View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18836_high_16 (Length: 318)
Name: NF18836_high_16
Description: NF18836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18836_high_16 |
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Alignment Details
Target: chr2 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 13 - 180
Target Start/End: Complemental strand, 43800074 - 43799907
Alignment:
| Q |
13 |
atcaattatgctacactattatatttaatcgatccattgatgctaattgtttctattacagctgtggttaattagatacactactataatagttgaagtt |
112 |
Q |
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| T |
43800074 |
atcaattatgctacactattatatttaatcgatccattgatgctaattgtttctattacagctgtggttaattagatacactactataatagtttaagtt |
43799975 |
T |
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| Q |
113 |
catgtttagattgaataggattaagctaaatcatgacttgctaaatcataacttttgttacattatgg |
180 |
Q |
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| T |
43799974 |
catgtttagattgaataggattaagctaaatcatgacttgctaaatcataacttttgttacattatgg |
43799907 |
T |
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