View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18837_low_23 (Length: 277)
Name: NF18837_low_23
Description: NF18837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18837_low_23 |
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Alignment Details
Target: chr2 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 7545049 - 7545314
Alignment:
| Q |
1 |
catcatataaagaacggggatattgtaaaaccggattggttctagaacaattcctttacatttatgttttgatgattacaaagcatgataaaaatttata |
100 |
Q |
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| T |
7545049 |
catcatataaagaacggggatattgtaaaaccggattggttctagaacaattcctttacatttatgttttgatgattacaaagcatgataaaaatttata |
7545148 |
T |
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| Q |
101 |
aactaactgtttgctggagtgtgcaggtcgagtccgataagatggaaatttcttagttgttcctctagaatgaaatctcaattaagtataacacatgctt |
200 |
Q |
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| T |
7545149 |
aactaactgtttgctggagtgtgcaggtcgagtccgataagatggaaatttcttagttgttcctctagaatgaaatctcaattaagtataacacatgctt |
7545248 |
T |
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| Q |
201 |
atacacatccttcattcggaaggctccatgaaagcataaaccaagcatccagattaagtcatattc |
266 |
Q |
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| T |
7545249 |
atacacatccttcattcggaaggctccatgaaagcataaaccaagcatccagattaagtcatattc |
7545314 |
T |
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