View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18832_high_7 (Length: 239)
Name: NF18832_high_7
Description: NF18832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18832_high_7 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 71 - 239
Target Start/End: Original strand, 41896022 - 41896190
Alignment:
| Q |
71 |
ctgatcttgctacagcacaaaataatttccctcaatctgcttctcaaaaccctaagatccatcaaggacaagatcttaacctagcttatccaccacaaac |
170 |
Q |
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| T |
41896022 |
ctgatcttgctacaacacaaaataatttccctcaatctgcttctcaaaaccctaagatccatcaaggacaagatcttaacctagcttatccaccacaaac |
41896121 |
T |
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| Q |
171 |
aactgaggataattgtaacaccatatctaaattcattgagcttccttacacaactgatcatcaagacaa |
239 |
Q |
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| T |
41896122 |
aactgaggataattataacaccatatctaaattcattgagcttccttacacaactgatcatcaagacaa |
41896190 |
T |
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