||| ||||||| || |||||| | ||||||||||| || ||| | ||||||||||||||||||||    
T  28205955 cttcaacgatgtgggaaaagttgtcgtttgagatggatcaattatcttaggcctgatttaaagagagg 28206022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 318 - 381
Target Start/End: Complemental strand, 42789068 - 42789005
Alignment:
Q  318 caggacttcaaagatgtggaaagagttgtagattgagatggataaactatttgaggcctgattt 381  Q
    ||||||| || ||||||||||| ||||| || |||||||||||||| ||||| || ||||||||    
T  42789068 caggactgcagagatgtggaaaaagttgcaggttgagatggataaattatttaagacctgattt 42789005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 318 - 399
Target Start/End: Complemental strand, 37881928 - 37881847
Alignment:
Q  318 caggacttcaaagatgtggaaagagttgtagattgagatggataaactatttgaggcctgatttaaagagaggaatgttctc 399  Q
    |||| |||||||| ||||| ||||||||| |  |  |||||| |||||||||||| |||||| | |||||||||| ||||||    
T  37881928 caggtcttcaaaggtgtggtaagagttgtcgtcttcgatggacaaactatttgagacctgatatcaagagaggaaggttctc 37881847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.000000001; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 410
Target Start/End: Complemental strand, 5960444 - 5960363
Alignment:
Q  329 agatgtggaaagagttgtagattgagatggataaactatttgaggcctgatttaaagagaggaatgttctcacaacaagaag 410  Q
    ||||||||||||||||||||||| ||||||||||| ||| | || |||||||| ||  | ||||  ||||| ||||||||||    
T  5960444 agatgtggaaagagttgtagattaagatggataaattatctaagacctgatttgaaacgtggaagtttctctcaacaagaag 5960363  T

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Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 41351287 - 41351226
Alignment:
Q  318 caggacttcaaagatgtggaaagagttgtagattgagatggataaactatttgaggcctgat 379  Q
    |||| |||||||| ||||| ||||||||| |||| ||||||||||| |||||||| ||||||    
T  41351287 cagggcttcaaaggtgtggtaagagttgtcgattaagatggataaattatttgagacctgat 41351226  T

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Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 329 - 384
Target Start/End: Complemental strand, 5843176 - 5843121
Alignment:
Q  329 agatgtggaaagagttgtagattgagatggataaactatttgaggcctgatttaaa 384  Q
    ||||||||||| ||||||||||| ||||||||||| ||| | || |||||||||||    
T  5843176 agatgtggaaaaagttgtagattaagatggataaattatctaagacctgatttaaa 5843121  T

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Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 506
Target Start/End: Original strand, 32297706 - 32297735
Alignment:
Q  477 gtgcatgtttggaatcacgatgagtttgac 506  Q
    ||||||||||||||||||||||||||||||    
T  32297706 gtgcatgtttggaatcacgatgagtttgac 32297735  T

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Target: chr6 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 648 - 682
Target Start/End: Original strand, 34358271 - 34358305
Alignment:
Q  648 atagcagcacaattaccagggagaacagataatga 682  Q
    |||||||||||||||||||| ||||||||||||||    
T  34358271 atagcagcacaattaccaggaagaacagataatga 34358305  T

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