View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18837_high_13 (Length: 349)

Name: NF18837_high_13
Description: NF18837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18837_high_13
NF18837_high_13
[»] chr8 (28 HSPs)
chr8 (12-328)||(5830309-5830625)
chr8 (284-323)||(26886059-26886098)
chr8 (284-324)||(6447194-6447234)
chr8 (272-324)||(19260595-19260647)
chr8 (285-324)||(13357457-13357496)
chr8 (285-324)||(21557439-21557478)
chr8 (286-325)||(31511978-31512017)
chr8 (289-324)||(32192904-32192939)
chr8 (285-324)||(33373768-33373807)
chr8 (285-324)||(41388674-41388713)
chr8 (285-323)||(15188905-15188943)
chr8 (285-322)||(13272540-13272577)
chr8 (285-318)||(40167328-40167361)
chr8 (292-324)||(498744-498776)
chr8 (284-324)||(1230677-1230717)
chr8 (292-324)||(4830021-4830053)
chr8 (292-324)||(6038291-6038323)
chr8 (292-324)||(6235567-6235599)
chr8 (292-324)||(7433153-7433185)
chr8 (284-324)||(7553684-7553724)
chr8 (292-324)||(8717491-8717523)
chr8 (292-324)||(12748914-12748946)
chr8 (292-324)||(12910822-12910854)
chr8 (285-325)||(13105100-13105140)
chr8 (290-322)||(14897607-14897639)
chr8 (292-324)||(30427744-30427776)
chr8 (284-324)||(32555259-32555299)
chr8 (292-324)||(37141370-37141402)
[»] chr1 (40 HSPs)
chr1 (285-324)||(3248783-3248822)
chr1 (285-323)||(29701337-29701375)
chr1 (284-322)||(31962452-31962490)
chr1 (277-322)||(22388193-22388238)
chr1 (292-324)||(15602193-15602225)
chr1 (284-324)||(25165108-25165148)
chr1 (292-324)||(29999370-29999402)
chr1 (292-324)||(40948931-40948963)
chr1 (277-324)||(1864235-1864282)
chr1 (272-319)||(4302445-4302492)
chr1 (284-323)||(8153140-8153179)
chr1 (273-316)||(28679676-28679719)
chr1 (284-319)||(29935988-29936023)
chr1 (285-324)||(30548107-30548146)
chr1 (285-324)||(30678829-30678868)
chr1 (285-324)||(33153896-33153935)
chr1 (285-324)||(43843897-43843936)
chr1 (282-324)||(2817389-2817431)
chr1 (285-319)||(10356204-10356238)
chr1 (273-323)||(29042531-29042581)
chr1 (292-322)||(30003214-30003244)
chr1 (289-319)||(32944746-32944776)
chr1 (284-322)||(41573287-41573325)
chr1 (92-129)||(12043677-12043714)
chr1 (282-323)||(20267369-20267410)
chr1 (292-324)||(2613735-2613767)
chr1 (292-324)||(3509957-3509989)
chr1 (292-324)||(7652114-7652146)
chr1 (292-324)||(8253752-8253784)
chr1 (285-325)||(10292942-10292982)
chr1 (284-324)||(16475929-16475969)
chr1 (292-324)||(17188684-17188716)
chr1 (292-324)||(25532986-25533018)
chr1 (292-324)||(34521206-34521238)
chr1 (292-324)||(41926835-41926867)
chr1 (292-324)||(42045388-42045420)
chr1 (284-324)||(43545866-43545906)
chr1 (292-324)||(43611437-43611469)
chr1 (292-324)||(45140022-45140054)
chr1 (292-324)||(45190285-45190317)
[»] chr6 (26 HSPs)
chr6 (272-324)||(2726433-2726485)
chr6 (285-324)||(16890464-16890503)
chr6 (292-324)||(11456391-11456423)
chr6 (292-324)||(16276709-16276741)
chr6 (285-324)||(2617221-2617260)
chr6 (285-324)||(6160684-6160723)
chr6 (285-324)||(28898862-28898901)
chr6 (285-319)||(361760-361794)
chr6 (285-319)||(404169-404203)
chr6 (286-324)||(1794967-1795005)
chr6 (277-319)||(3373402-3373444)
chr6 (277-323)||(5008837-5008883)
chr6 (292-322)||(10053263-10053293)
chr6 (271-324)||(4455612-4455665)
chr6 (285-322)||(24212557-24212594)
chr6 (284-324)||(1918474-1918514)
chr6 (285-321)||(6196550-6196586)
chr6 (284-324)||(8569714-8569754)
chr6 (292-324)||(12204382-12204414)
chr6 (287-319)||(15328838-15328870)
chr6 (292-324)||(16390442-16390474)
chr6 (292-324)||(20720797-20720829)
chr6 (292-324)||(20744151-20744183)
chr6 (292-324)||(24623333-24623365)
chr6 (292-324)||(28318040-28318072)
chr6 (292-324)||(32053801-32053833)
[»] chr4 (43 HSPs)
chr4 (284-324)||(43722770-43722810)
chr4 (292-325)||(51465350-51465383)
chr4 (292-324)||(10204853-10204885)
chr4 (284-324)||(17133796-17133836)
chr4 (292-324)||(17656809-17656841)
chr4 (292-324)||(22411777-22411809)
chr4 (86-126)||(51545589-51545629)
chr4 (285-324)||(874465-874504)
chr4 (285-324)||(6459940-6459979)
chr4 (292-323)||(8415512-8415543)
chr4 (289-324)||(9783909-9783944)
chr4 (277-324)||(16304114-16304161)
chr4 (285-324)||(32923246-32923285)
chr4 (284-315)||(33024161-33024192)
chr4 (293-324)||(36479005-36479036)
chr4 (285-324)||(38374963-38375002)
chr4 (285-324)||(43034358-43034397)
chr4 (285-319)||(9196219-9196253)
chr4 (285-323)||(14197448-14197486)
chr4 (284-322)||(34595954-34595992)
chr4 (285-319)||(36490574-36490608)
chr4 (293-323)||(40284132-40284162)
chr4 (279-324)||(685010-685055)
chr4 (92-129)||(17344232-17344269)
chr4 (279-324)||(27674336-27674381)
chr4 (292-324)||(281604-281636)
chr4 (292-324)||(897438-897470)
chr4 (292-324)||(2186349-2186381)
chr4 (292-324)||(10564481-10564513)
chr4 (292-324)||(11949779-11949811)
chr4 (292-324)||(20383501-20383533)
chr4 (284-324)||(21465616-21465656)
chr4 (284-324)||(21935017-21935057)
chr4 (284-324)||(22164285-22164325)
chr4 (292-324)||(23160053-23160085)
chr4 (292-324)||(28435264-28435296)
chr4 (284-324)||(32737751-32737791)
chr4 (292-324)||(36071157-36071189)
chr4 (272-324)||(40070984-40071036)
chr4 (292-324)||(44221460-44221492)
chr4 (292-324)||(50380852-50380884)
chr4 (292-324)||(52270046-52270078)
chr4 (284-324)||(56204952-56204992)
[»] chr2 (35 HSPs)
chr2 (284-324)||(145027-145067)
chr2 (285-324)||(14364060-14364099)
chr2 (284-324)||(3904207-3904247)
chr2 (285-325)||(8761579-8761619)
chr2 (292-324)||(19043122-19043154)
chr2 (292-324)||(39836725-39836757)
chr2 (285-324)||(2256977-2257016)
chr2 (277-324)||(22267511-22267558)
chr2 (269-324)||(32957559-32957614)
chr2 (285-324)||(34977210-34977249)
chr2 (279-314)||(42365186-42365221)
chr2 (85-123)||(5610090-5610128)
chr2 (277-319)||(14925253-14925295)
chr2 (285-319)||(15462883-15462917)
chr2 (272-318)||(16407154-16407200)
chr2 (294-324)||(28202421-28202451)
chr2 (277-323)||(30929062-30929108)
chr2 (274-324)||(33966316-33966366)
chr2 (294-324)||(41542999-41543029)
chr2 (273-318)||(40874094-40874139)
chr2 (279-324)||(44868419-44868464)
chr2 (292-324)||(660838-660870)
chr2 (292-324)||(833085-833117)
chr2 (292-324)||(2429029-2429061)
chr2 (292-324)||(4238772-4238804)
chr2 (292-324)||(4557787-4557819)
chr2 (292-324)||(6765623-6765655)
chr2 (292-324)||(9383225-9383257)
chr2 (272-324)||(9547425-9547477)
chr2 (272-324)||(13196693-13196745)
chr2 (294-322)||(15770805-15770833)
chr2 (284-324)||(24548122-24548162)
chr2 (292-324)||(25598578-25598610)
chr2 (284-324)||(41859857-41859897)
chr2 (292-324)||(44488026-44488058)
[»] chr5 (29 HSPs)
chr5 (285-324)||(27651546-27651585)
chr5 (292-325)||(17239396-17239429)
chr5 (272-324)||(4432109-4432161)
chr5 (292-324)||(26409266-26409298)
chr5 (292-324)||(26655477-26655509)
chr5 (292-324)||(26927062-26927094)
chr5 (292-324)||(42515820-42515852)
chr5 (289-324)||(12190002-12190037)
chr5 (277-324)||(12909182-12909229)
chr5 (271-318)||(14124293-14124340)
chr5 (289-324)||(24485709-24485744)
chr5 (285-324)||(29695021-29695060)
chr5 (92-143)||(39290834-39290885)
chr5 (285-324)||(41650955-41650994)
chr5 (292-322)||(16188837-16188867)
chr5 (292-322)||(16188939-16188969)
chr5 (285-319)||(17046340-17046374)
chr5 (289-319)||(18749196-18749226)
chr5 (286-319)||(3389169-3389202)
chr5 (285-322)||(40027782-40027819)
chr5 (85-125)||(3575149-3575189)
chr5 (284-324)||(7070922-7070962)
chr5 (292-324)||(10199032-10199064)
chr5 (284-324)||(10515558-10515598)
chr5 (284-324)||(21316887-21316927)
chr5 (292-324)||(36162905-36162937)
chr5 (292-324)||(37932343-37932375)
chr5 (292-324)||(39143727-39143759)
chr5 (292-324)||(42505885-42505917)
[»] chr3 (33 HSPs)
chr3 (285-324)||(27432240-27432279)
chr3 (285-324)||(46903914-46903953)
chr3 (284-324)||(7827513-7827553)
chr3 (284-324)||(7829901-7829941)
chr3 (292-328)||(28093367-28093403)
chr3 (285-324)||(2186443-2186482)
chr3 (272-315)||(5293670-5293713)
chr3 (285-324)||(7464507-7464546)
chr3 (285-324)||(8747252-8747290)
chr3 (277-324)||(17035929-17035976)
chr3 (285-324)||(19468457-19468496)
chr3 (289-324)||(21245803-21245838)
chr3 (285-324)||(38130975-38131014)
chr3 (285-324)||(54018422-54018461)
chr3 (290-324)||(8139726-8139760)
chr3 (273-319)||(19883081-19883127)
chr3 (284-322)||(41087576-41087614)
chr3 (285-323)||(44968183-44968221)
chr3 (289-319)||(46483257-46483287)
chr3 (285-319)||(51882221-51882255)
chr3 (285-322)||(52543710-52543747)
chr3 (292-324)||(977957-977989)
chr3 (292-324)||(10498711-10498743)
chr3 (292-324)||(19126693-19126725)
chr3 (285-321)||(23332656-23332692)
chr3 (292-324)||(25441516-25441548)
chr3 (285-324)||(25874136-25874176)
chr3 (284-324)||(26610509-26610548)
chr3 (284-324)||(27397628-27397668)
chr3 (292-324)||(29631199-29631231)
chr3 (292-324)||(42269311-42269343)
chr3 (292-324)||(45254244-45254276)
chr3 (292-324)||(53996312-53996344)
[»] chr7 (28 HSPs)
chr7 (277-322)||(20205820-20205865)
chr7 (284-324)||(19599150-19599190)
chr7 (284-324)||(30857253-30857293)
chr7 (285-324)||(3584210-3584249)
chr7 (285-324)||(5041345-5041384)
chr7 (281-324)||(19684228-19684271)
chr7 (277-324)||(21099789-21099836)
chr7 (285-324)||(21928134-21928173)
chr7 (285-324)||(22991407-22991446)
chr7 (285-324)||(23413062-23413101)
chr7 (285-324)||(27263347-27263386)
chr7 (285-324)||(27270241-27270280)
chr7 (285-324)||(34448626-34448665)
chr7 (285-324)||(40187652-40187691)
chr7 (289-324)||(41527570-41527605)
chr7 (292-323)||(43346581-43346612)
chr7 (277-324)||(44770159-44770206)
chr7 (274-324)||(7908588-7908638)
chr7 (285-319)||(39043761-39043795)
chr7 (284-324)||(1399167-1399207)
chr7 (292-324)||(10244740-10244772)
chr7 (274-322)||(10953560-10953608)
chr7 (285-317)||(23863723-23863755)
chr7 (292-324)||(27462452-27462484)
chr7 (292-324)||(27833417-27833449)
chr7 (292-324)||(37624556-37624588)
chr7 (292-324)||(42043082-42043114)
chr7 (292-324)||(44558790-44558822)
[»] scaffold0567 (1 HSPs)
scaffold0567 (292-324)||(7555-7587)
[»] scaffold0350 (1 HSPs)
scaffold0350 (292-324)||(1261-1293)
[»] scaffold0122 (1 HSPs)
scaffold0122 (284-324)||(14202-14242)
[»] scaffold0118 (1 HSPs)
scaffold0118 (292-324)||(40011-40043)
[»] scaffold0038 (1 HSPs)
scaffold0038 (292-324)||(109146-109178)


Alignment Details
Target: chr8 (Bit Score: 261; Significance: 1e-145; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 12 - 328
Target Start/End: Complemental strand, 5830625 - 5830309
Alignment:
Q  12 aatactataaatcataactatcgtcttatattctccatgtgtctttgcacacgttctcaattgctcaatgcagtcttatatataagaaaaagttaaatca 111  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5830625 aatactataaatcataactaacgtcatatattctccatgtgtctttgcacacgttctcaattgctcaatgcagtcttatatataagaaaaagttaaatca 5830526  T
Q  112 acaaaagttaatgtatctaacaaaaaatttaaagcaaattgtatatcaattttgttggcgtcactttttcttatatatataaacatgacttgagggagta 211  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5830525 acaaaagttaatgtatctagcaaaaaatttaaagcaaattatatatcaattttgttggcctcactttttcttatatatataaacatgacttgagggagta 5830426  T
Q  212 taagattaatatatgacataaaaagtgagatgactcatatcatgtgagattcatatgagtagtcatcgtaaatttaacttagttggtatggacaatgcat 311  Q
    ||||||||||||||| ||||||||||| || ||||| |||||||||||||||||||||||||||||||| || |||| |||||||||||| |||||| ||    
T  5830425 taagattaatatatggcataaaaagtgtgaggactcttatcatgtgagattcatatgagtagtcatcgtgaacttaatttagttggtatgaacaatgtat 5830326  T
Q  312 aatatatgtaaggggtt 328  Q
    |||||||||||||||||    
T  5830325 aatatatgtaaggggtt 5830309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 26886098 - 26886059
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaag 323  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  26886098 tttaacttagttggtatggacaatgcataaaatatgtaag 26886059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 6447194 - 6447234
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||| |||||||||||||||||||||||||||| ||||    
T  6447194 tttaactcagttggtatggacaatgcataatatatgcaagg 6447234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 19260647 - 19260595
Alignment:
Q  272 agtcatcgtaaatttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||| |||||| |||| |||||||| |||| ||||||||||||||||||||||    
T  19260647 agtcctcgtaagtttagcttagttgatatgtacaatgcataatatatgtaagg 19260595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 13357496 - 13357457
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  13357496 ttaactcagttggtatggacaatgcataatatatgcaagg 13357457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 21557439 - 21557478
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| |||| ||||||||||||||||||||||||||||    
T  21557439 ttaactcagttagtatggacaatgcataatatatgtaagg 21557478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 325
Target Start/End: Original strand, 31511978 - 31512017
Alignment:
Q  286 taacttagttggtatggacaatgcataatatatgtaaggg 325  Q
    ||||| |||||||| |||||||||||||||||||||||||    
T  31511978 taactcagttggtagggacaatgcataatatatgtaaggg 31512017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 324
Target Start/End: Original strand, 32192904 - 32192939
Alignment:
Q  289 cttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||||||||||||||||||||||||| ||||    
T  32192904 cttagttggtatggacaatgcataatatatgcaagg 32192939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 33373807 - 33373768
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| |||||||||||||||| ||||||||||||||||    
T  33373807 ttaactcagttggtatggacaattcataatatatgtaagg 33373768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 41388713 - 41388674
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||| |||||||||| |||||||||||||||||||||||    
T  41388713 ttaacctagttggtatagacaatgcataatatatgtaagg 41388674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 15188905 - 15188943
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaag 323  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  15188905 ttaactcagttagtatggacaatgcataatatatgtaag 15188943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Complemental strand, 13272577 - 13272540
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaa 322  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  13272577 ttaactcagttgatatggacaatgcataatatatgtaa 13272540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 318
Target Start/End: Original strand, 40167328 - 40167361
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatat 318  Q
    |||||| |||||||||||||||||||||||||||    
T  40167328 ttaactcagttggtatggacaatgcataatatat 40167361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 498744 - 498776
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  498744 agttggtatggacaatgcataatatatgcaagg 498776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 1230717 - 1230677
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||| |||||||| | ||||||||||||||||||||||    
T  1230717 tttaactcagttggtaggaacaatgcataatatatgtaagg 1230677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 4830021 - 4830053
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  4830021 agttggtatggacaatgcataatatatgcaagg 4830053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 6038323 - 6038291
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    ||||| |||||||||||||||||||||||||||    
T  6038323 agttgatatggacaatgcataatatatgtaagg 6038291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 6235599 - 6235567
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||||||| |||||||||||||||||||    
T  6235599 agttggtatggacgatgcataatatatgtaagg 6235567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 7433153 - 7433185
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||| |||||||||||||||||||||||||    
T  7433153 agttggtttggacaatgcataatatatgtaagg 7433185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 7553684 - 7553724
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||| |||||||| ||||||||||||||||||| ||||    
T  7553684 tttaactcagttggtagggacaatgcataatatatgcaagg 7553724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 8717523 - 8717491
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  8717523 agttggtatggacaatgcataatatatgcaagg 8717491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 12748914 - 12748946
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  12748914 agttggtatggacaatgcataatatatgcaagg 12748946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 12910854 - 12910822
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  12910854 agttggtatggacaatgcataatatatgcaagg 12910822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 325
Target Start/End: Original strand, 13105100 - 13105140
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaaggg 325  Q
    |||||| |||||||| ||||||||||||||||||| |||||    
T  13105100 ttaactcagttggtagggacaatgcataatatatgcaaggg 13105140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 322
Target Start/End: Complemental strand, 14897639 - 14897607
Alignment:
Q  290 ttagttggtatggacaatgcataatatatgtaa 322  Q
    |||||||||| ||||||||||||||||||||||    
T  14897639 ttagttggtaaggacaatgcataatatatgtaa 14897607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 30427744 - 30427776
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  30427744 agttggtatggacaatgcataatatatgcaagg 30427776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 32555259 - 32555299
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||| ||||||||||||||||||||||||| ||||| ||||    
T  32555259 tttagcttagttggtatggacaatgcataaaatatgcaagg 32555299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 37141370 - 37141402
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  37141370 agttggtatggacaatgcataatatatgcaagg 37141402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 3248783 - 3248822
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3248783 ttaacttagttggtatggacaatgcataatatatgtaagg 3248822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 29701375 - 29701337
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaag 323  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  29701375 ttaacttagttgatatggacaatgcataatatatgtaag 29701337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 322
Target Start/End: Original strand, 31962452 - 31962490
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaa 322  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  31962452 tttaacttagttggtaaggacaatgcataatatatgtaa 31962490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 22388238 - 22388193
Alignment:
Q  277 tcgtaaatttaacttagttggtatggacaatgcataatatatgtaa 322  Q
    |||||| ||||||||||||| || ||||||||||||||||||||||    
T  22388238 tcgtaagtttaacttagttgatagggacaatgcataatatatgtaa 22388193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 15602225 - 15602193
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||||||||    
T  15602225 agttggtatggacaatgcataatatatgtaagg 15602193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 25165148 - 25165108
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||| | |||||||||||||||||||||||||||||||    
T  25165148 tttaactcaattggtatggacaatgcataatatatgtaagg 25165108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 29999402 - 29999370
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||||||||    
T  29999402 agttggtatggacaatgcataatatatgtaagg 29999370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 40948931 - 40948963
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||||||||    
T  40948931 agttggtatggacaatgcataatatatgtaagg 40948963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 324
Target Start/End: Complemental strand, 1864282 - 1864235
Alignment:
Q  277 tcgtaaatttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| ||||||||||||||||  |||||||||||||||||| ||||    
T  1864282 tcgtaagtttaacttagttggtagagacaatgcataatatatgcaagg 1864235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 319
Target Start/End: Original strand, 4302445 - 4302492
Alignment:
Q  272 agtcatcgtaaatttaacttagttggtatggacaatgcataatatatg 319  Q
    |||| ||||||| |||  ||||||||||||||||||||||||||||||    
T  4302445 agtcctcgtaaacttagtttagttggtatggacaatgcataatatatg 4302492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 8153140 - 8153179
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaag 323  Q
    ||||||| ||||||||| ||||||||||||||||||||||    
T  8153140 tttaactcagttggtatagacaatgcataatatatgtaag 8153179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 316
Target Start/End: Original strand, 28679676 - 28679719
Alignment:
Q  273 gtcatcgtaaatttaacttagttggtatggacaatgcataatat 316  Q
    ||||| |||||||||||||||||||||  |||||||||||||||    
T  28679676 gtcattgtaaatttaacttagttggtaaagacaatgcataatat 28679719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 319
Target Start/End: Original strand, 29935988 - 29936023
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatg 319  Q
    ||||||| ||||||||||||||||||||||||||||    
T  29935988 tttaactcagttggtatggacaatgcataatatatg 29936023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 30548146 - 30548107
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  30548146 ttaacttagttggtaaggacaatgcataatatatgcaagg 30548107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 30678868 - 30678829
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  30678868 ttaactcagttggtagggacaatgcataatatatgtaagg 30678829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 33153935 - 33153896
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  33153935 ttaactcagttggtagggacaatgcataatatatgtaagg 33153896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 43843897 - 43843936
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  43843897 ttaacttagttggtaaggacaatgcataatatatgcaagg 43843936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 324
Target Start/End: Complemental strand, 2817431 - 2817389
Alignment:
Q  282 aatttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| || |||||||| ||||||||||||||||||||||||    
T  2817431 aatttagctcagttggtaaggacaatgcataatatatgtaagg 2817389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 319
Target Start/End: Complemental strand, 10356238 - 10356204
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatg 319  Q
    |||||| ||||||||||||||||||||||||||||    
T  10356238 ttaactcagttggtatggacaatgcataatatatg 10356204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 323
Target Start/End: Original strand, 29042531 - 29042581
Alignment:
Q  273 gtcatcgtaaatttaacttagttggtatggacaatgcataatatatgtaag 323  Q
    ||||||||||| |||||| | |||||| ||| |||||||||||||||||||    
T  29042531 gtcatcgtaaacttaactcaattggtagggataatgcataatatatgtaag 29042581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 322
Target Start/End: Original strand, 30003214 - 30003244
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaa 322  Q
    |||||||||||||||||||||||||||||||    
T  30003214 agttggtatggacaatgcataatatatgtaa 30003244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 32944746 - 32944776
Alignment:
Q  289 cttagttggtatggacaatgcataatatatg 319  Q
    |||||||||||||||||||||||||||||||    
T  32944746 cttagttggtatggacaatgcataatatatg 32944776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 322
Target Start/End: Complemental strand, 41573325 - 41573287
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaa 322  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  41573325 tttaactcagttggtagggacaatgcataatatatgtaa 41573287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 12043714 - 12043677
Alignment:
Q  92 tataagaaaaagttaaatcaacaaaagttaatgtatct 129  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  12043714 tataagaaaaatttaaatcaacaaaaattaatgtatct 12043677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 323
Target Start/End: Complemental strand, 20267410 - 20267369
Alignment:
Q  282 aatttaacttagttggtatggacaatgcataatatatgtaag 323  Q
    |||||| ||||||||||| |||||||||||||| ||||||||    
T  20267410 aatttagcttagttggtaaggacaatgcataatctatgtaag 20267369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 2613735 - 2613767
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||| ||||||||||    
T  2613735 agttggtatggacaatgcataaaatatgtaagg 2613767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 3509989 - 3509957
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  3509989 agttggtatggacaatgcataatatatgcaagg 3509957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 7652114 - 7652146
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||| ||||||||||||||||    
T  7652114 agttggtatggacaatacataatatatgtaagg 7652146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 8253752 - 8253784
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  8253752 agttggtatggacaatgcataatatatgcaagg 8253784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 325
Target Start/End: Original strand, 10292942 - 10292982
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaaggg 325  Q
    |||||| ||||| || |||||||||||||||||||||||||    
T  10292942 ttaactcagttgatagggacaatgcataatatatgtaaggg 10292982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 16475969 - 16475929
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||| | ||||| ||||||||||||||||    
T  16475969 tttaacttagttggtaggaacaatacataatatatgtaagg 16475929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 17188716 - 17188684
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||| ||||||||||    
T  17188716 agttggtatggacaatgcataaaatatgtaagg 17188684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 25532986 - 25533018
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  25532986 agttggtatggacaatgcataatatatgcaagg 25533018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 34521238 - 34521206
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  34521238 agttggtatggacaatgcataatatatgcaagg 34521206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 41926835 - 41926867
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||| ||||||||||||||||||||||||    
T  41926835 agttggtaaggacaatgcataatatatgtaagg 41926867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 42045420 - 42045388
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  42045420 agttggtatggacaatgcataatatatgcaagg 42045388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 43545906 - 43545866
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||||||||||| |||||||||||| ||||| ||||    
T  43545906 tttaacttagttggtattgacaatgcataaaatatgcaagg 43545866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 43611437 - 43611469
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||| ||||||||||||||||    
T  43611437 agttggtatggacaatacataatatatgtaagg 43611469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 45140054 - 45140022
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  45140054 agttggtatggacaatgcataatatatgcaagg 45140022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 45190317 - 45190285
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  45190317 agttggtatggacaatgcataatatatgcaagg 45190285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000008; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 2726485 - 2726433
Alignment:
Q  272 agtcatcgtaaatttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||| ||||||| |||||| |||||||||||||||||||||||||||| ||||    
T  2726485 agtcctcgtaaacttaactcagttggtatggacaatgcataatatatgcaagg 2726433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 16890503 - 16890464
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  16890503 ttaacttagttggtatggacaatgcataaaatatgtaagg 16890464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 11456423 - 11456391
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||||||||    
T  11456423 agttggtatggacaatgcataatatatgtaagg 11456391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 16276741 - 16276709
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||||||||    
T  16276741 agttggtatggacaatgcataatatatgtaagg 16276709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 2617260 - 2617221
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  2617260 ttaacttagttggtagagacaatgcataatatatgtaagg 2617221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 6160723 - 6160684
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  6160723 ttaacttagttggtatggacaatgtataatatatgcaagg 6160684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 28898862 - 28898901
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  28898862 ttaacttagttggtaaggacaatgcataatatatgaaagg 28898901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 319
Target Start/End: Original strand, 361760 - 361794
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatg 319  Q
    |||||| ||||||||||||||||||||||||||||    
T  361760 ttaactcagttggtatggacaatgcataatatatg 361794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 319
Target Start/End: Original strand, 404169 - 404203
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatg 319  Q
    ||||||||||||||| |||||||||||||||||||    
T  404169 ttaacttagttggtaaggacaatgcataatatatg 404203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 324
Target Start/End: Complemental strand, 1795005 - 1794967
Alignment:
Q  286 taacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  1795005 taactcagttgatatggacaatgcataatatatgtaagg 1794967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 319
Target Start/End: Complemental strand, 3373444 - 3373402
Alignment:
Q  277 tcgtaaatttaacttagttggtatggacaatgcataatatatg 319  Q
    |||| ||||||||| ||||| ||||||||||||||||||||||    
T  3373444 tcgtgaatttaactcagttgatatggacaatgcataatatatg 3373402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 323
Target Start/End: Original strand, 5008837 - 5008883
Alignment:
Q  277 tcgtaaatttaacttagttggtatggacaatgcataatatatgtaag 323  Q
    ||||||||||| || |||||||| |||||||||||||||||| ||||    
T  5008837 tcgtaaatttagctcagttggtaaggacaatgcataatatatataag 5008883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 322
Target Start/End: Original strand, 10053263 - 10053293
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaa 322  Q
    |||||||||||||||||||||||||||||||    
T  10053263 agttggtatggacaatgcataatatatgtaa 10053293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 4455665 - 4455612
Alignment:
Q  271 tagtcatcgtaaatttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||| || ||| || ||||||||||||||| |||||||||||| ||||    
T  4455665 tagtcatcgtcaacttagctcagttggtatggacaaggcataatatatgcaagg 4455612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Complemental strand, 24212594 - 24212557
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaa 322  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  24212594 ttaactcagttgatatggacaatgcataatatatgtaa 24212557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 1918514 - 1918474
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||| ||||||||| |||||||||||||||||| ||||    
T  1918514 tttaactcagttggtatagacaatgcataatatatgcaagg 1918474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 321
Target Start/End: Complemental strand, 6196586 - 6196550
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgta 321  Q
    |||||| |||||||| |||||||||||||||||||||    
T  6196586 ttaactcagttggtaaggacaatgcataatatatgta 6196550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 8569714 - 8569754
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||| | |||||||||||||||||||||||||| ||||    
T  8569714 tttaactcaattggtatggacaatgcataatatatgcaagg 8569754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 12204382 - 12204414
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    ||||| |||||||||||||||||||||||||||    
T  12204382 agttgatatggacaatgcataatatatgtaagg 12204414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 319
Target Start/End: Complemental strand, 15328870 - 15328838
Alignment:
Q  287 aacttagttggtatggacaatgcataatatatg 319  Q
    |||||||||||||||| ||||||||||||||||    
T  15328870 aacttagttggtatgggcaatgcataatatatg 15328838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 16390442 - 16390474
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||| ||||||||||||||||||||||||    
T  16390442 agttggtagggacaatgcataatatatgtaagg 16390474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 20720829 - 20720797
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    ||||| |||||||||||||||||||||||||||    
T  20720829 agttgttatggacaatgcataatatatgtaagg 20720797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 20744151 - 20744183
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  20744151 agttggtatggacaatgcataatatatgcaagg 20744183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 24623365 - 24623333
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    ||||| |||||||||||||||||||||||||||    
T  24623365 agttgatatggacaatgcataatatatgtaagg 24623333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 28318040 - 28318072
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  28318040 agttggtatggacaatgcataatatatgcaagg 28318072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 32053801 - 32053833
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  32053801 agttggtatggacaatgcataatatatgcaagg 32053833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000008; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 43722770 - 43722810
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  43722770 tttaactcagttggtatggacaatgcataatatatgtaagg 43722810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 325
Target Start/End: Original strand, 51465350 - 51465383
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaaggg 325  Q
    ||||||||||||||||||||||||||||||||||    
T  51465350 agttggtatggacaatgcataatatatgtaaggg 51465383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 10204853 - 10204885
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||||||||    
T  10204853 agttggtatggacaatgcataatatatgtaagg 10204885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 17133836 - 17133796
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||||||||||||||| |||||||||||||| ||||    
T  17133836 tttaacttagttggtatggacgatgcataatatatgaaagg 17133796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 17656841 - 17656809
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||||||||    
T  17656841 agttggtatggacaatgcataatatatgtaagg 17656809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 22411777 - 22411809
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||||||||    
T  22411777 agttggtatggacaatgcataatatatgtaagg 22411809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 51545629 - 51545589
Alignment:
Q  86 cttatatataagaaaaagttaaatcaacaaaagttaatgta 126  Q
    ||||||||||||| ||||||| |||||||||||||||||||    
T  51545629 cttatatataagataaagttagatcaacaaaagttaatgta 51545589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 874465 - 874504
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  874465 ttaacttagttgatatggacaatgcataatatatataagg 874504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 6459979 - 6459940
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| ||||| |||||||||||||||||||||||||||    
T  6459979 ttaactcagttgatatggacaatgcataatatatgtaagg 6459940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 292 - 323
Target Start/End: Complemental strand, 8415543 - 8415512
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaag 323  Q
    ||||||||||||||||||||||||||||||||    
T  8415543 agttggtatggacaatgcataatatatgtaag 8415512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 324
Target Start/End: Original strand, 9783909 - 9783944
Alignment:
Q  289 cttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||| |||||||||||||||||||||||||||    
T  9783909 cttagttgatatggacaatgcataatatatgtaagg 9783944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 324
Target Start/End: Complemental strand, 16304161 - 16304114
Alignment:
Q  277 tcgtaaatttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| |||| || |||||||||||||||||||||||||||| ||||    
T  16304161 tcgtaagtttagctcagttggtatggacaatgcataatatatgcaagg 16304114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 32923285 - 32923246
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| |||||||||| ||||||||||||||||||||||    
T  32923285 ttaactcagttggtatgaacaatgcataatatatgtaagg 32923246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 315
Target Start/End: Original strand, 33024161 - 33024192
Alignment:
Q  284 tttaacttagttggtatggacaatgcataata 315  Q
    ||||||||||||||||||||||||||||||||    
T  33024161 tttaacttagttggtatggacaatgcataata 33024192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 324
Target Start/End: Original strand, 36479005 - 36479036
Alignment:
Q  293 gttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||||||||||||||||||||||||||    
T  36479005 gttggtatggacaatgcataatatatgtaagg 36479036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 38374963 - 38375002
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  38374963 ttaacttagttggtagggacaatgcataatatatgcaagg 38375002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 43034397 - 43034358
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  43034397 ttaactcagttggtatggacaatgcataatatatgcaagg 43034358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 319
Target Start/End: Original strand, 9196219 - 9196253
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatg 319  Q
    |||||||||||| ||||||||||||||||||||||    
T  9196219 ttaacttagttgatatggacaatgcataatatatg 9196253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 14197486 - 14197448
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaag 323  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  14197486 ttaactcagttggtagggacaatgcataatatatgtaag 14197448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 322
Target Start/End: Complemental strand, 34595992 - 34595954
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaa 322  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  34595992 tttaactcagttggtaaggacaatgcataatatatgtaa 34595954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 319
Target Start/End: Original strand, 36490574 - 36490608
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatg 319  Q
    |||||||||||||||||||||||||||||| ||||    
T  36490574 ttaacttagttggtatggacaatgcataatgtatg 36490608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 323
Target Start/End: Original strand, 40284132 - 40284162
Alignment:
Q  293 gttggtatggacaatgcataatatatgtaag 323  Q
    |||||||||||||||||||||||||||||||    
T  40284132 gttggtatggacaatgcataatatatgtaag 40284162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 324
Target Start/End: Complemental strand, 685055 - 685010
Alignment:
Q  279 gtaaatttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||| | |||||||||| |||||||||| |||||||||||    
T  685055 gtaaatttaattcagttggtatgaacaatgcatattatatgtaagg 685010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 17344232 - 17344269
Alignment:
Q  92 tataagaaaaagttaaatcaacaaaagttaatgtatct 129  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  17344232 tataagagaaagttaaatcaacaaaagttgatgtatct 17344269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 324
Target Start/End: Original strand, 27674336 - 27674381
Alignment:
Q  279 gtaaatttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||| ||||||||||| |||||||||| |||||||| ||||    
T  27674336 gtaaatttagcttagttggtaaggacaatgcaaaatatatgcaagg 27674381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 281604 - 281636
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  281604 agttggtatggacaatgcataatatatgaaagg 281636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 897438 - 897470
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||||||||||| |||||||||||||||    
T  897438 agttggtatggacaatgtataatatatgtaagg 897470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 2186381 - 2186349
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  2186381 agttggtatggacaatgcataatatatgcaagg 2186349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 10564513 - 10564481
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||| ||||||||||||||||    
T  10564513 agttggtatggacaatacataatatatgtaagg 10564481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 11949811 - 11949779
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  11949811 agttggtatggacaatgcataatatatgcaagg 11949779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 20383501 - 20383533
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  20383501 agttggtatggacaatgcataatatatgcaagg 20383533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 21465616 - 21465656
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||| |||| ||| ||||||||||||||||||||||||    
T  21465616 tttaactcagttagtaaggacaatgcataatatatgtaagg 21465656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 21935017 - 21935057
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||| ||||||||| ||||||||||||| |||||||||    
T  21935017 tttaactcagttggtatagacaatgcataatgtatgtaagg 21935057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 22164325 - 22164285
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||| ||||||||||| | ||||||||||||||||||||||    
T  22164325 tttagcttagttggtaggaacaatgcataatatatgtaagg 22164285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 23160053 - 23160085
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||| ||||||||||||||||||||||||    
T  23160053 agttggtagggacaatgcataatatatgtaagg 23160085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 28435296 - 28435264
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  28435296 agttggtatggacaatgcataatatatgcaagg 28435264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 32737791 - 32737751
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||| ||||||||||||||| |||||||||| ||||    
T  32737791 tttaacttaattggtatggacaatgtataatatatgcaagg 32737751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 36071157 - 36071189
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||| ||||||||||||||||||||||||    
T  36071157 agttggtaaggacaatgcataatatatgtaagg 36071189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 40071036 - 40070984
Alignment:
Q  272 agtcatcgtaaatttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||| |  |||||| |||||||||| ||||||||||||||||| ||||    
T  40071036 agtcatcgtgagcttaactcagttggtatgaacaatgcataatatatgcaagg 40070984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 44221460 - 44221492
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  44221460 agttggtatggacaatgcataatatatgcaagg 44221492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 50380884 - 50380852
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||| ||||||||||||||||||||||    
T  50380884 agttggtatgaacaatgcataatatatgtaagg 50380852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 52270078 - 52270046
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  52270078 agttggtatggacaatgcataatatatgcaagg 52270046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 56204952 - 56204992
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||| |||||||| ||||||||||||||||||| ||||    
T  56204952 tttaactcagttggtaaggacaatgcataatatatgcaagg 56204992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000008; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 145067 - 145027
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  145067 tttaactcagttggtatggacaatgcataatatatgtaagg 145027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 14364060 - 14364099
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  14364060 ttaactcagttggtatggacaatgcataatatatgtaagg 14364099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 3904207 - 3904247
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  3904207 tttaacttagttgatagggacaatgcataatatatgtaagg 3904247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 325
Target Start/End: Complemental strand, 8761619 - 8761579
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaaggg 325  Q
    |||||| |||||||||||||||| |||||||||||||||||    
T  8761619 ttaactcagttggtatggacaatacataatatatgtaaggg 8761579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 19043122 - 19043154
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||||||||    
T  19043122 agttggtatggacaatgcataatatatgtaagg 19043154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 39836757 - 39836725
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||||||||    
T  39836757 agttggtatggacaatgcataatatatgtaagg 39836725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 2256977 - 2257016
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  2256977 ttaactcagttggtatggacaatgcataatatatgcaagg 2257016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 324
Target Start/End: Original strand, 22267511 - 22267558
Alignment:
Q  277 tcgtaaatttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| ||||||| |||||||| ||||||||||||||||||| ||||    
T  22267511 tcgtaagtttaactcagttggtacggacaatgcataatatatgcaagg 22267558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 269 - 324
Target Start/End: Complemental strand, 32957614 - 32957559
Alignment:
Q  269 agtagtcatcgtaaatttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||| | |||| ||  ||||||||| ||||||||||||||||||||||    
T  32957614 agtagtcatcgtgagtttagctcggttggtatgaacaatgcataatatatgtaagg 32957559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 34977210 - 34977249
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  34977210 ttaactcagttggtatggacaatgcataatatatgcaagg 34977249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 314
Target Start/End: Complemental strand, 42365221 - 42365186
Alignment:
Q  279 gtaaatttaacttagttggtatggacaatgcataat 314  Q
    |||||||||| |||||||||||||||||||||||||    
T  42365221 gtaaatttaatttagttggtatggacaatgcataat 42365186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 123
Target Start/End: Complemental strand, 5610128 - 5610090
Alignment:
Q  85 tcttatatataagaaaaagttaaatcaacaaaagttaat 123  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  5610128 tcttataaataagaaaaagttatatcaacaaaagttaat 5610090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 319
Target Start/End: Complemental strand, 14925295 - 14925253
Alignment:
Q  277 tcgtaaatttaacttagttggtatggacaatgcataatatatg 319  Q
    |||||||||||||| |||||||| |||||||| ||||||||||    
T  14925295 tcgtaaatttaactcagttggtaaggacaatgtataatatatg 14925253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 319
Target Start/End: Original strand, 15462883 - 15462917
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatg 319  Q
    |||||| ||||||||||||||||||||||||||||    
T  15462883 ttaactcagttggtatggacaatgcataatatatg 15462917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 318
Target Start/End: Original strand, 16407154 - 16407200
Alignment:
Q  272 agtcatcgtaaatttaacttagttggtatggacaatgcataatatat 318  Q
    ||||||||| |||||| ||||||||||| ||||| ||||||||||||    
T  16407154 agtcatcgtgaatttatcttagttggtaaggacagtgcataatatat 16407200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 324
Target Start/End: Original strand, 28202421 - 28202451
Alignment:
Q  294 ttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||||||    
T  28202421 ttggtatggacaatgcataatatatgtaagg 28202451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 323
Target Start/End: Complemental strand, 30929108 - 30929062
Alignment:
Q  277 tcgtaaatttaacttagttggtatggacaatgcataatatatgtaag 323  Q
    |||||| ||||||| ||||| ||||||||||||||||||||| ||||    
T  30929108 tcgtaagtttaactcagttgatatggacaatgcataatatatataag 30929062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 324
Target Start/End: Original strand, 33966316 - 33966366
Alignment:
Q  274 tcatcgtaaatttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||| || |||||| |||||||||| ||||||||||||||||| ||||    
T  33966316 tcatcgtgaacttaactcagttggtatgaacaatgcataatatatgcaagg 33966366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 324
Target Start/End: Complemental strand, 41543029 - 41542999
Alignment:
Q  294 ttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||||||    
T  41543029 ttggtatggacaatgcataatatatgtaagg 41542999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 318
Target Start/End: Complemental strand, 40874139 - 40874094
Alignment:
Q  273 gtcatcgtaaatttaacttagttggtatggacaatgcataatatat 318  Q
    |||||||| ||||||||| ||||| |||||||||||||||| ||||    
T  40874139 gtcatcgtgaatttaactcagttgatatggacaatgcataaaatat 40874094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 324
Target Start/End: Original strand, 44868419 - 44868464
Alignment:
Q  279 gtaaatttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||  ||||| || ||||||||||||||||||||||||    
T  44868419 gtaaatttaacacagttgataaggacaatgcataatatatgtaagg 44868464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 660870 - 660838
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  660870 agttggtatggacaatgcataatatatgcaagg 660838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 833117 - 833085
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  833117 agttggtatggacaatgcataatatatgcaagg 833085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 2429029 - 2429061
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||| ||||||||||||||||||||||||    
T  2429029 agttggtaaggacaatgcataatatatgtaagg 2429061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 4238772 - 4238804
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||| ||||||||||||||||||||||||||||    
T  4238772 agttagtatggacaatgcataatatatgtaagg 4238804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 4557819 - 4557787
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||| |||||||||||||||||||||||    
T  4557819 agttggtatagacaatgcataatatatgtaagg 4557787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 6765623 - 6765655
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||| ||||||||||    
T  6765623 agttggtatggacaatgcataaaatatgtaagg 6765655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 9383257 - 9383225
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  9383257 agttggtatggacaatgcataatatatgcaagg 9383225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 9547477 - 9547425
Alignment:
Q  272 agtcatcgtaaatttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||| |||  |||||| ||||| |||||||||||||||||||||| ||||    
T  9547477 agtcatcataagcttaactcagttgatatggacaatgcataatatatgcaagg 9547425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 13196693 - 13196745
Alignment:
Q  272 agtcatcgtaaatttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||| |||| || |||||| |||||||||| ||||||||||||||||| ||||    
T  13196693 agtcctcgtgaacttaactcagttggtatgaacaatgcataatatatgcaagg 13196745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 322
Target Start/End: Original strand, 15770805 - 15770833
Alignment:
Q  294 ttggtatggacaatgcataatatatgtaa 322  Q
    |||||||||||||||||||||||||||||    
T  15770805 ttggtatggacaatgcataatatatgtaa 15770833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 24548122 - 24548162
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||| | ||||||| |||||||||||||||||||||||    
T  24548122 tttaactcaattggtatagacaatgcataatatatgtaagg 24548162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 25598610 - 25598578
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  25598610 agttggtatggacaatgcataatatatgcaagg 25598578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 41859857 - 41859897
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||| |||||||||||||||||||||| ||||| ||||    
T  41859857 tttaactcagttggtatggacaatgcataaaatatgcaagg 41859897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 44488058 - 44488026
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||| ||||||||||||||||||||||||    
T  44488058 agttggtaaggacaatgcataatatatgtaagg 44488026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 27651585 - 27651546
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  27651585 ttaacttagttggtaaggacaatgcataatatatgtaagg 27651546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 325
Target Start/End: Complemental strand, 17239429 - 17239396
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaaggg 325  Q
    ||||||||||||||||||||||||||||||||||    
T  17239429 agttggtatggacaatgcataatatatgtaaggg 17239396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 4432109 - 4432161
Alignment:
Q  272 agtcatcgtaaatttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||| |||||| ||||||| ||||| || ||||||||||||||||||||||||    
T  4432109 agtcctcgtaagtttaactcagttgataaggacaatgcataatatatgtaagg 4432161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 26409266 - 26409298
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||||||||    
T  26409266 agttggtatggacaatgcataatatatgtaagg 26409298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 26655477 - 26655509
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||||||||    
T  26655477 agttggtatggacaatgcataatatatgtaagg 26655509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 26927062 - 26927094
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||||||||    
T  26927062 agttggtatggacaatgcataatatatgtaagg 26927094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 42515820 - 42515852
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||||||||    
T  42515820 agttggtatggacaatgcataatatatgtaagg 42515852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 324
Target Start/End: Original strand, 12190002 - 12190037
Alignment:
Q  289 cttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||||||||||||| ||||||||||||||||    
T  12190002 cttagttggtatggacaatacataatatatgtaagg 12190037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 324
Target Start/End: Complemental strand, 12909229 - 12909182
Alignment:
Q  277 tcgtaaatttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||| |||||| || |||||||||| ||||||||||||||||||||||    
T  12909229 tcgtgaatttagctcagttggtatgaacaatgcataatatatgtaagg 12909182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 318
Target Start/End: Original strand, 14124293 - 14124340
Alignment:
Q  271 tagtcatcgtaaatttaacttagttggtatggacaatgcataatatat 318  Q
    ||||| |||| || ||||||||||||||| ||||||||||||||||||    
T  14124293 tagtcttcgtgaacttaacttagttggtaaggacaatgcataatatat 14124340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 324
Target Start/End: Original strand, 24485709 - 24485744
Alignment:
Q  289 cttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||||||||||||||||||||||||| ||||    
T  24485709 cttagttggtatggacaatgcataatatatgcaagg 24485744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 29695021 - 29695060
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| ||||| |||||||||||||||||||||||||||    
T  29695021 ttaactcagttgatatggacaatgcataatatatgtaagg 29695060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 39290885 - 39290834
Alignment:
Q  92 tataagaaaaagttaaatcaacaaaagttaatgtatctaacaaaaaatttaa 143  Q
    ||||||| |||||  |||||||||||||||||||||||||  ||||||||||    
T  39290885 tataagagaaagtcgaatcaacaaaagttaatgtatctaattaaaaatttaa 39290834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 41650994 - 41650955
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  41650994 ttaactcagttggtatggacaatgcataatatatgcaagg 41650955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 322
Target Start/End: Original strand, 16188837 - 16188867
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaa 322  Q
    |||||||||||||||||||||||||||||||    
T  16188837 agttggtatggacaatgcataatatatgtaa 16188867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 322
Target Start/End: Original strand, 16188939 - 16188969
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaa 322  Q
    |||||||||||||||||||||||||||||||    
T  16188939 agttggtatggacaatgcataatatatgtaa 16188969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 319
Target Start/End: Original strand, 17046340 - 17046374
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatg 319  Q
    |||||| ||||||||||||||||||||||||||||    
T  17046340 ttaactcagttggtatggacaatgcataatatatg 17046374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 18749226 - 18749196
Alignment:
Q  289 cttagttggtatggacaatgcataatatatg 319  Q
    |||||||||||||||||||||||||||||||    
T  18749226 cttagttggtatggacaatgcataatatatg 18749196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 3389169 - 3389202
Alignment:
Q  286 taacttagttggtatggacaatgcataatatatg 319  Q
    ||||| ||||||||||||||||||||||||||||    
T  3389169 taactcagttggtatggacaatgcataatatatg 3389202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Complemental strand, 40027819 - 40027782
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaa 322  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  40027819 ttaactcagttggcatggacaatgcataatatatgtaa 40027782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 3575149 - 3575189
Alignment:
Q  85 tcttatatataagaaaaagttaaatcaacaaaagttaatgt 125  Q
    ||||||||||||||||||||| | |||||||||||| ||||    
T  3575149 tcttatatataagaaaaagttgagtcaacaaaagttgatgt 3575189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 7070922 - 7070962
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||||||| ||  |||||||||||||||||||||||    
T  7070922 tttaacttagttgatacagacaatgcataatatatgtaagg 7070962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 10199032 - 10199064
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||||||||||||||||||||| |||||    
T  10199032 agttggtatggacaatgcataatatatataagg 10199064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 10515558 - 10515598
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||| |||||||||| |||||||||| ||||    
T  10515558 tttaacttagttggaatggacaatgaataatatatgcaagg 10515598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 21316887 - 21316927
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||| |||||||| ||||||||||||||||||| ||||    
T  21316887 tttaactcagttggtaaggacaatgcataatatatgaaagg 21316927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 36162937 - 36162905
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||| ||||||||||||||||||||||    
T  36162937 agttggtatgaacaatgcataatatatgtaagg 36162905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 37932343 - 37932375
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  37932343 agttggtatggacaatgcataatatatgcaagg 37932375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 39143727 - 39143759
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||| ||||||||||||||||||    
T  39143727 agttggtatggacattgcataatatatgtaagg 39143759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 42505885 - 42505917
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  42505885 agttggtatggacaatgcataatatatgcaagg 42505917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 27432240 - 27432279
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  27432240 ttaacttagttggtatgtacaatgcataatatatgtaagg 27432279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 46903914 - 46903953
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  46903914 ttaactcagttggtatggacaatgcataatatatgtaagg 46903953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 7827513 - 7827553
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||| ||||| |||||||||||||||||||||||||||    
T  7827513 tttaactcagttgatatggacaatgcataatatatgtaagg 7827553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 7829901 - 7829941
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||| ||||| |||||||||||||||||||||||||||    
T  7829901 tttaactcagttgatatggacaatgcataatatatgtaagg 7829941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 328
Target Start/End: Original strand, 28093367 - 28093403
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaaggggtt 328  Q
    |||||||||||||||||||||||||||| ||||||||    
T  28093367 agttggtatggacaatgcataatatatgcaaggggtt 28093403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 2186482 - 2186443
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| |||||||||||||||| ||||||||||||||||    
T  2186482 ttaactcagttggtatggacaatacataatatatgtaagg 2186443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 315
Target Start/End: Complemental strand, 5293713 - 5293670
Alignment:
Q  272 agtcatcgtaaatttaacttagttggtatggacaatgcataata 315  Q
    |||| ||||||| |||||||||||||||| ||||||||||||||    
T  5293713 agtcctcgtaaacttaacttagttggtattgacaatgcataata 5293670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 7464546 - 7464507
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  7464546 ttaactcagttggtagggacaatgcataatatatgtaagg 7464507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 8747290 - 8747252
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  8747290 ttaacttagttggtatg-acaatgcataatatatgtaagg 8747252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 324
Target Start/End: Complemental strand, 17035976 - 17035929
Alignment:
Q  277 tcgtaaatttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||| |||||||||||||||||| ||| |||| |||||||||||||||    
T  17035976 tcgtgaatttaacttagttggtaaggataatgtataatatatgtaagg 17035929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 19468457 - 19468496
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  19468457 ttaactcagttggtatggacaatgcataatatatgcaagg 19468496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 324
Target Start/End: Original strand, 21245803 - 21245838
Alignment:
Q  289 cttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||||| ||||||||||||||||||||||||    
T  21245803 cttagttggtaaggacaatgcataatatatgtaagg 21245838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 38131014 - 38130975
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  38131014 ttaactcagttggtatggacaatgcataatatatgcaagg 38130975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 54018461 - 54018422
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  54018461 ttaacttagttggtatggacaatgcataaaatatgcaagg 54018422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 324
Target Start/End: Original strand, 8139726 - 8139760
Alignment:
Q  290 ttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||||| ||||    
T  8139726 ttagttggtatggacaatgcataatatatgcaagg 8139760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 19883081 - 19883127
Alignment:
Q  273 gtcatcgtaaatttaacttagttggtatggacaatgcataatatatg 319  Q
    |||||||| | |||||||||||||||||||| ||||||||| |||||    
T  19883081 gtcatcgtgagtttaacttagttggtatggataatgcataaaatatg 19883127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 322
Target Start/End: Original strand, 41087576 - 41087614
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaa 322  Q
    |||| ||||||||||| ||||||||||||||||||||||    
T  41087576 tttagcttagttggtaaggacaatgcataatatatgtaa 41087614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 44968183 - 44968221
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaag 323  Q
    |||||| |||||||||||||||||||||| |||||||||    
T  44968183 ttaactcagttggtatggacaatgcataaaatatgtaag 44968221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 46483257 - 46483287
Alignment:
Q  289 cttagttggtatggacaatgcataatatatg 319  Q
    |||||||||||||||||||||||||||||||    
T  46483257 cttagttggtatggacaatgcataatatatg 46483287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 319
Target Start/End: Complemental strand, 51882255 - 51882221
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatg 319  Q
    |||||| ||||||||||||||||||||||||||||    
T  51882255 ttaactcagttggtatggacaatgcataatatatg 51882221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Complemental strand, 52543747 - 52543710
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaa 322  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  52543747 ttaacttagttggtaggaacaatgcataatatatgtaa 52543710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 977989 - 977957
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  977989 agttggtatggacaatgcataatatatgcaagg 977957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 10498743 - 10498711
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  10498743 agttggtatggacaatgcataatatatgcaagg 10498711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 19126725 - 19126693
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||| ||||||||||    
T  19126725 agttggtatggacaatgcataaaatatgtaagg 19126693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 23332656 - 23332692
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgta 321  Q
    |||||||||||| |||| |||||||||||||||||||    
T  23332656 ttaacttagttgatatgaacaatgcataatatatgta 23332692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 25441548 - 25441516
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  25441548 agttggtatggacaatgcataatatatgcaagg 25441516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 25874136 - 25874176
Alignment:
Q  285 ttaacttagttggtatggacaatgcataat-atatgtaagg 324  Q
    |||||| ||||||||||||||||||||||| ||||||||||    
T  25874136 ttaactcagttggtatggacaatgcataataatatgtaagg 25874176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 26610548 - 26610509
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||| |||||||| ||||||||||||||||||||||||    
T  26610548 tttaactcagttggta-ggacaatgcataatatatgtaagg 26610509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 27397668 - 27397628
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||| ||||||||||||||||| |||||||||| ||||    
T  27397668 tttaactcagttggtatggacaatgtataatatatgcaagg 27397628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 29631199 - 29631231
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  29631199 agttggtatggacaatgcataatatatgcaagg 29631231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 42269311 - 42269343
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||| ||||||||||||||||||||||||||||    
T  42269311 agttagtatggacaatgcataatatatgtaagg 42269343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 45254244 - 45254276
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||| ||||||||||||||||||||||||    
T  45254244 agttggtaaggacaatgcataatatatgtaagg 45254276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 53996312 - 53996344
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  53996312 agttggtatggacaatgcataatatatgcaagg 53996344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000005; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 20205820 - 20205865
Alignment:
Q  277 tcgtaaatttaacttagttggtatggacaatgcataatatatgtaa 322  Q
    |||||| |||| || |||||||||||||||||||||||||||||||    
T  20205820 tcgtaagtttagctcagttggtatggacaatgcataatatatgtaa 20205865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 19599150 - 19599190
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||| |||||||||||||||||||||||||||| ||||    
T  19599150 tttaactcagttggtatggacaatgcataatatatgcaagg 19599190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 30857253 - 30857293
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||| ||||||||||||||||||||||||||||||| ||||    
T  30857253 tttagcttagttggtatggacaatgcataatatatgcaagg 30857293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 3584210 - 3584249
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  3584210 ttaacttagttggtaaggacaatgcataatatatgcaagg 3584249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 5041345 - 5041384
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  5041345 ttaactgagttggtatggacaatgcataatatatgcaagg 5041384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 324
Target Start/End: Complemental strand, 19684271 - 19684228
Alignment:
Q  281 aaatttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||| ||||| ||| |||||||||||||||||||||||    
T  19684271 aaatttaactcagttgatatagacaatgcataatatatgtaagg 19684228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 324
Target Start/End: Complemental strand, 21099836 - 21099789
Alignment:
Q  277 tcgtaaatttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||| |||||| || ||||||||||||||||||||||||||| |||||    
T  21099836 tcgtgaatttagctcagttggtatggacaatgcataatatatataagg 21099789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 21928173 - 21928134
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  21928173 ttaacttagttggtatggacaatgcataatttatgcaagg 21928134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 22991446 - 22991407
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  22991446 ttaactcagttggtatggacaatgcataatatatgcaagg 22991407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 23413101 - 23413062
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  23413101 ttaactcagttggtatggacaatgcataatatatgcaagg 23413062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 27263347 - 27263386
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  27263347 ttaactcagttggtatggacaatgcataatatatgcaagg 27263386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 27270241 - 27270280
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  27270241 ttaactcagttggtatggacaatgcataatatatgcaagg 27270280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 34448665 - 34448626
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| ||||||| |||||||||||||||||||||||||    
T  34448665 ttaactcagttggtttggacaatgcataatatatgtaagg 34448626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 40187691 - 40187652
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  40187691 ttaactcagttggtagggacaatgcataatatatgtaagg 40187652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 324
Target Start/End: Original strand, 41527570 - 41527605
Alignment:
Q  289 cttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||||||||||||||||||||||||| ||||    
T  41527570 cttagttggtatggacaatgcataatatatgcaagg 41527605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 292 - 323
Target Start/End: Complemental strand, 43346612 - 43346581
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaag 323  Q
    ||||||||||||||||||||||||||||||||    
T  43346612 agttggtatggacaatgcataatatatgtaag 43346581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 324
Target Start/End: Complemental strand, 44770206 - 44770159
Alignment:
Q  277 tcgtaaatttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||| |||||| |||||||||||||||||||||| ||||| ||||    
T  44770206 tcgtaaacttaactcagttggtatggacaatgcataaaatatgaaagg 44770159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 324
Target Start/End: Original strand, 7908588 - 7908638
Alignment:
Q  274 tcatcgtaaatttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||| ||||  | |||||||||||||||||||||| ||||||||||    
T  7908588 tcatcgtaagtttagttcagttggtatggacaatgcataaaatatgtaagg 7908638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 319
Target Start/End: Original strand, 39043761 - 39043795
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatatatg 319  Q
    |||||| ||||||||||||||||||||||||||||    
T  39043761 ttaactcagttggtatggacaatgcataatatatg 39043795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 1399167 - 1399207
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||| |||||||||||||||||||| ||||||| ||||    
T  1399167 tttaactcagttggtatggacaatgcatgatatatgcaagg 1399207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 10244740 - 10244772
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  10244740 agttggtatggacaatgcataatatatgcaagg 10244772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 322
Target Start/End: Original strand, 10953560 - 10953608
Alignment:
Q  274 tcatcgtaaatttaacttagttggtatggacaatgcataatatatgtaa 322  Q
    ||||||||| ||||||| ||||||| || ||||||||||||||| ||||    
T  10953560 tcatcgtaagtttaactcagttggtttgcacaatgcataatatacgtaa 10953608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 317
Target Start/End: Complemental strand, 23863755 - 23863723
Alignment:
Q  285 ttaacttagttggtatggacaatgcataatata 317  Q
    ||||||||||||||| |||||||||||||||||    
T  23863755 ttaacttagttggtaaggacaatgcataatata 23863723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 27462484 - 27462452
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  27462484 agttggtatggacaatgcataatatatgcaagg 27462452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 27833449 - 27833417
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||| ||||||||||||||||||||||||    
T  27833449 agttggtaaggacaatgcataatatatgtaagg 27833417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 37624556 - 37624588
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  37624556 agttggtatggacaatgcataatatatgcaagg 37624588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 42043114 - 42043082
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||||||||||||||||||||||| |||||    
T  42043114 agttggtatggacaatgcataatatatttaagg 42043082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 44558822 - 44558790
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  44558822 agttggtatggacaatgcataatatatgcaagg 44558790  T

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Target: scaffold0567 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 7587 - 7555
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  7587 agttggtatggacaatgcataatatatgcaagg 7555  T

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Target: scaffold0350 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 1261 - 1293
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    ||||| |||||||||||||||||||||||||||    
T  1261 agttgatatggacaatgcataatatatgtaagg 1293  T

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Target: scaffold0122 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 14242 - 14202
Alignment:
Q  284 tttaacttagttggtatggacaatgcataatatatgtaagg 324  Q
    ||||||| |||||||||| ||||||||||||||||| ||||    
T  14242 tttaactcagttggtatgaacaatgcataatatatgcaagg 14202  T

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Target: scaffold0118 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 40011 - 40043
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  40011 agttggtatggacaatgcataatatatgcaagg 40043  T

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Target: scaffold0038 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 109146 - 109178
Alignment:
Q  292 agttggtatggacaatgcataatatatgtaagg 324  Q
    |||||||||||||||||||||||||||| ||||    
T  109146 agttggtatggacaatgcataatatatgcaagg 109178  T

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