View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1883_high_10 (Length: 371)

Name: NF1883_high_10
Description: NF1883
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1883_high_10
NF1883_high_10
[»] chr2 (35 HSPs)
chr2 (101-266)||(40115630-40115811)
chr2 (101-172)||(45202017-45202088)
chr2 (101-171)||(11828706-11828776)
chr2 (101-171)||(35007987-35008057)
chr2 (101-171)||(35705803-35705873)
chr2 (101-170)||(22296016-22296085)
chr2 (295-355)||(40115841-40115901)
chr2 (101-169)||(43205208-43205276)
chr2 (101-172)||(27529642-27529713)
chr2 (101-171)||(35203635-35203705)
chr2 (101-169)||(27538820-27538888)
chr2 (110-170)||(38778015-38778075)
chr2 (101-169)||(41156891-41156959)
chr2 (115-170)||(28679256-28679311)
chr2 (107-169)||(26387719-26387781)
chr2 (115-172)||(37064187-37064244)
chr2 (110-170)||(8757668-8757728)
chr2 (101-169)||(13881210-13881278)
chr2 (101-169)||(14021335-14021403)
chr2 (110-170)||(16463416-16463476)
chr2 (101-169)||(23141469-23141537)
chr2 (101-169)||(23553259-23553327)
chr2 (101-169)||(30340109-30340177)
chr2 (110-170)||(35518399-35518459)
chr2 (114-169)||(12257029-12257084)
chr2 (105-171)||(11152585-11152651)
chr2 (101-159)||(17999859-17999917)
chr2 (112-169)||(35798335-35798392)
chr2 (114-169)||(5852586-5852641)
chr2 (120-175)||(43515025-43515080)
chr2 (105-160)||(44897745-44897800)
chr2 (101-166)||(6885371-6885436)
chr2 (114-169)||(34141571-34141626)
chr2 (101-169)||(1151644-1151712)
chr2 (101-169)||(38533086-38533154)
[»] chr8 (30 HSPs)
chr8 (101-171)||(22836025-22836095)
chr8 (101-171)||(41776290-41776360)
chr8 (101-172)||(37471758-37471829)
chr8 (105-171)||(21649056-21649122)
chr8 (105-171)||(22203101-22203167)
chr8 (101-171)||(23709091-23709161)
chr8 (100-170)||(10591760-10591830)
chr8 (101-170)||(33692836-33692905)
chr8 (114-170)||(18550107-18550163)
chr8 (101-175)||(1422584-1422658)
chr8 (101-171)||(1646371-1646441)
chr8 (101-170)||(32777998-32778066)
chr8 (114-170)||(25430774-25430830)
chr8 (101-175)||(8233378-8233452)
chr8 (101-171)||(42651035-42651105)
chr8 (105-170)||(23265240-23265305)
chr8 (115-171)||(28713222-28713278)
chr8 (115-171)||(28720569-28720625)
chr8 (115-171)||(28728211-28728267)
chr8 (101-169)||(34247889-34247957)
chr8 (127-173)||(40570649-40570695)
chr8 (101-154)||(6243149-6243202)
chr8 (114-163)||(34838164-34838213)
chr8 (101-170)||(43590809-43590878)
chr8 (114-170)||(4148542-4148598)
chr8 (101-169)||(13924124-13924192)
chr8 (101-168)||(39386810-39386877)
chr8 (119-169)||(37784263-37784312)
chr8 (115-163)||(27300475-27300523)
chr8 (121-173)||(43605553-43605605)
[»] chr3 (27 HSPs)
chr3 (104-174)||(29846774-29846844)
chr3 (101-171)||(48117451-48117521)
chr3 (101-175)||(29057763-29057837)
chr3 (101-171)||(35368726-35368796)
chr3 (105-171)||(40821746-40821812)
chr3 (101-170)||(44827068-44827137)
chr3 (101-169)||(9158924-9158992)
chr3 (101-169)||(50745664-50745732)
chr3 (105-175)||(14838927-14838997)
chr3 (110-171)||(9027737-9027798)
chr3 (101-162)||(43894880-43894941)
chr3 (114-174)||(29555724-29555784)
chr3 (105-172)||(27276853-27276920)
chr3 (110-169)||(43149231-43149290)
chr3 (101-169)||(33971998-33972066)
chr3 (101-175)||(26280670-26280744)
chr3 (105-171)||(44689922-44689988)
chr3 (101-161)||(51385336-51385396)
chr3 (127-169)||(11404842-11404884)
chr3 (129-171)||(30664644-30664686)
chr3 (101-171)||(43220028-43220098)
chr3 (114-163)||(32152021-32152070)
chr3 (119-172)||(38296547-38296600)
chr3 (128-169)||(42888661-42888702)
chr3 (142-171)||(55467819-55467848)
chr3 (117-173)||(2935395-2935451)
chr3 (110-170)||(31763931-31763991)
[»] chr4 (30 HSPs)
chr4 (105-172)||(1868778-1868845)
chr4 (101-171)||(4878082-4878152)
chr4 (105-171)||(24310407-24310473)
chr4 (101-171)||(4577679-4577748)
chr4 (105-169)||(22893987-22894051)
chr4 (105-169)||(22945655-22945719)
chr4 (105-171)||(8487754-8487820)
chr4 (101-170)||(53781724-53781793)
chr4 (105-169)||(31413674-31413738)
chr4 (105-166)||(33777013-33777074)
chr4 (105-169)||(45678382-45678446)
chr4 (129-168)||(48760428-48760467)
chr4 (114-172)||(8614310-8614368)
chr4 (105-171)||(9096055-9096121)
chr4 (107-173)||(32294636-32294702)
chr4 (114-171)||(36110262-36110319)
chr4 (105-166)||(43307256-43307316)
chr4 (114-171)||(50291410-50291467)
chr4 (114-170)||(18944413-18944469)
chr4 (115-171)||(56264756-56264812)
chr4 (114-163)||(19807312-19807361)
chr4 (114-163)||(21766675-21766724)
chr4 (130-169)||(36848340-36848379)
chr4 (114-169)||(38960548-38960603)
chr4 (101-172)||(46799870-46799941)
chr4 (114-168)||(39699356-39699410)
chr4 (117-169)||(11492475-11492527)
chr4 (142-174)||(14089929-14089961)
chr4 (101-169)||(29577324-29577392)
chr4 (136-168)||(44539432-44539464)
[»] chr7 (18 HSPs)
chr7 (101-170)||(37848507-37848576)
chr7 (101-167)||(38197776-38197842)
chr7 (101-171)||(22331097-22331167)
chr7 (107-169)||(23034201-23034263)
chr7 (114-171)||(47945111-47945168)
chr7 (114-171)||(47950541-47950598)
chr7 (101-169)||(17039272-17039340)
chr7 (114-174)||(41538608-41538668)
chr7 (123-166)||(2980620-2980663)
chr7 (114-169)||(24380609-24380664)
chr7 (114-169)||(48639273-48639328)
chr7 (107-169)||(29923792-29923853)
chr7 (117-170)||(7295598-7295651)
chr7 (128-169)||(11788376-11788417)
chr7 (114-163)||(27704563-27704612)
chr7 (105-169)||(45335982-45336046)
chr7 (114-169)||(41910073-41910128)
chr7 (105-175)||(1709403-1709473)
[»] chr6 (14 HSPs)
chr6 (101-170)||(6997437-6997506)
chr6 (101-175)||(9395219-9395293)
chr6 (101-171)||(19713109-19713179)
chr6 (101-169)||(32135325-32135393)
chr6 (101-170)||(10557524-10557593)
chr6 (105-170)||(34792125-34792190)
chr6 (101-169)||(2165188-2165256)
chr6 (101-169)||(2176821-2176889)
chr6 (101-169)||(16865644-16865712)
chr6 (112-175)||(16121278-16121341)
chr6 (101-171)||(608547-608617)
chr6 (101-172)||(22422265-22422336)
chr6 (114-171)||(17442950-17443007)
chr6 (132-168)||(12151758-12151794)
[»] chr1 (20 HSPs)
chr1 (101-170)||(40239998-40240067)
chr1 (112-171)||(40118601-40118660)
chr1 (100-169)||(12990373-12990442)
chr1 (114-170)||(29094635-29094691)
chr1 (101-165)||(37947112-37947176)
chr1 (101-171)||(8577388-8577458)
chr1 (114-171)||(41564766-41564823)
chr1 (129-169)||(48257015-48257055)
chr1 (114-170)||(48962114-48962170)
chr1 (105-168)||(26760681-26760744)
chr1 (105-168)||(51666879-51666942)
chr1 (101-171)||(31244621-31244691)
chr1 (101-146)||(4618759-4618804)
chr1 (119-172)||(11897307-11897360)
chr1 (114-170)||(23399876-23399932)
chr1 (105-163)||(37435467-37435526)
chr1 (119-165)||(48336347-48336393)
chr1 (117-169)||(836002-836054)
chr1 (115-163)||(22674826-22674874)
chr1 (135-171)||(35030660-35030696)
[»] scaffold0058 (1 HSPs)
scaffold0058 (101-173)||(3058-3130)
[»] chr5 (23 HSPs)
chr5 (105-169)||(6458886-6458950)
chr5 (100-171)||(33893700-33893771)
chr5 (101-175)||(42364544-42364618)
chr5 (101-166)||(35595877-35595942)
chr5 (115-171)||(17574110-17574166)
chr5 (101-180)||(3849613-3849692)
chr5 (114-172)||(37821026-37821084)
chr5 (101-168)||(12612906-12612973)
chr5 (112-165)||(14522856-14522909)
chr5 (105-170)||(18729164-18729229)
chr5 (114-171)||(21771359-21771416)
chr5 (106-166)||(11878547-11878606)
chr5 (114-170)||(25585343-25585399)
chr5 (114-169)||(34693104-34693159)
chr5 (114-169)||(39032492-39032547)
chr5 (101-169)||(3031949-3032018)
chr5 (101-170)||(9940169-9940238)
chr5 (101-162)||(38919961-38920022)
chr5 (101-169)||(12203260-12203328)
chr5 (110-169)||(35616689-35616748)
chr5 (100-171)||(35924384-35924455)
chr5 (100-166)||(22864270-22864336)
chr5 (101-166)||(43152951-43153016)
[»] scaffold0286 (1 HSPs)
scaffold0286 (101-169)||(17153-17221)
[»] scaffold0014 (1 HSPs)
scaffold0014 (114-169)||(145175-145230)
[»] scaffold0024 (1 HSPs)
scaffold0024 (114-171)||(48782-48839)
[»] scaffold0514 (1 HSPs)
scaffold0514 (117-169)||(1735-1787)
[»] scaffold0592 (1 HSPs)
scaffold0592 (101-170)||(1025-1095)


Alignment Details
Target: chr2 (Bit Score: 109; Significance: 9e-55; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 101 - 266
Target Start/End: Original strand, 40115630 - 40115811
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttaaaagaaagat----------------ga 184  Q
    |||||||| |||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||| |                ||    
T  40115630 aatgaaaagagagcacaacaaggttgtcccaaaaattgtagtaaaaaagttgttcaaatatcattactcttaaaagaaaggtttcaacccacataaaaga 40115729  T
Q  185 aaacttaaatggttgacgtggtcatattttggaacatctccacaacatggtcaataagtagccacaatccgtcaaaatcaac 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40115730 aaacttaaatggttgacgtggtcatattttggaacatctccacaacatggtcaataagtagccacaatccgtcaaaatcaac 40115811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 45202088 - 45202017
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctta 172  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  45202088 aatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactctta 45202017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 11828776 - 11828706
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  11828776 aatgaaaagagagcacaacaaggttgtcctaaaagttgtagcaaaaaagttgttcaaatatcattactctt 11828706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 35008057 - 35007987
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  35008057 aatgaaaagagagcacaacaaggttgtcccaaaagttgtagtaaaaaagttgttcaaatatcattactctt 35007987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 35705873 - 35705803
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  35705873 aatgaaaagagagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 35705803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 101 - 170
Target Start/End: Complemental strand, 22296085 - 22296016
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||| ||||||||    
T  22296085 aatgaaaaaagagcacaacaaggttgtcccaaaaattgtagaaaaaaagttgttcaaatattattactct 22296016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 40115841 - 40115901
Alignment:
Q  295 cttaacttccgcttcaatttcaattatagtaaaccatcgaattgttctttatctatataat 355  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  40115841 cttaacttccgcttcaatttcaattatagtaaaccatcgaattggtctttgtctatataat 40115901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 43205208 - 43205276
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||    
T  43205208 aatgaaaagagagcacaacaaagttgtcccaaaagttgtagcaaaaaagttgttcaaataacattactc 43205276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 27529642 - 27529713
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctta 172  Q
    |||||||| | |||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||    
T  27529642 aatgaaaagaaagcacaacaaggttgtcccgaaagttgtagcaaagaagttgttcaaatatcattactctta 27529713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 35203705 - 35203635
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||||||| | |||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||    
T  35203705 aatgaaaagatagcacaacaaggttgtcccaaaaattgtagcaaaaaaattgttcaaatatcattactctt 35203635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 27538888 - 27538820
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||||| | |||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||    
T  27538888 aatgaaaagaaagcacaacaaggttgtcccgaaagttgtagcaaaaaagttgttcaaatattattactc 27538820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 38778015 - 38778075
Alignment:
Q  110 agagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    |||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||    
T  38778015 agagcacaacaaggttgtcccaaaagttatagcaaaaaagttattcaaatatcattactct 38778075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 41156959 - 41156891
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||||| ||||||||||||  || |||||||||||||||||||||| ||||||||||||||||||||    
T  41156959 aatgaaaagagagcacaacaaaattgtcccaaaagttgtagcaaaaaaattgttcaaatatcattactc 41156891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 115 - 170
Target Start/End: Original strand, 28679256 - 28679311
Alignment:
Q  115 acaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    ||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||    
T  28679256 acaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcattactct 28679311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 26387781 - 26387719
Alignment:
Q  107 aaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||| |||||||||||| |||||||||||||| ||||| |||||||||||||||| |||||    
T  26387781 aaaagaacacaacaaggttgtcccaaaagttgtatcaaaagagttgttcaaatatcactactc 26387719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 37064187 - 37064244
Alignment:
Q  115 acaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctta 172  Q
    |||||||||||||||||||||||||| ||||| ||||| |||||||||| ||||||||    
T  37064187 acaacaaggttatcccaaaagttgtaccaaaagagttgatcaaatatcagtactctta 37064244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 8757668 - 8757728
Alignment:
Q  110 agagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    |||| ||||||||||| | |||||||||||| ||||| |||||||||||||||||||||||    
T  8757668 agagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcattactct 8757728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 13881210 - 13881278
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||||| ||||||||| || ||| || |||||||||||||||||||||| ||||||| |||||||||    
T  13881210 aatgaaaagagagcacaataaagttgtcacaaaagttgtagcaaaaaagtttttcaaatgtcattactc 13881278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 14021335 - 14021403
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||||| ||||||||| || ||| || |||||||||||||||||||||| ||||||| |||||||||    
T  14021335 aatgaaaagagagcacaataaagttgtcacaaaagttgtagcaaaaaagtttttcaaatgtcattactc 14021403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 16463416 - 16463476
Alignment:
Q  110 agagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    ||||||||||||| || |||||||||||||| || || |||||||||||||||||||||||    
T  16463416 agagcacaacaagattgtcccaaaagttgtaccataagagttgttcaaatatcattactct 16463476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 23141469 - 23141537
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    ||||| || |||| ||||||||||| |||||||||||||| ||||| |||||||||||||||| |||||    
T  23141469 aatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactc 23141537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 23553259 - 23553327
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    ||||| || |||| ||||||||||| |||||||||||||| ||||| |||||||||||||||| |||||    
T  23553259 aatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactc 23553327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 30340109 - 30340177
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    ||||| || |||| ||||||||||| |||||||||||||| ||||| |||||||||||||||| |||||    
T  30340109 aatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactc 30340177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 35518399 - 35518459
Alignment:
Q  110 agagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    |||| ||||||| ||| |||||||||||||| ||||| |||||||||||||||||||||||    
T  35518399 agagaacaacaaagttgtcccaaaagttgtatcaaaatagttgttcaaatatcattactct 35518459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 12257029 - 12257084
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||||||||| |||||||| ||||| |||||||||||||||||||||| |||||    
T  12257029 cacaacaaggttgtcccaaaaattgtaccaaaaaagttgttcaaatatcactactc 12257084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 11152651 - 11152585
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||| ||| ||||||||| || ||||||||| |||| ||||||| ||||||||||||||||||||||    
T  11152651 aaaagagaacacaacaagattgtcccaaaagctgtaccaaaaaatttgttcaaatatcattactctt 11152585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 101 - 159
Target Start/End: Original strand, 17999859 - 17999917
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaat 159  Q
    |||||||| | | |||||||||||| ||||||||||| |||||||||||||||||||||    
T  17999859 aatgaaaagatatcacaacaaggttgtcccaaaagttatagcaaaaaagttgttcaaat 17999917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 35798335 - 35798392
Alignment:
Q  112 agcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||||||||||| |||||||| || || ||||||||||||||||||| ||||||||    
T  35798335 agcacaacaaggttgtcccaaaaattataacaaaaaagttgttcaaataacattactc 35798392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 5852586 - 5852641
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||||||||| ||||||||||| || ||||| |||||||||||||||| |||||    
T  5852586 cacaacaaggttgtcccaaaagttttaccaaaagagttgttcaaatatcactactc 5852641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 43515025 - 43515080
Alignment:
Q  120 aaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttaaaa 175  Q
    |||||| |||||||||||||| ||||| ||||||||||||||||| ||||| ||||    
T  43515025 aaggttgtcccaaaagttgtaacaaaagagttgttcaaatatcatcactctaaaaa 43515080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 160
Target Start/End: Original strand, 44897745 - 44897800
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaata 160  Q
    |||| ||| |||||||||||| |||||||||||||| ||||| |||||||||||||    
T  44897745 aaaagagaacacaacaaggttgtcccaaaagttgtatcaaaagagttgttcaaata 44897800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 166
Target Start/End: Complemental strand, 6885436 - 6885371
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcatta 166  Q
    |||||||| |||||| ||||| ||| ||| |||| |||||  ||||||||||||||||||||||||    
T  6885436 aatgaaaagagagcataacaaagttgtcctaaaaattgtattaaaaaagttgttcaaatatcatta 6885371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 34141571 - 34141626
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||||| ||| | |||||||||||| ||||| |||||||||||||||| |||||    
T  34141571 cacaacaaagttgttccaaaagttgtaccaaaagagttgttcaaatatcactactc 34141626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 1151644 - 1151712
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    ||||||||||||| ||||||| ||| || |||| |||||| ||||| ||||||  |||||||| |||||    
T  1151644 aatgaaaaaagagaacaacaaagttgtctcaaaggttgtaccaaaatagttgtcaaaatatcactactc 1151712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 38533154 - 38533086
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    ||||| || |||| ||||||||||| |||||||| ||||| ||||| | || ||||||||||| |||||    
T  38533154 aatgacaatagagaacaacaaggttgtcccaaaaattgtaccaaaagaattattcaaatatcactactc 38533086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 22836095 - 22836025
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22836095 aatgaaaagagagcacaacaaggttatcccaaaaattgtagcaaaaaagttgttcaaatatcattactctt 22836025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 41776290 - 41776360
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  41776290 aatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 41776360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 37471758 - 37471829
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctta 172  Q
    |||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  37471758 aatgaaaagagagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactctta 37471829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 21649122 - 21649056
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21649122 aaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 21649056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 22203167 - 22203101
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  22203167 aaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattgctctt 22203101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 23709091 - 23709161
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||||||| |||||| ||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||    
T  23709091 aatgaaaagagagcataacaaggttgtcccaaaaattgtagcaaaaaagttgttcaaataacattactctt 23709161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 10591830 - 10591760
Alignment:
Q  100 aaatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    ||||||||||| |||||||||| ||| |||||||| ||||||| ||||| |||||||||||||||||||||    
T  10591830 aaatgaaaaaatagcacaacaaagttgtcccaaaaattgtagcgaaaaaattgttcaaatatcattactct 10591760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 33692836 - 33692905
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    |||||||| |||||||||||| ||| |||||||| || || |||||||||||||||||||||||||||||    
T  33692836 aatgaaaagagagcacaacaaagttgtcccaaaaattataacaaaaaagttgttcaaatatcattactct 33692905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 170
Target Start/End: Original strand, 18550107 - 18550163
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    |||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||    
T  18550107 cacaacaaggttgtcccaaaagttgtaccaaaatagttgttcaaatatcattactct 18550163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 1422658 - 1422584
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttaaaa 175  Q
    |||||||||| || | ||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||| ||||    
T  1422658 aatgaaaaaatagaataacaaggttgtcccaaaagttgtatcaaaatagttgttcaaatatcattattctaaaaa 1422584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 1646371 - 1646441
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||||||| ||||||||| ||| || | |||||| || |||||||||||||||||||||||||||||||||    
T  1646371 aatgaaaagagagcacaataagattgttccaaaaattatagcaaaaaagttgttcaaatatcattactctt 1646441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 32777998 - 32778066
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    |||||||| ||||||||||||| || || ||||| ||||||||||||||||||| |||||||||||||||    
T  32777998 aatgaaaagagagcacaacaagattgtctcaaaa-ttgtagcaaaaaagttgtttaaatatcattactct 32778066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 114 - 170
Target Start/End: Original strand, 25430774 - 25430830
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    |||||||||||| |||||||||||||| ||||| |||||||||||||||| ||||||    
T  25430774 cacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactct 25430830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 8233452 - 8233378
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttaaaa 175  Q
    ||||| || |||| ||||||||||||||| ||||||||||  |||| || |||||||||||||||||||| ||||    
T  8233452 aatgagaagagagaacaacaaggttatccaaaaagttgtacaaaaatagatgttcaaatatcattactctaaaaa 8233378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 42651035 - 42651105
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    ||||| || |||| ||||||||||| || ||||||||||| ||||| ||||||||||||||||||| ||||    
T  42651035 aatgagaagagagaacaacaaggttgtctcaaaagttgtaccaaaatagttgttcaaatatcattattctt 42651105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 23265305 - 23265240
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    |||| ||||||||||||  || || ||||||||||| ||||||||||||| |||||||||||||||    
T  23265305 aaaagagagcacaacaaaattgtcgcaaaagttgtaacaaaaaagttgtttaaatatcattactct 23265240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 28713222 - 28713278
Alignment:
Q  115 acaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    ||||||||||| |||||||| ||||| ||||| |||||||||||||||| |||||||    
T  28713222 acaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcactactctt 28713278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 28720569 - 28720625
Alignment:
Q  115 acaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    ||||||||||| |||||||| ||||| ||||| |||||||||||||||| |||||||    
T  28720569 acaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcactactctt 28720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 28728211 - 28728267
Alignment:
Q  115 acaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    ||||||||||| |||||||| ||||| ||||| |||||||||||||||| |||||||    
T  28728211 acaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcactactctt 28728267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 34247889 - 34247957
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||||| |||| ||||||||||| |||||||||||||  |||||  ||||| |||||||||||||||    
T  34247889 aatgaaaagagagaacaacaaggttgtcccaaaagttgtctcaaaagggttgtacaaatatcattactc 34247957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 173
Target Start/End: Original strand, 40570649 - 40570695
Alignment:
Q  127 tcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttaa 173  Q
    |||||||| || || ||||||||||||||||||||||||||||||||    
T  40570649 tcccaaaaattataacaaaaaagttgttcaaatatcattactcttaa 40570695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 6243149 - 6243202
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgtt 154  Q
    |||||||| ||||||||||||  || |||||||||||||||||||||| |||||    
T  6243149 aatgaaaagagagcacaacaaaattgtcccaaaagttgtagcaaaaaaattgtt 6243202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 34838213 - 34838164
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatca 163  Q
    |||||||||||| ||| |||||||||| ||||| ||||||||||||||||    
T  34838213 cacaacaaggttgtcctaaaagttgtaccaaaagagttgttcaaatatca 34838164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 43590809 - 43590878
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    |||||||| ||||||||| ||  || || ||||| || ||| ||||||||||||||||||||||||||||    
T  43590809 aatgaaaagagagcacaataaaattgtctcaaaaattatagtaaaaaagttgttcaaatatcattactct 43590878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 170
Target Start/End: Complemental strand, 4148598 - 4148542
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    ||||| |||||| |||||||||||||| ||||| ||| |||||||||||| ||||||    
T  4148598 cacaataaggttgtcccaaaagttgtaccaaaagagtcgttcaaatatcactactct 4148542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 13924124 - 13924192
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    ||||| || |||| |||||||| || || ||||||||||| ||||| |||||||||||||| |||||||    
T  13924124 aatgagaagagaggacaacaagattgtcacaaaagttgtaccaaaagagttgttcaaatattattactc 13924192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 39386877 - 39386810
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattact 168  Q
    |||||||| |||| |||| ||| || ||| |||| |||||| ||||||||| ||||||||||||||||    
T  39386877 aatgaaaagagagtacaataagattgtccaaaaaattgtagaaaaaaagtttttcaaatatcattact 39386810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 37784312 - 37784263
Alignment:
Q  119 caaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    ||||||||||| ||||||||||  |||||| ||||||||||||||||||||    
T  37784312 caaggttatcctaaaagttgtaataaaaaa-ttgttcaaatatcattactc 37784263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 27300475 - 27300523
Alignment:
Q  115 acaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatca 163  Q
    |||||||| || |||||||||||||| | ||| ||||||||||||||||    
T  27300475 acaacaagattgtcccaaaagttgtaccgaaagagttgttcaaatatca 27300523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 173
Target Start/End: Complemental strand, 43605605 - 43605553
Alignment:
Q  121 aggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttaa 173  Q
    ||||| || ||||||||||  | |||| |||||||||||||||||||||||||    
T  43605605 aggttgtcacaaaagttgtcactaaaaggttgttcaaatatcattactcttaa 43605553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 3e-27; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 29846844 - 29846774
Alignment:
Q  104 gaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttaaa 174  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29846844 gaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttaaa 29846774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 48117451 - 48117521
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  48117451 aatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 48117521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 101 - 175
Target Start/End: Original strand, 29057763 - 29057837
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttaaaa 175  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  29057763 aatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaaattgttcaaatatcattactctaaaaa 29057837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 35368726 - 35368796
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||||||| ||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||    
T  35368726 aatgaaaagagagcacaacaagattgtcccaaaagttgtagcaaacaagttgttcaaatatcattactctt 35368796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 40821812 - 40821746
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  40821812 aaaagagagcacaacaaggttgtcccaaaagttgtagtaaaaaagttgttcaaatatcattactctt 40821746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 44827068 - 44827137
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    |||||||| | |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  44827068 aatgaaaagacagcacaacaaggttgtcctaaaagttgtagcaaaaaagttgttcaaatatcattactct 44827137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 9158992 - 9158924
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||    
T  9158992 aatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaccatcattactc 9158924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 50745664 - 50745732
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||||| |||||||||||||||| |||||||| || |||||||||| ||||||||||||||||||||    
T  50745664 aatgaaaagagagcacaacaaggttgtcccaaaaattatagcaaaaaaattgttcaaatatcattactc 50745732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 175
Target Start/End: Complemental strand, 14838997 - 14838927
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttaaaa 175  Q
    |||| ||| |||||||||||| |||||||| ||||| ||||| |||||||||||||||| |||||||||||    
T  14838997 aaaagagaacacaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcactactcttaaaa 14838927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 9027737 - 9027798
Alignment:
Q  110 agagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||| ||||||||||| | |||||||||||| ||||| ||||||||||||||||||||||||    
T  9027737 agagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcattactctt 9027798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 43894941 - 43894880
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatc 162  Q
    |||||||| |||||||||||| ||| |||||||| || ||||||||||||||||||||||||    
T  43894941 aatgaaaagagagcacaacaaagttgtcccaaaaattatagcaaaaaagttgttcaaatatc 43894880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 29555784 - 29555724
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttaaa 174  Q
    |||||||||||| |||||||||||||| ||||| |||||||||||||||| ||||| ||||    
T  29555784 cacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactcataaa 29555724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 27276853 - 27276920
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctta 172  Q
    ||||||||  ||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||||||    
T  27276853 aaaaaagaaaacaacaaggttgtctcaaaaattgtaccaaaatagttgttcaaatatcattactctta 27276920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 43149290 - 43149231
Alignment:
Q  110 agagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||| ||||||||||| | |||||||||||| ||||| ||||||||||||||||||||||    
T  43149290 agagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcattactc 43149231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 33971998 - 33972066
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    ||||| || |||| ||||||||||| || ||||| ||||| ||||| ||||||||||||||||||||||    
T  33971998 aatgagaagagagaacaacaaggttgtctcaaaaattgtaccaaaatagttgttcaaatatcattactc 33972066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 26280744 - 26280670
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttaaaa 175  Q
    |||||||| |||| |||||||| ||||||||||| || || ||||| | |||||||||||| ||||||| |||||    
T  26280744 aatgaaaagagagaacaacaagattatcccaaaaattataccaaaataattgttcaaatattattactcataaaa 26280670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 44689922 - 44689988
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||| ||| |||||||||||| |||||||||||||  ||||| | |||||||||||||| |||||||    
T  44689922 aaaagagaacacaacaaggttgtcccaaaagttgttccaaaagaattgttcaaatatcactactctt 44689988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 51385396 - 51385336
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatat 161  Q
    |||||||| |||| |||||| |||| ||||||||||||||  |||| ||||||||||||||    
T  51385396 aatgaaaagagagaacaacatggttgtcccaaaagttgtactaaaatagttgttcaaatat 51385336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 11404884 - 11404842
Alignment:
Q  127 tcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||    
T  11404884 tcccaaaaattgtaccaaaatagttgttcaaatatcattactc 11404842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 30664644 - 30664686
Alignment:
Q  129 ccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||||||||||| |||||||||| ||||||||||| |||||||    
T  30664644 ccaaaagttgtaccaaaaaagttattcaaatatcactactctt 30664686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 43220098 - 43220028
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    ||||| || |||| |||||||  || ||||||||||| ||  ||||||||||||||||||||| |||||||    
T  43220098 aatgagaatagagaacaacaaaattgtcccaaaagttatactaaaaaagttgttcaaatatcactactctt 43220028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 32152021 - 32152070
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatca 163  Q
    |||||||| ||| ||| |||| ||||| ||||||||||||||||||||||    
T  32152021 cacaacaaagttgtcctaaaaattgtaccaaaaaagttgttcaaatatca 32152070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 38296600 - 38296547
Alignment:
Q  119 caaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctta 172  Q
    ||||||| ||| |||| || || ||||| |||||||||||||||||||||||||    
T  38296600 caaggttgtccaaaaaattataacaaaagagttgttcaaatatcattactctta 38296547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 42888702 - 42888661
Alignment:
Q  128 cccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    ||||||| || || ||||||||||||||||||||||||||||    
T  42888702 cccaaaaattataacaaaaaagttgttcaaatatcattactc 42888661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 171
Target Start/End: Original strand, 55467819 - 55467848
Alignment:
Q  142 caaaaaagttgttcaaatatcattactctt 171  Q
    ||||||||||||||||||||||||||||||    
T  55467819 caaaaaagttgttcaaatatcattactctt 55467848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 173
Target Start/End: Complemental strand, 2935451 - 2935395
Alignment:
Q  117 aacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttaa 173  Q
    ||||||||| || |||||||||||  |||| ||||||||||||| || |||||||||    
T  2935451 aacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactactcttaa 2935395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 31763931 - 31763991
Alignment:
Q  110 agagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    |||| |||||||  || |||||||| ||||| ||||| ||||||| |||||||||||||||    
T  31763931 agagaacaacaaaattgtcccaaaaattgtaccaaaatagttgtttaaatatcattactct 31763991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 1868845 - 1868778
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctta 172  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  1868845 aaaaaagagcacaacaaggttgtcccaaaagttgtagtaaaaaagttgttcaaatatcattactctta 1868778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 4878082 - 4878152
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  4878082 aatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattgctctt 4878152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 24310473 - 24310407
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  24310473 aaaaaagagcacaacaaggttgtcccaaaagttgtagcaaaaaaattgttcaaatatcattactctt 24310407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 4577679 - 4577748
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  4577679 aatgaaaagagagcacaacaaggttgtcccaaaagttgtagc-aaaaagttgttcaaatatcattactctt 4577748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 22893987 - 22894051
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  22893987 aaaagagagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 22894051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 22945655 - 22945719
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  22945655 aaaagagagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 22945719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 8487754 - 8487820
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||| |||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||    
T  8487754 aaaagagagcacaacaaggttgtctcaaaagttgtagcaaaaaaattgttcaaatatcattactctt 8487820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 101 - 170
Target Start/End: Complemental strand, 53781793 - 53781724
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    |||||||| |||||| ||||||||| ||||||||||||||||| |||||||||| |||||||||||||||    
T  53781793 aatgaaaagagagcataacaaggttgtcccaaaagttgtagcacaaaagttgttgaaatatcattactct 53781724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 31413738 - 31413674
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||| |||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||    
T  31413738 aaaagagagcacaacaaggttgtcacaaaacttgtagcaaaaaagttgttcaaatatcattactc 31413674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 33777013 - 33777074
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcatta 166  Q
    |||| |||| |||||||||||||||||||| ||||| ||||| |||||||||||||||||||    
T  33777013 aaaagagagaacaacaaggttatcccaaaaattgtaccaaaatagttgttcaaatatcatta 33777074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 45678382 - 45678446
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||| |||| ||||||||||| | |||||||||||| ||||| ||||||||||||||||||||||    
T  45678382 aaaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcattactc 45678446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 168
Target Start/End: Original strand, 48760428 - 48760467
Alignment:
Q  129 ccaaaagttgtagcaaaaaagttgttcaaatatcattact 168  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  48760428 ccaaaagttgtagcaaaaaagttgttcaaatatcattact 48760467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 8614310 - 8614368
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctta 172  Q
    |||||||||||| |||||||| |||||  ||||||||||||||||||||| ||||||||    
T  8614310 cacaacaaggttgtcccaaaaattgtacaaaaaaagttgttcaaatatcactactctta 8614368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 9096055 - 9096121
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||||| || ||||||||||| | |||||||||||| ||||| | ||||||||||||||||||||||    
T  9096055 aaaaaaaagaacaacaaggttgtaccaaaagttgtatcaaaataattgttcaaatatcattactctt 9096121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 107 - 173
Target Start/End: Complemental strand, 32294702 - 32294636
Alignment:
Q  107 aaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttaa 173  Q
    |||||| |||||||||||| |||||||| || || ||||| |||||||||||||||| |||||||||    
T  32294702 aaaagaacacaacaaggttgtcccaaaaattataccaaaagagttgttcaaatatcactactcttaa 32294636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 36110262 - 36110319
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||||||||||| |||||||| ||||| ||||| |||||||||||||||| |||||||    
T  36110262 cacaacaaggttgtcccaaaaattgtatcaaaagagttgttcaaatatcactactctt 36110319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 43307316 - 43307256
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcatta 166  Q
    |||| ||||||||||||||||||||||||| |||||  ||||||||||||||||||| ||||    
T  43307316 aaaagagagcacaacaaggttatcccaaaaattgta-aaaaaaagttgttcaaatataatta 43307256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 50291410 - 50291467
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||||||||||| |||||||||||||| ||||| ||||||||||||| || |||||||    
T  50291410 cacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaataacactactctt 50291467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 114 - 170
Target Start/End: Original strand, 18944413 - 18944469
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    ||||| |||||| |||||||||||||| ||||| |||||||||||||||| ||||||    
T  18944413 cacaataaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactct 18944469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 56264812 - 56264756
Alignment:
Q  115 acaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    ||||||| |||||  ||||||||||||||||||| ||||||||||| ||||||||||    
T  56264812 acaacaaagttatttcaaaagttgtagcaaaaaaattgttcaaataacattactctt 56264756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 19807361 - 19807312
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatca 163  Q
    |||||||||||| |||||||| |||||  |||||||||||||||||||||    
T  19807361 cacaacaaggttgtcccaaaaattgtacaaaaaaagttgttcaaatatca 19807312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 21766675 - 21766724
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatca 163  Q
    |||||||||||| ||||||||||| || ||||| ||||||||||||||||    
T  21766675 cacaacaaggttgtcccaaaagttataccaaaagagttgttcaaatatca 21766724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 169
Target Start/End: Complemental strand, 36848379 - 36848340
Alignment:
Q  130 caaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    ||||||||||| ||||| ||||||||||||||||||||||    
T  36848379 caaaagttgtatcaaaagagttgttcaaatatcattactc 36848340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 38960603 - 38960548
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    ||||||||| || |||||||| ||||| ||||| |||||||||||||||| |||||    
T  38960603 cacaacaagattgtcccaaaaattgtatcaaaagagttgttcaaatatcactactc 38960548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 46799870 - 46799941
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctta 172  Q
    ||||| || |||| ||||||||||| |||||||| ||||| |||||   |||||||||||||||| ||||||    
T  46799870 aatgagaatagagaacaacaaggttgtcccaaaaattgtaccaaaatgattgttcaaatatcattgctctta 46799941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 39699410 - 39699356
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattact 168  Q
    ||||| |||||| | |||||||||||| ||||| |||||||||||||||| ||||    
T  39699410 cacaataaggttgttccaaaagttgtatcaaaagagttgttcaaatatcactact 39699356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 11492527 - 11492475
Alignment:
Q  117 aacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    ||||||||||| |||||||||||  ||||||| || | |||||||||||||||    
T  11492527 aacaaggttattccaaaagttgtctcaaaaaaattatacaaatatcattactc 11492475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 14089961 - 14089929
Alignment:
Q  142 caaaaaagttgttcaaatatcattactcttaaa 174  Q
    ||||| |||||||||||||||||||||||||||    
T  14089961 caaaatagttgttcaaatatcattactcttaaa 14089929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 29577392 - 29577324
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||||| |||| ||||||||||| |||||||| |||||  |||  || ||||||||||| |||||||    
T  29577392 aatgaaaagagagaacaacaaggttgtcccaaaaattgtacaaaagtagatgttcaaatataattactc 29577324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 168
Target Start/End: Original strand, 44539432 - 44539464
Alignment:
Q  136 ttgtagcaaaaaagttgttcaaatatcattact 168  Q
    |||||| ||||||||||||||||||||||||||    
T  44539432 ttgtaggaaaaaagttgttcaaatatcattact 44539464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 3e-24; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 101 - 170
Target Start/End: Complemental strand, 37848576 - 37848507
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  37848576 aatgaaaagagagcacaacaaggttatcctaaaagttgtagcaaaaaagttgttcaaatataattactct 37848507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 101 - 167
Target Start/End: Original strand, 38197776 - 38197842
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattac 167  Q
    |||||||| | ||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  38197776 aatgaaaagatagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaatatcattac 38197842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 22331167 - 22331097
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||||||| |||||| ||||||||| |||||||| ||||||||||||| ||||||||||| ||||||||||    
T  22331167 aatgaaaagagagcataacaaggttgtcccaaaaattgtagcaaaaaaattgttcaaataacattactctt 22331097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 23034263 - 23034201
Alignment:
Q  107 aaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||| |||||    
T  23034263 aaaagagcacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactc 23034201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 47945111 - 47945168
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||||||||||| |||||||||||||| ||||| |||||||||||||||| |||||||    
T  47945111 cacaacaaggttgtcccaaaagttgtatcaaaagagttgttcaaatatcactactctt 47945168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 47950541 - 47950598
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||||||||||| |||||||||||||| ||||| |||||||||||||||| |||||||    
T  47950541 cacaacaaggttgtcccaaaagttgtatcaaaagagttgttcaaatatcactactctt 47950598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 17039272 - 17039340
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||||| ||| |||||||||||| |||||||| || |||||||||| ||||||||||||| ||||||    
T  17039272 aatgaaaagagaacacaacaaggttgtcccaaaaattatagcaaaaaaattgttcaaatatcgttactc 17039340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 114 - 174
Target Start/End: Original strand, 41538608 - 41538668
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttaaa 174  Q
    |||||||||||| |||||||||||||| ||||| | |||||||||||||| |||| |||||    
T  41538608 cacaacaaggttgtcccaaaagttgtatcaaaagaattgttcaaatatcactactattaaa 41538668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 2980663 - 2980620
Alignment:
Q  123 gttatcccaaaagttgtagcaaaaaagttgttcaaatatcatta 166  Q
    ||||||||||||||| || |||||||||||||||||||||||||    
T  2980663 gttatcccaaaagttatatcaaaaaagttgttcaaatatcatta 2980620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 24380664 - 24380609
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||||||||| | |||||||||||| ||||| |||||||||||||||| |||||    
T  24380664 cacaacaaggttgttccaaaagttgtaccaaaagagttgttcaaatatcactactc 24380609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 48639328 - 48639273
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||||||||| | |||||||||||| ||||| |||||||||||||||| |||||    
T  48639328 cacaacaaggttgttccaaaagttgtaccaaaagagttgttcaaatatcactactc 48639273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 29923792 - 29923853
Alignment:
Q  107 aaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||| |||||||||||| ||| |||||||||| ||||| |||||||||||||||| |||||    
T  29923792 aaaagaacacaacaaggttgtcc-aaaagttgtaccaaaagagttgttcaaatatcactactc 29923853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 7295598 - 7295651
Alignment:
Q  117 aacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    ||||||||| | |||||||||||  |||||||||||| ||||||||||||||||    
T  7295598 aacaaggttgttccaaaagttgtctcaaaaaagttgtacaaatatcattactct 7295651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 11788417 - 11788376
Alignment:
Q  128 cccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  11788417 cccaaaagttgtatcaaaatagttgttcaaatatcattactc 11788376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 27704563 - 27704612
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatca 163  Q
    |||||||| ||| |||||||||||||| ||||| ||||||||||||||||    
T  27704563 cacaacaaagttgtcccaaaagttgtaacaaaagagttgttcaaatatca 27704612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 45335982 - 45336046
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||| |||| ||||||||||| |||||||| ||||| ||||| ||| |||||||||||| |||||    
T  45335982 aaaagagagaacaacaaggttgtcccaaaatttgtaccaaaagagtagttcaaatatcactactc 45336046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 41910128 - 41910073
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||||||||| ||| |||||||||| ||||| | |||||||||||||| |||||    
T  41910128 cacaacaaggttgtcctaaaagttgtaccaaaagaattgttcaaatatcactactc 41910073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 175
Target Start/End: Original strand, 1709403 - 1709473
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttaaaa 175  Q
    |||| ||| ||||||||| || |||||||| || || ||||| |||||||||||||||| ||||| |||||    
T  1709403 aaaagagaacacaacaagattgtcccaaaaattataccaaaagagttgttcaaatatcactactcataaaa 1709473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 101 - 170
Target Start/End: Complemental strand, 6997506 - 6997437
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  6997506 aatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaaattgttcaaatatcattactct 6997437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 9395293 - 9395219
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttaaaa 175  Q
    ||||| || ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9395293 aatgataagagagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactctaaaaa 9395219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 19713109 - 19713179
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||||||| |||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||    
T  19713109 aatgaaaagagagcacaacaaggttgtcccaaaagttgttgtaaaaaagttgttcaaatatcattactctt 19713179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 32135393 - 32135325
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||||| ||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||    
T  32135393 aatgaaaagagagcacaacaagattgtcctaaaagttgtagcaaaaaagttgttcaaatatcattactc 32135325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 10557524 - 10557593
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    |||||||| |||| |||||||| || | ||||||||||||||||||||||||||||||||||||||||||    
T  10557524 aatgaaaagagagtacaacaagattgttccaaaagttgtagcaaaaaagttgttcaaatatcattactct 10557593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 34792125 - 34792190
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    |||||||| |||||||||||| ||||||||||| || ||||| |||||||||||||||| ||||||    
T  34792125 aaaaaagaacacaacaaggttgtcccaaaagttataccaaaagagttgttcaaatatcactactct 34792190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 2165256 - 2165188
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||||| |||||||| ||||||| || ||||||||||||||||||| ||||| ||||||| ||||||    
T  2165256 aatgaaaagagagcacatcaaggttgtcacaaaagttgtagcaaaaaaattgtttaaatatctttactc 2165188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 2176889 - 2176821
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||||| |||||||| ||||||| || ||||||||||||||||||| ||||| ||||||| ||||||    
T  2176889 aatgaaaagagagcacatcaaggttgtcacaaaagttgtagcaaaaaaattgtttaaatatctttactc 2176821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 16865644 - 16865712
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||||| |||||||||||| ||| ||| | | |||||||||||||| ||||||||||||||||||||    
T  16865644 aatgaaaagagagcacaacaaagttgtcctatatgttgtagcaaaaaaattgttcaaatatcattactc 16865712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 175
Target Start/End: Original strand, 16121278 - 16121341
Alignment:
Q  112 agcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttaaaa 175  Q
    ||||||||||  || ||||||||||| ||||||||||||||||||||||||| |||||| ||||    
T  16121278 agcacaacaaaattgtcccaaaagttatagcaaaaaagttgttcaaatatcagtactctaaaaa 16121341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 608617 - 608547
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    ||||| || |||| ||||||||||| |||||| ||||||| ||||| |||||||||||||||||| |||||    
T  608617 aatgagaagagagaacaacaaggttgtcccaacagttgtaccaaaatagttgttcaaatatcattgctctt 608547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 22422265 - 22422336
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctta 172  Q
    ||||| || |||| ||||||| ||| | |||||||||||| ||||| | |||||||||||||||||||||||    
T  22422265 aatgagaagagagaacaacaaagttgtaccaaaagttgtaccaaaataattgttcaaatatcattactctta 22422336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 17442950 - 17443007
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    ||||| |||||| |||||||||||||| ||||| ||||||||||| |||| |||||||    
T  17442950 cacaataaggttgtcccaaaagttgtaccaaaagagttgttcaaaaatcactactctt 17443007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 12151794 - 12151758
Alignment:
Q  132 aaagttgtagcaaaaaagttgttcaaatatcattact 168  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  12151794 aaagttgtaccaaaatagttgttcaaatatcattact 12151758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 6e-22; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 101 - 170
Target Start/End: Complemental strand, 40240067 - 40239998
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    |||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  40240067 aatgaaaagatagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatattattactct 40239998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 40118660 - 40118601
Alignment:
Q  112 agcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||    
T  40118660 agcacaacaaggttgtcccaaaaattgtagcaaaaaaattgttcaaatatcattactctt 40118601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 12990442 - 12990373
Alignment:
Q  100 aaatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||| |||| ||| |||||||||||| |||||||||||||| ||||| |||||||||||||||| |||||    
T  12990442 aaataaaaagagaacacaacaaggttgtcccaaaagttgtatcaaaagagttgttcaaatatcactactc 12990373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 114 - 170
Target Start/End: Complemental strand, 29094691 - 29094635
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    ||||| |||||| |||||||||||||| ||||| |||||||||||||||||||||||    
T  29094691 cacaataaggttgtcccaaaagttgtatcaaaagagttgttcaaatatcattactct 29094635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 37947176 - 37947112
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcatt 165  Q
    ||||| || |||| ||||||||||| |||||||||||||| ||||| ||||||||||||||||||    
T  37947176 aatgagaagagagaacaacaaggttgtcccaaaagttgtaacaaaatagttgttcaaatatcatt 37947112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 8577458 - 8577388
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    ||||| || |||| ||||||||||| ||||||||||| || ||||| |||||||||||||||||| |||||    
T  8577458 aatgagaatagagaacaacaaggttgtcccaaaagttataccaaaatagttgttcaaatatcattgctctt 8577388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 41564823 - 41564766
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||||||||||| |||||||| ||||| ||||| |||||||||||||||| |||||||    
T  41564823 cacaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcactactctt 41564766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 48257015 - 48257055
Alignment:
Q  129 ccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  48257015 ccaaaaattgtagcaaaaaagttgttcaaatatcattactc 48257055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 114 - 170
Target Start/End: Original strand, 48962114 - 48962170
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    |||||||||||| |||||||| ||||| ||||| |||||||||||||||| ||||||    
T  48962114 cacaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcaatactct 48962170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 26760681 - 26760744
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattact 168  Q
    |||| |||||||||||||||| || |||||||| || ||||||||||||| ||||| |||||||    
T  26760681 aaaagagagcacaacaaggttgtctcaaaagttataacaaaaaagttgtttaaataacattact 26760744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 51666879 - 51666942
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattact 168  Q
    |||| ||||||||||||  ||||||||||| || |||||||| |||||||||||||||| ||||    
T  51666879 aaaagagagcacaacaatattatcccaaaaattatagcaaaatagttgttcaaatatcactact 51666942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 31244691 - 31244621
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    ||||| || |||| |||||| |||| ||||||| |||||| ||||| |||||||||||||||||| |||||    
T  31244691 aatgagaagagagaacaacatggttgtcccaaatgttgtaccaaaatagttgttcaaatatcattgctctt 31244621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 4618759 - 4618804
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaa 146  Q
    ||||||||||||| ||||||||||||||||||||||| || |||||    
T  4618759 aatgaaaaaagagaacaacaaggttatcccaaaagttataccaaaa 4618804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 11897307 - 11897360
Alignment:
Q  119 caaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctta 172  Q
    ||||||| || ||||| ||||| ||||| |||||||||||||||||||||||||    
T  11897307 caaggttgtcacaaaaattgtaacaaaagagttgttcaaatatcattactctta 11897360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 170
Target Start/End: Complemental strand, 23399932 - 23399876
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    |||||||||||| |||||||| ||||| ||||| ||||||| |||||||| ||||||    
T  23399932 cacaacaaggttgtcccaaaaattgtaccaaaagagttgtttaaatatcactactct 23399876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 105 - 163
Target Start/End: Complemental strand, 37435526 - 37435467
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagc-aaaaaagttgttcaaatatca 163  Q
    ||||||||||||||||| ||| |||||||| || |||| |||||| ||||||||||||||    
T  37435526 aaaaaagagcacaacaaagttgtcccaaaaattatagcaaaaaaaattgttcaaatatca 37435467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 48336393 - 48336347
Alignment:
Q  119 caaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcatt 165  Q
    ||||||| ||| |||||||||| ||||| ||||||||||||||||||    
T  48336393 caaggttgtccaaaaagttgtaacaaaatagttgttcaaatatcatt 48336347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 836002 - 836054
Alignment:
Q  117 aacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||| || |||||||||||||| ||||| ||||||||||||| || |||||    
T  836002 aacaagattgtcccaaaagttgtaccaaaagagttgttcaaataacactactc 836054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 22674826 - 22674874
Alignment:
Q  115 acaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatca 163  Q
    |||||||  |||| |||||||||||| ||||||| ||||||||||||||    
T  22674826 acaacaaaattattccaaaagttgtaccaaaaaaattgttcaaatatca 22674874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 35030696 - 35030660
Alignment:
Q  135 gttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  35030696 gttgtaccaaaatagttgttcaaatatcattactctt 35030660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 173
Target Start/End: Original strand, 3058 - 3130
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttaa 173  Q
    |||||||| ||||||||| || ||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  3058 aatgaaaagagagcacaataaagttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattattcttaa 3130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 6e-19; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 6458886 - 6458950
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||| |||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||    
T  6458886 aaaagagagcacaacaaggttgtcccaaaaattatagcaaaaaagttgttcaaatatcattactc 6458950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 33893700 - 33893771
Alignment:
Q  100 aaatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    ||||||||| | |||||||||||||| ||||||||||||||| |||||| |||||||||||||||| |||||    
T  33893700 aaatgaaaagatagcacaacaaggttgtcccaaaagttgtagtaaaaaaattgttcaaatatcattgctctt 33893771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 101 - 175
Target Start/End: Original strand, 42364544 - 42364618
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttaaaa 175  Q
    |||||||| | | |||||||||||| ||||||||||||| | |||||||||||||||||||||||||||| ||||    
T  42364544 aatgaaaagataacacaacaaggttgtcccaaaagttgttggaaaaaagttgttcaaatatcattactctaaaaa 42364618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 101 - 166
Target Start/End: Complemental strand, 35595942 - 35595877
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcatta 166  Q
    |||||||||||||||||||||| || |||||||| |||||  ||||||||||||||||||||||||    
T  35595942 aatgaaaaaagagcacaacaagattgtcccaaaaattgtaataaaaaagttgttcaaatatcatta 35595877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 17574166 - 17574110
Alignment:
Q  115 acaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    ||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  17574166 acaacaaggttgtcccaaaagttgtaccaaaatagttgttcaaatatcattactctt 17574110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 101 - 180
Target Start/End: Original strand, 3849613 - 3849692
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttaaaagaaag 180  Q
    |||||||| | |||||||||||||| || |||||||||||||||||||| |||||| |||||| ||||||| ||| ||||    
T  3849613 aatgaaaagatagcacaacaaggttgtctcaaaagttgtagcaaaaaagatgttcatatatcactactctttaaaaaaag 3849692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 37821084 - 37821026
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctta 172  Q
    |||||||||||| |||||||||||||| ||||| |||||||||||||||| ||||||||    
T  37821084 cacaacaaggttgtcccaaaagttgtaccaaaatagttgttcaaatatcactactctta 37821026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 12612973 - 12612906
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattact 168  Q
    ||||| || |||| ||||||||||| |||||||||||||| |||||  ||||||||||||||||||||    
T  12612973 aatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaatggttgttcaaatatcattact 12612906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 14522909 - 14522856
Alignment:
Q  112 agcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcatt 165  Q
    ||||||| ||| || |||||||||||||||||||||||||||||||||| ||||    
T  14522909 agcacaataagattgtcccaaaagttgtagcaaaaaagttgttcaaataacatt 14522856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 18729229 - 18729164
Alignment:
Q  105 aaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    |||| ||| |||||||||||| |||||||||||||| ||||| |||||||||||||| | ||||||    
T  18729229 aaaagagaacacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatattactactct 18729164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 21771416 - 21771359
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||||||||||| ||||||||||| || ||||| |||||||||||||||| |||||||    
T  21771416 cacaacaaggttgtcccaaaagttataccaaaagagttgttcaaatatcactactctt 21771359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 11878547 - 11878606
Alignment:
Q  106 aaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcatta 166  Q
    ||||||||||||| |||||| |||||||| |||||| ||||||||||||||||||| ||||    
T  11878547 aaaaagagcacaataaggttgtcccaaaaattgtag-aaaaaagttgttcaaatattatta 11878606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 114 - 170
Target Start/End: Complemental strand, 25585399 - 25585343
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    |||||||| ||| |||||||||||||| ||||| |||||||||||||| ||||||||    
T  25585399 cacaacaaagttctcccaaaagttgtaacaaaatagttgttcaaatattattactct 25585343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 34693159 - 34693104
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||||||||||||| |||||||||| ||||| |||| ||||||||||| |||||    
T  34693159 cacaacaaggttatcctaaaagttgtatcaaaagagttattcaaatatcactactc 34693104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 39032547 - 39032492
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||||||||| |||||||| ||||| ||||| |||||||||||||||| |||||    
T  39032547 cacaacaaggttgtcccaaaaattgtatcaaaagagttgttcaaatatcactactc 39032492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 3031949 - 3032018
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagc-aaaaaagttgttcaaatatcattactc 169  Q
    |||||||| | |||||||||||||| | |||||| || |||| ||||||||| |||||||||||||||||    
T  3031949 aatgaaaagatagcacaacaaggttgtaccaaaaattatagcaaaaaaagttcttcaaatatcattactc 3032018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 9940169 - 9940238
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 170  Q
    |||||||| |||| ||||||| ||| ||| |||| ||||| ||||| |||| ||||||||||||||||||    
T  9940169 aatgaaaagagagaacaacaaagttgtcctaaaaattgtatcaaaatagttattcaaatatcattactct 9940238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 38919961 - 38920022
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatc 162  Q
    ||||| || |||| ||||||||||| ||| |||||||||| ||||| |||||||||||||||    
T  38919961 aatgagaagagagaacaacaaggttgtcctaaaagttgtaccaaaagagttgttcaaatatc 38920022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 12203260 - 12203328
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    ||||| || |||| |||||||| || || ||||||||||| ||||| |||||||||||||| |||||||    
T  12203260 aatgagaagagaggacaacaagattgtcacaaaagttgtaccaaaagagttgttcaaatattattactc 12203328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 35616748 - 35616689
Alignment:
Q  110 agagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||| ||||||||||| |||||||| || || ||||| |||||||||||||||| |||||    
T  35616748 agagaacaacaaggttgtcccaaaatttataccaaaatagttgttcaaatatcactactc 35616689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 35924384 - 35924455
Alignment:
Q  100 aaatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||| |||| |||| ||||||||||| || ||||| ||||  ||||| |||||| |||||||||||||||||    
T  35924384 aaataaaaagagagaacaacaaggttgtctcaaaaattgtttcaaaagagttgtacaaatatcattactctt 35924455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 166
Target Start/End: Complemental strand, 22864336 - 22864270
Alignment:
Q  100 aaatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcatta 166  Q
    |||| |||| |||| ||||||| ||| |||||||| || || ||||| |||||||||||||||||||    
T  22864336 aaataaaaagagagaacaacaacgttgtcccaaaaattataacaaaatagttgttcaaatatcatta 22864270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 166
Target Start/End: Complemental strand, 43153016 - 43152951
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcatta 166  Q
    ||||| || |||| ||||||| ||| ||| || ||||||| ||||| |||||||||||||||||||    
T  43153016 aatgagaagagagaacaacaaagttgtcctaagagttgtaccaaaatagttgttcaaatatcatta 43152951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 17153 - 17221
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||||| |||||||| ||||||| || ||||||||||||||||||| ||||| ||||||| ||||||    
T  17153 aatgaaaagagagcacatcaaggttgtcacaaaagttgtagcaaaaaaattgtttaaatatctttactc 17221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 145175 - 145230
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||||||||| |||||||||||||| ||||| |||||||||||||||| |||||    
T  145175 cacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactc 145230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 48782 - 48839
Alignment:
Q  114 cacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 171  Q
    |||||||||||| |||||||| ||||| ||||| | ||||||||||||||||||||||    
T  48782 cacaacaaggttgtcccaaaaattgtatcaaaagaattgttcaaatatcattactctt 48839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 1787 - 1735
Alignment:
Q  117 aacaaggttatcccaaaagttgtagcaaaaaagttgttcaaatatcattactc 169  Q
    |||||| || |||||||||||||| ||||| |||||||||||||||| |||||    
T  1787 aacaagattgtcccaaaagttgtaccaaaagagttgttcaaatatcactactc 1735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 1025 - 1095
Alignment:
Q  101 aatgaaaaaagagcacaacaaggttatcccaaaagttgtagcaaaaaagttgttcaaata-tcattactct 170  Q
    |||||||| |||| ||||||| |||||| ||||||||||| ||||| ||||||  ||||| ||||||||||    
T  1025 aatgaaaagagagaacaacaaagttatctcaaaagttgtaccaaaatagttgtcaaaatattcattactct 1095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University