View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1884-Insertion-2 (Length: 823)
Name: NF1884-Insertion-2
Description: NF1884
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1884-Insertion-2 |
 |  |
|
| [»] chr4 (2 HSPs) |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 772; Significance: 0; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 772; E-Value: 0
Query Start/End: Original strand, 7 - 823
Target Start/End: Complemental strand, 22085653 - 22084834
Alignment:
| Q |
7 |
aacattatagtagaaaacatggtgagaagaagtggaagtgtgaaaagtgttccaagaaatatgcagttcaatctgattggaaagctcatagcaagatttg |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22085653 |
aacattatagtagaaaacatggtgagaagaagtggaagtgtgaaaagtgttccaagaaatatgcagttcaatctgattggaaagctcatagcaagatttg |
22085554 |
T |
 |
| Q |
107 |
tggaactagagagtacaaatgtgattgtggcacaattttctccaggtatatactatatatttactatctttcgccatagcagtcactactggcaccgttg |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22085553 |
tggaactagagagtacaaatgtgattgtggcacaattttctccaggtatatactatatatttactatctttcgccatagcagtcactactggcaccgttg |
22085454 |
T |
 |
| Q |
207 |
gatttgagatagaaacaatttacattttctaaactcggatccagtgactccgtagtggctgcaatatttggaagctatagaaaattgaaacactaaaaga |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22085453 |
gatttgagatagaaacaatttacattttctaaactcggatccagtgactccgtagtggctgcaatatttggaagcaatagaaaattgaaacactaaaaga |
22085354 |
T |
 |
| Q |
307 |
atatagaaatcttggtgatcaattagtttaaacgtttagtctatatccaacaattagcatttaaatttcaaatgtccttaatttcatgattttaatggcg |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22085353 |
atatagaaatcttggtgatcaattagtttaaacgtttagtctatatccaacaattagcatttaaatttcaaatgtccttaatttcatgattttaatggcg |
22085254 |
T |
 |
| Q |
407 |
gtcgcagttgcggccaatgcaaccgaaaaagtagttttgatatggttgggtagatctcaaaatcttttatattgctgcaatttaaatgccttcttaaatc |
506 |
Q |
| |
|
|| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22085253 |
gttgcagttgcggccaatgcaaccgaaaaagaagttttgatatggttgggtagatctcaaaatcttttatattgctgcaatttaaatgccttcttaaatc |
22085154 |
T |
 |
| Q |
507 |
attaagtttgattaatttaatggattggatgcatgtgctagatataattgaaggaatgtttgtatggaatagataataaatgaggaatgttaattgatgt |
606 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
22085153 |
attaagtttgattaatttaatggattggatgcatgtgctagatataattgaaggaatgtttgtatggaataaataataaatgaggaatgttaattgatgt |
22085054 |
T |
 |
| Q |
607 |
tcaactaattcatttatgtatttatttattatgtttgctaacaaatca-gaaggacagctttataacacatagagctttttgtgatgcattaactgaaca |
705 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22085053 |
tcaactaattcatttatgtatttatttattatgtgtgctaacaaatcaggaaggacagcttcataacacatagagctttttgtgatgcattaactgaaca |
22084954 |
T |
 |
| Q |
706 |
aagtgc-aagataacaacggttccggcagctttaagcaactttcggaatgatcatttgacgaatactcaaactccaagaattcctcata-ttttcctggt |
803 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
22084953 |
aagtgcaaagataacaacggttccggcagctttaagcaactttcggaatgatcatttgacgaatactcaaactccaagaattcctcatatttttcctggt |
22084854 |
T |
 |
| Q |
804 |
tttcagtttcactcggaatt |
823 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
22084853 |
tttcagtttcactcggaatt |
22084834 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 30518286 - 30518166
Alignment:
| Q |
16 |
gtagaaaacatggtgagaagaagtggaagtgtgaaaagtgttccaagaaatatgcagttcaatctgattggaaagctcatagcaagatttgtggaactag |
115 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||| ||||| || || ||||| ||||| || |||||||||||||| || | ||||| ||||| |
|
|
| T |
30518286 |
gtagaaagcatggtgaaaagaagtggaagtgtgagaagtgctcaaaacgttatgctgttcagtcagattggaaagctcactcaaaaacatgtggtactag |
30518187 |
T |
 |
| Q |
116 |
agagtacaaatgtgattgtgg |
136 |
Q |
| |
|
||| ||||||||||| ||||| |
|
|
| T |
30518186 |
agaatacaaatgtgactgtgg |
30518166 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 99; Significance: 2e-48; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 40040775 - 40040917
Alignment:
| Q |
14 |
tagtagaaaacatggtgagaagaagtggaagtgtgaaaagtgttccaagaaatatgcagttcaatctgattggaaagctcatagcaagatttgtggaact |
113 |
Q |
| |
|
||||||||| || ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||| |
|
|
| T |
40040775 |
tagtagaaagcacggtgagaagaagtggaagtgtgataagtgttctaagaaatatgcagttcaatctgattggaaggctcatagtaagatttgtggcact |
40040874 |
T |
 |
| Q |
114 |
agagagtacaaatgtgattgtggcacaattttctccaggtata |
156 |
Q |
| |
|
| |||||||| |||||||||||||||| | ||||||||||||| |
|
|
| T |
40040875 |
aaagagtacagatgtgattgtggcacactattctccaggtata |
40040917 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 38895995 - 38895872
Alignment:
| Q |
16 |
gtagaaaacatggtgagaagaagtggaagtgtgaaaagtgttccaagaaatatgcagttcaatctgattggaaagctcatagcaagatttgtggaactag |
115 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||||| ||||| || || ||||| |||||||| ||||||||||| || |||| |||||| ||||| |
|
|
| T |
38895995 |
gtaggaaacacggtgagaagaagtggaagtgtgagaagtgctcaaaattttatgctgttcaatcggattggaaagcacactcaaagacttgtggtactag |
38895896 |
T |
 |
| Q |
116 |
agagtacaaatgtgattgtggcac |
139 |
Q |
| |
|
||| |||||||||||||||||||| |
|
|
| T |
38895895 |
agaatacaaatgtgattgtggcac |
38895872 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 42898288 - 42898364
Alignment:
| Q |
18 |
agaaaacatggtgagaagaagtggaagtgtgaaaagtgttccaagaaatatgcagttcaatctgattggaaagctca |
94 |
Q |
| |
|
||||| || ||||||||||||||||| ||||| ||||| || ||||| |||||||||||||| || ||||||||||| |
|
|
| T |
42898288 |
agaaagcacggtgagaagaagtggaaatgtgacaagtgctctaagaagtatgcagttcaatcagactggaaagctca |
42898364 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 76; Significance: 1e-34; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 7 - 154
Target Start/End: Original strand, 40749369 - 40749516
Alignment:
| Q |
7 |
aacattatagtagaaaacatggtgagaagaagtggaagtgtgaaaagtgttccaagaaatatgcagttcaatctgattggaaagctcatagcaagatttg |
106 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| | || | ||| |
|
|
| T |
40749369 |
aacattttagtagaaaacatggcgagaagaaatggaagtgtgataagtgttccaagaaatatgcagtccaatctgattggaaagctcacactaaaacttg |
40749468 |
T |
 |
| Q |
107 |
tggaactagagagtacaaatgtgattgtggcacaattttctccaggta |
154 |
Q |
| |
|
||| |||||||| || || ||||||||||| ||| | ||||| ||||| |
|
|
| T |
40749469 |
tggtactagagaatataagtgtgattgtggtacactcttctcaaggta |
40749516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 44150933 - 44150818
Alignment:
| Q |
21 |
aaacatggtgagaagaagtggaagtgtgaaaagtgttccaagaaatatgcagttcaatctgattggaaagctcatagcaagatttgtggaactagagagt |
120 |
Q |
| |
|
||||||||||||||||| ||||| ||||| ||||| || || | |||||| |||||||| |||||||| ||||| || | |||||| ||||| || | |
|
|
| T |
44150933 |
aaacatggtgagaagaaatggaaatgtgacaagtgctctaaaagatatgctgttcaatcagattggaaggctcaccagaaaacttgtggtactagggaat |
44150834 |
T |
 |
| Q |
121 |
acaaatgtgattgtgg |
136 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
44150833 |
acaaatgtgattgtgg |
44150818 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 67; Significance: 2e-29; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 5788859 - 5788741
Alignment:
| Q |
18 |
agaaaacatggtgagaagaagtggaagtgtgaaaagtgttccaagaaatatgcagttcaatctgattggaaagctcatagcaagatttgtggaactagag |
117 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||| | |||||| ||||||| |
|
|
| T |
5788859 |
agaaagcatggtgagaagaagtggaaatgtgaaaagtgttcaaagaaatatgctgttcaatctgattggaaagctcattccaaaacttgtggcactagag |
5788760 |
T |
 |
| Q |
118 |
agtacaaatgtgattgtgg |
136 |
Q |
| |
|
| || | |||||| ||||| |
|
|
| T |
5788759 |
aatatagatgtgactgtgg |
5788741 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 16 - 153
Target Start/End: Original strand, 33186723 - 33186860
Alignment:
| Q |
16 |
gtagaaaacatggtgagaagaagtggaagtgtgaaaagtgttccaagaaatatgcagttcaatctgattggaaagctcatagcaagatttgtggaactag |
115 |
Q |
| |
|
||||||||||||||||||| |||||||| ||||| || ||||| ||||||||||| ||||||||||||||||||||||| || ||||||| |||| |
|
|
| T |
33186723 |
gtagaaaacatggtgagaaaaagtggaaatgtgagaaatgttctaagaaatatgctgttcaatctgattggaaagctcactctaaagtttgtggttctag |
33186822 |
T |
 |
| Q |
116 |
agagtacaaatgtgattgtggcacaattttctccaggt |
153 |
Q |
| |
|
|||||| |||||||||||||| || |||| ||||||| |
|
|
| T |
33186823 |
agagtataaatgtgattgtggaaccgttttttccaggt |
33186860 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 715
Target Start/End: Complemental strand, 5788054 - 5787997
Alignment:
| Q |
658 |
ggacagctttataacacatagagctttttgtgatgcattaactgaacaaagtgcaaga |
715 |
Q |
| |
|
|||||| || |||||||||||||| ||||||||||||||| | ||| | ||||||||| |
|
|
| T |
5788054 |
ggacagtttcataacacatagagcattttgtgatgcattagcagaagagagtgcaaga |
5787997 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 67; Significance: 2e-29; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 12804648 - 12804526
Alignment:
| Q |
17 |
tagaaaacatggtgagaagaagtggaagtgtgaaaagtgttccaagaaatatgcagttcaatctgattggaaagctcatagcaagatttgtggaactaga |
116 |
Q |
| |
|
|||||| ||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||| |||| |||||| ||||| |
|
|
| T |
12804648 |
tagaaagcatggtgagaaaaagtggaaatgtgaaaagtgttctaagaaatatgctgttcaatctgattggaaagctcattctaagacttgtggtactagg |
12804549 |
T |
 |
| Q |
117 |
gagtacaaatgtgattgtggcac |
139 |
Q |
| |
|
||||| | |||||| |||||||| |
|
|
| T |
12804548 |
gagtatagatgtgactgtggcac |
12804526 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 28496246 - 28496104
Alignment:
| Q |
14 |
tagtagaaaacatggtgagaagaagtggaagtgtgaaaagtgttccaagaaatatgcagttcaatctgattggaaagctcatagcaagatttgtggaact |
113 |
Q |
| |
|
||||||||| || ||||||||||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||||| || | ||||| || |
|
|
| T |
28496246 |
tagtagaaagcacggtgagaagaagtggaaatgtgaaaaatgttccaaaaaatatgcagtccaatctgattggaaagctcatacaaaaacatgtggtaca |
28496147 |
T |
 |
| Q |
114 |
agagagtacaaatgtgattgtggcacaattttctccaggtata |
156 |
Q |
| |
|
||||| ||||||||||| |||||||| | ||||| ||||||| |
|
|
| T |
28496146 |
agagaatacaaatgtgactgtggcaccctcttctcaaggtata |
28496104 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 36989328 - 36989467
Alignment:
| Q |
16 |
gtagaaaacatggtgagaagaagtggaagtgtgaaaagtgttccaagaaatatgcagttcaatctgattggaaagctcatagcaagatttgtggaactag |
115 |
Q |
| |
|
||||||| ||||||||||| |||||||| ||||| |||||||| ||||||||||| |||||||||||||||||||||||| ||| || ||||| || || |
|
|
| T |
36989328 |
gtagaaagcatggtgagaaaaagtggaaatgtgataagtgttctaagaaatatgctgttcaatctgattggaaagctcattccaaaatatgtggtacaag |
36989427 |
T |
 |
| Q |
116 |
agagtacaaatgtgattgtggcacaattttctccaggtat |
155 |
Q |
| |
|
|| ||||||||||| ||||| || || || ||||||||| |
|
|
| T |
36989428 |
ggaatacaaatgtgactgtggaaccatcttttccaggtat |
36989467 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 12774926 - 12775063
Alignment:
| Q |
17 |
tagaaaacatggtgagaagaagtggaagtgtgaaaagtgttccaagaaatatgcagttcaatctgattggaaagctcatagcaagatttgtggaactaga |
116 |
Q |
| |
|
|||||| ||||||||||| || |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||| || | |||||| |||| |
|
|
| T |
12774926 |
tagaaagcatggtgagaaaaaatggaagtgtgaaaagtgttctaagaagtatgctgttcaatctgattggaaagctcattctaaaacttgtggtactaag |
12775025 |
T |
 |
| Q |
117 |
gagtacaaatgtgattgtggcacaattttctccaggta |
154 |
Q |
| |
|
||||| | |||||| |||||||| | ||||||||||| |
|
|
| T |
12775026 |
gagtatagatgtgactgtggcactctcttctccaggta |
12775063 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 27 - 139
Target Start/End: Original strand, 42287116 - 42287228
Alignment:
| Q |
27 |
ggtgagaagaagtggaagtgtgaaaagtgttccaagaaatatgcagttcaatctgattggaaagctcatagcaagatttgtggaactagagagtacaaat |
126 |
Q |
| |
|
||||||||||||||||| |||||||| || || ||||||||||| ||||||||||| |||||||| ||| |||| |||||| |||||||| || | || |
|
|
| T |
42287116 |
ggtgagaagaagtggaaatgtgaaaaatgctcaaagaaatatgctgttcaatctgactggaaagcacattctaagacttgtggtactagagaatatagat |
42287215 |
T |
 |
| Q |
127 |
gtgattgtggcac |
139 |
Q |
| |
|
||||||||||||| |
|
|
| T |
42287216 |
gtgattgtggcac |
42287228 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 7 - 156
Target Start/End: Complemental strand, 31644205 - 31644056
Alignment:
| Q |
7 |
aacattatagtagaaaacatggtgagaagaagtggaagtgtgaaaagtgttccaagaaatatgcagttcaatctgattggaaagctcatagcaagatttg |
106 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||||| ||||| ||||| || |||| ||||| ||||| ||||||||||||||||| || | || |
|
|
| T |
31644205 |
aacattatagtagaaaacatggtgagaaaaaatggaaatgtgataagtgctcaaagatctatgctgttcattctgattggaaagctcactctaaaacctg |
31644106 |
T |
 |
| Q |
107 |
tggaactagagagtacaaatgtgattgtggcacaattttctccaggtata |
156 |
Q |
| |
|
||| ||| |||| || |||||||||||||| || |||| |||||||||| |
|
|
| T |
31644105 |
tggtactcgagaatataaatgtgattgtggtacccttttttccaggtata |
31644056 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 4160376 - 4160485
Alignment:
| Q |
27 |
ggtgagaagaagtggaagtgtgaaaagtgttccaagaaatatgcagttcaatctgattggaaagctcatagcaagatttgtggaactagagagtacaaat |
126 |
Q |
| |
|
||||||||||||||||||||||| || ||||| || |||||||||||| || ||||||||||||||| ||| |||||||| |||| |||||| || | |
|
|
| T |
4160376 |
ggtgagaagaagtggaagtgtgagaaatgttctaaacgatatgcagttcagtcggattggaaagctcattccaaaatttgtggcactaaagagtataagt |
4160475 |
T |
 |
| Q |
127 |
gtgattgtgg |
136 |
Q |
| |
|
|||| ||||| |
|
|
| T |
4160476 |
gtgactgtgg |
4160485 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 50788952 - 50788819
Alignment:
| Q |
21 |
aaacatggtgagaagaagtggaagtgtgaaaagtgttccaagaaatatgcagttcaatctgattggaaagctcatagcaagatttgtggaactagagagt |
120 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||| || ||||| ||||| ||||||||||||||||| || ||| |||| |||||| || ||||| | |
|
|
| T |
50788952 |
aaacatggtgagaagaaatggaagtgtgataagtgctctaagaagtatgctgttcaatctgattggaaggcacattctaagacttgtggcaccagagaat |
50788853 |
T |
 |
| Q |
121 |
acaaatgtgattgtggcacaattttctccaggta |
154 |
Q |
| |
|
| | ||||| |||||||| | ||||||||||| |
|
|
| T |
50788852 |
ataggtgtgactgtggcactctcttctccaggta |
50788819 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 655 - 715
Target Start/End: Complemental strand, 31641957 - 31641897
Alignment:
| Q |
655 |
gaaggacagctttataacacatagagctttttgtgatgcattaactgaacaaagtgcaaga |
715 |
Q |
| |
|
|||||| ||||| ||||| |||||||| |||||||||||||| ||||| ||||||||||| |
|
|
| T |
31641957 |
gaaggatagcttcataactcatagagcattttgtgatgcattggctgaagaaagtgcaaga |
31641897 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 52248493 - 52248369
Alignment:
| Q |
16 |
gtagaaaacatggtgagaagaagtggaagtgtgaaaagtgttccaagaaatatgcagttcaatctgattggaaagctcatagcaagatttgtggaactag |
115 |
Q |
| |
|
||||||| |||||||||||||| ||||| |||||| ||||| || ||||| || | ||| ||||| ||||| ||||| |||| ||||||||||| |
|
|
| T |
52248493 |
gtagaaagcatggtgagaagaaatggaaatgtgaacgttgttctaaaaaatacgctgcgaaatgtgatttgaaagttcatatgaagagctgtggaactag |
52248394 |
T |
 |
| Q |
116 |
agagtacaaatgtgattgtggcaca |
140 |
Q |
| |
|
|||||| |||||||||||||||||| |
|
|
| T |
52248393 |
agagtataaatgtgattgtggcaca |
52248369 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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