View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1883_high_19 (Length: 272)
Name: NF1883_high_19
Description: NF1883
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1883_high_19 |
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Alignment Details
Target: chr1 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 40585670 - 40585420
Alignment:
| Q |
1 |
tagtttaacaaaaatatgcaacaaataattcacttgtttaactggtaacaatatcttaatcacatttgcagaacaagaaaagcacatgtggatgccacta |
100 |
Q |
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| T |
40585670 |
tagtttaacacaaatatgcaacaaataattcacttgtttaactggtaacaatatcttaatcacattggcagaacaagaaaagcacatgtggatgtcacta |
40585571 |
T |
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| Q |
101 |
tccaaaattctctgaaacaaataaattaaaagtaaaactctcaaactcaaatgcttggcaggcatttcatacaattatttgtcagaacagtgtactattg |
200 |
Q |
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| T |
40585570 |
tccaaaattctctgaaacaaataaattaaaagtaaaactctcaaactcaaatgcttggcaggcatttcatacaattatttgtcagaacagtgtactattg |
40585471 |
T |
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| Q |
201 |
tttccactttacttggtcctgtggtataacattggctgcactcttcactgt |
251 |
Q |
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| T |
40585470 |
tttccactttacttggtcctgtggtataacattggctgcactcttcactgt |
40585420 |
T |
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