View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18839_high_17 (Length: 252)
Name: NF18839_high_17
Description: NF18839
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18839_high_17 |
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Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 29136756 - 29136992
Alignment:
| Q |
1 |
ccgaccataattcagtactgattattggaatgtacaaaccagcataatttacatatataataattaattgacagtgtagtagtgtactactgtctcagtt |
100 |
Q |
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| T |
29136756 |
ccgaccataattcagtactgattattggaatgtacaaaccagcataatttacatatataataattaattgacagtgtagtagtgtactactgtctcagtt |
29136855 |
T |
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| Q |
101 |
tatagtaatggcaaaacaccaagctaaaggattttgcatcttcaataaaaatgttaccgagtttaggagaactgagagcaacaactaactaaagataagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29136856 |
tatagtaatggcaaaacaccaagctaaaggattttgcatcttcaataaaaatgttaccgagtttaggagaactgagagcaacaactaactaaagataagt |
29136955 |
T |
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| Q |
201 |
tcaattcgttttcttacataaagaaaagcatgaaaat |
237 |
Q |
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||||||||||||| |||||||||||||||||||||| |
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| T |
29136956 |
acaattcgttttctaacataaagaaaagcatgaaaat |
29136992 |
T |
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