View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18839_high_5 (Length: 501)
Name: NF18839_high_5
Description: NF18839
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18839_high_5 |
 |  |
|
| [»] scaffold0088 (1 HSPs) |
 |  |  |
|
| [»] scaffold0009 (1 HSPs) |
 |  |  |
|
| [»] scaffold0007 (1 HSPs) |
 |  |  |
|
| [»] scaffold0047 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr8 (Bit Score: 64; Significance: 9e-28; HSPs: 13)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 9225234 - 9225333
Alignment:
| Q |
4 |
atgtcgaagaatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagtta |
103 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
9225234 |
atgtcaaataatatctaaaaaacttatttatgtgtaaaccctgttaaaatattttaaataaaatgtatcccgtgcttggcacggggcgttacactagtta |
9225333 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 39617211 - 39617123
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
39617211 |
aatatctaaaaaacttatctatatgtaaaccctgttaaaaaaatttaaataaaatgtatcccgtgcttggcacggggcgttacactagt |
39617123 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 12498076 - 12497989
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
12498076 |
aatatctaaaaaacttatttatgtgtaaacc-tgttaaattgttttatataaaatgtatcccgtgcttggcacggggcgttacactagt |
12497989 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 18380660 - 18380577
Alignment:
| Q |
20 |
aaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaa-taaaatgtatcccgtgcttggcacggggtgttacactagtt |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
18380660 |
aaaaaacttatttatgtgtaaaccctgttaaaaaaaatttaaataaaatgtatcccgtgcttggcacggggcgttacactagtt |
18380577 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 6421683 - 6421775
Alignment:
| Q |
20 |
aaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaa-taaaatgtatcccgtgcttggcacggggtgttacactagttatctacatt |
111 |
Q |
| |
|
||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||| ||||||||||| || |||||| |
|
|
| T |
6421683 |
aaaaaacttatttatgtgtaaactctgttaaaaaaaatttaaataaaatgtatcccgtgcttggcacggggcgttacactagtaatatacatt |
6421775 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 60 - 102
Target Start/End: Original strand, 40560562 - 40560604
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagtt |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
40560562 |
aataaaatgtatcccgtgcttggcacggggcgttacactagtt |
40560604 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 13276728 - 13276687
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
13276728 |
aataaaatgtatcccgtgcttggcacggggcgttacactagt |
13276687 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 110
Target Start/End: Complemental strand, 36892647 - 36892597
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagttatctacat |
110 |
Q |
| |
|
|||||||||||||||||| ||||||||||| ||||||| |||||| ||||| |
|
|
| T |
36892647 |
aataaaatgtatcccgtgtttggcacggggcgttacaccagttatttacat |
36892597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 16431318 - 16431359
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
16431318 |
aataaaatgtatcccgtgcttggcacgggacgttacactagt |
16431359 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 16881290 - 16881249
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
16881290 |
aataaaatgaatcccgtgcttggcacgggaagttacactagt |
16881249 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 22516985 - 22517025
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
22516985 |
aataaaatgtatcccgtgcttggcac-gggcgttacactagt |
22517025 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 29073992 - 29073951
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
29073992 |
aataaaatgaatcccgtgcttggcacgggaagttacactagt |
29073951 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 33444424 - 33444465
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||| |||| |||||||||||| ||||||||||| |
|
|
| T |
33444424 |
aataaaatgtattccgtacttggcacggggcgttacactagt |
33444465 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 64; Significance: 9e-28; HSPs: 19)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 41400431 - 41400340
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagttat |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
41400431 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaaaaaatttaaataaaatgtatcccgtgcttggcacggggcgttacactagttat |
41400340 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 45542187 - 45542275
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
45542187 |
aatatctaaaaaacttatttatgtgtaaaccctattaaaacattttaaataaaatgtatcccgtgcttggcacggggcgttacactagt |
45542275 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 21327489 - 21327399
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagtta |
103 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
21327489 |
aatatctaaaaaacgtatttatgtgtaaaccctgttaaaacattttaaataaaatgtatcccgtgcttggcacggggcgttatactagtta |
21327399 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 2028595 - 2028683
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
2028595 |
aatatctaaaaaacgtatttatgtgtaaaccctgttaaaacattttaaataaaatgtatcccgtgcttggcacggggcgttatactagt |
2028683 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 18415313 - 18415404
Alignment:
| Q |
20 |
aaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaa-taaaatgtatcccgtgcttggcacggggtgttacactagttatctacat |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
18415313 |
aaaaaacttatttatgtgtaaaccctgttaaattttttttaaataaaatgtatcccgtgcttggcacggggcgttacactagttatcaacat |
18415404 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 49008948 - 49009029
Alignment:
| Q |
20 |
aaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
49008948 |
aaaaaacttatttatgtgtaaaccctgttaaaacattttaaataaaatgtatcccgtgcttggcacggggcattacactagt |
49009029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 2844668 - 2844755
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
2844668 |
aatatctaaaaaacttatttatgtgtaatctctgttaaaaaattta-aataaaatgtatcccgtgcttggcacggggcgttacactagt |
2844755 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 32519055 - 32518972
Alignment:
| Q |
20 |
aaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaa-taaaatgtatcccgtgcttggcacggggtgttacactagtt |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
32519055 |
aaaaaacttatttatgtgtaaaccctgttaaaaaaaatttaaataaaatgtatcccgtgcttggcacggggcgttacactagtt |
32518972 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 28640884 - 28640795
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagtt |
102 |
Q |
| |
|
|||||||||||||||||| ||| | |||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
28640884 |
aatatctaaaaaacttatctatttttaaaccctgttaaaaaaatttaaataaaatgtatcccgtacttggcacggggcgttacactagtt |
28640795 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 8111465 - 8111547
Alignment:
| Q |
20 |
aaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagtt |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||| ||| |||||||| |
|
|
| T |
8111465 |
aaaaaacttatttatgtgtaaaccctgttaaacatatttaaataaaatgtatctcatgcttggcacggggcgttgcactagtt |
8111547 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 24780642 - 24780723
Alignment:
| Q |
20 |
aaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
24780642 |
aaaaaacttatttatgcataaaccctgttaaaaaaatttaaataaaatgtatcctgtgcttggcacggggcgttacactagt |
24780723 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 16662032 - 16661991
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
16662032 |
aataaaatgtatcccgtgcttggcacggggcgttacactagt |
16661991 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 38297049 - 38297090
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
38297049 |
aataaaatgtatcccgtgcttggcacggggcgttacactagt |
38297090 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 42438824 - 42438865
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
42438824 |
aataaaatgtatcccgtgcttggcacggggcgttacactagt |
42438865 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 38980416 - 38980336
Alignment:
| Q |
20 |
aaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||| |||||| |||||||| |||||||| ||||||||||||| ||||||| ||||||||||| |
|
|
| T |
38980416 |
aaaaaacttatttatgggtaaactctgttaaaaaattta-aataaaatatatcccgtgcttgacacggggcgttacactagt |
38980336 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 13499688 - 13499729
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||||||||| | |||| |||||| |
|
|
| T |
13499688 |
aataaaatgtatcccgtgcttggcacggagcgttatactagt |
13499729 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 20279593 - 20279634
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
20279593 |
aataaaatgaatcccgtgcttggcacgggaagttacactagt |
20279634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 24452329 - 24452288
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
24452329 |
aataaaatatatcccgtgcttggcacgggacgttacactagt |
24452288 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 32052906 - 32052947
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||| |||||| ||||||||||| |
|
|
| T |
32052906 |
aataaaatgtatcccgtgcttgacacgggacgttacactagt |
32052947 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 61; Significance: 6e-26; HSPs: 17)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 39560472 - 39560384
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
39560472 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaaacattttaaataaaatgtatcccgtgcttggcacggggcgttacactagt |
39560384 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 22493797 - 22493708
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagtt |
102 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
22493797 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaaaaaatttaaataaaatgtatcccgtgcttagcacggggcgttacactagtt |
22493708 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 40835810 - 40835898
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
40835810 |
aatatctaaaaaacgtatttatgtgtaaaccctgttaaaacattttaaataaaatgtatcccgtgcttggcacggggcgttacactagt |
40835898 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 1593865 - 1593774
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagttat |
104 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
1593865 |
aatatctaaaaaacgtatttatgtgtaaacccttttaaaacattttaaataaaatgtatcccgtgcttggcacggggcgttacactagttat |
1593774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 5807651 - 5807563
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
5807651 |
aatatctaaaaaacttatctatgtgtaaaccctgttaaaaaaatttaaataaaatgtatctcgtgcttggcacggggcgttacactagt |
5807563 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 16485715 - 16485802
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
16485715 |
aatatctaaaaaacttatt-atgtgtaaaccctgttaaaatattttaaataaaatgtatcccgtgcttggcacggggcgttacactagt |
16485802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 39005653 - 39005739
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacacta |
99 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
39005653 |
aatatttaaaaaacttatttatgtgtaaaccctgttaaaaaaatttaaataaaatgtatcccgtacttggcacggggcgttacacta |
39005739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 16483275 - 16483357
Alignment:
| Q |
20 |
aaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaa-taaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
16483275 |
aaaaaacttatttatgtgtaaacctagttaaaaaaaatttaaataaaatgtatcccgtgcttggcacggggcgttacactagt |
16483357 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 60 - 102
Target Start/End: Complemental strand, 23104672 - 23104630
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagtt |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
23104672 |
aataaaatgtatcccgtgcttggcacggggcgttacactagtt |
23104630 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 25340113 - 25340154
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
25340113 |
aataaaatgtatcccgtgcttggcacggggcgttacactagt |
25340154 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 28907585 - 28907544
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
28907585 |
aataaaatgtatcccgtgcttggcacggggcgttacactagt |
28907544 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 28943980 - 28943939
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
28943980 |
aataaaatgtatcccgtgcttggcacggggcgttacactagt |
28943939 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 1209815 - 1209774
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
1209815 |
aataaaatgtatcccgtgcttggcacgggacgttacactagt |
1209774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 36786660 - 36786619
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
36786660 |
aataaaatatatcccgtgcttggcacggggcgttacactagt |
36786619 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 22383946 - 22383866
Alignment:
| Q |
21 |
aaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
||||||||| |||||||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
22383946 |
aaaaacttaattatgtgtaaaccccgttaattttttttaaataaaatgaatcccgtgcttggcacgggaagttacactagt |
22383866 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 14459026 - 14459067
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
||||||||||||||||||||||||||| || || |||||||| |
|
|
| T |
14459026 |
aataaaatgtatcccgtgcttggcacgaggcgtaacactagt |
14459067 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 22718568 - 22718527
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
||||||||||||||||| ||||||||| || ||||||||||| |
|
|
| T |
22718568 |
aataaaatgtatcccgtacttggcacgaggcgttacactagt |
22718527 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 1244808 - 1244720
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
1244808 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaaaaaatttaaataaaatgtatcccgtgcttggcacgaggcgttacactagt |
1244720 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 27019603 - 27019513
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcac-ggggtgttacactagtt |
102 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||| |
|
|
| T |
27019603 |
aatatctaataaacttatttatgtgtaaaccctgttaaaaaaatttaaataaaatgtatctcgtgcttggcacgggggtgttacactagtt |
27019513 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 39296644 - 39296724
Alignment:
| Q |
20 |
aaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactag |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
39296644 |
aaaaaacttatttatgtgtaaaccctattaaaacattttaaataaaatgtatcccgtgcttggcacggggcgttacactag |
39296724 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 48430194 - 48430282
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
48430194 |
aatatctaaaaaacttatttatgtgtaaaccatgttaaaatattttaaataaaatgtatcccgtgcttggcacatggcgttacactagt |
48430282 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 7512596 - 7512648
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagttatctacattt |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
7512596 |
aataaaatgtatcccgtgcttggcacggggcgttacactagttatatacattt |
7512648 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 5948965 - 5949047
Alignment:
| Q |
20 |
aaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaa-taaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
5948965 |
aaaaaacttatttatgtgtaaaccctgttaaaaaaaatttaaataaaatgtatcccgtgcttggcacgggacgttacactagt |
5949047 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 4946332 - 4946373
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4946332 |
aataaaatgtatcccgtgcttggcacggggcgttacactagt |
4946373 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 6248298 - 6248255
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagtta |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
6248298 |
aataaaatgtatcccgtgcttggcacggggcattacactagtta |
6248255 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 9765514 - 9765473
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
9765514 |
aataaaatatatcccgtgcttggcacggggcgttacactagt |
9765473 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 27074189 - 27074230
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
27074189 |
aataaaatgtatcccgtgcttggcacgggacgttacactagt |
27074230 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 27154280 - 27154321
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
27154280 |
aataaaatgtatcccgtgcttggcacgggacgttacactagt |
27154321 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 34807058 - 34807095
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaa |
50 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
34807058 |
aatatctaaaaaacttatttatgtgtaaactctgttaa |
34807095 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 54; Significance: 8e-22; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 46809808 - 46809897
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagtt |
102 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
46809808 |
aatatctaaaaaacttatctatgtataaaccctgttaaaaaaatttaaataaaatgtatcccgtgcttggcacggggcgttacactagtt |
46809897 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 21949153 - 21949070
Alignment:
| Q |
20 |
aaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagtta |
103 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
21949153 |
aaaaaacttatttatgtgtaaatcctgttaaaattttttaaataaaatgtatcccgtgcttggcacggggcgttacactagtta |
21949070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 6617799 - 6617886
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
6617799 |
aatatctaaaaaacttatt-atgtgtaaaccctgataaaatattttaaataaaatgtatcccgtgcttggcacggggcgttacactagt |
6617886 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 31078795 - 31078711
Alignment:
| Q |
20 |
aaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagttat |
104 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| ||||||||||||| |||| ||||||||||| |||||||||||||| |
|
|
| T |
31078795 |
aaaaaacttatttatgtgtaaaccttgttaaaaaattataaataaaatgtatctcgtggttggcacggggcgttacactagttat |
31078711 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 34637795 - 34637713
Alignment:
| Q |
20 |
aaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaa-taaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
34637795 |
aaaaaacttatttatgtgtaaaccctgttaaaaaaaatttaaataaaatgtatcccgtgcttggcacgggacgttacactagt |
34637713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 42054404 - 42054486
Alignment:
| Q |
20 |
aaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaa-taaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
42054404 |
aaaaaacttatttatgtgtaaacccagttaaaaaaaatttaaataaaatgtatcccgtgcttggcacggggcgttacactagt |
42054486 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 60 - 102
Target Start/End: Complemental strand, 44042530 - 44042488
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagtt |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
44042530 |
aataaaatgtatcccgtgcttggcacggggcgttacactagtt |
44042488 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 18781604 - 18781563
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
18781604 |
aataaaatgtatcccgtgcttggcacggggcgttacactagt |
18781563 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 60 - 99
Target Start/End: Original strand, 35508001 - 35508040
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacacta |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
35508001 |
aataaaatgtatcccgtgcttggcacggggcgttacacta |
35508040 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 35116493 - 35116534
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
35116493 |
aataaaatgtatcccgtgcttgacacggggcgttacactagt |
35116534 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 37313069 - 37313028
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
37313069 |
aataaaatgtatcccgtgcttgacacggggcgttacactagt |
37313028 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 105
Target Start/End: Complemental strand, 9174193 - 9174102
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagttatc |
105 |
Q |
| |
|
|||| ||||||||||||||||||| |||||||||||||| |||||||| |||||||| |||||||||| ||| ||||||||||| |
|
|
| T |
9174193 |
aatacctaaaaaacttatttatgtataaaccctgttaaa-aaatttaaataaaatatatcccgtatatggcacggggcgtttcactagttatc |
9174102 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 102
Target Start/End: Complemental strand, 47397692 - 47397650
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagtt |
102 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
47397692 |
aataaaatgaatcccgtgcttggcacgggaagttacactagtt |
47397650 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 54; Significance: 8e-22; HSPs: 13)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 4061700 - 4061612
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagtt |
102 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
4061700 |
aatatctaaaaaacttatt-atgtgtaaaccctgttaaaatattttaaataaaatgtatcccgtgcttggcacggggcgttacactagtt |
4061612 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 22403145 - 22403226
Alignment:
| Q |
20 |
aaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
22403145 |
aaaaaacttatttatgtgtaaaccctgttaaaacattttaaataaaatgtatcccgtgcttggcacggggcgttacactagt |
22403226 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 37969945 - 37970033
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagtt |
102 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
37969945 |
aatatctaaaaaacttatt-atgtgtaaaccctgttaaaatattttaaataaaatgtatcccgtgcttggcacggggcgttacactagtt |
37970033 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 3335260 - 3335179
Alignment:
| Q |
20 |
aaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
3335260 |
aaaaaacttatttatgtgtaaaccctgttaaaaaagtttaaataaaatgtatcccgtgcttggcacgaggcgttacactagt |
3335179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 28413378 - 28413297
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgtta |
94 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||| |||| |
|
|
| T |
28413378 |
aatatttaaaaaacttatttatgtgtaaaccctgttaaaatattttaaataaaatgtatctcgtgtttggcacggggcgtta |
28413297 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 33950999 - 33950910
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagtt |
102 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| |||||||| |||| || |||||||||||| |
|
|
| T |
33950999 |
aatatctaaaaaacttatttatgtgcaaaccttgttaaaacattttaaataaaatgtatctcgtgcttgacacgaggcgttacactagtt |
33950910 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 60 - 102
Target Start/End: Complemental strand, 35347794 - 35347752
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagtt |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
35347794 |
aataaaatgtatcccgtgcttggcacggggcgttacactagtt |
35347752 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 10118789 - 10118748
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
10118789 |
aataaaatgtatcccgtgcttggcacggggcgttacactagt |
10118748 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 102
Target Start/End: Original strand, 43847952 - 43847994
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagtt |
102 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
43847952 |
aataaaatgtatcccgtgcttgacacggggcgttacactagtt |
43847994 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 54613304 - 54613347
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagtta |
103 |
Q |
| |
|
||||||||||||||| |||||| ||||||| ||||||||||||| |
|
|
| T |
54613304 |
aataaaatgtatcccatgcttgacacggggcgttacactagtta |
54613347 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 23305494 - 23305535
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
23305494 |
aataaaatgaatcccgtgcttggcacgggaagttacactagt |
23305535 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 26702587 - 26702550
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacac |
97 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
26702587 |
aataaaatgtatcccgtgcttggcacgggacgttacac |
26702550 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 38187547 - 38187506
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||| |||||| ||||||||||| |
|
|
| T |
38187547 |
aataaaatgtatcccgtgcttgacacgggacgttacactagt |
38187506 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 53; Significance: 3e-21; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 15152969 - 15152881
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
15152969 |
aatatctaaaaaacttatttatgtgtaaaccatgttaaaaaaatttaaataaaatgtatcccgtgcttggcacggggcgttatactagt |
15152881 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 18898200 - 18898118
Alignment:
| Q |
20 |
aaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaa-taaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
18898200 |
aaaaaacttatttatgtgtaaaccctgttaaaaaaattttaaataaaatgtatcccgtgcttggcacggggcgttacactagt |
18898118 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 9699971 - 9699928
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagtta |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
9699971 |
aataaaatgtatcccgtgcttggcacggggcgttacactagtta |
9699928 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 4268607 - 4268566
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4268607 |
aataaaatgtatcccgtgcttggcacggggcgttacactagt |
4268566 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 22515302 - 22515391
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagtt |
102 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||| |||||||| ||| |||||||| |
|
|
| T |
22515302 |
aatatctaaaaaacttatttatgtataaaccctgttaaaaaaatttaaataaaatgtatcacgtgccaagcacggggggttgcactagtt |
22515391 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 102
Target Start/End: Complemental strand, 1424604 - 1424562
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagtt |
102 |
Q |
| |
|
|||||||| ||||||||||||||||||||| |||||| ||||| |
|
|
| T |
1424604 |
aataaaatatatcccgtgcttggcacggggcgttacattagtt |
1424562 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 14183123 - 14183164
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
||||||||||||||||| ||||||||| || ||||||||||| |
|
|
| T |
14183123 |
aataaaatgtatcccgtacttggcacgaggcgttacactagt |
14183164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0088 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0088
Description:
Target: scaffold0088; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 26463 - 26545
Alignment:
| Q |
20 |
aaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggcacggggtgttacactagtt |
102 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
26463 |
aaaaaatttattcatgtgtaaaccctgttaaaaaaatttaaataaaatgtatcccgtgcttggcacggggcgttacactagtt |
26545 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 193957 - 193875
Alignment:
| Q |
20 |
aaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaa-taaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
193957 |
aaaaaacttatttatgtgtaaaccctgttaaaaaaaatttaaataaaatgtatcccgtgcttggcacggggcgttacactagt |
193875 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 40268530 - 40268600
Alignment:
| Q |
13 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaannnnnnnnaataaaatgtatcccgtgcttggc |
83 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
40268530 |
aatatctaaaaaacttatttatgtgtaaaccctgttaaaaaaatttaaataaaatatatcccgtgcttggc |
40268600 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 12253633 - 12253590
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagtta |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
12253633 |
aataaaatgtatcccgtgcttggcacggggcgttacactagtta |
12253590 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 39118968 - 39118927
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
39118968 |
aataaaatgtatcccgtgcttggcacggggcgttacactagt |
39118927 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 42839956 - 42839915
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
42839956 |
aataaaatgtatcccgtgcttggcacggggcgttacactagt |
42839915 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 4647266 - 4647225
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
4647266 |
aataaaatatatcccgtgcttggcacggggcgttacactagt |
4647225 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 102
Target Start/End: Original strand, 6909152 - 6909194
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagtt |
102 |
Q |
| |
|
|||| |||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
6909152 |
aatataatgtatctcgtgcttggcacggggcgttacactagtt |
6909194 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 42227260 - 42227301
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
42227260 |
aataaaatgaatcccgtgcttggcacgggaagttacactagt |
42227301 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 14249 - 14290
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
14249 |
aataaaatgtatcccgtgcttggctcggggagttacactagt |
14290 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0047 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0047
Description:
Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 50647 - 50606
Alignment:
| Q |
60 |
aataaaatgtatcccgtgcttggcacggggtgttacactagt |
101 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
50647 |
aataaaatgaatcccgtgcttggcacgggaagttacactagt |
50606 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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