View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18830_low_8 (Length: 219)

Name: NF18830_low_8
Description: NF18830
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18830_low_8
NF18830_low_8
[»] chr5 (32 HSPs)
chr5 (102-219)||(23507072-23507189)
chr5 (102-218)||(29188312-29188428)
chr5 (102-219)||(18531106-18531223)
chr5 (102-219)||(22053872-22053989)
chr5 (102-219)||(27182586-27182703)
chr5 (103-218)||(34939385-34939500)
chr5 (111-218)||(27009958-27010065)
chr5 (111-218)||(43443423-43443530)
chr5 (111-218)||(4200013-4200120)
chr5 (111-218)||(18778020-18778127)
chr5 (111-218)||(22366509-22366616)
chr5 (111-218)||(19500016-19500123)
chr5 (111-218)||(25426745-25426852)
chr5 (126-219)||(20623100-20623193)
chr5 (126-219)||(21233567-21233660)
chr5 (111-218)||(12491-12598)
chr5 (111-218)||(21073623-21073730)
chr5 (126-219)||(25900445-25900538)
chr5 (126-219)||(16536328-16536421)
chr5 (126-219)||(37052875-37052968)
chr5 (133-208)||(10778012-10778089)
chr5 (133-208)||(23514698-23514775)
chr5 (146-219)||(23981539-23981614)
chr5 (162-205)||(32950862-32950905)
chr5 (162-208)||(11212107-11212153)
chr5 (162-208)||(17471630-17471676)
chr5 (158-219)||(19862371-19862433)
chr5 (158-219)||(21310732-21310794)
chr5 (133-208)||(1219562-1219639)
chr5 (158-218)||(5450867-5450928)
chr5 (160-219)||(22885806-22885866)
chr5 (160-219)||(29918129-29918189)
[»] chr3 (34 HSPs)
chr3 (102-219)||(51158057-51158174)
chr3 (102-219)||(15859063-15859180)
chr3 (102-219)||(15936666-15936783)
chr3 (102-219)||(12030186-12030303)
chr3 (102-219)||(2049917-2050034)
chr3 (102-219)||(13839001-13839118)
chr3 (102-219)||(14842600-14842717)
chr3 (102-219)||(15938508-15938625)
chr3 (102-214)||(15614941-15615053)
chr3 (111-219)||(17912521-17912629)
chr3 (111-218)||(55316336-55316443)
chr3 (111-218)||(16821256-16821363)
chr3 (111-218)||(41270192-41270299)
chr3 (111-213)||(13975766-13975868)
chr3 (111-213)||(45860922-45861024)
chr3 (111-213)||(13954934-13955036)
chr3 (126-219)||(2449277-2449370)
chr3 (126-219)||(16744154-16744247)
chr3 (109-208)||(54651571-54651671)
chr3 (102-208)||(11986216-11986323)
chr3 (134-219)||(4145837-4145923)
chr3 (133-208)||(12902132-12902209)
chr3 (133-208)||(18911130-18911207)
chr3 (133-208)||(25058876-25058953)
chr3 (133-208)||(49232573-49232650)
chr3 (139-208)||(5228456-5228527)
chr3 (134-219)||(6228648-6228735)
chr3 (139-208)||(12264834-12264905)
chr3 (162-208)||(15468382-15468428)
chr3 (162-208)||(22275377-22275423)
chr3 (158-219)||(34560061-34560123)
chr3 (158-219)||(47784789-47784851)
chr3 (159-219)||(3576461-3576522)
chr3 (106-219)||(14814788-14814902)
[»] chr8 (27 HSPs)
chr8 (102-218)||(6774286-6774402)
chr8 (102-218)||(24549089-24549205)
chr8 (102-215)||(43373511-43373624)
chr8 (108-219)||(16193755-16193866)
chr8 (102-219)||(16405014-16405131)
chr8 (102-219)||(24928830-24928947)
chr8 (111-218)||(21844600-21844707)
chr8 (111-218)||(21851993-21852100)
chr8 (102-218)||(17345676-17345792)
chr8 (111-218)||(30120839-30120946)
chr8 (111-218)||(16674420-16674527)
chr8 (126-219)||(5238218-5238311)
chr8 (126-219)||(22907253-22907346)
chr8 (126-219)||(24661287-24661380)
chr8 (126-219)||(43685677-43685770)
chr8 (111-183)||(222754-222826)
chr8 (111-183)||(736377-736449)
chr8 (111-183)||(860272-860344)
chr8 (125-183)||(691909-691967)
chr8 (158-219)||(26011656-26011718)
chr8 (133-208)||(13720970-13721047)
chr8 (133-208)||(16873093-16873170)
chr8 (133-208)||(22006300-22006377)
chr8 (139-208)||(16195374-16195445)
chr8 (158-219)||(15933460-15933522)
chr8 (106-219)||(33172338-33172452)
chr8 (134-216)||(37653642-37653726)
[»] scaffold0266 (2 HSPs)
scaffold0266 (102-219)||(3621-3738)
scaffold0266 (102-219)||(1231-1348)
[»] scaffold0195 (2 HSPs)
scaffold0195 (102-219)||(19313-19430)
scaffold0195 (102-219)||(21397-21514)
[»] scaffold0025 (3 HSPs)
scaffold0025 (102-219)||(148828-148945)
scaffold0025 (102-219)||(8956-9073)
scaffold0025 (158-219)||(53508-53570)
[»] chr7 (38 HSPs)
chr7 (102-219)||(18253874-18253991)
chr7 (102-218)||(16478990-16479106)
chr7 (102-218)||(47481071-47481187)
chr7 (102-219)||(11580778-11580895)
chr7 (102-219)||(16211873-16211990)
chr7 (102-215)||(36052771-36052884)
chr7 (102-219)||(13037053-13037170)
chr7 (111-218)||(13572793-13572900)
chr7 (111-218)||(10989526-10989633)
chr7 (111-218)||(13911052-13911159)
chr7 (102-219)||(3060073-3060190)
chr7 (110-218)||(2437573-2437681)
chr7 (102-218)||(13321122-13321239)
chr7 (112-219)||(25292377-25292484)
chr7 (126-219)||(11516358-11516451)
chr7 (126-219)||(15441603-15441696)
chr7 (126-219)||(30262168-30262261)
chr7 (126-219)||(7293147-7293240)
chr7 (105-218)||(296006-296119)
chr7 (158-219)||(16914951-16915013)
chr7 (158-208)||(48622708-48622758)
chr7 (133-208)||(13758507-13758584)
chr7 (133-208)||(15927705-15927782)
chr7 (133-208)||(15950833-15950910)
chr7 (133-208)||(18980063-18980140)
chr7 (134-219)||(14935497-14935584)
chr7 (134-219)||(15358934-15359021)
chr7 (134-219)||(15363090-15363177)
chr7 (134-219)||(28722247-28722334)
chr7 (158-219)||(9611470-9611532)
chr7 (158-219)||(9839041-9839103)
chr7 (143-219)||(14271922-14272000)
chr7 (158-219)||(48356806-48356868)
chr7 (158-218)||(13377691-13377752)
chr7 (134-202)||(13448868-13448937)
chr7 (133-208)||(14250940-14251017)
chr7 (133-208)||(15760156-15760233)
chr7 (158-217)||(49047699-49047759)
[»] chr4 (26 HSPs)
chr4 (102-219)||(121996-122113)
chr4 (102-219)||(10104289-10104406)
chr4 (102-219)||(15675128-15675245)
chr4 (102-219)||(13246537-13246654)
chr4 (102-219)||(54118283-54118400)
chr4 (102-219)||(31115736-31115853)
chr4 (111-218)||(10644336-10644443)
chr4 (111-219)||(13048260-13048368)
chr4 (126-219)||(26680331-26680424)
chr4 (111-218)||(47357771-47357878)
chr4 (126-219)||(10488693-10488786)
chr4 (126-219)||(16327965-16328058)
chr4 (102-218)||(40885594-40885710)
chr4 (103-218)||(7850107-7850223)
chr4 (109-206)||(17145701-17145799)
chr4 (133-208)||(22738406-22738483)
chr4 (110-208)||(8374623-8374722)
chr4 (133-208)||(7132107-7132184)
chr4 (133-208)||(18169107-18169184)
chr4 (133-208)||(19020623-19020700)
chr4 (185-219)||(33240890-33240924)
chr4 (158-218)||(15044990-15045051)
chr4 (158-218)||(15109373-15109434)
chr4 (106-219)||(18238180-18238294)
chr4 (133-208)||(20000860-20000937)
chr4 (160-219)||(38764873-38764933)
[»] chr1 (17 HSPs)
chr1 (102-215)||(45051530-45051643)
chr1 (102-218)||(2116362-2116478)
chr1 (102-219)||(41394329-41394446)
chr1 (102-219)||(20893665-20893782)
chr1 (102-219)||(20913137-20913254)
chr1 (105-219)||(20931455-20931569)
chr1 (102-219)||(20445786-20445903)
chr1 (102-219)||(20531551-20531668)
chr1 (102-208)||(22227916-22228022)
chr1 (102-208)||(22232613-22232719)
chr1 (111-218)||(18601146-18601253)
chr1 (111-218)||(5072416-5072523)
chr1 (102-219)||(37844489-37844607)
chr1 (126-219)||(51452623-51452716)
chr1 (133-208)||(17148704-17148781)
chr1 (1-32)||(41394228-41394259)
chr1 (133-208)||(18059800-18059877)
[»] scaffold0420 (1 HSPs)
scaffold0420 (102-218)||(13353-13469)
[»] scaffold0215 (2 HSPs)
scaffold0215 (102-218)||(9377-9493)
scaffold0215 (102-218)||(16275-16391)
[»] scaffold0175 (1 HSPs)
scaffold0175 (102-219)||(995-1112)
[»] scaffold0049 (1 HSPs)
scaffold0049 (102-219)||(48294-48411)
[»] chr6 (23 HSPs)
chr6 (102-215)||(1650136-1650249)
chr6 (102-219)||(23153554-23153671)
chr6 (102-218)||(14626158-14626274)
chr6 (106-215)||(35009482-35009591)
chr6 (102-218)||(1657788-1657904)
chr6 (102-218)||(15862578-15862694)
chr6 (111-218)||(25175680-25175787)
chr6 (111-218)||(27654011-27654118)
chr6 (111-218)||(16825780-16825889)
chr6 (102-210)||(29665980-29666089)
chr6 (173-218)||(27751603-27751648)
chr6 (160-219)||(29605614-29605673)
chr6 (158-219)||(18629631-18629693)
chr6 (133-208)||(1556142-1556219)
chr6 (133-208)||(16232029-16232106)
chr6 (143-219)||(17083221-17083298)
chr6 (133-208)||(18086865-18086942)
chr6 (133-208)||(23977906-23977983)
chr6 (103-177)||(27740946-27741021)
chr6 (158-219)||(16887815-16887877)
chr6 (158-219)||(25651399-25651461)
chr6 (133-208)||(13620836-13620913)
chr6 (133-208)||(22225780-22225857)
[»] scaffold0413 (1 HSPs)
scaffold0413 (102-219)||(6103-6220)
[»] scaffold0077 (1 HSPs)
scaffold0077 (102-219)||(36952-37069)
[»] scaffold0023 (3 HSPs)
scaffold0023 (102-219)||(48705-48822)
scaffold0023 (111-218)||(36210-36317)
scaffold0023 (133-208)||(154049-154126)
[»] scaffold0011 (1 HSPs)
scaffold0011 (102-219)||(123203-123320)
[»] chr2 (29 HSPs)
chr2 (102-219)||(462845-462962)
chr2 (102-219)||(8891349-8891466)
chr2 (102-219)||(19794743-19794860)
chr2 (102-219)||(20627352-20627469)
chr2 (102-219)||(24341428-24341545)
chr2 (102-219)||(36982480-36982597)
chr2 (106-218)||(25265430-25265542)
chr2 (110-219)||(43642996-43643105)
chr2 (102-208)||(7507894-7508000)
chr2 (111-213)||(17396697-17396799)
chr2 (126-219)||(19689440-19689533)
chr2 (126-219)||(23820202-23820295)
chr2 (111-218)||(19886689-19886796)
chr2 (126-219)||(14906479-14906572)
chr2 (126-219)||(20015142-20015235)
chr2 (133-208)||(3798645-3798722)
chr2 (133-208)||(12635910-12635987)
chr2 (133-208)||(12728529-12728606)
chr2 (133-208)||(34824612-34824689)
chr2 (161-219)||(19669132-19669191)
chr2 (133-210)||(23778085-23778164)
chr2 (158-219)||(24884848-24884910)
chr2 (158-218)||(68154-68215)
chr2 (133-208)||(8943983-8944060)
chr2 (133-208)||(12641684-12641761)
chr2 (133-208)||(16935730-16935807)
chr2 (133-208)||(17006390-17006467)
chr2 (133-208)||(42178011-42178088)
chr2 (160-219)||(19660044-19660104)
[»] scaffold0218 (1 HSPs)
scaffold0218 (102-219)||(5100-5217)
[»] scaffold0026 (2 HSPs)
scaffold0026 (102-219)||(107854-107971)
scaffold0026 (111-201)||(64573-64663)
[»] scaffold0529 (1 HSPs)
scaffold0529 (102-218)||(3070-3186)
[»] scaffold1542 (1 HSPs)
scaffold1542 (102-219)||(573-690)
[»] scaffold0302 (1 HSPs)
scaffold0302 (102-219)||(12220-12337)
[»] scaffold0162 (2 HSPs)
scaffold0162 (102-219)||(26454-26571)
scaffold0162 (106-218)||(8220-8332)
[»] scaffold0106 (1 HSPs)
scaffold0106 (102-219)||(41836-41953)
[»] scaffold0498 (1 HSPs)
scaffold0498 (102-218)||(8985-9101)
[»] scaffold0132 (1 HSPs)
scaffold0132 (106-218)||(13617-13729)
[»] scaffold0125 (1 HSPs)
scaffold0125 (106-218)||(41759-41871)
[»] scaffold0018 (1 HSPs)
scaffold0018 (112-219)||(51221-51328)
[»] scaffold0022 (1 HSPs)
scaffold0022 (102-208)||(5254-5360)
[»] scaffold0001 (2 HSPs)
scaffold0001 (102-219)||(172012-172129)
scaffold0001 (102-219)||(177715-177832)
[»] scaffold0012 (2 HSPs)
scaffold0012 (102-219)||(247481-247598)
scaffold0012 (134-208)||(34200-34276)
[»] scaffold0009 (1 HSPs)
scaffold0009 (102-219)||(272132-272249)
[»] scaffold0139 (2 HSPs)
scaffold0139 (102-218)||(14089-14205)
scaffold0139 (102-218)||(21144-21260)
[»] scaffold0075 (1 HSPs)
scaffold0075 (102-218)||(34500-34616)
[»] scaffold0028 (1 HSPs)
scaffold0028 (107-219)||(89493-89605)
[»] scaffold0772 (1 HSPs)
scaffold0772 (111-218)||(5645-5752)
[»] scaffold0116 (1 HSPs)
scaffold0116 (111-218)||(152-259)
[»] scaffold0076 (1 HSPs)
scaffold0076 (111-218)||(43114-43221)
[»] scaffold0008 (2 HSPs)
scaffold0008 (109-219)||(128208-128318)
scaffold0008 (111-218)||(31703-31810)
[»] scaffold1711 (1 HSPs)
scaffold1711 (111-218)||(1332-1439)
[»] scaffold0369 (1 HSPs)
scaffold0369 (102-208)||(3829-3936)
[»] scaffold0141 (2 HSPs)
scaffold0141 (126-219)||(22671-22764)
scaffold0141 (126-219)||(26926-27019)
[»] scaffold0124 (1 HSPs)
scaffold0124 (126-219)||(1621-1714)
[»] scaffold0078 (1 HSPs)
scaffold0078 (126-219)||(37105-37198)
[»] scaffold0066 (2 HSPs)
scaffold0066 (109-208)||(45144-45244)
scaffold0066 (109-208)||(54530-54630)
[»] scaffold0361 (1 HSPs)
scaffold0361 (102-215)||(3296-3410)
[»] scaffold0084 (1 HSPs)
scaffold0084 (102-208)||(56149-56256)
[»] scaffold0892 (1 HSPs)
scaffold0892 (110-206)||(3529-3625)
[»] scaffold0017 (1 HSPs)
scaffold0017 (110-208)||(53990-54088)
[»] scaffold0138 (1 HSPs)
scaffold0138 (102-219)||(22452-22570)
[»] scaffold0123 (1 HSPs)
scaffold0123 (158-219)||(8172-8234)
[»] scaffold0761 (1 HSPs)
scaffold0761 (133-208)||(1617-1694)
[»] scaffold0467 (1 HSPs)
scaffold0467 (133-208)||(10381-10458)
[»] scaffold0193 (1 HSPs)
scaffold0193 (134-219)||(4742-4829)
[»] scaffold0151 (1 HSPs)
scaffold0151 (146-219)||(22445-22520)
[»] scaffold1666 (1 HSPs)
scaffold1666 (162-208)||(38-84)
[»] scaffold0700 (1 HSPs)
scaffold0700 (158-219)||(2687-2749)
[»] scaffold0483 (1 HSPs)
scaffold0483 (158-219)||(6823-6885)
[»] scaffold0409 (2 HSPs)
scaffold0409 (143-219)||(1371-1449)
scaffold0409 (143-219)||(9626-9704)
[»] scaffold0053 (1 HSPs)
scaffold0053 (158-219)||(76870-76932)
[»] scaffold1500 (1 HSPs)
scaffold1500 (133-208)||(1556-1633)
[»] scaffold1272 (1 HSPs)
scaffold1272 (158-218)||(456-517)
[»] scaffold0243 (1 HSPs)
scaffold0243 (158-218)||(2340-2401)
[»] scaffold0107 (1 HSPs)
scaffold0107 (133-208)||(39783-39860)
[»] scaffold0080 (1 HSPs)
scaffold0080 (158-218)||(43822-43883)


Alignment Details
Target: chr5 (Bit Score: 118; Significance: 2e-60; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 23507072 - 23507189
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23507072 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 23507171  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  23507172 tcatgcatacaaacatat 23507189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 102 - 218
Target Start/End: Complemental strand, 29188428 - 29188312
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29188428 aacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 29188329  T
Q  202 tcatgcatacaaacata 218  Q
    |||||||||||||||||    
T  29188328 tcatgcatacaaacata 29188312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 18531223 - 18531106
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||||||||||| |||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18531223 aacttagcaaaattcaccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaat 18531124  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  18531123 tcatgcatacaaacatat 18531106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 22053989 - 22053872
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  22053989 aacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaactatcatcaat 22053890  T
Q  202 tcatgcatacaaacatat 219  Q
    |||| |||||||||||||    
T  22053889 tcatacatacaaacatat 22053872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 27182703 - 27182586
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||| ||||||||||||||||||||||| |    
T  27182703 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcatcaacaatcatacaattatcatcagt 27182604  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  27182603 tcatgcatacaaacatat 27182586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 103 - 218
Target Start/End: Original strand, 34939385 - 34939500
Alignment:
Q  103 acttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaatt 202  Q
    |||||||||||| || ||||||||||||||||||| |||||  |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  34939385 acttagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaatt 34939484  T
Q  203 catgcatacaaacata 218  Q
    ||||||||||||||||    
T  34939485 catgcatacaaacata 34939500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 27009958 - 27010065
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    |||||||||||||||| ||||| |||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  27009958 aaattcaccaattgagtacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcata 27010057  T
Q  211 caaacata 218  Q
    ||||||||    
T  27010058 caaacata 27010065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 43443530 - 43443423
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  43443530 aaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcata 43443431  T
Q  211 caaacata 218  Q
    ||||||||    
T  43443430 caaacata 43443423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 4200120 - 4200013
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    ||||||||||||| |||| ||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  4200120 aaattcaccaatttagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcata 4200021  T
Q  211 caaacata 218  Q
    ||||||||    
T  4200020 caaacata 4200013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 18778127 - 18778020
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    ||||||||||||| |||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||    
T  18778127 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 18778028  T
Q  211 caaacata 218  Q
    ||||||||    
T  18778027 caaacata 18778020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 22366616 - 22366509
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    ||||||||||||| |||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||    
T  22366616 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 22366517  T
Q  211 caaacata 218  Q
    ||||||||    
T  22366516 caaacata 22366509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 19500016 - 19500123
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    |||||||||| || |||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||    
T  19500016 aaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 19500115  T
Q  211 caaacata 218  Q
    ||||||||    
T  19500116 caaacata 19500123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 25426745 - 25426852
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    |||||||||| || |||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||    
T  25426745 aaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 25426844  T
Q  211 caaacata 218  Q
    ||||||||    
T  25426845 caaacata 25426852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 20623100 - 20623193
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  20623100 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatat 20623193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 21233660 - 21233567
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  21233660 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatat 21233567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 12491 - 12598
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    |||||||||| || |||||||| |||| ||||||||| |||| ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||    
T  12491 aaattcaccactttagcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 12590  T
Q  211 caaacata 218  Q
    ||||||||    
T  12591 caaacata 12598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 21073730 - 21073623
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    |||||||||| || |||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || |||| |||||||||||    
T  21073730 aaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatccattcatgcata 21073631  T
Q  211 caaacata 218  Q
    ||||||||    
T  21073630 caaacata 21073623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 25900538 - 25900445
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| ||||||| |||||||  ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25900538 gcacaattttcataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaattatcatcaattcatgcatacaaacatat 25900445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 16536328 - 16536421
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| || |||||||||||||||||||||    
T  16536328 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattataaattcatgcatacaaacatat 16536421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 37052875 - 37052968
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| ||||||  |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  37052875 gcacaattttcataacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatat 37052968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 10778089 - 10778012
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  10778089 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 10778012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 23514698 - 23514775
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  23514698 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 23514775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 23981614 - 23981539
Alignment:
Q  146 catttttacata-tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    ||||| |||||| |||||||||| || |||||||||||  || ||||||||| ||| |||||||||||||||||||    
T  23981614 catttatacatactttgaacatgcaaattcaccaacaacaattcaattatcaccaatttcatgcatacaaacatat 23981539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 205
Target Start/End: Original strand, 32950862 - 32950905
Alignment:
Q  162 aacatgtaatttcaccaacaatcatacaattatcatcaattcat 205  Q
    |||||||||||||| | |||||||||||||||||||||| ||||    
T  32950862 aacatgtaatttcaaccacaatcatacaattatcatcaaatcat 32950905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 11212153 - 11212107
Alignment:
Q  162 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  11212153 aacatgtaatttcacccacaaacataccataatcatcaattcatgca 11212107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 17471676 - 17471630
Alignment:
Q  162 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  17471676 aacatgtaatttcacccacaaacataccataatcatcaattcatgca 17471630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 19862371 - 19862433
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||    
T  19862371 tttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatat 19862433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 21310794 - 21310732
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||    
T  21310794 tttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatat 21310732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 1219639 - 1219562
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || |||||||||| |||||    
T  1219639 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattaatgca 1219562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 5450928 - 5450867
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacata 218  Q
    |||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| ||||||||    
T  5450928 tttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacata 5450867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 22885806 - 22885866
Alignment:
Q  160 tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||    
T  22885806 tgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatat 22885866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 29918129 - 29918189
Alignment:
Q  160 tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||| ||||||||||||||  || ||||||||||||| |||||| || |||||||||    
T  29918129 tgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgtattcaaacatat 29918189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 2e-60; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 51158174 - 51158057
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51158174 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 51158075  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  51158074 tcatgcatacaaacatat 51158057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 15859180 - 15859063
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15859180 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 15859081  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  15859080 tcatgcatacaaacatat 15859063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 15936783 - 15936666
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15936783 aacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 15936684  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  15936683 tcatgcatacaaacatat 15936666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 12030303 - 12030186
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12030303 aacttagcaaaattcaccaattgagcacaactttcacaacttatcacttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaat 12030204  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  12030203 tcatgcatacaaacatat 12030186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 2049917 - 2050034
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2049917 aacttagcaaaattcaccaattgagcacaattttcacaagttatcatgtttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaat 2050016  T
Q  202 tcatgcatacaaacatat 219  Q
    ||| ||||||||||||||    
T  2050017 tcaggcatacaaacatat 2050034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 13839001 - 13839118
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||| ||||||||||||||||||||||    
T  13839001 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaat 13839100  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  13839101 tcatgcatacaaacatat 13839118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 14842717 - 14842600
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||    
T  14842717 aacttagcaaaattcaccaattgagcacaattttcataacttatcatttttacacatttgaacatgcaatttcaccaacaatcatacaattatcttcaat 14842618  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  14842617 tcatgcatacaaacatat 14842600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 15938625 - 15938508
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15938625 aacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 15938526  T
Q  202 tcatgcatacaaacatat 219  Q
    |||||  |||||||||||    
T  15938525 tcatgattacaaacatat 15938508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 102 - 214
Target Start/End: Original strand, 15614941 - 15615053
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15614941 aacttagcaaaattcaccaattgagcaccatattcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcctacaattatcatcaat 15615040  T
Q  202 tcatgcatacaaa 214  Q
    |||||||||||||    
T  15615041 tcatgcatacaaa 15615053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 17912629 - 17912521
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    ||||||| |||||  |||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17912629 aaattcatcaattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 17912530  T
Q  211 caaacatat 219  Q
    |||||||||    
T  17912529 caaacatat 17912521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 55316336 - 55316443
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  55316336 aaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcata 55316435  T
Q  211 caaacata 218  Q
    ||||||||    
T  55316436 caaacata 55316443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 16821256 - 16821363
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    ||||||||||||| ||||||||  ||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16821256 aaattcaccaatttagcacaatactcatagcttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcata 16821355  T
Q  211 caaacata 218  Q
    ||||||||    
T  16821356 caaacata 16821363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 41270192 - 41270299
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||||| ||||||||||||| ||||||||||||||||| || ||||||||||||||||    
T  41270192 aaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaattccaccaacaatcatacaactaacatcaattcatgcata 41270291  T
Q  211 caaacata 218  Q
    ||||||||    
T  41270292 caaacata 41270299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 13975868 - 13975766
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    |||||||||||||||||||||| |||| |||||||||||||||| ||||| ||||||||||| |||||||||||||||||| |||| |||||||||||||    
T  13975868 aaattcaccaattgagcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcata 13975769  T
Q  211 caa 213  Q
    |||    
T  13975768 caa 13975766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 45860922 - 45861024
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    |||||||||||||||||||||| |||| |||||||||||||||| ||||| ||||||||||| |||||||||||||||||| |||| |||||||||||||    
T  45860922 aaattcaccaattgagcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcata 45861021  T
Q  211 caa 213  Q
    |||    
T  45861022 caa 45861024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 13955036 - 13954934
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    ||||||| |||||||||||||| |||| |||| ||||||||||| ||||| ||||||||||| |||||||||||||||||| |||| |||||||||||||    
T  13955036 aaattcatcaattgagcacaatattcataactgatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcata 13954937  T
Q  211 caa 213  Q
    |||    
T  13954936 caa 13954934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 2449370 - 2449277
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  2449370 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatat 2449277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 16744247 - 16744154
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| |||||||||||||||| || ||||||||| ||||||||||||||| |||| ||||||||||| ||||||||||||    
T  16744247 gcacaattttcataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacacttattatcaattcatggatacaaacatat 16744154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 208
Target Start/End: Original strand, 54651571 - 54651671
Alignment:
Q  109 caaaattcaccaattgagcacaattttcacaacttatcatttttacata-tttg-aacatgtaatttcaccaacaatcatacaattatcatcaattcatg 206  Q
    |||||||||||||||||| | ||||| || |||||| ||||| |||||| |||| |||||| ||||||||  ||||||||||||||||||||||||||||    
T  54651571 caaaattcaccaattgagtataattt-cataacttaacatttatacatactttgcaacatgcaatttcactcacaatcatacaattatcatcaattcatg 54651669  T
Q  207 ca 208  Q
    ||    
T  54651670 ca 54651671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 208
Target Start/End: Complemental strand, 11986323 - 11986216
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaa--catgtaatttcaccaacaatcatacaattatcatca 199  Q
    ||||||||||||||||| | ||||||||||||| || |||||  ||||  |||||| || ||  |||||||||||| | ||||||||||||||||||| |    
T  11986323 aacttagcaaaattcactatttgagcacaattt-cataacttgacattaatacatactttaaaacatgtaatttcaaccacaatcatacaattatcatta 11986225  T
Q  200 attcatgca 208  Q
    | |||||||    
T  11986224 aatcatgca 11986216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 219
Target Start/End: Complemental strand, 4145923 - 4145837
Alignment:
Q  134 ttcacaacttatcatttttacatatt-tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||  ||||||||| ||||| | |||||||||||||||| ||||||  || ||||||||| ||||||||| || |||||||||    
T  4145923 ttcacaatatatcattttcacatactatgaacatgtaatttcatcaacaacaattcaattatcaccaattcatgtattcaaacatat 4145837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 12902209 - 12902132
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  12902209 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 12902132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 18911130 - 18911207
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  18911130 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 18911207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 25058876 - 25058953
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  25058876 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 25058953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 49232573 - 49232650
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  49232573 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 49232650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 5228456 - 5228527
Alignment:
Q  139 aacttatcatttttacatatttg--aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    |||||| ||||| |||||||||   |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  5228456 aacttaacatttatacatattttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 5228527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 219
Target Start/End: Complemental strand, 6228735 - 6228648
Alignment:
Q  134 ttcacaacttatcatttttacatatt-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||  ||||||||| ||||| | |||||||||||||||||||||||  || ||||||||| ||| |||||| || |||||||||    
T  6228735 ttcacaatatatcattttcacatactatgaacatgtaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatat 6228648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 208
Target Start/End: Complemental strand, 12264905 - 12264834
Alignment:
Q  139 aacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  12264905 aacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 12264834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 15468428 - 15468382
Alignment:
Q  162 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  15468428 aacatgtaatttcacccacaaacataccataatcatcaattcatgca 15468382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 22275377 - 22275423
Alignment:
Q  162 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  22275377 aacatgtaatttcacccacaaacataccataatcatcaattcatgca 22275423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 34560061 - 34560123
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||    
T  34560061 tttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatat 34560123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 47784851 - 47784789
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||    
T  47784851 tttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatat 47784789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 3576522 - 3576461
Alignment:
Q  159 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    ||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||    
T  3576522 ttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatat 3576461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 219
Target Start/End: Complemental strand, 14814902 - 14814788
Alignment:
Q  106 tagcaaaattcaccaatt-gagcacaattttcacaacttatcatttttacatatt-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-tt 202  Q
    ||||| |||||| ||||| ||||||||||  |||||  ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| ||| ||    
T  14814902 tagcacaattcaacaatttgagcacaatt--cacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaattt 14814805  T
Q  203 catgcatacaaacatat 219  Q
    |||| || |||||||||    
T  14814804 catgtattcaaacatat 14814788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 9e-60; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 102 - 218
Target Start/End: Complemental strand, 6774402 - 6774286
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6774402 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 6774303  T
Q  202 tcatgcatacaaacata 218  Q
    |||||||||||||||||    
T  6774302 tcatgcatacaaacata 6774286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 102 - 218
Target Start/End: Original strand, 24549089 - 24549205
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24549089 aacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 24549188  T
Q  202 tcatgcatacaaacata 218  Q
    |||||||||||||||||    
T  24549189 tcatgcatacaaacata 24549205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 43373624 - 43373511
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43373624 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatataattatcatcaat 43373525  T
Q  202 tcatgcatacaaac 215  Q
    ||||||||||||||    
T  43373524 tcatgcatacaaac 43373511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 108 - 219
Target Start/End: Complemental strand, 16193866 - 16193755
Alignment:
Q  108 gcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16193866 gcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttccccaacaatcatacaattatcatcaattcatgc 16193767  T
Q  208 atacaaacatat 219  Q
    ||||||||||||    
T  16193766 atacaaacatat 16193755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 16405131 - 16405014
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| | | ||||||||||||||||||||||||||||||||||||||||||||||    
T  16405131 aacttagcaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 16405032  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  16405031 tcatgcatacaaacatat 16405014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 24928947 - 24928830
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||    
T  24928947 aacttagcgaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 24928848  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  24928847 tcatgcatacaaacatat 24928830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 21844707 - 21844600
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21844707 aaattcaccaattgagcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcata 21844608  T
Q  211 caaacata 218  Q
    ||||||||    
T  21844607 caaacata 21844600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 21852100 - 21851993
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  21852100 aaattcaccaattgagcacaatattcataacttatcatttttacatatttaaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcata 21852001  T
Q  211 caaacata 218  Q
    ||||||||    
T  21852000 caaacata 21851993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 102 - 218
Target Start/End: Original strand, 17345676 - 17345792
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||| || ||||||||||||||||||| |||||  |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  17345676 aacttagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaat 17345775  T
Q  202 tcatgcatacaaacata 218  Q
    ||||||||| |||||||    
T  17345776 tcatgcatataaacata 17345792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 30120839 - 30120946
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| || ||| ||||||||||||    
T  30120839 aaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcata 30120938  T
Q  211 caaacata 218  Q
    ||||||||    
T  30120939 caaacata 30120946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 16674527 - 16674420
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    ||||||||||||| |||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| || ||| ||||||||||||    
T  16674527 aaattcaccaattaagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcata 16674428  T
Q  211 caaacata 218  Q
     |||||||    
T  16674427 aaaacata 16674420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 5238218 - 5238311
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  5238218 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatat 5238311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 22907346 - 22907253
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  22907346 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatat 22907253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 24661380 - 24661287
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  24661380 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatat 24661287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 43685677 - 43685770
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  43685677 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatat 43685770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 222826 - 222754
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaat 183  Q
    ||||||||||||| |||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  222826 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 222754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 736449 - 736377
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaat 183  Q
    ||||||||||||| |||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  736449 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 736377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 860344 - 860272
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaat 183  Q
    ||||||||||||| |||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  860344 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 860272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 691967 - 691909
Alignment:
Q  125 agcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaat 183  Q
    |||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  691967 agcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 691909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 26011656 - 26011718
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||||||||||||||||||||  || ||||||||| ||| ||||||||| |||||||||    
T  26011656 tttgaacatgtaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatat 26011718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 13721047 - 13720970
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  13721047 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 13720970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 16873170 - 16873093
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  16873170 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 16873093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 22006377 - 22006300
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  22006377 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 22006300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 16195374 - 16195445
Alignment:
Q  139 aacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  16195374 aacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 16195445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 15933460 - 15933522
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||    
T  15933460 tttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatat 15933522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 219
Target Start/End: Original strand, 33172338 - 33172452
Alignment:
Q  106 tagcaaaattcaccaatt-gagcacaattttcacaacttatcatttttacatatt-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-tt 202  Q
    ||||| |||||| ||||| ||||||||||  |||||  ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| ||| ||    
T  33172338 tagcacaattcaacaattagagcacaatt--cacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaattt 33172435  T
Q  203 catgcatacaaacatat 219  Q
    |||| || |||||||||    
T  33172436 catgtattcaaacatat 33172452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 216
Target Start/End: Complemental strand, 37653726 - 37653642
Alignment:
Q  134 ttcacaacttatcatttttacatatt-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaaca 216  Q
    |||||||  ||||||||| ||||| | |||||||| ||||||| ||||||  || ||||||||| ||| ||||||||||||||||    
T  37653726 ttcacaatatatcattttcacatactatgaacatgcaatttcagcaacaacaattcaattatcaccaaattcatgcatacaaaca 37653642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 114; Significance: 5e-58; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 3738 - 3621
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3738 aacttagcaaaatttaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 3639  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  3638 tcatgcatacaaacatat 3621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 1231 - 1348
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1231 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattattatcaat 1330  T
Q  202 tcatgcatacaaacatat 219  Q
    |||||||||| |||||||    
T  1331 tcatgcatactaacatat 1348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 114; Significance: 5e-58; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 19313 - 19430
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19313 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaat 19412  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  19413 tcatgcatacaaacatat 19430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 21397 - 21514
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21397 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaat 21496  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  21497 tcatgcatacaaacatat 21514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 114; Significance: 5e-58; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 148828 - 148945
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  148828 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaat 148927  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  148928 tcatgcatacaaacatat 148945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 8956 - 9073
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8956 aacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaat 9055  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  9056 tcatgcatacaaacatat 9073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 53508 - 53570
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaat-tcatgcatacaaacatat 219  Q
    |||||||||| ||||||||||||||  || ||||||||| |||| |||||||| |||||||||    
T  53508 tttgaacatgcaatttcaccaacaacaattcaattatcaccaatatcatgcattcaaacatat 53570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 5e-58; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 18253991 - 18253874
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18253991 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 18253892  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  18253891 tcatgcatacaaacatat 18253874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 102 - 218
Target Start/End: Complemental strand, 16479106 - 16478990
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16479106 aacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 16479007  T
Q  202 tcatgcatacaaacata 218  Q
    |||||||||||||||||    
T  16479006 tcatgcatacaaacata 16478990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 102 - 218
Target Start/End: Complemental strand, 47481187 - 47481071
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  47481187 aacttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaat 47481088  T
Q  202 tcatgcatacaaacata 218  Q
    |||||||||||||||||    
T  47481087 tcatgcatacaaacata 47481071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 11580895 - 11580778
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||    
T  11580895 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 11580796  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  11580795 tcatgcatacaaacatat 11580778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 16211873 - 16211990
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||    
T  16211873 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgcaatttcacaaacaatcttacaattatcatcaat 16211972  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  16211973 tcatgcatacaaacatat 16211990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 36052771 - 36052884
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  36052771 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaattttaccaacaatcatataattatcatcaat 36052870  T
Q  202 tcatgcatacaaac 215  Q
    ||||||||||||||    
T  36052871 tcatgcatacaaac 36052884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 13037170 - 13037053
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||| ||||||| |||||||||||||||||||||||||    
T  13037170 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgcaatttcatcaacaatcatacaattatcatcaat 13037071  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  13037070 tcatgcatacaaacatat 13037053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 13572793 - 13572900
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  13572793 aaattcaccaattgagcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcata 13572892  T
Q  211 caaacata 218  Q
    ||||||||    
T  13572893 caaacata 13572900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 10989526 - 10989633
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  10989526 aaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcata 10989625  T
Q  211 caaacata 218  Q
    ||||||||    
T  10989626 caaacata 10989633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 13911159 - 13911052
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    |||||||||||||||||| ||| |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13911159 aaattcaccaattgagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaattaacatcaattcatgcata 13911060  T
Q  211 caaacata 218  Q
    ||||||||    
T  13911059 caaacata 13911052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 3060073 - 3060190
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||| |||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||    
T  3060073 aacttaacaaaattcaccatttgagcataattttcacaatttatcatttttacatatttgaacatgtaatttcaccaacagtattacaattatcatcaat 3060172  T
Q  202 tcatgcatacaaacatat 219  Q
    | ||||||||||| ||||    
T  3060173 taatgcatacaaatatat 3060190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 110 - 218
Target Start/End: Original strand, 2437573 - 2437681
Alignment:
Q  110 aaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcat 209  Q
    |||||||||||||||| |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| || |||||||||||||||    
T  2437573 aaaattcaccaattgaacacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcat 2437672  T
Q  210 acaaacata 218  Q
    |||||||||    
T  2437673 acaaacata 2437681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 102 - 218
Target Start/End: Original strand, 13321122 - 13321239
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatca 199  Q
    ||||||||||||||||||||||||||||||||| || |||||  ||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  13321122 aacttagcaaaattcaccaattgagcacaattt-cataacttgacatttatacatactttgaaacatgtaatttcaccaacaatcatacaattatcatca 13321220  T
Q  200 attcatgcatacaaacata 218  Q
    |||||||||||||||||||    
T  13321221 attcatgcatacaaacata 13321239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 25292484 - 25292377
Alignment:
Q  112 aattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac 211  Q
    ||||||||||||||||||||| |||| | |||||| ||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||| |||||    
T  25292484 aattcaccaattgagcacaatattcatagcttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatac 25292385  T
Q  212 aaacatat 219  Q
    ||||||||    
T  25292384 aaacatat 25292377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 11516358 - 11516451
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  11516358 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatat 11516451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 15441696 - 15441603
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  15441696 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatat 15441603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 30262261 - 30262168
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  30262261 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatat 30262168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 7293147 - 7293240
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| || |||||||||||||||||||||    
T  7293147 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattattaattcatgcatacaaacatat 7293240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 218
Target Start/End: Complemental strand, 296119 - 296006
Alignment:
Q  105 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 204  Q
    |||||||||||||||| |||   | |||||| | ||||| ||||||||||||| || |||||| |||||||||||||||||||  ||||||||| |||||    
T  296119 ttagcaaaattcaccatttggatataatttttataacttctcatttttacataattcaacatgaaatttcaccaacaatcataacattatcatcgattca 296020  T
Q  205 tgcatacaaacata 218  Q
    |||| |||||||||    
T  296019 tgcacacaaacata 296006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 16915013 - 16914951
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||||| ||||||||||||||  || ||||||||||||| ||||||||| |||||||||    
T  16915013 tttgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatat 16914951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 48622758 - 48622708
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    |||||||||||||||||||| |||| ||||| || ||||||||||||||||    
T  48622758 tttgaacatgtaatttcacccacaaacataccataatcatcaattcatgca 48622708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 13758507 - 13758584
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  13758507 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 13758584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 15927705 - 15927782
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  15927705 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaagcataccataatcatcaattcatgca 15927782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 15950910 - 15950833
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  15950910 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 15950833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 18980140 - 18980063
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  18980140 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 18980063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 14935497 - 14935584
Alignment:
Q  134 ttcacaacttatcatttttacatatt-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||  ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||    
T  14935497 ttcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatat 14935584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 15358934 - 15359021
Alignment:
Q  134 ttcacaacttatcatttttacatatt-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||  ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||    
T  15358934 ttcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatat 15359021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 15363090 - 15363177
Alignment:
Q  134 ttcacaacttatcatttttacatatt-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||  ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||    
T  15363090 ttcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatat 15363177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 28722247 - 28722334
Alignment:
Q  134 ttcacaacttatcatttttacatatt-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||  ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||    
T  28722247 ttcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatat 28722334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 9611470 - 9611532
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||    
T  9611470 tttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatat 9611532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 9839041 - 9839103
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||    
T  9839041 tttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatat 9839103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 14272000 - 14271922
Alignment:
Q  143 tatcatttttacata-tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    ||||||||| ||||| |||||||||| ||||||||||||||  ||  |||||||| ||| ||||||||| |||||||||    
T  14272000 tatcattttcacatactttgaacatgcaatttcaccaacaacaattgaattatcaacaatttcatgcattcaaacatat 14271922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 48356806 - 48356868
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||    
T  48356806 tttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatat 48356868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 13377691 - 13377752
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacata 218  Q
    |||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| ||||||||    
T  13377691 tttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacata 13377752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 13448937 - 13448868
Alignment:
Q  134 ttcacaacttatcatttttacatatt-tgaacatgtaatttcaccaacaatcatacaattatcatcaatt 202  Q
    |||||||  ||||||||| ||||| | |||||||| ||||||||||||||| || ||||||||| |||||    
T  13448937 ttcacaatatatcattttcacatactatgaacatgcaatttcaccaacaataattcaattatcaccaatt 13448868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 14251017 - 14250940
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| | || ||||| || ||||||||||||||||    
T  14251017 tttcataacttaacatttatacatactttgaaacatgtaatttcacccaaaaacataccataatcatcaattcatgca 14250940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 15760233 - 15760156
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||  || ||||||||||||||||    
T  15760233 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacatatcataatcatcaattcatgca 15760156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 49047759 - 49047699
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacat 217  Q
    |||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||    
T  49047759 tttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacat 49047699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 114; Significance: 5e-58; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 121996 - 122113
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  121996 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaat 122095  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  122096 tcatgcatacaaacatat 122113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 10104406 - 10104289
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10104406 aacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaat 10104307  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  10104306 tcatgcatacaaacatat 10104289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 15675245 - 15675128
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15675245 aacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaat 15675146  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  15675145 tcatgcatacaaacatat 15675128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 13246537 - 13246654
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||| |||    
T  13246537 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcattaat 13246636  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  13246637 tcatgcatacaaacatat 13246654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 54118400 - 54118283
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||    
T  54118400 aacttagcaaaattcaccaattgagcacaattttcacaacttatcaattgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 54118301  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  54118300 tcatgcatacaaacatat 54118283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 31115736 - 31115853
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||| ||||||||||||||||||| ||||||||||||||  |||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  31115736 aacttaggaaaattcaccaattgagcataattttcacaacttcacatttttacataatggaacatgtaatttcaccaacaatcatacaattatcatcaat 31115835  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  31115836 tcatgcatacaaacatat 31115853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 10644336 - 10644443
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    ||||||||||||| ||||||||  ||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10644336 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcata 10644435  T
Q  211 caaacata 218  Q
    ||||||||    
T  10644436 caaacata 10644443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 13048368 - 13048260
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    ||||||| |||||||||||||| |||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||    
T  13048368 aaattcatcaattgagcacaatattcataacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcata 13048269  T
Q  211 caaacatat 219  Q
    |||||||||    
T  13048268 caaacatat 13048260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 26680331 - 26680424
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  26680331 gcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatat 26680424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 47357771 - 47357878
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    ||||||||||||| |||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || ||||||| ||||||||    
T  47357771 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaatccatgcata 47357870  T
Q  211 caaacata 218  Q
    ||||||||    
T  47357871 caaacata 47357878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 10488693 - 10488786
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  10488693 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatat 10488786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 16328058 - 16327965
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  16328058 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatat 16327965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 102 - 218
Target Start/End: Complemental strand, 40885710 - 40885594
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacata-tttgaacatgtaatttcaccaacaatcatacaattatcatcaa 200  Q
    ||||||||||| ||||||||||||||| ||||| || |||||  ||||| |||||| ||||||||||||||||||||||||| ||| ||||||||| |||    
T  40885710 aacttagcaaagttcaccaattgagcataattt-cataacttgacatttatacatactttgaacatgtaatttcaccaacaaacattcaattatcaccaa 40885612  T
Q  201 ttcatgcatacaaacata 218  Q
    ||||||||||||||||||    
T  40885611 ttcatgcatacaaacata 40885594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 218
Target Start/End: Original strand, 7850107 - 7850223
Alignment:
Q  103 acttagcaaaatt-caccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||| || || |||||||||||||||| |||||  |||||| ||||| ||| ||||  |||| |||||||||||| ||| || ||||||||    
T  7850107 acttagcaaaatttcatcacttgagcacaattttcataacttcacattttcacataattggacatacaattccaccaacaatcacacagttttcatcaat 7850206  T
Q  202 tcatgcatacaaacata 218  Q
     ||| ||| ||||||||    
T  7850207 acattcattcaaacata 7850223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 109 - 206
Target Start/End: Complemental strand, 17145799 - 17145701
Alignment:
Q  109 caaaattcaccaattgagcacaattttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatg 206  Q
    |||||||||| ||||||| | ||||| ||||||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||    
T  17145799 caaaattcactaattgagtataattt-cacaacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatg 17145701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 22738406 - 22738483
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    |||||||||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  22738406 tttcacaacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 22738483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 208
Target Start/End: Original strand, 8374623 - 8374722
Alignment:
Q  110 aaaattcaccaattgagcacaattttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgc 207  Q
    ||||||||| ||||||| | ||||| || |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || |||||||||||||||    
T  8374623 aaaattcactaattgagtataattt-cataacttaacatttatacatactttgaagcatgtaatttcacccacaaacataccataatcatcaattcatgc 8374721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 7132184 - 7132107
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  7132184 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 7132107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 18169107 - 18169184
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  18169107 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 18169184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 19020623 - 19020700
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  19020623 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 19020700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 33240890 - 33240924
Alignment:
Q  185 atacaattatcatcaattcatgcatacaaacatat 219  Q
    ||||||| |||||||||||||||||||||||||||    
T  33240890 atacaatcatcatcaattcatgcatacaaacatat 33240924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 15044990 - 15045051
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacata 218  Q
    |||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| ||||||||    
T  15044990 tttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacata 15045051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 15109434 - 15109373
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacata 218  Q
    |||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| ||||||||    
T  15109434 tttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacata 15109373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 219
Target Start/End: Complemental strand, 18238294 - 18238180
Alignment:
Q  106 tagcaaaattcaccaatt-gagcacaattttcacaacttatcatttttacatatt-tgaacatgtaatttcaccaacaatcatacaattatcatcaat-t 202  Q
    ||||| |||||| ||||| ||||||||||  |||||  ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| |||| |    
T  18238294 tagcacaattcaacaattagagcacaatt--cacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatat 18238197  T
Q  203 catgcatacaaacatat 219  Q
    |||| || |||||||||    
T  18238196 catgtattcaaacatat 18238180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 20000860 - 20000937
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| | || ||||| || ||||||||||||||||    
T  20000860 tttcataacttaacatttatacatactttgaaacatgtaatttcacccagaaacataccataatcatcaattcatgca 20000937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 38764873 - 38764933
Alignment:
Q  160 tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||||||||||||||||||  || ||||||||| ||| ||||| ||| |||||||||    
T  38764873 tgaacatgtaatttcaccaacaacaattcaattatcaccaatttcattcattcaaacatat 38764933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 5e-58; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 45051530 - 45051643
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45051530 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 45051629  T
Q  202 tcatgcatacaaac 215  Q
    ||||||||||||||    
T  45051630 tcatgcatacaaac 45051643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 102 - 218
Target Start/End: Original strand, 2116362 - 2116478
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2116362 aacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 2116461  T
Q  202 tcatgcatacaaacata 218  Q
    |||||||||||||||||    
T  2116462 tcatgcatacaaacata 2116478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 41394329 - 41394446
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41394329 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaacttcaccaacaatcatacaattatcatcaat 41394428  T
Q  202 tcatgcatacaaacatat 219  Q
    | ||||||||||||||||    
T  41394429 ttatgcatacaaacatat 41394446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 20893782 - 20893665
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||| |||||||||||||||||||||||||    
T  20893782 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaacaacaatcatacaattatcatcaat 20893683  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  20893682 tcatgcatacaaacatat 20893665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 20913137 - 20913254
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  20913137 aactttgcaaaattcaccaattgagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaat 20913236  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  20913237 tcatgcatacaaacatat 20913254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 105 - 219
Target Start/End: Original strand, 20931455 - 20931569
Alignment:
Q  105 ttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattca 204  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  20931455 ttagcaaaattcaccaatttagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattca 20931554  T
Q  205 tgcatacaaacatat 219  Q
    |||||||||||||||    
T  20931555 tgcatacaaacatat 20931569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 20445786 - 20445903
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| | | || |||||||||||||||||||||||||||||||||||||||||||    
T  20445786 aacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattatcatcaat 20445885  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  20445886 tcatgcatacaaacatat 20445903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 20531551 - 20531668
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| | | || |||||||||||||||||||||||||||||||||||||||||||    
T  20531551 aacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattatcatcaat 20531650  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  20531651 tcatgcatacaaacatat 20531668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 102 - 208
Target Start/End: Original strand, 22227916 - 22228022
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||| ||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22227916 aacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaat 22228015  T
Q  202 tcatgca 208  Q
    |||||||    
T  22228016 tcatgca 22228022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 102 - 208
Target Start/End: Original strand, 22232613 - 22232719
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||| ||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22232613 aacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaat 22232712  T
Q  202 tcatgca 208  Q
    |||||||    
T  22232713 tcatgca 22232719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 18601253 - 18601146
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  18601253 aaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcata 18601154  T
Q  211 caaacata 218  Q
    ||||||||    
T  18601153 caaacata 18601146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 5072523 - 5072416
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  5072523 aaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcata 5072424  T
Q  211 caaacata 218  Q
     |||||||    
T  5072423 taaacata 5072416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 37844607 - 37844489
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaactt-atcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaa 200  Q
    ||||||||||||||||  ||||||||||||||||||| | || ||||||| | | || ||||||||||||||||||||||||||||||||||||||||||    
T  37844607 aacttagcaaaattcattaattgagcacaattttcactattttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattatcatcaa 37844508  T
Q  201 ttcatgcatacaaacatat 219  Q
    |||||||||||||||||||    
T  37844507 ttcatgcatacaaacatat 37844489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 51452623 - 51452716
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  51452623 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatat 51452716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 17148704 - 17148781
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  17148704 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 17148781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 41394228 - 41394259
Alignment:
Q  1 caatccatgaatatgcatacccaatcagtgat 32  Q
    ||||||||||||||||||||||||||||||||    
T  41394228 caatccatgaatatgcatacccaatcagtgat 41394259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 18059877 - 18059800
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| | || ||||| || ||||||||||||||||    
T  18059877 tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcatgca 18059800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 102 - 218
Target Start/End: Complemental strand, 13469 - 13353
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13469 aacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 13370  T
Q  202 tcatgcatacaaacata 218  Q
    |||||||||||||||||    
T  13369 tcatgcatacaaacata 13353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 113; Significance: 2e-57; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 102 - 218
Target Start/End: Complemental strand, 9493 - 9377
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9493 aacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 9394  T
Q  202 tcatgcatacaaacata 218  Q
    |||||||||||||||||    
T  9393 tcatgcatacaaacata 9377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 102 - 218
Target Start/End: Complemental strand, 16391 - 16275
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16391 aacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 16292  T
Q  202 tcatgcatacaaacata 218  Q
    |||||||||||||||||    
T  16291 tcatgcatacaaacata 16275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 1112 - 995
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1112 aacttagcaaaattcatcaattgagcacaattttcacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 1013  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  1012 tcatgcatacaaacatat 995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 48294 - 48411
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  48294 aacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 48393  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  48394 tcatgcatacaaacatat 48411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 1e-55; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 1650249 - 1650136
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1650249 aacttagcaaaattcaccaattgagcacaattttcacaacttatcattcttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 1650150  T
Q  202 tcatgcatacaaac 215  Q
    ||||||||||||||    
T  1650149 tcatgcatacaaac 1650136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 23153554 - 23153671
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||    
T  23153554 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 23153653  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  23153654 tcatgcatacaaacatat 23153671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 102 - 218
Target Start/End: Complemental strand, 14626274 - 14626158
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||| |||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14626274 aacttagcataattcaccaattgcacacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 14626175  T
Q  202 tcatgcatacaaacata 218  Q
    |||||||||||||||||    
T  14626174 tcatgcatacaaacata 14626158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 106 - 215
Target Start/End: Complemental strand, 35009591 - 35009482
Alignment:
Q  106 tagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcat 205  Q
    |||||||||||||||||||||||||||||||| |||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  35009591 tagcaaaattcaccaattgagcacaattttcaaaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcat 35009492  T
Q  206 gcatacaaac 215  Q
    ||||||||||    
T  35009491 gcatacaaac 35009482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 102 - 218
Target Start/End: Complemental strand, 1657904 - 1657788
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||| || ||||||||||||||||||| |||||  |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  1657904 aacttagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaat 1657805  T
Q  202 tcatgcatacaaacata 218  Q
    |||||||| ||||||||    
T  1657804 tcatgcatccaaacata 1657788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 102 - 218
Target Start/End: Original strand, 15862578 - 15862694
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||| || ||||||||||||||||||| |||||  ||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  15862578 aacttagcaaaatccatcaattgagcacaattttcataacttcacatttatacataattgaacatgtgatttcaccaacaatcatacaattatcatcaat 15862677  T
Q  202 tcatgcatacaaacata 218  Q
    |||||||||||||||||    
T  15862678 tcatgcatacaaacata 15862694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 25175680 - 25175787
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    ||||||||||||| |||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||    
T  25175680 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 25175779  T
Q  211 caaacata 218  Q
    ||||||||    
T  25175780 caaacata 25175787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 27654118 - 27654011
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    ||||||||||||| |||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||    
T  27654118 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 27654019  T
Q  211 caaacata 218  Q
    ||| ||||    
T  27654018 caagcata 27654011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 16825889 - 16825780
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatca--tacaattatcatcaattcatgca 208  Q
    |||| |||||||| |||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||||| |  ||||| || ||||||||||||||    
T  16825889 aaatccaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattaattacaactaacatcaattcatgca 16825790  T
Q  209 tacaaacata 218  Q
    ||||||||||    
T  16825789 tacaaacata 16825780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 29665980 - 29666089
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatca 199  Q
    ||||||||||||||||||||||||| ||||||| || |||||  ||||| | |||| |||||| |||||||||||||| |||||||||||||||||||||    
T  29665980 aacttagcaaaattcaccaattgagtacaattt-cataacttgacatttatgcatactttgaaacatgtaatttcacccacaatcatacaattatcatca 29666078  T
Q  200 attcatgcata 210  Q
    |||||| ||||    
T  29666079 attcatacata 29666089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 27751603 - 27751648
Alignment:
Q  173 tcaccaacaatcatacaattatcatcaattcatgcatacaaacata 218  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  27751603 tcaccaacaatcatacaattgtcatcaattcatgcatacaaacata 27751648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 29605614 - 29605673
Alignment:
Q  160 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||||||||||||||  || |||||||||  ||||||||||| |||||||||    
T  29605614 tgaacatgtaatttcaccaacaacaattcaattatcactaattcatgcattcaaacatat 29605673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 18629693 - 18629631
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||||| ||||||||||||||  || ||||||||||||| ||||||||| |||||||||    
T  18629693 tttgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatat 18629631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 1556142 - 1556219
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  1556142 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 1556219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 16232029 - 16232106
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  16232029 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 16232106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 17083298 - 17083221
Alignment:
Q  143 tatcatttttacatatt-tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    ||||||||| ||||| | |||||||  ||||||||||||||  || ||||||||| |||||||||||| |||||||||    
T  17083298 tatcattttcacatactatgaacatacaatttcaccaacaacaattcaattatcaccaattcatgcattcaaacatat 17083221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 18086942 - 18086865
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  18086942 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 18086865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 23977906 - 23977983
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  23977906 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 23977983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 27740946 - 27741021
Alignment:
Q  103 acttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatattt--gaacatgtaatttcacc 177  Q
    ||||||||||||||||||||||||||||| ||||| |||||  ||||| |||||| ||   ||||||||||||||||    
T  27740946 acttagcaaaattcaccaattgagcacaa-tttcataacttgacatttatacatacttcgaaacatgtaatttcacc 27741021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 16887877 - 16887815
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||||| || |||||||||||   | ||||||||||||| |||||||||||||||||||    
T  16887877 tttgaacatgcaaattcaccaacaacagttcaattatcatcaatttcatgcatacaaacatat 16887815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 25651399 - 25651461
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||    
T  25651399 tttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatat 25651461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 13620913 - 13620836
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||| ||||||||| |||| ||||| || ||||||||||||||||    
T  13620913 tttcataacttaacatttatacatactttgaaacatgcaatttcacccacaaacataccataatcatcaattcatgca 13620836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 22225857 - 22225780
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| | || ||||| || ||||||||||||||||    
T  22225857 tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcatgca 22225780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 6220 - 6103
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6220 aacttagcaaaattcaccaattcagcacaatttttacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 6121  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  6120 tcatgcatacaaacatat 6103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 37069 - 36952
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  37069 aacttagcaaaattcaccaatttagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaagcttacaattatcatcaat 36970  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  36969 tcatgcatacaaacatat 36952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 106; Significance: 3e-53; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 48705 - 48822
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  48705 aacttagcaaaattcaccaactgagcacaattttcacaacttatcattttttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 48804  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  48805 tcatgcatacaaacatat 48822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 36210 - 36317
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    ||||||||||||| |||||||| |||| |||||||||||||| ||||| |||| |||||||||||||||||||||||||| || ||||||||||| ||||    
T  36210 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatacata 36309  T
Q  211 caaacata 218  Q
    ||||||||    
T  36310 caaacata 36317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 154126 - 154049
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| ||||||| |||||| |||| ||||| || ||||||||||||||||    
T  154126 tttcataacttaacatttatacatactttgaaacatgtaacttcacccacaaacataccataatcatcaattcatgca 154049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 123320 - 123203
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||    
T  123320 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 123221  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  123220 tcatgcatacaaacatat 123203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 3e-53; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 462845 - 462962
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  462845 aacttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaat 462944  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||| ||||    
T  462945 tcatgcatacaaatatat 462962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 8891349 - 8891466
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||| ||||||||||||||||||||||||||    
T  8891349 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcgccaacaatcatacaattatcatcaat 8891448  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  8891449 tcatgcatacaaacatat 8891466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 19794860 - 19794743
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  19794860 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattattatcaat 19794761  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  19794760 tcatgcatacaaacatat 19794743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 20627469 - 20627352
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20627469 aacttaacaaaattcaccaattgagcacaattttcacaagttatcatttttacatatttggacatgtaatttcaccaacaatcatacaattatcatcaat 20627370  T
Q  202 tcatgcatacaaacatat 219  Q
    || |||||||||||||||    
T  20627369 tcgtgcatacaaacatat 20627352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 24341545 - 24341428
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  24341545 aacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatataatttcaccaacaatcatacaattatcatcaat 24341446  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  24341445 tcatgcatacaaacatat 24341428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 36982597 - 36982480
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  36982597 aacttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccagcaatcttacaattatcatcaat 36982498  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||| ||||||||||||    
T  36982497 tcatgaatacaaacatat 36982480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 106 - 218
Target Start/End: Complemental strand, 25265542 - 25265430
Alignment:
Q  106 tagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcat 205  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25265542 tagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcat 25265443  T
Q  206 gcatacaaacata 218  Q
    |||||||||||||    
T  25265442 gcatacaaacata 25265430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 110 - 219
Target Start/End: Complemental strand, 43643105 - 43642996
Alignment:
Q  110 aaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcat 209  Q
    ||||||||||||||||||||||||||||||||||| ||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43643105 aaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcat 43643006  T
Q  210 acaaacatat 219  Q
    ||||||||||    
T  43643005 acaaacatat 43642996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 102 - 208
Target Start/End: Complemental strand, 7508000 - 7507894
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7508000 aacttagccaaattcaccaattgaacacaattttcataacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 7507901  T
Q  202 tcatgca 208  Q
    |||||||    
T  7507900 tcatgca 7507894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 17396799 - 17396697
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    |||||||||||||||||||||| |||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||||||||||    
T  17396799 aaattcaccaattgagcacaatattcataacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcata 17396700  T
Q  211 caa 213  Q
    |||    
T  17396699 caa 17396697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 19689533 - 19689440
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  19689533 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatat 19689440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 23820202 - 23820295
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  23820202 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatat 23820295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 19886796 - 19886689
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    |||||||||| || |||||||| |||| ||||||||| |||| ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||    
T  19886796 aaattcaccactttagcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 19886697  T
Q  211 caaacata 218  Q
    ||||||||    
T  19886696 caaacata 19886689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 14906572 - 14906479
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  14906572 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatat 14906479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 20015142 - 20015235
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| ||||||||||| |||||||| |||||||||||||| |||||||||    
T  20015142 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaattattatcaattcatgcatgcaaacatat 20015235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 3798722 - 3798645
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  3798722 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 3798645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 12635987 - 12635910
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  12635987 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 12635910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 12728529 - 12728606
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  12728529 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 12728606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 34824612 - 34824689
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  34824612 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 34824689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 19669191 - 19669132
Alignment:
Q  161 gaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    ||||||| ||||||||||||||  |  ||||||||||||| |||||||||||||||||||    
T  19669191 gaacatgcaatttcaccaacaacaactcaattatcatcaatttcatgcatacaaacatat 19669132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 210
Target Start/End: Complemental strand, 23778164 - 23778085
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||| | |||| ||||| || ||||||||||||||||||    
T  23778164 tttcataacttaacatttatacatactttgaaacatgtaatttcatccacaaacataccataatcatcaattcatgcata 23778085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 24884848 - 24884910
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaatt-catgcatacaaacatat 219  Q
    |||||||||| ||||||||||||||  || ||||||||| ||||| ||||||| |||||||||    
T  24884848 tttgaacatgcaatttcaccaacaacaattcaattatcaccaattccatgcattcaaacatat 24884910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 68154 - 68215
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacata 218  Q
    |||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| ||||||||    
T  68154 tttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacata 68215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 8943983 - 8944060
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| ||||  |||| || ||||||||||||||||    
T  8943983 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaatataccataatcatcaattcatgca 8944060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 12641761 - 12641684
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||| | |||| ||||| || ||||||||||||||||    
T  12641761 tttcataacttaacatttatacatactttgaaacatgtaatttcagccacaaacataccataatcatcaattcatgca 12641684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 16935730 - 16935807
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||  |||| ||||| || ||||||||||||||||    
T  16935730 tttcataacttaacatttatacatactttgaaacatgtaatttcacgcacaaacataccataatcatcaattcatgca 16935807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 17006390 - 17006467
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||  |||| ||||| || ||||||||||||||||    
T  17006390 tttcataacttaacatttatacatactttgaaacatgtaatttcacgcacaaacataccataatcatcaattcatgca 17006467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 42178088 - 42178011
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| | || ||||| || ||||||||||||||||    
T  42178088 tttcataacttaacatttatacatactttgaaacatgtaatttcacccaaaaacataccataatcatcaattcatgca 42178011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 19660044 - 19660104
Alignment:
Q  160 tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||| ||||||||||||||| || ||||||||| ||| |||||| |||| |||||||    
T  19660044 tgaacatgcaatttcaccaacaataattcaattatcaccaatttcatgtatacgaacatat 19660104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 5217 - 5100
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  5217 aactttgcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaacaatcttacaattatcatcaat 5118  T
Q  202 tcatgcatacaaacatat 219  Q
    ||| ||||||||||||||    
T  5117 tcacgcatacaaacatat 5100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 102; Significance: 8e-51; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 107854 - 107971
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  107854 aacttatcaaaattcaccaattgagcacaatttttacaacttatcatttttgcacatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 107953  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  107954 tcatgcatacaaacatat 107971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 111 - 201
Target Start/End: Complemental strand, 64663 - 64573
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  64663 aaattcaccaattgagcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaat 64573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 102 - 218
Target Start/End: Original strand, 3070 - 3186
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3070 aacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaat 3169  T
Q  202 tcatgcatacaaacata 218  Q
    ||||| |||||||||||    
T  3170 tcatggatacaaacata 3186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 690 - 573
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||    
T  690 aacttagcaaaattcaccaattgagtacaattttcacaactcatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 591  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  590 tcatgcatacaaacatat 573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 12220 - 12337
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||    
T  12220 aacttaacaaaattcaccaatttagcacaattttcacaacttatcatttttacacatttaaacatgtattttcaccaacaatcatacaattatcatcaat 12319  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  12320 tcatgcatacaaacatat 12337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 26571 - 26454
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  26571 aacttagcaaaattcaccaattgagaacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaataatcttacaattatcatcaat 26472  T
Q  202 tcatgcatacaaacatat 219  Q
    ||| ||||||||||||||    
T  26471 tcacgcatacaaacatat 26454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 106 - 218
Target Start/End: Complemental strand, 8332 - 8220
Alignment:
Q  106 tagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcat 205  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||    
T  8332 tagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacctgtaatttcaccaacaatcatacaattatcaccaattcat 8233  T
Q  206 gcatacaaacata 218  Q
    |||||||||||||    
T  8232 gcatacaaacata 8220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 41836 - 41953
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||   |||||||||||||||    
T  41836 aacttagcaaaattcaccaattgagcacaattttcacaaattatcatttttacatatttgagcatgtaatttcaccaacaatatgacaattatcatcaat 41935  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  41936 tcatgcatacaaacatat 41953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 102 - 218
Target Start/End: Original strand, 8985 - 9101
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||    
T  8985 aacttaacaaaattcaccaattgagcacaattttcacaacttaacatttttacataattgaacatgtaatttcaccaacaatcttacaattatcatcgat 9084  T
Q  202 tcatgcatacaaacata 218  Q
    |||||||||||||||||    
T  9085 tcatgcatacaaacata 9101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 13617 - 13729
Alignment:
Q  106 tagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcat 205  Q
    |||||||||||| |||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  13617 tagcaaaattcatcaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcat 13716  T
Q  206 gcatacaaacata 218  Q
    |||||||||||||    
T  13717 gcatacaaacata 13729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 41759 - 41871
Alignment:
Q  106 tagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcat 205  Q
    |||||||||||||||||||| |||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41759 tagcaaaattcaccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcat 41858  T
Q  206 gcatacaaacata 218  Q
    |||||||||||||    
T  41859 gcatacaaacata 41871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 51328 - 51221
Alignment:
Q  112 aattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatac 211  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  51328 aattcaccaattgagcacaattttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatac 51229  T
Q  212 aaacatat 219  Q
    ||| ||||    
T  51228 aaatatat 51221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 102 - 208
Target Start/End: Complemental strand, 5360 - 5254
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5360 aactcagcaaaattcaccaattgaacacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 5261  T
Q  202 tcatgca 208  Q
    |||||||    
T  5260 tcatgca 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 94; Significance: 5e-46; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 172012 - 172129
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| | | ||||||||||||||||||||||| ||||||||||||||||||||||    
T  172012 aacttagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaat 172111  T
Q  202 tcatgcatacaaacatat 219  Q
    |||| |||||||||||||    
T  172112 tcatccatacaaacatat 172129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 177715 - 177832
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| | | ||||||||||||||||||||||| ||||||||||||||||||||||    
T  177715 aacttagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaat 177814  T
Q  202 tcatgcatacaaacatat 219  Q
    |||| |||||||||||||    
T  177815 tcatccatacaaacatat 177832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 247598 - 247481
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| | | |||||||||||| |||||||||  ||||||||||||||||||||||    
T  247598 aacttagcaaaatttaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgaaatttcaccctcaatcatacaattatcatcaat 247499  T
Q  202 tcatgcatacaaacatat 219  Q
    ||||||||||||||||||    
T  247498 tcatgcatacaaacatat 247481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 208
Target Start/End: Complemental strand, 34276 - 34200
Alignment:
Q  134 ttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    |||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  34276 ttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 34200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 272132 - 272249
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| | | ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  272132 aacttagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttctccatcaatcatacaattatcatcaat 272231  T
Q  202 tcatgcatacaaacatat 219  Q
    |||| |||||||||||||    
T  272232 tcattcatacaaacatat 272249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 102 - 218
Target Start/End: Complemental strand, 14205 - 14089
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||    
T  14205 aacttaggaaaattcaccaattgagcacaatcttcataacttatcatttttacatatttcaacatgtaatttcactaacaatcatataattatcatcaat 14106  T
Q  202 tcatgcatacaaacata 218  Q
    ||||||||||| |||||    
T  14105 tcatgcatacagacata 14089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 102 - 218
Target Start/End: Complemental strand, 21260 - 21144
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    ||||||| |||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  21260 aacttaggaaaattcaccaattgagctcaatcttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatataattatcatcaat 21161  T
Q  202 tcatgcatacaaacata 218  Q
    | ||| |||||||||||    
T  21160 taatggatacaaacata 21144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 102 - 218
Target Start/End: Complemental strand, 34616 - 34500
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaat 201  Q
    |||||||||||||||||| |||||| ||||||||||||||||   ||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  34616 aacttagcaaaattcacctattgagaacaattttcacaacttcatatttttacacaattgaacatgtaatttcaccaacaatcatacaattatcatcaat 34517  T
Q  202 tcatgcatacaaacata 218  Q
    |||||||||||||||||    
T  34516 tcatgcatacaaacata 34500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 89605 - 89493
Alignment:
Q  107 agcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatg 206  Q
    |||| |||||||||||||||||||||||||||||||||| |||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  89605 agcataattcaccaattgagcacaattttcacaacttataatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatg 89506  T
Q  207 catacaaacatat 219  Q
    |||||||| ||||    
T  89505 catacaaatatat 89493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 5645 - 5752
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    |||||||||||||||||||||| ||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5645 aaattcaccaattgagcacaatattcatgacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcata 5744  T
Q  211 caaacata 218  Q
    ||||||||    
T  5745 caaacata 5752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 152 - 259
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    |||||||||||||||||||||| | || |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  152 aaattcaccaattgagcacaatatacataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcata 251  T
Q  211 caaacata 218  Q
    ||||||||    
T  252 caaacata 259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 43114 - 43221
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    ||||||||||||| |||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43114 aaattcaccaatttagcacaatcttcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 43213  T
Q  211 caaacata 218  Q
     |||||||    
T  43214 gaaacata 43221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 87; Significance: 7e-42; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 109 - 219
Target Start/End: Complemental strand, 128318 - 128208
Alignment:
Q  109 caaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    |||||||| ||||||||||||||||||||||||||| ||  |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  128318 caaaattcgccaattgagcacaattttcacaacttaacacctttacacatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgca 128219  T
Q  209 tacaaacatat 219  Q
    |||||||||||    
T  128218 tacaaacatat 128208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 31810 - 31703
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    |||||||||||||||||| ||| |||| |||||||||||||| ||||| |||| |||||||||||||||||||||||||| || |||||||||||||||     
T  31810 aaattcaccaattgagcataatattcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatgcatt 31711  T
Q  211 caaacata 218  Q
    ||||||||    
T  31710 caaacata 31703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 84; Significance: 4e-40; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 1439 - 1332
Alignment:
Q  111 aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 210  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  1439 aaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcata 1340  T
Q  211 caaacata 218  Q
    ||||||||    
T  1339 caaacata 1332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 84; Significance: 4e-40; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 102 - 208
Target Start/End: Original strand, 3829 - 3936
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttt-tacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaa 200  Q
    |||||||||||||||||||||||  |||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3829 aacttagcaaaattcaccaattggacacaatttccataacttatcattttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaa 3928  T
Q  201 ttcatgca 208  Q
    ||||||||    
T  3929 ttcatgca 3936  T

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Target: scaffold0141 (Bit Score: 66; Significance: 2e-29; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 22671 - 22764
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  22671 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatat 22764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 26926 - 27019
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  26926 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatat 27019  T

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Target: scaffold0124 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 1714 - 1621
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  1714 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatat 1621  T

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Target: scaffold0078 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 37198 - 37105
Alignment:
Q  126 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 219  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  37198 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatat 37105  T

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Target: scaffold0066 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 208
Target Start/End: Original strand, 45144 - 45244
Alignment:
Q  109 caaaattcaccaattgagcacaattttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatg 206  Q
    |||||||||||||||||| ||||||| || |||||  ||||| |||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  45144 caaaattcaccaattgagtacaattt-caaaacttgacatttatacatactttgaaacatgtaatttcacccacaatcatacaattatcatcaattcatg 45242  T
Q  207 ca 208  Q
    ||    
T  45243 ca 45244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 109 - 208
Target Start/End: Original strand, 54530 - 54630
Alignment:
Q  109 caaaattcaccaattgagcacaattttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatg 206  Q
    |||||||||||||||||| ||||||| || |||||  ||||| |||||| |||||| |||| ||||||||| ||||||||||||||||||||||||||||    
T  54530 caaaattcaccaattgagtacaattt-cataacttgacatttatacatactttgaaacatgcaatttcacccacaatcatacaattatcatcaattcatg 54628  T
Q  207 ca 208  Q
    ||    
T  54629 ca 54630  T

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Target: scaffold0361 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 3296 - 3410
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacata-tttgaac-atgtaatttcaccaacaatcatacaattatcatca 199  Q
    ||||||||||||||||||| ||||| ||||||| || |||||   |||| |||||| ||||||  |||||||||||||||||||||||||| |||||| |    
T  3296 aacttagcaaaattcaccatttgagtacaattt-cataacttgatatttatacatactttgaaatatgtaatttcaccaacaatcatacaaatatcatta 3394  T
Q  200 attcatgcatacaaac 215  Q
    ||||||||||||||||    
T  3395 attcatgcatacaaac 3410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 208
Target Start/End: Complemental strand, 56256 - 56149
Alignment:
Q  102 aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaa--catgtaatttcaccaacaatcatacaattatcatca 199  Q
    ||||||||||||||||||| ||||||||||||| || |||||  ||||| |||||| || ||  |||||||||||| | |||||||||||||||||||||    
T  56256 aacttagcaaaattcaccatttgagcacaattt-cataacttgacatttatacatactttaaaacatgtaatttcagccacaatcatacaattatcatca 56158  T
Q  200 attcatgca 208  Q
    | |||||||    
T  56157 aatcatgca 56149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 110 - 206
Target Start/End: Original strand, 3529 - 3625
Alignment:
Q  110 aaaattcaccaattgagcacaattttcacaacttatcatttttacata-tttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatg 206  Q
    ||||||||||||||| | | ||||| ||||||||| || || |||||  |||||||||||||||||||| |||||||||| || ||||||||||||||    
T  3529 aaaattcaccaattgggtataattt-cacaacttaacaattatacatgctttgaacatgtaatttcacccacaatcataccataatcatcaattcatg 3625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 110 - 208
Target Start/End: Original strand, 53990 - 54088
Alignment:
Q  110 aaaattcaccaattgagcacaattttcacaacttatcatttttacata-tttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||||||||||||| | | ||||| ||||||||| || || |||||  |||||||||||||||||||| |||| ||||| || ||||||||||||||||    
T  53990 aaaattcaccaattgggtataattt-cacaacttaacaattatacatgctttgaacatgtaatttcacccacaaacataccataatcatcaattcatgca 54088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 22570 - 22452
Alignment:
Q  102 aacttagcaaaattcacc-aattgagcacaattttcacaacttatcatttttacata-tttgaacatgtaatttcaccaacaatcatacaattatcatca 199  Q
    ||||||||| |||||||| ||||||||| ||||  ||||| ||| || || |||| | |||||||||| || |||||||||||  || ||||||||||||    
T  22570 aacttagcataattcacccaattgagcataatt--cacaagttaacacttatacacactttgaacatgcaaattcaccaacaacaattcaattatcatca 22473  T
Q  200 a-ttcatgcatacaaacatat 219  Q
    | |||||||||||||||||||    
T  22472 atttcatgcatacaaacatat 22452  T

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Target: scaffold0123 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 8172 - 8234
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||||| || |||||||||||  || ||||||||||||| |||||||||||||||||||    
T  8172 tttgaacatgcaaattcaccaacaacaattcaattatcatcaatttcatgcatacaaacatat 8234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 1694 - 1617
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  1694 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 1617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 10458 - 10381
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| |||| ||||| || ||||||||||||||||    
T  10458 tttcataacttagcatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgca 10381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 4742 - 4829
Alignment:
Q  134 ttcacaacttatcatttttacatatt-tgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||  ||||||||| ||||| | |||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||    
T  4742 ttcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatat 4829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 22520 - 22445
Alignment:
Q  146 catttttacatattt-gaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    ||||| ||||||||| ||||||| || |||||||||||  ||  |||||||||||| |||||||||||||||||||    
T  22520 catttatacatattttgaacatgcaaattcaccaacaacaattaaattatcatcaatttcatgcatacaaacatat 22445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1666 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1666
Description:

Target: scaffold1666; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 84 - 38
Alignment:
Q  162 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  84 aacatgtaatttcacccacaaacataccataatcatcaattcatgca 38  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 2687 - 2749
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||    
T  2687 tttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcatccaaacatat 2749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 6823 - 6885
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||    
T  6823 tttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatat 6885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 1449 - 1371
Alignment:
Q  143 tatcatttttacata-tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    ||||||||| ||||| ||||| |||| ||||||||||||||  || ||||||||| ||| || ||||||||||||||||    
T  1449 tatcattttcacatactttgaccatgcaatttcaccaacaacaatccaattatcaccaattttatgcatacaaacatat 1371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 9704 - 9626
Alignment:
Q  143 tatcatttttacata-tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    ||||||||| ||||| ||||| |||| ||||||||||||||  || ||||||||| ||| || ||||||||||||||||    
T  9704 tatcattttcacatactttgaccatgcaatttcaccaacaacaatccaattatcaccaattttatgcatacaaacatat 9626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 76932 - 76870
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatat 219  Q
    |||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| |||||||||    
T  76932 tttgaacatgaaatttcaccaacaacaattcaattatcaacaatttcatgcattcaaacatat 76870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 1633 - 1556
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| | || ||||| || ||||||||||||||||    
T  1633 tttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccataatcatcaattcatgca 1556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 456 - 517
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacata 218  Q
    |||||||||| ||||||||||||||  ||| |||||||| ||| ||||||||| ||||||||    
T  456 tttgaacatgaaatttcaccaacaacaatataattatcaacaacttcatgcattcaaacata 517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 2401 - 2340
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacata 218  Q
    |||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| ||||||||    
T  2401 tttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacata 2340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 39783 - 39860
Alignment:
Q  133 tttcacaacttatcatttttacata-tttgaa-catgtaatttcaccaacaatcatacaattatcatcaattcatgca 208  Q
    ||||| |||||| ||||| |||||| |||||| |||||||||||||| ||||  |||| || ||||||||||||||||    
T  39783 tttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaaaataccataatcatcaattcatgca 39860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 43883 - 43822
Alignment:
Q  158 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacata 218  Q
    |||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| ||||||||    
T  43883 tttgaacatgaaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacata 43822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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