View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1883-Insertion-6 (Length: 937)

Name: NF1883-Insertion-6
Description: NF1883
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1883-Insertion-6
NF1883-Insertion-6
[»] chr2 (9 HSPs)
chr2 (435-937)||(7381681-7382182)
chr2 (115-408)||(7381388-7381681)
chr2 (440-542)||(21603953-21604055)
chr2 (441-542)||(34392156-34392257)
chr2 (441-541)||(37357997-37358097)
chr2 (460-542)||(23863878-23863958)
chr2 (448-528)||(4775636-4775716)
chr2 (466-542)||(4779605-4779681)
chr2 (489-540)||(41095863-41095914)
[»] chr4 (15 HSPs)
chr4 (443-542)||(22343334-22343433)
chr4 (448-542)||(33249449-33249543)
chr4 (448-607)||(12473706-12473864)
chr4 (448-607)||(12528115-12528273)
chr4 (441-542)||(21260789-21260890)
chr4 (441-542)||(51811909-51812010)
chr4 (441-523)||(55590477-55590559)
chr4 (448-542)||(35869646-35869740)
chr4 (448-542)||(52012780-52012874)
chr4 (448-532)||(34829168-34829252)
chr4 (448-540)||(52910126-52910218)
chr4 (448-542)||(9799438-9799532)
chr4 (448-542)||(49999663-49999757)
chr4 (466-539)||(46719950-46720023)
chr4 (448-542)||(47943160-47943255)
[»] scaffold0032 (1 HSPs)
scaffold0032 (441-542)||(34189-34290)
[»] chr3 (15 HSPs)
chr3 (439-542)||(44380247-44380350)
chr3 (448-542)||(50934502-50934596)
chr3 (448-542)||(47186177-47186271)
chr3 (448-542)||(47426352-47426446)
chr3 (448-542)||(31187145-31187239)
chr3 (450-539)||(33509684-33509773)
chr3 (448-542)||(42664675-42664769)
chr3 (448-542)||(34029366-34029460)
chr3 (441-542)||(17466268-17466369)
chr3 (448-542)||(39498744-39498838)
chr3 (441-514)||(32319468-32319541)
chr3 (459-542)||(37742738-37742821)
chr3 (441-542)||(35094541-35094644)
chr3 (441-512)||(10179868-10179939)
chr3 (448-499)||(21963073-21963124)
[»] chr5 (14 HSPs)
chr5 (441-542)||(39570118-39570219)
chr5 (451-628)||(33858528-33858704)
chr5 (448-542)||(29989964-29990058)
chr5 (443-542)||(19357336-19357435)
chr5 (448-542)||(13015383-13015477)
chr5 (448-542)||(38010689-38010783)
chr5 (441-542)||(11607609-11607710)
chr5 (448-541)||(13086755-13086848)
chr5 (448-542)||(1826261-1826355)
chr5 (448-542)||(13421085-13421179)
chr5 (448-542)||(13478120-13478214)
chr5 (440-542)||(9827782-9827884)
chr5 (462-542)||(33271630-33271710)
chr5 (494-542)||(37881189-37881237)
[»] chr7 (7 HSPs)
chr7 (441-542)||(35341531-35341632)
chr7 (448-541)||(48250156-48250249)
chr7 (450-539)||(31306951-31307041)
chr7 (490-607)||(32694581-32694697)
chr7 (448-510)||(40856394-40856456)
chr7 (448-542)||(40893116-40893211)
chr7 (442-539)||(48072385-48072480)
[»] chr1 (13 HSPs)
chr1 (439-542)||(32676129-32676232)
chr1 (448-542)||(8809715-8809809)
chr1 (448-542)||(2569039-2569133)
chr1 (441-539)||(25161304-25161402)
chr1 (448-542)||(29119399-29119493)
chr1 (448-542)||(6223053-6223147)
chr1 (450-527)||(7214501-7214578)
chr1 (441-542)||(8462124-8462224)
chr1 (448-505)||(46435565-46435622)
chr1 (475-538)||(3688917-3688980)
chr1 (551-607)||(46435476-46435532)
chr1 (448-542)||(35998254-35998348)
chr1 (448-505)||(16679811-16679867)
[»] chr6 (6 HSPs)
chr6 (448-542)||(34245569-34245663)
chr6 (448-542)||(5403951-5404045)
chr6 (448-539)||(11113558-11113649)
chr6 (439-542)||(32644912-32645014)
chr6 (448-542)||(1211919-1212013)
chr6 (448-500)||(11753169-11753221)
[»] chr8 (8 HSPs)
chr8 (453-542)||(18168392-18168481)
chr8 (453-542)||(18631949-18632038)
chr8 (441-542)||(41179638-41179739)
chr8 (448-542)||(1514805-1514899)
chr8 (448-607)||(24337841-24337999)
chr8 (454-542)||(4708382-4708470)
chr8 (442-542)||(11254103-11254202)
chr8 (448-542)||(32825910-32826004)
[»] scaffold0229 (1 HSPs)
scaffold0229 (448-542)||(13081-13175)
[»] scaffold0519 (1 HSPs)
scaffold0519 (442-542)||(11191-11290)
[»] scaffold0263 (2 HSPs)
scaffold0263 (476-542)||(23174-23240)
scaffold0263 (448-505)||(23095-23152)
[»] scaffold0041 (1 HSPs)
scaffold0041 (448-542)||(73073-73168)


Alignment Details
Target: chr2 (Bit Score: 399; Significance: 0; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 435 - 937
Target Start/End: Original strand, 7381681 - 7382182
Alignment:
Q  435 ttttatggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttat 534  Q
    ||||||||||||  ||||||||||||||||||| |||||||||||| ||||| |||||||||||||| ||  ||||||||||||||||||||||||||||    
T  7381681 ttttatggattccgcttgtgtaccattaaggtaccaatggtatatactattggccaattagagtgtgccatctaccaatgttactttataaattctttat 7381780  T
Q  535 ttgatatannnnnnnnaaagggtgtgtcatataacgcattttaattgggcaatggtataaaccattatagtacgcaggttctatctgtattttactagat 634  Q
    ||||||||        ||||| |||||||| | || ||||||||||||||||| ||||| |||||||||||||||| |||||||| ||||||||||||||    
T  7381781 ttgatatatttttt--aaaggatgtgtcatgtgacacattttaattgggcaatagtatataccattatagtacgcaagttctatccgtattttactagat 7381878  T
Q  635 tagtggggtccatgtatatatttaataatgtgccaacaagaatggttggcttaaggaaactttagttttgaggatgggtggatattgttttgtttgttgt 734  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7381879 tagtggggtccatgtatatatttattaatgtgccaacaagaatggttggcttaaggaaactttagttttgaggatgggtggatattgttttgtttgttgt 7381978  T
Q  735 ttggatctatatggaaggattattactgtttaaatgtacttttgtggagatattaaagaaatttcttttattaacttattctttggttataatcactttg 834  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7381979 ttggatctatatggaaggattattactgtttaaatgtacttttgtggagatattaaagaaatttcttttattaacttattctttggttataatcactttg 7382078  T
Q  835 ccaatcattttgcatgcatttgattttgattccaattgttttatcctgtactcataacagttttgtttt-gatccttgtctgggaggaaacttaatccat 933  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7382079 ccaatcattttgcatgcatttgattttgattccaattgttttatcctgtactcataacagttttgttttggatccttgtctgggaggaaacttaatccat 7382178  T
Q  934 gtta 937  Q
    ||||    
T  7382179 gtta 7382182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 115 - 408
Target Start/End: Original strand, 7381388 - 7381681
Alignment:
Q  115 accaaatattatggtgcaaataaagttcggtatttctcgttggggattgaggatgaagagagagaagatgttgaaaagttgagtgatgatgtggagtctc 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7381388 accaaatattatggtgcaaataaagttcggtatttctcgttggggattgaggatgaagagagagaagatgttgaaaagttaagtgatgatgtggagtctc 7381487  T
Q  215 aaaagagaagcttagttggcaaacccaaaagccttattcatgttgggcaaaaaactctttcacctgttgacatagaaaggtaggaagggttatgacaaat 314  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7381488 aaaagagaaacttagttggcaaacccaaaagctttattcatgttgggcaaaaaactctttcatctgttgacatagaaaggtaggaagggttatgacaaat 7381587  T
Q  315 taagaaagtacgtggaaattatacttagggggtgcttgatattcaatttgtgattacttttatttttatgaagttaatttgtgattacttattt 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7381588 taagaaagtacgtggaaattatacttagggggtgcttgatattcaatttgtgattacttttatttttatgaagataatttgtgattacttattt 7381681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 440 - 542
Target Start/End: Original strand, 21603953 - 21604055
Alignment:
Q  440 tggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgat 539  Q
    ||||||| |||||||||||||||||||| ||||||||||||  |||||||||||| ||||| |||| |||||||||||||||||||||  ||||||||||    
T  21603953 tggattccacttgtgtaccattaaggtaccaatggtatataccattgaccaattatagtgtatcacctaccaatgttactttataaatgttttatttgat 21604052  T
Q  540 ata 542  Q
    |||    
T  21604053 ata 21604055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 441 - 542
Target Start/End: Complemental strand, 34392257 - 34392156
Alignment:
Q  441 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgata 540  Q
    |||||| |||||||||||||| ||||| ||||||||||||  |||| |||||||||||||| ||| ||||||| ||||||||||||| ||||||||||||    
T  34392257 ggattccacttgtgtaccattgaggtaccaatggtatataccattggccaattagagtgtgccacctaccaatcttactttataaatgctttatttgata 34392158  T
Q  541 ta 542  Q
    ||    
T  34392157 ta 34392156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 441 - 541
Target Start/End: Complemental strand, 37358097 - 37357997
Alignment:
Q  441 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgata 540  Q
    |||||| ||||||||| |||||||||| ||||| ||||||  |||||| |||||||||||||||| || |||||||||||||||||| |||||||| |||    
T  37358097 ggattccacttgtgtatcattaaggtaccaatgatatataccattgactaattagagtgtgtcacctatcaatgttactttataaatgctttatttaata 37357998  T
Q  541 t 541  Q
    |    
T  37357997 t 37357997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 460 - 542
Target Start/End: Complemental strand, 23863958 - 23863878
Alignment:
Q  460 ttaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||||| |||||||||||  |||||  ||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||    
T  23863958 ttaaggtaccaatggtatat--tattggtcaattagagtgtgccacctaccaatgttactttataaatgctttatttgatata 23863878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 448 - 528
Target Start/End: Original strand, 4775636 - 4775716
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaatt 528  Q
    |||| |||||||||||| || ||||| |||||||||||| ||||||||| ||| |||  ||||||| ||||||||| ||||    
T  4775636 acttatgtaccattaagctaccaatgatatatattattggccaattagaatgtctcatctaccaatcttactttattaatt 4775716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 466 - 542
Target Start/End: Original strand, 4779605 - 4779681
Alignment:
Q  466 tatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    ||||||| |||||||  ||||| || ||| |||||| | | || |||||||||||||||||| ||||||||||||||    
T  4779605 tatcaatagtatataccattgatcacttatagtgtgccgcctaacaatgttactttataaatactttatttgatata 4779681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 540
Target Start/End: Complemental strand, 41095914 - 41095863
Alignment:
Q  489 caattagagtgtgtcacttaccaatgttactttataaattctttatttgata 540  Q
    |||||||||||   ||| ||||||||||||||||||||| ||||||||||||    
T  41095914 caattagagtgcaccacctaccaatgttactttataaatgctttatttgata 41095863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 1e-34; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 443 - 542
Target Start/End: Original strand, 22343334 - 22343433
Alignment:
Q  443 attcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  || |||||||||||||||||| ||||||||||||||    
T  22343334 attccacttgtgtaccattaaggtatcaatggtatatatcattgaccaattagagtgtgtcatctatcaatgttactttataaatgctttatttgatata 22343433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 448 - 542
Target Start/End: Complemental strand, 33249543 - 33249449
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    ||||||||||||||||||||  |||||||||||  |||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  33249543 acttgtgtaccattaaggtacaaatggtatatacaattggccaattagagtgtgtcacctaccaatgttactttataaatgctttatttgatata 33249449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 448 - 607
Target Start/End: Original strand, 12473706 - 12473864
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatatannnnn 547  Q
    |||||| ||||||||||||| ||||||||||||  |||| |||||||||||||| ||| |||||||||||||||||| || ||||||||||||||         
T  12473706 acttgtataccattaaggtaccaatggtatataccattggccaattagagtgtgccacctaccaatgttactttatagatgctttatttgatata-tttt 12473804  T
Q  548 nnnaaagggtgtgtcatataacgcattttaattgggcaatggtataaaccattatagtac 607  Q
       |||||||||| || || || |||| |||||| ||||||||||| |||||||| ||||    
T  12473805 tttaaagggtgtggcacatgacacattctaattgagcaatggtatataccattatggtac 12473864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 448 - 607
Target Start/End: Original strand, 12528115 - 12528273
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatatannnnn 547  Q
    |||||| ||||||||||||| ||||||||||||  |||| |||||||||||||| ||| |||||||||||||||||| || ||||||||||||||         
T  12528115 acttgtataccattaaggtaccaatggtatataccattggccaattagagtgtgccacctaccaatgttactttatagatgctttatttgatata-tttt 12528213  T
Q  548 nnnaaagggtgtgtcatataacgcattttaattgggcaatggtataaaccattatagtac 607  Q
       |||||||||| || || || |||| |||||| ||||||||||| |||||||| ||||    
T  12528214 tttaaagggtgtggcacatgacacattctaattgagcaatggtatataccattatggtac 12528273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 441 - 542
Target Start/End: Original strand, 21260789 - 21260890
Alignment:
Q  441 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgata 540  Q
    |||||| |||| | ||||||||||||| ||||| ||||||| |||| |||||||||||||||||| |||||||||||||||||||||  |||||||||||    
T  21260789 ggattccacttatataccattaaggtaccaatgatatatatcattggccaattagagtgtgtcacctaccaatgttactttataaatgttttatttgata 21260888  T
Q  541 ta 542  Q
    ||    
T  21260889 ta 21260890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 441 - 542
Target Start/End: Original strand, 51811909 - 51812010
Alignment:
Q  441 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgata 540  Q
    |||||| ||| |||||||||||||||||||| | |||||||||||| ||||||||||| || ||| |||||||||||||||||||||| ||| |||||||    
T  51811909 ggattccactcgtgtaccattaaggtatcaaagatatatattattggccaattagagtatgccacctaccaatgttactttataaattttttttttgata 51812008  T
Q  541 ta 542  Q
    ||    
T  51812009 ta 51812010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 441 - 523
Target Start/End: Original strand, 55590477 - 55590559
Alignment:
Q  441 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttat 523  Q
    |||||| |||||||||||||||||||| ||||||||||||| ||||| |||||| |||||||||| |||||||||||||||||    
T  55590477 ggattccacttgtgtaccattaaggtaccaatggtatatatcattgatcaattatagtgtgtcacctaccaatgttactttat 55590559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 448 - 542
Target Start/End: Complemental strand, 35869740 - 35869646
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||||||||||||||||| ||||||||||||  |||||||||||| | |||| ||| ||||||||||||| |||||||  |||||||||||||    
T  35869740 acttgtgtaccattaaggtaccaatggtatataccattgaccaattataatgtgccacctaccaatgttactatataaatgttttatttgatata 35869646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 448 - 542
Target Start/End: Original strand, 52012780 - 52012874
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||||||||||||||||| ||||| ||||||  |||||||||| | |||||| ||| |||||||||||||||||||||  |||||||||||||    
T  52012780 acttgtgtaccattaaggtaccaatgttatataacattgaccaataaaagtgtgccacataccaatgttactttataaatgttttatttgatata 52012874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 448 - 532
Target Start/End: Complemental strand, 34829252 - 34829168
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattcttt 532  Q
    |||| ||||| ||||||||| ||||| ||||||| | || ||||||| |||||||||| ||||||||||||||||||||| ||||    
T  34829252 acttatgtactattaaggtaccaatgatatatatcaatggccaattaaagtgtgtcacctaccaatgttactttataaatgcttt 34829168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 448 - 540
Target Start/End: Complemental strand, 52910218 - 52910126
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgata 540  Q
    ||||||||||||| | |||| ||||| ||||||  |||| ||||||| |||||| ||| ||||||| ||||||||||||| ||||||||||||    
T  52910218 acttgtgtaccataatggtaccaatgttatataccattggccaattaaagtgtgccacctaccaatattactttataaatgctttatttgata 52910126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 448 - 542
Target Start/End: Complemental strand, 9799532 - 9799438
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||| ||||||||||||| ||||| ||||||  |||||||||  ||| |||| ||| |||||||||||||||||||||  ||||||| |||||    
T  9799532 acttgtataccattaaggtaccaatgttatataacattgaccaacaagaatgtgccacataccaatgttactttataaatgttttatttaatata 9799438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 448 - 542
Target Start/End: Complemental strand, 49999757 - 49999663
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    ||||||||||||| ||| ||  |||| ||| | | ||||  ||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  49999757 acttgtgtaccatcaagatactaatgttatgtgtcattggtcaattagagtgtgtcacataccaatgttattttataaatgctttatttgatata 49999663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 466 - 539
Target Start/End: Original strand, 46719950 - 46720023
Alignment:
Q  466 tatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgat 539  Q
    |||||||| ||||||  |||||||||| |||||||| ||| ||| ||||||||||||||||| |||||||||||    
T  46719950 tatcaatgttatataacattgaccaataagagtgtgccacatacaaatgttactttataaatactttatttgat 46720023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 448 - 542
Target Start/End: Original strand, 47943160 - 47943255
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattatt-gaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    ||||||||||||||||  || ||||| |||||| |||| ||||||| | | |||| ||| ||||||| ||| |||||||||  |||||||||||||    
T  47943160 acttgtgtaccattaaaataccaatgttatataatatttgaccaataaaaatgtgccacataccaatattattttataaatattttatttgatata 47943255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 74; Significance: 2e-33; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 441 - 542
Target Start/End: Original strand, 34189 - 34290
Alignment:
Q  441 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgata 540  Q
    |||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||  |||||||||||    
T  34189 ggattccacttgtgtaccattaaggtaccaatggtatatattattggccaattagagtgtgccacttaccaatattactttataaatattttatttgata 34288  T
Q  541 ta 542  Q
    ||    
T  34289 ta 34290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 3e-32; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 439 - 542
Target Start/End: Original strand, 44380247 - 44380350
Alignment:
Q  439 atggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttga 538  Q
    |||||||| |||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||| || |||| ||||||||||||| ||||||||||    
T  44380247 atggattccacttgtgtaccattaaggtaccaatggtatatactattgaccaattatagtgtgtcacctatcaatattactttataaatgctttatttga 44380346  T
Q  539 tata 542  Q
    ||||    
T  44380347 tata 44380350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 448 - 542
Target Start/End: Original strand, 50934502 - 50934596
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||||||||||||||||| ||||||||||||  |||| |||||||||||||| ||||||||||||||||||||||||| | ||||||||||||    
T  50934502 acttgtgtaccattaaggtaccaatggtatataccattggccaattagagtgtgccacttaccaatgttactttataaatgcattatttgatata 50934596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 448 - 542
Target Start/End: Original strand, 47186177 - 47186271
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||||||||||||||||| ||||| ||||||  |||| ||||| |||||||| ||| ||||||||||||||||||||| ||||||||||||||    
T  47186177 acttgtgtaccattaaggtaccaatgttatataacattggccaataagagtgtgccacataccaatgttactttataaatactttatttgatata 47186271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 448 - 542
Target Start/End: Original strand, 47426352 - 47426446
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||||||||||||||||| |||| |||||||  |||| |||||||||||||||||| || ||||||||||||||| || ||||||||||||||    
T  47426352 acttgtgtaccattaaggtaccaatagtatataccattggccaattagagtgtgtcacctatcaatgttactttatagatgctttatttgatata 47426446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 448 - 542
Target Start/End: Complemental strand, 31187239 - 31187145
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||| ||||||||||||||| ||||| ||||||  |||||||||| |||||||| ||| |||||||||||||||||||||  |||||||||||||    
T  31187239 acttatgtaccattaaggtaccaatgttatataacattgaccaataagagtgtgccacataccaatgttactttataaatgttttatttgatata 31187145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 450 - 539
Target Start/End: Original strand, 33509684 - 33509773
Alignment:
Q  450 ttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgat 539  Q
    ||||||||||||||||||  ||| |||||||| ||||||||||||||||||| ||| ||||||| |||||||||| || |||||||||||    
T  33509684 ttgtgtaccattaaggtactaatagtatatatcattgaccaattagagtgtgccacctaccaatattactttatagatgctttatttgat 33509773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 448 - 542
Target Start/End: Original strand, 42664675 - 42664769
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||||||||||||||||| ||| | ||||||  |||||||||| |||||||| ||| ||||||||||| |||||||||  |||||||||||||    
T  42664675 acttgtgtaccattaaggtaccaaagttatataacattgaccaataagagtgtgccacataccaatgttattttataaatgttttatttgatata 42664769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 448 - 542
Target Start/End: Complemental strand, 34029460 - 34029366
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||| ||||||||||||| ||||| ||||||  ||||| |||| |||||||| ||| ||| |||||||||||||||||  |||||||||||||    
T  34029460 acttgtttaccattaaggtaccaatgttatataacattgatcaataagagtgtgccacatactaatgttactttataaatgttttatttgatata 34029366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 441 - 542
Target Start/End: Original strand, 17466268 - 17466369
Alignment:
Q  441 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgata 540  Q
    |||||| | |||||||| ||| |  |||||||||||||||| ||||  ||||||||||||||||| || ||||||||||||||||||  |||| ||||||    
T  17466268 ggattccatttgtgtacgattcaaatatcaatggtatatatcattggtcaattagagtgtgtcacctatcaatgttactttataaatgatttagttgata 17466367  T
Q  541 ta 542  Q
    ||    
T  17466368 ta 17466369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 448 - 542
Target Start/End: Complemental strand, 39498838 - 39498744
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||||||||||||| ||| ||||| ||||||||||||  |||||| |||||||||| || | |||||| |||||||||  ||||||| |||||    
T  39498838 acttgtgtaccattaaagtaccaatgatatatattattggtcaattaaagtgtgtcacctatcgatgttattttataaatattttatttaatata 39498744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 441 - 514
Target Start/End: Complemental strand, 32319541 - 32319468
Alignment:
Q  441 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatg 514  Q
    |||||| |||||||||||||||||||| ||||||||||||  |||| |||||||||||||| ||| ||| ||||    
T  32319541 ggattctacttgtgtaccattaaggtaccaatggtatataccattggccaattagagtgtgccacctacaaatg 32319468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 459 - 542
Target Start/End: Original strand, 37742738 - 37742821
Alignment:
Q  459 attaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    ||||||||| ||||||||||||| ||||  |||||||||| || ||| |||||||||||| |||  ||| ||||||||||||||    
T  37742738 attaaggtaccaatggtatatatcattggtcaattagagtatgccacctaccaatgttacattaccaatgctttatttgatata 37742821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 441 - 542
Target Start/End: Original strand, 35094541 - 35094644
Alignment:
Q  441 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaatta--gagtgtgtcacttaccaatgttactttataaattctttatttga 538  Q
    |||||| ||||  |||||||||| ||| || |||||||||  |||||| |||||  |||| || ||| |||||||||||||||||||||  |||||||||    
T  35094541 ggattccacttcagtaccattaaagtaccagtggtatataccattgactaattatagagtatgccacctaccaatgttactttataaatattttatttga 35094640  T
Q  539 tata 542  Q
    ||||    
T  35094641 tata 35094644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 441 - 512
Target Start/End: Complemental strand, 10179939 - 10179868
Alignment:
Q  441 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaa 512  Q
    |||||| |||||||||||||||| ||| ||||||||||||  ||||  ||||||||||||| ||| ||||||    
T  10179939 ggattccacttgtgtaccattaaagtaccaatggtatataccattggtcaattagagtgtgccacctaccaa 10179868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 448 - 499
Target Start/End: Complemental strand, 21963124 - 21963073
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtg 499  Q
    |||| ||||||||||||||||||||| ||||||  |||||||||| ||||||    
T  21963124 acttatgtaccattaaggtatcaatgttatataacattgaccaataagagtg 21963073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 1e-28; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 441 - 542
Target Start/End: Complemental strand, 39570219 - 39570118
Alignment:
Q  441 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgata 540  Q
    |||||| ||||||||| |||||| ||||||||||||||||  |||| |||||||||||||||||| |||||||||||||||||||||  |||||||||||    
T  39570219 ggattccacttgtgtatcattaaagtatcaatggtatataccattggccaattagagtgtgtcacctaccaatgttactttataaatgttttatttgata 39570120  T
Q  541 ta 542  Q
    ||    
T  39570119 ta 39570118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 451 - 628
Target Start/End: Complemental strand, 33858704 - 33858528
Alignment:
Q  451 tgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatatannnnnnnn 550  Q
    ||||||||||||||||| |||| |||||||| |||||||||||| |||||| ||| |||||||||||||||||||||  |||||||||||||            
T  33858704 tgtgtaccattaaggtaccaatagtatatatcattgaccaattatagtgtgccacctaccaatgttactttataaatgttttatttgatata-ctttttt 33858606  T
Q  551 aaagggtgtgtcatataacgcattttaattgggcaatggtataaaccattatagtacgcaggttctatctgtatttta 628  Q
    |||||||||| ||  | || |||| |||||||||||||||||| |||||||| |||| || || ||||| || |||||    
T  33858605 aaagggtgtgccacgtgacacattctaattgggcaatggtatataccattatggtacacaagtgctatccgtgtttta 33858528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 448 - 542
Target Start/End: Original strand, 29989964 - 29990058
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||||||||||||||||||||||| ||||||  |||||||||| |||||||| ||| |||||||||||||||||||||  |||||||||||||    
T  29989964 acttgtgtaccattaaggtatcaatgttatataacattgaccaataagagtgtgccacataccaatgttactttataaatgttttatttgatata 29990058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 443 - 542
Target Start/End: Complemental strand, 19357435 - 19357336
Alignment:
Q  443 attcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||| ||||||||||||||| |||| ||||||||||||  |||| |||||||||||||| ||| ||||||| ||||||||||||| ||||||||||||||    
T  19357435 attccacttgtgtaccattagggtaccaatggtatataccattggccaattagagtgtgccacctaccaatattactttataaatgctttatttgatata 19357336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 448 - 542
Target Start/End: Original strand, 13015383 - 13015477
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||||||||||||||||| ||||| ||||||  |||||||||| |||||||| ||| |||||||||||||||||||||  |||||||||||||    
T  13015383 acttgtgtaccattaaggtaccaatgttatataacattgaccaataagagtgtgccacataccaatgttactttataaatattttatttgatata 13015477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 448 - 542
Target Start/End: Complemental strand, 38010783 - 38010689
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||||||||||||||||| ||||| ||||||  |||| ||||| |||||||| ||| ||||||||||||||||||||| ||||||||||||||    
T  38010783 acttgtgtaccattaaggtaccaatgttatataacattggccaataagagtgtgccacataccaatgttactttataaatactttatttgatata 38010689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 441 - 542
Target Start/End: Complemental strand, 11607710 - 11607609
Alignment:
Q  441 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgata 540  Q
    |||||| |||||| ||||||||||||| ||||||||||||  |||||||||||| |||||| ||| ||||||| |||||||||||||  |||||||||||    
T  11607710 ggattccacttgtataccattaaggtaccaatggtatataccattgaccaattatagtgtgccacctaccaatattactttataaatgttttatttgata 11607611  T
Q  541 ta 542  Q
    ||    
T  11607610 ta 11607609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 448 - 541
Target Start/End: Original strand, 13086755 - 13086848
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatat 541  Q
    |||||||||||||||||||| ||||| ||||||  |||||||||| |||||||| ||| ||||||||||| |||||||||  ||||||||||||    
T  13086755 acttgtgtaccattaaggtaccaatgttatataacattgaccaataagagtgtgccacataccaatgttattttataaatattttatttgatat 13086848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 448 - 542
Target Start/End: Original strand, 1826261 - 1826355
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||||||||||||| ||| ||||||||||||  ||||  ||||||||||||||||| ||||||| ||||||| || || ||||||||||||||    
T  1826261 acttgtgtaccattaaagtaccaatggtatataccattggtcaattagagtgtgtcacctaccaatattactttgtagatgctttatttgatata 1826355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 448 - 542
Target Start/End: Complemental strand, 13421179 - 13421085
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||||||||||||||||||||||| ||||||  ||||| |||| ||||||| |||  || |||||||||||||||||| |||||||| |||||    
T  13421179 acttgtgtaccattaaggtatcaatgttatataacattgatcaataagagtgtatcaaatatcaatgttactttataaatgctttatttaatata 13421085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 448 - 542
Target Start/End: Complemental strand, 13478214 - 13478120
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||||||||||||||| | ||||| ||||||  |||||||||| |||||||| ||| ||||| |||||||||||||||  |||||||||||||    
T  13478214 acttgtgtaccattaaggaaccaatgttatataacattgaccaataagagtgtgccacataccattgttactttataaatattttatttgatata 13478120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 440 - 542
Target Start/End: Original strand, 9827782 - 9827884
Alignment:
Q  440 tggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgat 539  Q
    ||||||| |||||||||||||||||||| ||||||||||||   ||   ||||||||||||  ||| ||||||| |||||||||||||  ||||||||||    
T  9827782 tggattccacttgtgtaccattaaggtaccaatggtatatacctttagtcaattagagtgtaccacctaccaatattactttataaatattttatttgat 9827881  T
Q  540 ata 542  Q
    |||    
T  9827882 ata 9827884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 462 - 542
Target Start/End: Original strand, 33271630 - 33271710
Alignment:
Q  462 aaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||| ||||| ||||||| |||| |||||||||||||||||  || ||||||||||| |||||| ||||||||||||||    
T  33271630 aaggtaccaatgatatatatcattggccaattagagtgtgtcatctatcaatgttacttgataaatgctttatttgatata 33271710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 494 - 542
Target Start/End: Original strand, 37881189 - 37881237
Alignment:
Q  494 agagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||||| ||| |||||||||||||||||||||  |||||||||||||    
T  37881189 agagtgtgccacataccaatgttactttataaatattttatttgatata 37881237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 3e-26; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 441 - 542
Target Start/End: Original strand, 35341531 - 35341632
Alignment:
Q  441 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgata 540  Q
    |||||| |||||||||||||||||||| ||||| ||||||  |||||||||||| |||||| ||| |||||||||||||||||||||  |||||||||||    
T  35341531 ggattccacttgtgtaccattaaggtaccaatgatatataccattgaccaattatagtgtgccacctaccaatgttactttataaatgttttatttgata 35341630  T
Q  541 ta 542  Q
    ||    
T  35341631 ta 35341632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 448 - 541
Target Start/End: Original strand, 48250156 - 48250249
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatat 541  Q
    |||||||||||||||||||| ||||| ||||||| ||||  ||||||||||||| ||| |||||||||||||||||| || |||||||||||||    
T  48250156 acttgtgtaccattaaggtaccaatgatatatatcattggtcaattagagtgtgccacctaccaatgttactttatagatgctttatttgatat 48250249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 450 - 539
Target Start/End: Complemental strand, 31307041 - 31306951
Alignment:
Q  450 ttgtgtaccattaaggtatcaatggtatatattattgaccaatt-agagtgtgtcacttaccaatgttactttataaattctttatttgat 539  Q
    |||||||||||||| ||||||||| ||||||| |||| |||||| | ||||||  || ||||||||||||||||||||| |||||||||||    
T  31307041 ttgtgtaccattaaagtatcaatgatatatatcattgtccaatttaaagtgtgctacctaccaatgttactttataaatgctttatttgat 31306951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 490 - 607
Target Start/End: Complemental strand, 32694697 - 32694581
Alignment:
Q  490 aattagagtgtgtcacttaccaatgttactttataaattctttatttgatatannnnnnnnaaagggtgtgtcatataacgcattttaattgggcaatgg 589  Q
    |||||||||||  ||  || |||||||||||||||||||||||||||||||||        |||||||||| ||  | || |||| ||||| ||||||||    
T  32694697 aattagagtgtcccatctatcaatgttactttataaattctttatttgatata-tttttttaaagggtgtgccacgtgacacattctaattaggcaatgg 32694599  T
Q  590 tataaaccattatagtac 607  Q
    |||| |||||||||||||    
T  32694598 tatataccattatagtac 32694581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 448 - 510
Target Start/End: Original strand, 40856394 - 40856456
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttacc 510  Q
    |||| |||| ||||||||||  |||| ||||||||||||| ||||||||||||||||| ||||    
T  40856394 acttatgtatcattaaggtactaatgatatatattattgatcaattagagtgtgtcacctacc 40856456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 448 - 542
Target Start/End: Complemental strand, 40893211 - 40893116
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattc-tttatttgatata 542  Q
    |||||| |||||| || |||| |||||||||||  ||||  |||||||| ||| |||  || |||||||||||||||||| | |||||||||||||    
T  40893211 acttgtataccatcaaagtattaatggtatataccattggtcaattagaatgtctcatctatcaatgttactttataaatgcttttatttgatata 40893116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 442 - 539
Target Start/End: Original strand, 48072385 - 48072480
Alignment:
Q  442 gattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgat 539  Q
    ||||| |||||||||| ||||||||| |||| |||||    ||||| ||||||||||||| ||| |  |||||||| |||||||||  ||||||||||    
T  48072385 gattccacttgtgtactattaaggtaccaatagtatacc--attgatcaattagagtgtgccacatttcaatgttattttataaatattttatttgat 48072480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 4e-25; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 439 - 542
Target Start/End: Original strand, 32676129 - 32676232
Alignment:
Q  439 atggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttga 538  Q
    |||||||| |||||||||||||||||||| ||||||||||||  |||| ||||||||| ||   ||| ||||||||||||||||||||| ||||||||||    
T  32676129 atggattccacttgtgtaccattaaggtaccaatggtatataccattggccaattagaatgcaccacctaccaatgttactttataaatgctttatttga 32676228  T
Q  539 tata 542  Q
    ||||    
T  32676229 tata 32676232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 448 - 542
Target Start/End: Complemental strand, 8809809 - 8809715
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||||||||||||||||| ||||| ||||||  |||||||||| |||||||| ||| |||||||||||||||||||||  |||||||||||||    
T  8809809 acttgtgtaccattaaggtaccaatgttatataacattgaccaataagagtgtgccacgtaccaatgttactttataaatgttttatttgatata 8809715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 448 - 542
Target Start/End: Original strand, 2569039 - 2569133
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||||||||||||||||| ||||||||||||| |||  |||||||||||||| ||| |||||||||||| |||  ||| ||||||||||||||    
T  2569039 acttgtgtaccattaaggtaccaatggtatatatcatttgccaattagagtgtgccacctaccaatgttacattaccaatgctttatttgatata 2569133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 441 - 539
Target Start/End: Original strand, 25161304 - 25161402
Alignment:
Q  441 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgat 539  Q
    |||||| |||||||||||||||| || |||||||||||||  |||||||||||| |||||| ||| || ||||||||||||||||||  ||||||||||    
T  25161304 ggattccacttgtgtaccattaaagtctcaatggtatataccattgaccaattacagtgtgccacctaacaatgttactttataaatgttttatttgat 25161402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 448 - 542
Target Start/End: Complemental strand, 29119493 - 29119399
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||||||||||||||||| ||||||||||||  |||| |||||||||||||| ||| || || |||||||||||| || ||||||||||||||    
T  29119493 acttgtgtaccattaaggtaccaatggtatataccattggccaattagagtgtgccacctatcattgttactttatagatgctttatttgatata 29119399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 448 - 542
Target Start/End: Original strand, 6223053 - 6223147
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||||||||||||| ||||||||| ||||||| ||||| ||||||  ||||||||  || |||||||| ||||||| |  |||||||||||||    
T  6223053 acttgtgtaccattaaagtatcaatgttatatatcattgatcaattaaggtgtgtcatatatcaatgttattttataagtattttatttgatata 6223147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 450 - 527
Target Start/End: Complemental strand, 7214578 - 7214501
Alignment:
Q  450 ttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaat 527  Q
    ||||||||||||||||||  ||| |||||||||||||  ||||||||||||||||| || | || |||||||||||||    
T  7214578 ttgtgtaccattaaggtactaatagtatatattattggtcaattagagtgtgtcacctatcgatattactttataaat 7214501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 441 - 542
Target Start/End: Original strand, 8462124 - 8462224
Alignment:
Q  441 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgata 540  Q
    |||||| |||||||||  ||||| ||| ||||||||||||| ||||| |||||| |||||| ||| ||||||||||| |||||||||  ||||||| |||    
T  8462124 ggattccacttgtgtat-attaaagtaccaatggtatatatcattgatcaattatagtgtgccacctaccaatgttattttataaatgttttatttaata 8462222  T
Q  541 ta 542  Q
    ||    
T  8462223 ta 8462224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 448 - 505
Target Start/End: Complemental strand, 46435622 - 46435565
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcac 505  Q
    |||||||||||||||||||| ||||||||||||  |||| |||||||||||| |||||    
T  46435622 acttgtgtaccattaaggtaccaatggtatatacaattggccaattagagtgcgtcac 46435565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 475 - 538
Target Start/End: Complemental strand, 3688980 - 3688917
Alignment:
Q  475 tatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttga 538  Q
    ||||||| ||||||||||||||||||   || |||||||||||||||||||||  |||||||||    
T  3688980 tatatatcattgaccaattagagtgtacaacctaccaatgttactttataaatgttttatttga 3688917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 551 - 607
Target Start/End: Complemental strand, 46435532 - 46435476
Alignment:
Q  551 aaagggtgtgtcatataacgcattttaattgggcaatggtataaaccattatagtac 607  Q
    ||||||||||||| || || |||| |||||||||||||||||| |||||||| ||||    
T  46435532 aaagggtgtgtcacatgacacattctaattgggcaatggtatataccattatggtac 46435476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 448 - 542
Target Start/End: Original strand, 35998254 - 35998348
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||| ||||||||||||| ||||| ||||||  |||||  ||| |||||||| ||| || |||||||| ||||||| |  ||||||| |||||    
T  35998254 acttgtataccattaaggtaccaatgttatataacattgattaataagagtgtgccacatatcaatgttattttataagtgttttattttatata 35998348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 448 - 505
Target Start/End: Complemental strand, 16679867 - 16679811
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcac 505  Q
    |||||||||||||||||||| ||||| |||||| ||||| ||||||||  ||||||||    
T  16679867 acttgtgtaccattaaggtaccaatgttatatactattg-ccaattaggatgtgtcac 16679811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 2e-24; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 448 - 542
Target Start/End: Original strand, 34245569 - 34245663
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    ||||||||||||||||||||| |||| ||||||  |||||||||| | |||||| ||| ||||||||||||||||||||| ||||||||||||||    
T  34245569 acttgtgtaccattaaggtattaatgttatataacattgaccaataaaagtgtgccacgtaccaatgttactttataaatactttatttgatata 34245663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 448 - 542
Target Start/End: Complemental strand, 5404045 - 5403951
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    ||||||||||||||||||||  |||||||||||||||||  || ||||||| || ||| |||||||||||||||||| ||  |||||||||||||    
T  5404045 acttgtgtaccattaaggtactaatggtatatattattggtcagttagagtctgccacctaccaatgttactttatagatgttttatttgatata 5403951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 448 - 539
Target Start/End: Original strand, 11113558 - 11113649
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgat 539  Q
    |||||||||||||||||||| ||||| ||||||  |||||| ||| |||||||||||| ||| ||||||||||| ||| | |||||||||||    
T  11113558 acttgtgtaccattaaggtaccaatgctatataacattgactaataagagtgtgtcacatactaatgttactttgtaagtgctttatttgat 11113649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 439 - 542
Target Start/End: Complemental strand, 32645014 - 32644912
Alignment:
Q  439 atggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttga 538  Q
    |||||||| || |||||||||||||| |||| || |||||||| |||| |||||||  ||||||||| ||| |||||||||||| |||| |||||||||     
T  32645014 atggattccacctgtgtaccattaagatatcgatagtatatatcattggccaattaaggtgtgtcacctacaaatgttacttta-aaatactttatttgt 32644916  T
Q  539 tata 542  Q
    ||||    
T  32644915 tata 32644912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 448 - 542
Target Start/End: Complemental strand, 1212013 - 1211919
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||||||||||||||||| ||||||||||||  |||| | |||||| ||||| ||| |  ||||||||||||||  || ||||||||||||||    
T  1212013 acttgtgtaccattaaggtaccaatggtatataccattggctaattagtgtgtgccacctttcaatgttactttatcgatgctttatttgatata 1211919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 448 - 500
Target Start/End: Original strand, 11753169 - 11753221
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgt 500  Q
    |||||||||||||||||||| ||||||||||||  || | |||||||||||||    
T  11753169 acttgtgtaccattaaggtaccaatggtatataccatcggccaattagagtgt 11753221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 7e-24; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 453 - 542
Target Start/End: Original strand, 18168392 - 18168481
Alignment:
Q  453 tgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    ||||||||||||||| ||||||||||||| ||||| ||||||||||||  ||| ||||||| ||||||||||||| ||||||||||||||    
T  18168392 tgtaccattaaggtaccaatggtatatatcattgatcaattagagtgtcccacctaccaatcttactttataaatactttatttgatata 18168481  T

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Target: chr8; HSP #2
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 453 - 542
Target Start/End: Original strand, 18631949 - 18632038
Alignment:
Q  453 tgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    ||||||||||||||| ||||||||||||| ||||| ||||||||||||  ||| ||||||| ||||||||||||| ||||||||||||||    
T  18631949 tgtaccattaaggtaccaatggtatatatcattgatcaattagagtgtcccacctaccaatcttactttataaatactttatttgatata 18632038  T

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Target: chr8; HSP #3
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 441 - 542
Target Start/End: Complemental strand, 41179739 - 41179638
Alignment:
Q  441 ggattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgata 540  Q
    |||||| |||||||||||||||||||| ||||| ||||||| |||| ||||||| |||||||||| |||| ||||||||||||||||  ||||||| |||    
T  41179739 ggattccacttgtgtaccattaaggtaccaatgatatatatcattggccaattaaagtgtgtcacctaccgatgttactttataaatgttttatttaata 41179640  T
Q  541 ta 542  Q
    ||    
T  41179639 ta 41179638  T

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Target: chr8; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 448 - 542
Target Start/End: Original strand, 1514805 - 1514899
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||||||||||||||||| ||||| ||||||  ||||| |||| |||||||  ||| |||||||||||||||||||||  |||||||||||||    
T  1514805 acttgtgtaccattaaggtaccaatgttatataacattgatcaataagagtgtaccacataccaatgttactttataaatgttttatttgatata 1514899  T

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Target: chr8; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 448 - 607
Target Start/End: Complemental strand, 24337999 - 24337841
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatatannnnn 547  Q
    |||||||||| ||||||||| ||||||||||||  || |  ||||||||||||| ||  |||||||||||||||||| || ||||||||||||||         
T  24337999 acttgtgtactattaaggtagcaatggtatataccatcggtcaattagagtgtgccatctaccaatgttactttatagatgctttatttgatata-tatt 24337901  T
Q  548 nnnaaagggtgtgtcatataacgcattttaattgggcaatggtataaaccattatagtac 607  Q
       |||||||||| || ||| | |||| ||||||| |||||||||| |||||||| ||||    
T  24337900 tttaaagggtgtgccacatagcacattctaattggacaatggtatataccattatggtac 24337841  T

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Target: chr8; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 454 - 542
Target Start/End: Complemental strand, 4708470 - 4708382
Alignment:
Q  454 gtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||| ||||||| |||||| |||||| ||   ||||||| |||||||||| |||||||||||||||||||||  |||||||||||||    
T  4708470 gtaccactaaggtaccaatggcatatatcatgcgccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatata 4708382  T

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Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 442 - 542
Target Start/End: Complemental strand, 11254202 - 11254103
Alignment:
Q  442 gattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatat 541  Q
    ||||| ||||||||||||||||  || ||||| ||||||| |||||||| ||| ||| |  ||| |||||||||||||||||||||  ||||||||||||    
T  11254202 gattccacttgtgtaccattaaattaccaatgatatatatcattgacca-ttatagtataccacctaccaatgttactttataaatgttttatttgatat 11254104  T

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Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 448 - 542
Target Start/End: Complemental strand, 32826004 - 32825910
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||||||||||||| ||||||||| | ||||  |||| ||||||||||| |||||| || |||||||| ||||||  |  |||||||||||||    
T  32826004 acttgtgtaccattaaagtatcaatgttgtataccattggccaattagagtatgtcacatatcaatgttattttatatgtgttttatttgatata 32825910  T

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Target: scaffold0229 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 448 - 542
Target Start/End: Complemental strand, 13175 - 13081
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||||||||||||||||| ||||||||||||  |||| | |||||| ||||| ||| |  ||||||||||||||  || ||||||||||||||    
T  13175 acttgtgtaccattaaggtaccaatggtatataccattggctaattagtgtgtgccacctttcaatgttactttatcgatgctttatttgatata 13081  T

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Target: scaffold0519 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 442 - 542
Target Start/End: Original strand, 11191 - 11290
Alignment:
Q  442 gattcaacttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatat 541  Q
    ||||| ||||||||||||||||  || ||||| ||||||| |||||||| ||| ||| |  ||| |||||||||||||||||||||  ||||||||||||    
T  11191 gattccacttgtgtaccattaaattaccaatgatatatatcattgacca-ttatagtataccacctaccaatgttactttataaatgttttatttgatat 11289  T

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Target: scaffold0263 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 476 - 542
Target Start/End: Complemental strand, 23240 - 23174
Alignment:
Q  476 atatattattgaccaattagagtgtgtcacttaccaatgttactttataaattctttatttgatata 542  Q
    |||||| |||| |||||||||||||| ||| ||||||| |||||||||||||  |||||||||||||    
T  23240 atatatcattggccaattagagtgtgccacctaccaattttactttataaatattttatttgatata 23174  T

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Target: scaffold0263; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 448 - 505
Target Start/End: Original strand, 23095 - 23152
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcac 505  Q
    ||||||||| |||||||||| |||||||||||| ||||| |||||||| || ||||||    
T  23095 acttgtgtatcattaaggtaccaatggtatatactattggccaattagggtctgtcac 23152  T

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Target: scaffold0041 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 448 - 542
Target Start/End: Original strand, 73073 - 73168
Alignment:
Q  448 acttgtgtaccattaaggtatcaatggtatatattattgaccaattagagtgtgtcacttaccaatgttactttataaattc-tttatttgatata 542  Q
    |||||| |||||| || |||| |||||||||||  ||||  |||||||| ||| |||  || |||||||||||||||||| | |||||||||||||    
T  73073 acttgtataccatcaaagtattaatggtatataccattggtcaattagaatgtctcatctatcaatgttactttataaatgcttttatttgatata 73168  T

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