View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18832_low_7 (Length: 284)
Name: NF18832_low_7
Description: NF18832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18832_low_7 |
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Alignment Details
Target: chr1 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 28370753 - 28370489
Alignment:
| Q |
1 |
aattatcaacgaaaaaagaggttagatcaacgaaattcaacaagaagcatagttgaaacttaatgtatgtgtgactttcggacacagtcaccgagtagaa |
100 |
Q |
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| T |
28370753 |
aattatcaacgaaaaaagaggttagatcaacgaaattcaacaagaagcatagttgaaacttaatgtatgtgtgactttcggacacagtcaccgagtagaa |
28370654 |
T |
|
| Q |
101 |
gaagaagaa---tcaaattgaaagggaatgtttggagtgaaaagaaaatcaactttagtgggtttggcttttctaatgttcatgggtattgctgtttatt |
197 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28370653 |
gaagaagaagaatcaaattgaaagggaatgtttggagtgaaaagaaaatcaactttagtgggtttggcttttctaatgttcatgggtattgctgtttatt |
28370554 |
T |
|
| Q |
198 |
tcagactttgggctattgactacaacatttcaatcgatgattctgagctcttaaggtacgttcct |
262 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28370553 |
tcagactttgggctattgactacaacatttcaatcgatgattctgagctcttaaggtacgttcct |
28370489 |
T |
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