View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18837_low_24 (Length: 274)
Name: NF18837_low_24
Description: NF18837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18837_low_24 |
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Alignment Details
Target: chr1 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 12 - 255
Target Start/End: Complemental strand, 36753824 - 36753581
Alignment:
| Q |
12 |
atgaatggtagtctttcgtgaaagtcagggatgtgtcacttttcttcttgttggcactggtagtggtagtagtaaataattccctcattttcacgtagct |
111 |
Q |
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| T |
36753824 |
atgattggcagtctttcgtgaaagtcagggatgtgtcacttttcttcttgttggcactggtagtagtagtagtaaataattccctcattttcacgtagct |
36753725 |
T |
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| Q |
112 |
atgctttaacacaaccaaggacaaacattgatgtgtatagtgattcattaattggagttggcagacttagatatttatatattgatacgaaaatcggcat |
211 |
Q |
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| T |
36753724 |
atgctttaacacaaccaaggacaaacattgatgtgtatagtgattcattaattggagttggcagacttagatatttatatatcgatacgaaaatcggcat |
36753625 |
T |
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| Q |
212 |
gaaaaagaatcggatacgaaactctgaggagtagaacacttcaa |
255 |
Q |
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| T |
36753624 |
cagaaagaatcggatatgaaactctgaggagtagaacacttcaa |
36753581 |
T |
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