View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18841_high_4 (Length: 324)

Name: NF18841_high_4
Description: NF18841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18841_high_4
NF18841_high_4
[»] scaffold0163 (2 HSPs)
scaffold0163 (151-324)||(20174-20347)
scaffold0163 (1-146)||(20442-20589)
[»] chr1 (3 HSPs)
chr1 (151-324)||(20175619-20175792)
chr1 (33-146)||(20175887-20176002)
chr1 (151-316)||(14277607-14277772)
[»] chr3 (11 HSPs)
chr3 (151-324)||(2159524-2159697)
chr3 (151-324)||(40089200-40089373)
chr3 (151-322)||(6426999-6427170)
chr3 (151-322)||(8977538-8977709)
chr3 (1-146)||(2159792-2159939)
chr3 (1-146)||(40088958-40089105)
chr3 (151-322)||(9541828-9541999)
chr3 (153-280)||(48982983-48983110)
chr3 (151-273)||(28357117-28357239)
chr3 (196-298)||(25506963-25507065)
chr3 (34-138)||(28356908-28357014)
[»] chr5 (16 HSPs)
chr5 (151-322)||(27416823-27416994)
chr5 (151-322)||(20952553-20952724)
chr5 (151-322)||(18384432-18384603)
chr5 (151-322)||(26197803-26197974)
chr5 (151-322)||(33944012-33944183)
chr5 (151-309)||(18712282-18712440)
chr5 (153-309)||(15326331-15326487)
chr5 (153-280)||(5604880-5605007)
chr5 (265-324)||(21081406-21081465)
chr5 (151-298)||(22453391-22453538)
chr5 (151-298)||(24296131-24296277)
chr5 (151-312)||(24416887-24417048)
chr5 (151-312)||(30450160-30450321)
chr5 (151-307)||(724040-724196)
chr5 (34-138)||(24417151-24417257)
chr5 (151-223)||(19381287-19381359)
[»] scaffold0141 (1 HSPs)
scaffold0141 (147-319)||(30578-30750)
[»] scaffold0049 (2 HSPs)
scaffold0049 (147-319)||(84062-84234)
scaffold0049 (237-280)||(19303-19346)
[»] scaffold0572 (1 HSPs)
scaffold0572 (151-322)||(71-242)
[»] chr8 (11 HSPs)
chr8 (151-322)||(14887167-14887338)
chr8 (151-322)||(21208448-21208619)
chr8 (151-298)||(33597446-33597593)
chr8 (151-298)||(18237009-18237156)
chr8 (151-298)||(18246460-18246607)
chr8 (151-298)||(25046929-25047076)
chr8 (151-309)||(45494767-45494925)
chr8 (151-316)||(12919878-12920043)
chr8 (152-322)||(22835429-22835601)
chr8 (196-298)||(20748692-20748794)
chr8 (291-324)||(23745876-23745909)
[»] chr7 (13 HSPs)
chr7 (151-322)||(5387393-5387564)
chr7 (151-322)||(16137662-16137833)
chr7 (151-322)||(6539169-6539340)
chr7 (151-322)||(8505741-8505912)
chr7 (151-322)||(9540718-9540889)
chr7 (151-322)||(26353777-26353948)
chr7 (151-322)||(44902049-44902220)
chr7 (151-322)||(46501806-46501977)
chr7 (151-322)||(32103072-32103243)
chr7 (151-321)||(18663578-18663748)
chr7 (151-316)||(14640329-14640494)
chr7 (151-312)||(15179793-15179954)
chr7 (151-307)||(611020-611176)
[»] chr6 (5 HSPs)
chr6 (151-322)||(16902638-16902809)
chr6 (151-322)||(24927643-24927814)
chr6 (151-322)||(31361511-31361682)
chr6 (151-298)||(27746546-27746693)
chr6 (151-307)||(8999134-8999290)
[»] chr2 (7 HSPs)
chr2 (151-322)||(27165458-27165629)
chr2 (151-322)||(9509242-9509413)
chr2 (151-322)||(18655910-18656081)
chr2 (154-322)||(45019042-45019210)
chr2 (151-322)||(22906837-22907008)
chr2 (151-310)||(22103218-22103376)
chr2 (153-280)||(1795265-1795392)
[»] scaffold0145 (1 HSPs)
scaffold0145 (159-321)||(33387-33549)
[»] scaffold0254 (1 HSPs)
scaffold0254 (151-322)||(13456-13627)
[»] chr4 (10 HSPs)
chr4 (151-322)||(6696910-6697081)
chr4 (159-321)||(16269749-16269911)
chr4 (151-322)||(17156108-17156279)
chr4 (151-309)||(14936587-14936745)
chr4 (151-312)||(26816548-26816709)
chr4 (151-312)||(54695344-54695505)
chr4 (151-307)||(116437-116593)
chr4 (33-138)||(54695134-54695241)
chr4 (34-138)||(26816800-26816906)
chr4 (68-138)||(17156382-17156454)
[»] scaffold0611 (1 HSPs)
scaffold0611 (154-320)||(2640-2806)
[»] scaffold0764 (1 HSPs)
scaffold0764 (151-322)||(6357-6528)
[»] scaffold0313 (2 HSPs)
scaffold0313 (151-322)||(92-263)
scaffold0313 (151-322)||(14249-14420)
[»] scaffold0059 (1 HSPs)
scaffold0059 (151-316)||(45902-46067)
[»] scaffold0003 (1 HSPs)
scaffold0003 (151-322)||(153264-153435)
[»] scaffold0142 (1 HSPs)
scaffold0142 (151-322)||(32384-32555)
[»] scaffold0010 (2 HSPs)
scaffold0010 (151-298)||(261151-261298)
scaffold0010 (151-298)||(263454-263601)
[»] scaffold0233 (1 HSPs)
scaffold0233 (151-312)||(6951-7112)
[»] scaffold0028 (2 HSPs)
scaffold0028 (151-312)||(99858-100019)
scaffold0028 (34-138)||(99649-99755)
[»] scaffold0021 (1 HSPs)
scaffold0021 (196-280)||(167592-167676)


Alignment Details
Target: scaffold0163 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 151 - 324
Target Start/End: Complemental strand, 20347 - 20174
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  20347 cacttttaacatccatttgaaaaagtttgatttgtttatgtgcagcatatgcaagtaaaattctaattgcttctaaccttgctatcggagcataagtctc 20248  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttaccat 324  Q
    ||||||||||||||||||||||| |||||||| ||||||||||| |||| | ||||||||||| || |||||||    
T  20247 atcatagtcaataccttcttgttgattataaccttgagcaactagtcttgctttgtttctgaccactttaccat 20174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 20589 - 20442
Alignment:
Q  1 gacttgaacaattaagagatcttgattatgaatttttctaaaaagagttgtgtcaataggtccacgagaaaaatcatttttgattaaaaatgtgctaagt 100  Q
    ||||||||||||||| || ||||| ||| || ||||||| ||||||||||| || ||| ||||||||| |||||||||||||| |||||| || || |||    
T  20589 gacttgaacaattaaaaggtcttggttaagactttttctgaaaagagttgtatcgatatgtccacgagtaaaatcatttttgagtaaaaaggtacttagt 20490  T
Q  101 ctt--ataccaagatcaatgagcttgtttgagaccatataaggctttt 146  Q
    |||  |||||||| || | |||||||||||||||||||||||||||||    
T  20489 ctttcataccaagctcgaggagcttgtttgagaccatataaggctttt 20442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 8e-58; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 151 - 324
Target Start/End: Complemental strand, 20175792 - 20175619
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    |||||||||| |||||||||||||||||||| ||||| |||||| |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||    
T  20175792 cacttttaacgtccatttgaaaaagtttgatttgtttatgtgcagcatatgcaagcaaaattctaattgcttctaaccttgctaccggagcataagtctc 20175693  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttaccat 324  Q
    ||| ||||||||||||||||||| |||||||| |||||||||||  ||| | |||||||||||||| |||||||    
T  20175692 atcgtagtcaataccttcttgttgattataaccttgagcaactagccttgctttgtttctgacaactttaccat 20175619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 20176002 - 20175887
Alignment:
Q  33 tttttctaaaaagagttgtgtcaataggtccacgagaaaaatcatttttgattaaaaatgtgctaagtctt--ataccaagatcaatgagcttgtttgag 130  Q
    ||||||| || |||||||| || ||| |||||||||||||||||||||||| |||||| || || ||||||  |||||||| || | |||||||||||||    
T  20176002 tttttctgaagagagttgtatcgatatgtccacgagaaaaatcatttttgagtaaaaaagtacttagtctttcataccaagctcgaggagcttgtttgag 20175903  T
Q  131 accatataaggctttt 146  Q
    ||||||||||||||||    
T  20175902 accatataaggctttt 20175887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 316
Target Start/End: Original strand, 14277607 - 14277772
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    |||||||||||||||||||||| ||||| || | ||| || |   |||||| ||| | ||| |  || ||||| ||||| || || |||||| | || ||    
T  14277607 cacttttaacatccatttgaaagagtttaatatttttatgagatgcatatgtaagaagaatacgtatagcttctaacctggcaactggagcaaatgtttc 14277706  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaac 316  Q
    ||||||||||||||||||||||| ||| || | ||| || ||||||||  | || |||||||||||    
T  14277707 atcatagtcaataccttcttgttgattgtagccttgtgctactaatctagctttatttctgacaac 14277772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 2e-55; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 151 - 324
Target Start/End: Complemental strand, 2159697 - 2159524
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    |||||||||| |||||||||||||||||||| ||||| |||||| |||||||||| ||||||||||| ||||| ||||||||||| ||||||||||||||    
T  2159697 cacttttaacgtccatttgaaaaagtttgatttgtttatgtgcagcatatgcaagcaaaattctaatagcttctaaccttgctaccggagcataagtctc 2159598  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttaccat 324  Q
    ||| ||||||||||||||||||| |||||||| |||||||||||  ||| | |||||||||||||| |||||||    
T  2159597 atcgtagtcaataccttcttgttgattataaccttgagcaactagccttgctttgtttctgacaactttaccat 2159524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 151 - 324
Target Start/End: Original strand, 40089200 - 40089373
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||| ||||||||||||||||||||||| |||||||| || ||||||||||||||    
T  40089200 cacttttaacatccatttgaaaaagtttgatttgtttatgtgcagcataagcaagtaaaattctaattgcttctaaccttgcgaccggagcataagtctc 40089299  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttaccat 324  Q
    ||||||||||||||||||||||| |||||||| |||||| |||| |||| | |||||||| || || |||||||    
T  40089300 atcatagtcaataccttcttgttgattataaccttgagctactagtcttgctttgtttcttaccactttaccat 40089373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 151 - 322
Target Start/End: Complemental strand, 6427170 - 6426999
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||| ||||| | |||||  || ||||| |||||||| || || ||| | |||||    
T  6427170 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcataagcaagaagaattcggatggcttctaaccttgcaactggtgcaaaggtctc 6427071  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || |||| |||||||||||| ||| | ||||||||||||||||||||    
T  6427070 atcatagtcaataccttcttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaaccttacc 6426999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 151 - 322
Target Start/End: Complemental strand, 8977709 - 8977538
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||| ||||| | |||||| || ||||| |||||||| || || ||| | |||||    
T  8977709 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcataagcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctc 8977610  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || |||| |||||||||||| ||| | |||||||||||||| |||||    
T  8977609 atcatagtcaataccttcttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttacc 8977538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 2159939 - 2159792
Alignment:
Q  1 gacttgaacaattaagagatcttgattatgaatttttctaaaaagagttgtgtcaataggtccacgagaaaaatcatttttgattaaaaatgtgctaagt 100  Q
    ||||||||||||||| || ||||| ||| || ||||||| || |||||||| || ||| |||||||||||||||||||||||| |||||| || || |||    
T  2159939 gacttgaacaattaaaaggtcttggttaagactttttctgaagagagttgtatcgatatgtccacgagaaaaatcatttttgagtaaaaaagtacttagt 2159840  T
Q  101 ctt--ataccaagatcaatgagcttgtttgagaccatataaggctttt 146  Q
    |||  |||||||| || | |||||||||||||||||||||||||||||    
T  2159839 ctttcataccaagctcgaggagcttgtttgagaccatataaggctttt 2159792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 40088958 - 40089105
Alignment:
Q  1 gacttgaacaattaagagatcttgattatgaatttttctaaaaagagttgtgtcaataggtccacgagaaaaatcatttttgattaaaaatgtgctaagt 100  Q
    ||||||||||||||| || ||||| ||| || ||||||| || |||||||| || ||| |||||||||||||||||||||||| |||||| || || |||    
T  40088958 gacttgaacaattaaaaggtcttggttaagactttttctgaagagagttgtatcgatatgtccacgagaaaaatcatttttgagtaaaaaagtacttagt 40089057  T
Q  101 ctt--ataccaagatcaatgagcttgtttgagaccatataaggctttt 146  Q
    |||  |||||||| || | |||||||||||||||||||||||||||||    
T  40089058 ctttcataccaagctcgaggagcttgtttgagaccatataaggctttt 40089105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 151 - 322
Target Start/End: Complemental strand, 9541999 - 9541828
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||| ||||| | |||||| || ||||| |||||||| || || ||| | |||||    
T  9541999 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcataagcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctc 9541900  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || |||| |||||||||||| | | | |||||||||||||| |||||    
T  9541899 atcatagtcaataccttcttgttggttgtaaccttgagcaactaaccgtgctttgtttctgacaactttacc 9541828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 153 - 280
Target Start/End: Complemental strand, 48983110 - 48982983
Alignment:
Q  153 cttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctcat 252  Q
    |||||||||||||||||||||||||| || | ||| || |   |||||||||| | ||| | ||||||||| |||||||| || |||||| | || ||||    
T  48983110 cttttaacatccatttgaaaaagtttaatatttttatgagatgcatatgcaagaagaatacgaattgcttctaaccttgcaactggagcaaatgtttcat 48983011  T
Q  253 catagtcaataccttcttgttaattata 280  Q
    ||||||| |||||||| |||| ||||||    
T  48983010 catagtctataccttcctgttgattata 48982983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 151 - 273
Target Start/End: Original strand, 28357117 - 28357239
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||| | ||| || | ||| || |   |||||||||| | ||||||||||||||| ||||| ||||| |||||| | || ||    
T  28357117 cacttttgacatccatttgaaataatttaatatttttatgagatgcatatgcaagaagaattctaattgcttctaacctggctaccggagcaaaggtttc 28357216  T
Q  251 atcatagtcaataccttcttgtt 273  Q
    ||| || ||||||||||||||||    
T  28357217 atcgtaatcaataccttcttgtt 28357239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 298
Target Start/End: Original strand, 25506963 - 25507065
Alignment:
Q  196 catatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctcatcatagtcaataccttcttgttaattataacattgagcaactaa 295  Q
    |||||||||| | |||||| || ||||| |  |||||||| ||||||||||| ||||||||||| || |||||||||| ||| || | ||| || |||||    
T  25506963 catatgcaagaagaattcttatagcttccagtcttgctactggagcataagtttcatcatagtcgattccttcttgttgattgtatccttgtgccactaa 25507062  T
Q  296 tct 298  Q
    |||    
T  25507063 tct 25507065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 138
Target Start/End: Original strand, 28356908 - 28357014
Alignment:
Q  34 ttttctaaaaagagttgtgtcaataggtccacgagaaaaatcatttttgattaaaaatgtgctaagtctt--ataccaagatcaatgagcttgtttgaga 131  Q
    |||||||||||| ||||| |||||   ||| | ||||||||||||||||||||| || ||||| |  |||  |||||||| || | |||||||||| |||    
T  28356908 ttttctaaaaagggttgtatcaatttttcctctagaaaaatcatttttgattaagaacgtgcttaacctttcataccaagctcgaggagcttgtttaaga 28357007  T
Q  132 ccatata 138  Q
    |||||||    
T  28357008 ccatata 28357014  T

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Target: chr5 (Bit Score: 88; Significance: 3e-42; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 151 - 322
Target Start/End: Complemental strand, 27416994 - 27416823
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||| ||||| | ||||||||||||||| |||||||| || || ||| |||||||    
T  27416994 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcataagcaagaagaattctaattgcttctaaccttgcaactggtgcaaaagtctc 27416895  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || |||| |||||||||||| ||| | ||||||||||||||||||||    
T  27416894 atcatagtcaataccttcttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaaccttacc 27416823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 151 - 322
Target Start/End: Complemental strand, 20952724 - 20952553
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| ||   ||| |||||| |||| ||||| |  |||||||| ||||| ||||||||||| || ||| |||||||    
T  20952724 cacttttcacatccatttgaaaaagtttaatacttttatgtgcagcataagcaagaagtattctaatggcttctaaccttgctactggtgcaaaagtctc 20952625  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    ||||||||||||||||||||||| ||| |||| |||||| ||||  ||| | ||||||||||||||||||||    
T  20952624 atcatagtcaataccttcttgttgattgtaaccttgagctactagccttgctttgtttctgacaaccttacc 20952553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 151 - 322
Target Start/End: Complemental strand, 18384603 - 18384432
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||| ||||| | |||||| || ||||| |||||||| || || ||| | |||||    
T  18384603 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcataagcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctc 18384504  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || |||| |||||||||||| ||| | |||||||||||||| |||||    
T  18384503 atcatagtcaataccttcttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttacc 18384432  T

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Target: chr5; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 151 - 322
Target Start/End: Original strand, 26197803 - 26197974
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||| ||||| | |||||| || ||||| |||||||| || || ||| | |||||    
T  26197803 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcataagcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctc 26197902  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || |||| |||||||||||| ||| | |||||||||||||| |||||    
T  26197903 atcatagtcaataccttcttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttacc 26197974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 151 - 322
Target Start/End: Complemental strand, 33944183 - 33944012
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||| ||||| | |||||| || ||||| |||||||| || || ||| | |||||    
T  33944183 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcataagcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctc 33944084  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || |||| |||||||||||| ||| | |||||||||||||| |||||    
T  33944083 atcatagtcaataccttcttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttacc 33944012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 151 - 309
Target Start/End: Complemental strand, 18712440 - 18712282
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| || ||||||||||||||||| |||  ||| || |   |||||||||| | |||||| || ||||| |  |||||||| ||||||||||| ||    
T  18712440 cactttttacgtccatttgaaaaagttttatgcatttatgagatgcatatgcaagaagaattcttatagcttccagtcttgctactggagcataagtttc 18712341  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttc 309  Q
    ||||||||| || |||||||||| ||| || | ||| ||||||| |||| |||||||||    
T  18712340 atcatagtcgattccttcttgttgattgtatccttgtgcaactagtcttgccttgtttc 18712282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 309
Target Start/End: Original strand, 15326331 - 15326487
Alignment:
Q  153 cttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctcat 252  Q
    ||||| || ||||||||||||||||| |||  ||| || |   |||||||||| | |||||| || ||||| |  |||||||| ||||||||||| ||||    
T  15326331 ctttttacgtccatttgaaaaagttttatgcatttatgagatgcatatgcaagaagaattcttatagcttccagtcttgctactggagcataagtttcat 15326430  T
Q  253 catagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttc 309  Q
    ||||||| || |||||||||| ||| || | ||| ||||||| |||| |||||||||    
T  15326431 catagtcgattccttcttgttgattgtatccttgtgcaactagtcttgccttgtttc 15326487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 153 - 280
Target Start/End: Complemental strand, 5605007 - 5604880
Alignment:
Q  153 cttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctcat 252  Q
    |||||||||||||||||||||||||| || | ||| || |   |||||||||| | ||| | ||||||||| |||||||| || |||||| | || ||||    
T  5605007 cttttaacatccatttgaaaaagtttaatatttttatgagatgcatatgcaagaagaatacgaattgcttctaaccttgcaactggagcaaatgtttcat 5604908  T
Q  253 catagtcaataccttcttgttaattata 280  Q
    ||||||| |||||||| |||| ||||||    
T  5604907 catagtctataccttcctgttgattata 5604880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 21081406 - 21081465
Alignment:
Q  265 cttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttaccat 324  Q
    ||||||||| |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  21081406 cttcttgttgattataaccttgagcaactaatcttggcttgtttctgacaaccttaccat 21081465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 151 - 298
Target Start/End: Original strand, 22453391 - 22453538
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    |||||||||||||||||||||| ||||| || | |||||| |   |||||||||| | ||||   |||||||| |||||||| || |||| | | || ||    
T  22453391 cacttttaacatccatttgaaatagtttaatatttttgtgagatgcatatgcaagaagaatttgtattgcttctaaccttgccaccggagaaaatgtttc 22453490  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatct 298  Q
    ||||||||||||||||| ||||| |||||| | ||| || ||||||||    
T  22453491 atcatagtcaataccttgttgttgattatacccttgtgcgactaatct 22453538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 151 - 298
Target Start/End: Original strand, 24296131 - 24296277
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    |||||||||||||||||||||| ||||| |||| ||| || |   | |||||||| | ||| |  |||||||| ||||| ||||| |||||| | || ||    
T  24296131 cacttttaacatccatttgaaagagtttaatgt-tttatgagatgcgtatgcaagaagaatacgtattgcttctaacctggctaccggagcaaatgtttc 24296229  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatct 298  Q
    ||||||||||||||||||||||| ||| || | ||| |||||||||||    
T  24296230 atcatagtcaataccttcttgttgattgtagccttgtgcaactaatct 24296277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 151 - 312
Target Start/End: Complemental strand, 24417048 - 24416887
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||| | ||| || | ||| || |   |||||||||| | ||||||||||||||| ||||| ||||| |||||| | || ||    
T  24417048 cacttttgacatccatttgaaataatttaatatttttatgagatgcatatgcaagaagaattctaattgcttctaacctggctaccggagcaaaggtttc 24416949  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctga 312  Q
    ||| || |||||||||||||||| ||| || | |||||| || |||||  | ||||||||||    
T  24416948 atcgtaatcaataccttcttgttgattgtacccttgagctaccaatctagctttgtttctga 24416887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 151 - 312
Target Start/End: Original strand, 30450160 - 30450321
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||| | ||| || | ||| || |   |||||||||| | ||||||||||||||| ||||| ||||| |||||| | || ||    
T  30450160 cacttttgacatccatttgaaataatttaatatttttatgagatgcatatgcaagaagaattctaattgcttctaacctggctaccggagcaaaggtttc 30450259  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctga 312  Q
    ||| || |||||||||||||||| ||| || | |||||| || |||||  | ||||||||||    
T  30450260 atcgtaatcaataccttcttgttgattgtacccttgagctaccaatctagctttgtttctga 30450321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 151 - 307
Target Start/End: Original strand, 724040 - 724196
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| || |||||||||||||||||||||   || || |   |||||||||| | |||||| || ||||| |  || || ||||||||||| || ||    
T  724040 cactttttacgtccatttgaaaaagtttgatgcacttatgagatgcatatgcaagaagaattcttatggcttcaagtctagccacaggagcataggtttc 724139  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtt 307  Q
    ||| |||||||| |||||||||| ||| |||| |||||| || |||||  |||||||    
T  724140 atcgtagtcaatgccttcttgttgattgtaaccttgagctaccaatctggccttgtt 724196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 138
Target Start/End: Complemental strand, 24417257 - 24417151
Alignment:
Q  34 ttttctaaaaagagttgtgtcaataggtccacgagaaaaatcatttttgattaaaaatgtgctaagtctt--ataccaagatcaatgagcttgtttgaga 131  Q
    |||||||||||| ||||| |||||   ||| | ||||||||||||||||||||| ||||| || |  |||  |||||||| || | |||||||||| |||    
T  24417257 ttttctaaaaagggttgtatcaatttttcctctagaaaaatcatttttgattaagaatgtacttaacctttcataccaagctcgaggagcttgtttaaga 24417158  T
Q  132 ccatata 138  Q
    |||||||    
T  24417157 ccatata 24417151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 19381287 - 19381359
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttc 223  Q
    ||||||| |||||||||||||||| ||| |||  ||| |||||||||||||| || | |||||| || |||||    
T  19381287 cacttttcacatccatttgaaaaattttaatgcttttatgtgcaacatatgctagaagaattctgatggcttc 19381359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 147 - 319
Target Start/End: Complemental strand, 30750 - 30578
Alignment:
Q  147 aaaacacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataag 246  Q
    ||||||||||| |||||||||||||||||||| |||  ||| |||||| |||||||||| | ||||||||| ||||| |||||||| || || ||| | |    
T  30750 aaaacacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcatatgcaagaagaattctaatggcttctaaccttgcaactggtgcaaagg 30651  T
Q  247 tctcatcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaacctt 319  Q
    |||||||||||||||||| ||||||||  || || | |||||||||||| ||| | |||||||||||||||||    
T  30650 tctcatcatagtcaatacattcttgttggttgtagccttgagcaactaaccttgctttgtttctgacaacctt 30578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 147 - 319
Target Start/End: Original strand, 84062 - 84234
Alignment:
Q  147 aaaacacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataag 246  Q
    ||||||||||| |||||||||||||||||||| |||  ||| |||||| |||||||||| | ||||||||| ||||| |||||||| || || ||| | |    
T  84062 aaaacacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcatatgcaagaagaattctaatggcttctaaccttgcaactggtgcaaagg 84161  T
Q  247 tctcatcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaacctt 319  Q
    |||||||||||||||||| ||||||||  || || | |||||||||||| ||| | |||||||||||||||||    
T  84162 tctcatcatagtcaatacattcttgttggttgtagccttgagcaactaaccttgctttgtttctgacaacctt 84234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 280
Target Start/End: Complemental strand, 19346 - 19303
Alignment:
Q  237 ggagcataagtctcatcatagtcaataccttcttgttaattata 280  Q
    ||||||||||| |||||||||||||| |||||||||| ||||||    
T  19346 ggagcataagtttcatcatagtcaatcccttcttgttgattata 19303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0572 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 151 - 322
Target Start/End: Complemental strand, 242 - 71
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| ||   ||| |||||| |||| ||||| |  |||||||| ||||| ||||||||||| || ||| |||||||    
T  242 cacttttcacatccatttgaaaaagtttaatacttttatgtgcagcataagcaagaagtattctaatggcttctaaccttgctactggtgcaaaagtctc 143  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    ||||||||||||||||||||||| ||| |||| |||||| ||||  ||| | ||||||||||||||||||||    
T  142 atcatagtcaataccttcttgttgattgtaaccttgagctactagccttgctttgtttctgacaaccttacc 71  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 4e-35; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 151 - 322
Target Start/End: Original strand, 14887167 - 14887338
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||||||||| | |||||| || ||||| |||||||| || || ||| | |||||    
T  14887167 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcatatgcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctc 14887266  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || || | |||||||||||| ||| | ||||||||||||||||||||    
T  14887267 atcatagtcaataccttcttgttggttgtagccttgagcaactaaccttgctttgtttctgacaaccttacc 14887338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 151 - 322
Target Start/End: Original strand, 21208448 - 21208619
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||| ||||| | |||||| || ||||| |||||||| || || ||| | |||||    
T  21208448 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcataagcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctc 21208547  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || |||| |||||||||||| ||| | |||||||||||||| |||||    
T  21208548 atcatagtcaataccttcttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttacc 21208619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 151 - 298
Target Start/End: Original strand, 33597446 - 33597593
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    |||||||||||||||||||||| ||||| || | ||| || |   |||||||||| | |||||  |||||||| |||||||| || |||||| |||| ||    
T  33597446 cacttttaacatccatttgaaatagtttaatatttttatgagatgcatatgcaagaagaattcgtattgcttctaaccttgccaccggagcaaaagtttc 33597545  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatct 298  Q
    ||||||||||||||||||||||| |||||| | ||| || ||||||||    
T  33597546 atcatagtcaataccttcttgttgattatacccttgtgcgactaatct 33597593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 298
Target Start/End: Complemental strand, 18237156 - 18237009
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    |||||||||||||||||||||| ||||| |||| ||| || |   | |||||||| | ||| |  |||||||| ||||| ||||| |||||| | || ||    
T  18237156 cacttttaacatccatttgaaagagtttaatgtttttatgagatgcgtatgcaagaagaatacatattgcttctaacctggctaccggagcaaatgtttc 18237057  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatct 298  Q
    ||||||||||||||||||||||| ||| || | ||| |||||||||||    
T  18237056 atcatagtcaataccttcttgttgattgtagccttgtgcaactaatct 18237009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 298
Target Start/End: Complemental strand, 18246607 - 18246460
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    |||||||||||||||||||||| ||||| |||| ||| || |   | |||||||| | ||| |  |||||||| ||||| ||||| |||||| | || ||    
T  18246607 cacttttaacatccatttgaaagagtttaatgtttttatgagatgcgtatgcaagaagaatacatattgcttctaacctggctaccggagcaaatgtttc 18246508  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatct 298  Q
    ||||||||||||||||||||||| ||| || | ||| |||||||||||    
T  18246507 atcatagtcaataccttcttgttgattgtagccttgtgcaactaatct 18246460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 298
Target Start/End: Original strand, 25046929 - 25047076
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    |||||||||| ||||||||||||||||| |||| ||| || |   |||||||||| | ||| |  |||||||| ||||| ||||| |||||| | || ||    
T  25046929 cacttttaacgtccatttgaaaaagtttaatgtttttatgagatgcatatgcaagaagaatacgtattgcttctaacctggctaccggagcaaatgtttc 25047028  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatct 298  Q
    ||||||||||||||||||||||| ||| || | ||| || ||||||||    
T  25047029 atcatagtcaataccttcttgttgattgtagccttgtgcgactaatct 25047076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 151 - 309
Target Start/End: Original strand, 45494767 - 45494925
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| || ||||||||||||||||| |||  ||| || |   |||||||||| | |||||| || ||||| |  |||||||| ||||||||||| ||    
T  45494767 cactttttacgtccatttgaaaaagttttatgcatttatgagatgcatatgcaagaagaattcttatagcttccagtcttgctactggagcataagtttc 45494866  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttc 309  Q
    ||||||||| || |||||||||| ||| || | ||| ||||||| |||| |||||||||    
T  45494867 atcatagtcgattccttcttgttgattgtatccttgtgcaactagtcttgccttgtttc 45494925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 151 - 316
Target Start/End: Complemental strand, 12920043 - 12919878
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    |||||||||||||||||||||| ||||| || | ||| || |   |||||||||| | |||||  |||||||| ||||| || |  |||||| | || ||    
T  12920043 cacttttaacatccatttgaaagagtttaatatttttatgagatgcatatgcaagaagaattcgcattgcttctaacctggcaattggagcaaatgtttc 12919944  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaac 316  Q
    ||||||||||||||||||||||| |||||| | ||| || ||||||||  | || |||||||||||    
T  12919943 atcatagtcaataccttcttgttgattatagccttgtgctactaatctagctttatttctgacaac 12919878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 322
Target Start/End: Complemental strand, 22835601 - 22835429
Alignment:
Q  152 acttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctca 251  Q
    |||||| |||||||||||||| ||||| |||  ||| |||||| |||||||||| | |||||| || ||||| |||||||| || || ||| | ||||||    
T  22835601 acttttcacatccatttgaaagagtttaatgcttttatgtgcagcatatgcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctca 22835502  T
Q  252 tcatag--tcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    ||||||  |  |||| ||||||||  || || |  ||||||||||| ||| | ||||||||||||||||||||    
T  22835501 tcatagtttttatacattcttgttggttgtagccgtgagcaactaaccttgcattgtttctgacaaccttacc 22835429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 196 - 298
Target Start/End: Complemental strand, 20748794 - 20748692
Alignment:
Q  196 catatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctcatcatagtcaataccttcttgttaattataacattgagcaactaa 295  Q
    |||||||||| | ||||||||||||||| ||||| ||||| |||||| | || ||||| || |||||||||||||||| ||| || | |||||| || ||    
T  20748794 catatgcaagaagaattctaattgcttctaacctggctaccggagcaaaggtttcatcgtaatcaataccttcttgttgattgtacccttgagctaccaa 20748695  T
Q  296 tct 298  Q
    |||    
T  20748694 tct 20748692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 324
Target Start/End: Original strand, 23745876 - 23745909
Alignment:
Q  291 actaatcttaccttgtttctgacaaccttaccat 324  Q
    ||||||||| ||||||||||||||||||||||||    
T  23745876 actaatctttccttgtttctgacaaccttaccat 23745909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 4e-35; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 151 - 322
Target Start/End: Original strand, 5387393 - 5387564
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| ||||||||||| ||||| | |||||| || ||||| |||||||| || || ||| | |||||    
T  5387393 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcaacataagcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctc 5387492  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || |||| |||||||||||| ||| | |||||||||||||| |||||    
T  5387493 atcatagtcaataccttcttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttacc 5387564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 151 - 322
Target Start/End: Original strand, 16137662 - 16137833
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||| ||||| | |||||| || ||||| |||||||| || || ||| | |||||    
T  16137662 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcataagcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctc 16137761  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || |||| |||||||||||| ||| | ||||||||||||||||||||    
T  16137762 atcatagtcaataccttcttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaaccttacc 16137833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 151 - 322
Target Start/End: Complemental strand, 6539340 - 6539169
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||| ||||| | |||||| || ||||| |||||||| || || ||| | |||||    
T  6539340 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcataagcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctc 6539241  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || |||| |||||||||||| ||| | |||||||||||||| |||||    
T  6539240 atcatagtcaataccttcttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttacc 6539169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 151 - 322
Target Start/End: Complemental strand, 8505912 - 8505741
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||| ||||| | |||||| || ||||| |||||||| || || ||| | |||||    
T  8505912 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcataagcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctc 8505813  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || |||| |||||||||||| ||| | |||||||||||||| |||||    
T  8505812 atcatagtcaataccttcttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttacc 8505741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 151 - 322
Target Start/End: Original strand, 9540718 - 9540889
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||||||||| | |||||| || ||||| |||||||| || || ||| | |||||    
T  9540718 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcatcatatgcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctc 9540817  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || || | |||||||||||| ||| | |||||| |||||||||||||    
T  9540818 atcatagtcaataccttcttgttggttgtagccttgagcaactaaccttgctttgtttttgacaaccttacc 9540889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 151 - 322
Target Start/End: Original strand, 26353777 - 26353948
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||| ||||| | |||||| || ||||| |||||||| || || ||| | |||||    
T  26353777 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcataagcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctc 26353876  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || |||| |||||||||||| ||| | |||||||||||||| |||||    
T  26353877 atcatagtcaataccttcttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttacc 26353948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 151 - 322
Target Start/End: Complemental strand, 44902220 - 44902049
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||| ||||| | |||||| || ||||| |||||||| || || ||| | |||||    
T  44902220 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcataagcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctc 44902121  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || |||| |||||||||||| ||| | |||||||||||||| |||||    
T  44902120 atcatagtcaataccttcttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttacc 44902049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 151 - 322
Target Start/End: Complemental strand, 46501977 - 46501806
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||| ||||| | |||||| || ||||| |||||||| || || ||| | |||||    
T  46501977 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcataagcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctc 46501878  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || |||| |||||||||||| ||| | |||||||||||||| |||||    
T  46501877 atcatagtcaataccttcttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttacc 46501806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 151 - 322
Target Start/End: Complemental strand, 32103243 - 32103072
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| ||   ||| |||||| |||| ||||| | |||||| || ||||| |||||||| || || ||| | |||||    
T  32103243 cacttttcacatccatttgaaaaagtttaatacttttatgtgcagcataagcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctc 32103144  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || |||| |||||||||||| ||| | |||||||||||||| |||||    
T  32103143 atcatagtcaataccttcttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttacc 32103072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 151 - 321
Target Start/End: Complemental strand, 18663748 - 18663578
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| ||||||| ||||||||| | |||||| || || || |||||||| || || ||| |||||||    
T  18663748 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcaatatatgcaagaagaattctgatggcctctaaccttgcaactggtgcaaaagtctc 18663649  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttac 321  Q
    |||||||||||||||||| ||||  || || | ||||||||| || ||| | |||||||||||||||||||    
T  18663648 atcatagtcaataccttcctgttggttgtagccttgagcaaccaaccttgctttgtttctgacaaccttac 18663578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 151 - 316
Target Start/End: Original strand, 14640329 - 14640494
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    |||||||||||||||||||||| ||||| || | ||| || |   |||||||||| | ||| |  || ||||| ||||| || || |||||| |||| ||    
T  14640329 cacttttaacatccatttgaaagagtttaatatttttatgagatgcatatgcaagaagaatacgtatagcttctaacctggcaactggagcaaaagtttc 14640428  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaac 316  Q
    ||||||||||||||||||||||| ||| || | ||| || ||||||||  | || |||||||||||    
T  14640429 atcatagtcaataccttcttgttgattgtagccttgtgctactaatctagctttatttctgacaac 14640494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 151 - 312
Target Start/End: Complemental strand, 15179954 - 15179793
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||| | ||| || | ||| || |   |||||||||| | ||||||||||||||| ||||| ||||| |||||| | || ||    
T  15179954 cacttttgacatccatttgaaataatttaatatttttatgagatgcatatgcaagaagaattctaattgcttctaacctagctactggagcaaaggtttc 15179855  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctga 312  Q
    ||| || |||||||||||||||| ||| || | |||||| || |||||  | ||||||||||    
T  15179854 atcgtaatcaataccttcttgttgattgtacccttgagctaccaatctagctttgtttctga 15179793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 307
Target Start/End: Complemental strand, 611176 - 611020
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| || |||||||||||||||||||||   || || |   |||||||||| | |||||| || ||||| |  ||  | ||||||||||| || ||    
T  611176 cactttttacgtccatttgaaaaagtttgatgcacttatgagatgcatatgcaagaagaattcttatggcttcaagtctacccacaggagcataggtttc 611077  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtt 307  Q
    ||| |||||||| |||||||||| ||| |||| |||||| || |||||  |||||||    
T  611076 atcgtagtcaatgccttcttgttgattgtaaccttgagctaccaatctggccttgtt 611020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 4e-35; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 151 - 322
Target Start/End: Complemental strand, 16902809 - 16902638
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||| ||||| | |||||| || ||||| |||||||| || || ||| | |||||    
T  16902809 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcataagcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctc 16902710  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || |||| |||||||||||| ||| | ||||||||||||||||||||    
T  16902709 atcatagtcaataccttcttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaaccttacc 16902638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 151 - 322
Target Start/End: Original strand, 24927643 - 24927814
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||| || || | |||||| || ||||| |||||||| || || ||| | |||||    
T  24927643 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcataagccagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctc 24927742  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || |||| |||||||||||| ||| | ||||||||||||||||||||    
T  24927743 atcatagtcaataccttcttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaaccttacc 24927814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 151 - 322
Target Start/End: Complemental strand, 31361682 - 31361511
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||| ||||| | |||||| || ||||| |||||||| || || ||| | |||||    
T  31361682 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcataagcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctc 31361583  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || |||| |||||||||||| ||| | |||||||||||||| |||||    
T  31361582 atcatagtcaataccttcttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttacc 31361511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 298
Target Start/End: Original strand, 27746546 - 27746693
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |    ||| || |   |||||||||| |||||||| || ||||| || || || || ||||||||||| ||    
T  27746546 cacttttgacatccatttgaaaaagtttaaaacatttatgagatgcatatgcaagcaaaattcttatggcttccaatctagcaactggagcataagtttc 27746645  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatct 298  Q
    |||||| ||||| |||||||||| |||||| | ||| || ||||||||    
T  27746646 atcataatcaatcccttcttgttgattatatccttgtgccactaatct 27746693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 151 - 307
Target Start/End: Complemental strand, 8999290 - 8999134
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| || |||||||||||||||||||||   || || |   |||||||||| | |||||| || ||||| |  || || ||||||||||| || ||    
T  8999290 cactttttacgtccatttgaaaaagtttgatgcacttatgagatgcatatgcaagaagaattcttatggcttcaagtctagccacaggagcataggtttc 8999191  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtt 307  Q
    ||| |||||||| |||||||||| ||| |||| |||||| || |||||  |||||||    
T  8999190 atcgtagtcaatgccttcttgttgattgtaaccttgagctaccaatctggccttgtt 8999134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 4e-35; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 151 - 322
Target Start/End: Original strand, 27165458 - 27165629
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| ||   ||| |||||| |||| ||||| |  |||||||| ||||| ||||||||||| || ||| |||||||    
T  27165458 cacttttcacatccatttgaaaaagtttaatacttttatgtgcagcatacgcaagaagtattctaatggcttctaaccttgctactggtgcaaaagtctc 27165557  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    ||||||||||||||||||||||| ||| |||| |||||| ||||  ||| | ||||||||||||||||||||    
T  27165558 atcatagtcaataccttcttgttgattgtaaccttgagctactagccttgctttgtttctgacaaccttacc 27165629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 151 - 322
Target Start/End: Original strand, 9509242 - 9509413
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||| ||||| | |||||| || ||||| |||||||| || || ||| | |||||    
T  9509242 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcataagcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctc 9509341  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || |||| |||||||||||| ||| | |||||||||||||| |||||    
T  9509342 atcatagtcaataccttcttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttacc 9509413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 151 - 322
Target Start/End: Complemental strand, 18656081 - 18655910
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||| ||||| | |||||| || ||||| |||||||| || || ||| | |||||    
T  18656081 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcataagcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctc 18655982  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || |||| |||||||||||| ||| | |||||||||||||| |||||    
T  18655981 atcatagtcaataccttcttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttacc 18655910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 154 - 322
Target Start/End: Complemental strand, 45019210 - 45019042
Alignment:
Q  154 ttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctcatc 253  Q
    |||| |||||||||||||||||||| |||  ||| |||||| |||||||||| | |||||| || ||||| |||||||| || || ||| | ||||||||    
T  45019210 ttttcacatccatttgaaaaagtttaatgcttttatgtgcagcatatgcaagaataattctgatggcttctaaccttgcaactggtgcaaaggtctcatc 45019111  T
Q  254 atagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    ||| ||||||||||||||||  || || | |||||||||||| ||| | ||||||||||||||||||||    
T  45019110 ataatcaataccttcttgttggttgtagccttgagcaactaaccttgctttgtttctgacaaccttacc 45019042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 322
Target Start/End: Complemental strand, 22907008 - 22906837
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| ||||||||||||||||| |  ||||| || |||||  |||||||||| || ||| | |||||    
T  22907008 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcaacatatgcaagaagtattctgatagcttctcaccttgctactggtgcaaatgtctc 22906909  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || || | |||||| ||||  |||   |||||||||| |||||||||    
T  22906908 atcatagtcaataccttcttgttggttgtagccttgagccactagccttgttttgtttctgaaaaccttacc 22906837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 151 - 310
Target Start/End: Complemental strand, 22103376 - 22103218
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||| ||||||||| |||| ||| |||||| ||||| |||| | ||||||||||||||| ||||||||||| || ||| | |||||    
T  22103376 cactttttacatccatttaaaaaagtttaatgtttttatgtgcatcatat-caaggagaattctaattgcttctaaccttgctactggtgcaaaggtctc 22103278  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttct 310  Q
     ||| ||| ||||| ||| ||||  || || | ||||||||| |||||| ||||||||||    
T  22103277 ttcaaagttaatacattcgtgttggttgtacccttgagcaaccaatcttgccttgtttct 22103218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 153 - 280
Target Start/End: Complemental strand, 1795392 - 1795265
Alignment:
Q  153 cttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctcat 252  Q
    |||||||||||||||||||||||||| || | ||| || |   |||||||||| | ||| | ||||||||| |||||||| || |||||| | || ||||    
T  1795392 cttttaacatccatttgaaaaagtttaatatttttatgagatgcatatgcaagaagaatacgaattgcttctaaccttgcaactggagcaaatgtttcat 1795293  T
Q  253 catagtcaataccttcttgttaattata 280  Q
    ||||||| |||||||| |||| ||||||    
T  1795292 catagtctataccttcctgttgattata 1795265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 159 - 321
Target Start/End: Original strand, 33387 - 33549
Alignment:
Q  159 acatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctcatcatagt 258  Q
    |||||||||||||||||||| |||  ||| |||||| |||||||||| | |||||| || ||||| |||||||| || || ||| | |||||||||||||    
T  33387 acatccatttgaaaaagtttaatgcttttatgtgcagcatatgcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctcatcatagt 33486  T
Q  259 caataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttac 321  Q
    |||||||||||||||  || |||| |||||||||||| ||| | |||||||||||||||||||    
T  33487 caataccttcttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaaccttac 33549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 151 - 322
Target Start/End: Original strand, 13456 - 13627
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||| ||||| | |||||| || ||||| |||||||| || || ||| | |||||    
T  13456 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcataagcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctc 13555  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || |||| |||||||||||| ||| | |||||||||||||| |||||    
T  13556 atcatagtcaataccttcttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttacc 13627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 151 - 322
Target Start/End: Complemental strand, 6697081 - 6696910
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||| ||||| | |||||| || ||||| |||||||| || || ||| | |||||    
T  6697081 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcataagcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctc 6696982  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || |||| |||||||||||| ||| | |||||||||||||| |||||    
T  6696981 atcatagtcaataccttcttgttggttgtaaccttgagcaactaaccttgctttgtttctgacaactttacc 6696910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 159 - 321
Target Start/End: Complemental strand, 16269911 - 16269749
Alignment:
Q  159 acatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctcatcatagt 258  Q
    |||||||||||||||||||| |||  ||| |||||| |||||||||| | |||||| || ||||| |||||||| || || ||| | |||||||||||||    
T  16269911 acatccatttgaaaaagtttaatgcttttatgtgcagcatatgcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctcatcatagt 16269812  T
Q  259 caataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttac 321  Q
    |||||||||||||||  || || | |||||||||||| ||| | |||||||||||||||||||    
T  16269811 caataccttcttgttggttgtagccttgagcaactaaccttgctttgtttctgacaaccttac 16269749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 322
Target Start/End: Complemental strand, 17156279 - 17156108
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| ||||||||||||||||||||  ||  ||| |||||| ||||||  || | |||| | || ||||| |||||||| || || ||| | |||||    
T  17156279 cacttttcacatccatttgaaaaagtttactgcttttatgtgcagcatatggtagaagaattttgatggcttctaaccttgcaactggtgcaaaggtctc 17156180  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    || | | ||||||||||||||||  || || | |||||||||||| ||| | ||||||||||||||||||||    
T  17156179 ataaaaatcaataccttcttgttggttgtagccttgagcaactaaccttgctttgtttctgacaaccttacc 17156108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 151 - 309
Target Start/End: Complemental strand, 14936745 - 14936587
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| || ||||||||||||||||| |||  ||| || |   |||||||||| | |||||| || ||||| |  |||||||| ||||||||||| ||    
T  14936745 cactttttacgtccatttgaaaaagttttatgcatttatgagatgcatatgcaagaagaattcttatagcttccagtcttgctactggagcataagtttc 14936646  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttc 309  Q
    ||||||||| || |||||||||| ||| || | ||| ||||||| |||| |||||||||    
T  14936645 atcatagtcgattccttcttgttgattgtatccttgtgcaactagtcttgccttgtttc 14936587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 151 - 312
Target Start/End: Complemental strand, 26816709 - 26816548
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||| | ||| || | ||| || |   |||||||||| | ||||||||||||||| ||||| ||||| |||||| | || ||    
T  26816709 cacttttgacatccatttgaaataatttaatatttttatgagatgcatatgcaagaagaattctaattgcttctaacctggctaccggagcaaaggtttc 26816610  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctga 312  Q
    ||| || |||||||||||||||| ||| || | |||||| || |||||  | ||||||||||    
T  26816609 atcgtaatcaataccttcttgttgattgtacccttgagctaccaatctagctttgtttctga 26816548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 151 - 312
Target Start/End: Original strand, 54695344 - 54695505
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||| | ||| || | ||| || |   |||||||||| | ||||||||||||||| ||||| ||||| |||||| | || ||    
T  54695344 cacttttgacatccatttgaaataatttaatatttttatgagatgcatatgcaagaagaattctaattgcttctaacctggctaccggagcaaaggtttc 54695443  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctga 312  Q
    ||| || |||||||||||||||| ||| || | |||||| || |||||  | ||||||||||    
T  54695444 atcgtaatcaataccttcttgttgattgtacccttgagctaccaatctagctttgtttctga 54695505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 151 - 307
Target Start/End: Complemental strand, 116593 - 116437
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| || |||||||||||||||||||||   || || |   |||||||||| | |||||| || ||||| |  || || ||||||||||| || ||    
T  116593 cactttttacgtccatttgaaaaagtttgatgcacttatgagatgcatatgcaagaagaattcttatggcttcaagtctagccacaggagcataggtttc 116494  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtt 307  Q
    ||| |||||||| |||||||||| ||| |||| |||||| || |||||  |||||||    
T  116493 atcgtagtcaatgccttcttgttgattgtaaccttgagctaccaatctggccttgtt 116437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 138
Target Start/End: Original strand, 54695134 - 54695241
Alignment:
Q  33 tttttctaaaaagagttgtgtcaataggtccacgagaaaaatcatttttgattaaaaatgtgctaagtctt--ataccaagatcaatgagcttgtttgag 130  Q
    ||||||||||||| ||||| |||||   ||| | ||||||||||||||||||||| ||||| || |  |||  |||||||| || | |||||||||| ||    
T  54695134 tttttctaaaaagggttgtatcaatttttcctctagaaaaatcatttttgattaagaatgtacttaacctttcataccaagctcgaggagcttgtttaag 54695233  T
Q  131 accatata 138  Q
    ||||||||    
T  54695234 accatata 54695241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 138
Target Start/End: Complemental strand, 26816906 - 26816800
Alignment:
Q  34 ttttctaaaaagagttgtgtcaataggtccacgagaaaaatcatttttgattaaaaatgtgctaagtctt--ataccaagatcaatgagcttgtttgaga 131  Q
    |||||||||||| ||||| |||||   ||| | ||||||||||||||||||||| || ||||| |  |||  |||||||| || | |||||||||| |||    
T  26816906 ttttctaaaaagggttgtatcaatttttcctctagaaaaatcatttttgattaagaacgtgcttaacctttcataccaagctcgaggagcttgtttaaga 26816807  T
Q  132 ccatata 138  Q
    |||||||    
T  26816806 ccatata 26816800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 138
Target Start/End: Complemental strand, 17156454 - 17156382
Alignment:
Q  68 gaaaaatcatttttgattaaaaatgtgctaagtc--ttataccaagatcaatgagcttgtttgagaccatata 138  Q
    |||||| ||||||  |||||||||||||||||||  | ||||| || || | |||||||||||||||||||||    
T  17156454 gaaaaaccattttcaattaaaaatgtgctaagtctatcataccgagctctaggagcttgtttgagaccatata 17156382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0611 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 154 - 320
Target Start/End: Complemental strand, 2806 - 2640
Alignment:
Q  154 ttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctcatc 253  Q
    |||| |||||||||||||||||||| |||  ||| |||||| |||||||||| | |||||| || ||||| |||||||| || || ||| | ||||||||    
T  2806 ttttcacatccatttgaaaaagtttaatgcttttatgtgcatcatatgcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctcatc 2707  T
Q  254 atagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaacctta 320  Q
    ||||||||||||||||||||  || || | |||||||||||| ||| | ||||||||||||||||||    
T  2706 atagtcaataccttcttgttggttgtagccttgagcaactaaccttgctttgtttctgacaacctta 2640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0764 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0764
Description:

Target: scaffold0764; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 151 - 322
Target Start/End: Original strand, 6357 - 6528
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||| ||||| |  ||||| || ||||| ||||||||||| || ||| |||||||    
T  6357 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcataagcaagaagtattctgatagcttctaaccttgctactggtgcaaaagtctc 6456  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || || | |||||| ||||  ||| | ||||||||||||||||||||    
T  6457 atcatagtcaataccttcttgttggttgtagccttgagctactagccttgctttgtttctgacaaccttacc 6528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0313
Description:

Target: scaffold0313; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 151 - 322
Target Start/End: Complemental strand, 263 - 92
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||| ||||| |  ||||| || ||||| ||||||||||| || ||| |||||||    
T  263 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcataagcaagaagtattctgatagcttctaaccttgctactggtgcaaaagtctc 164  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || || | |||||| ||||  ||| | ||||||||||||||||||||    
T  163 atcatagtcaataccttcttgttggttgtagccttgagctactagccttgctttgtttctgacaaccttacc 92  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 151 - 322
Target Start/End: Complemental strand, 14420 - 14249
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||| ||||| |  ||||| || ||||| ||||||||||| || ||| |||||||    
T  14420 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcataagcaagaagtattctgatagcttctaaccttgctactggtgcaaaagtctc 14321  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || || | |||||| ||||  ||| | ||||||||||||||||||||    
T  14320 atcatagtcaataccttcttgttggttgtagccttgagctactagccttgctttgtttctgacaaccttacc 14249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 151 - 316
Target Start/End: Original strand, 45902 - 46067
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| |||||| |||| ||||| | |||||| || ||||| |||||||| || || ||| | |||||    
T  45902 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcagcataagcaagaagaattctgatggcttctaaccttgcaactggtgcaaaggtctc 46001  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaac 316  Q
    |||||||||||||||||||||||  || |||| |||||||||||| ||| | || |||||||||||    
T  46002 atcatagtcaataccttcttgttggttgtaaccttgagcaactaaccttgctttatttctgacaac 46067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 322
Target Start/End: Complemental strand, 153435 - 153264
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||||||| |||  ||| ||||||||||||||||  |  ||||| || ||||| ||||||||||| || ||| | |||||    
T  153435 cacttttcacatccatttgaaaaagtttaatgcttttatgtgcaacatatgcaaaaagtattctgatagcttctaaccttgctactggtgcaaatgtctc 153336  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||||||||||||||||||||  || || | |||||| ||||  |||   |||||||||| |||||||||    
T  153335 atcatagtcaataccttcttgttggttgtagccttgagccactagccttgttttgtttctgataaccttacc 153264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 151 - 322
Target Start/End: Original strand, 32384 - 32555
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||||| ||| |||  ||| |||||| |||||| ||| | |||||| || ||||| |||||||| || || | | |||||||    
T  32384 cacttttgacatccatttgaaaaattttaatgcttttttgtgcagcatatgaaagaagaattctgatggcttctaaccttgcaactggtgaaaaagtctc 32483  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctgacaaccttacc 322  Q
    |||||| ||| ||||||||||||  || || | |||||||||||| ||| | ||  ||||||||||||||||    
T  32484 atcataatcagtaccttcttgttggttgtagccttgagcaactaaccttgcttttcttctgacaaccttacc 32555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 298
Target Start/End: Complemental strand, 261298 - 261151
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    |||||||||||||||||||||| ||||| |||| ||| || |   | |||||||| | ||| |  |||||||| ||||| ||||| |||||| | || ||    
T  261298 cacttttaacatccatttgaaagagtttaatgtttttatgagatgcgtatgcaagaagaatacatattgcttctaacctggctaccggagcaaatgtttc 261199  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatct 298  Q
    ||||||||||||||||||||||| ||| || | ||| |||||||||||    
T  261198 atcatagtcaataccttcttgttgattgtagccttgtgcaactaatct 261151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 298
Target Start/End: Complemental strand, 263601 - 263454
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    |||||||||||||||||||||| ||||| |||| ||| || |   |||||||||| | ||| |  |||||||| ||||| || || |||||| | || ||    
T  263601 cacttttaacatccatttgaaagagtttaatgtttttatgagatgcatatgcaagaagaatacgtattgcttctaacctggccaccggagcaaatgtttc 263502  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatct 298  Q
    ||||||||||||||||||||||| ||| || | ||| |||||||||||    
T  263501 atcatagtcaataccttcttgttgattgtagccttgtgcaactaatct 263454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 151 - 312
Target Start/End: Complemental strand, 7112 - 6951
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||| | ||| || | ||| || |   |||||||||| | ||||||||||||||| ||||| ||||| |||||| | || ||    
T  7112 cacttttgacatccatttgaaataatttaatatttttatgggatgcatatgcaagaagaattctaattgcttctaacctggctaccggagcaaaggtttc 7013  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctga 312  Q
    ||| || |||||||||||||||| ||| || | |||||| || |||||  | ||||||||||    
T  7012 atcgtaatcaataccttcttgttgattgtacccttgagctaccaatctagctttgtttctga 6951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 151 - 312
Target Start/End: Original strand, 99858 - 100019
Alignment:
Q  151 cacttttaacatccatttgaaaaagtttgatgtgtttgtgtgcaacatatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctc 250  Q
    ||||||| |||||||||||||| | ||| || | ||| || |   |||||||||| | ||||||||||||||| ||||| ||||| |||||| | || ||    
T  99858 cacttttgacatccatttgaaataatttaatatttttatgagatgcatatgcaagaagaattctaattgcttctaacctggctaccggagcaaaggtttc 99957  T
Q  251 atcatagtcaataccttcttgttaattataacattgagcaactaatcttaccttgtttctga 312  Q
    ||| || |||||||||||||||| ||| || | |||||| || |||||  | ||||||||||    
T  99958 atcgtaatcaataccttcttgttgattgtacccttgagctaccaatctagctttgtttctga 100019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 138
Target Start/End: Original strand, 99649 - 99755
Alignment:
Q  34 ttttctaaaaagagttgtgtcaataggtccacgagaaaaatcatttttgattaaaaatgtgctaagtctt--ataccaagatcaatgagcttgtttgaga 131  Q
    |||||||||||| ||||| |||||   ||| | ||||||||||||||||||||| || ||||| |  |||  |||||||| || | |||||||||| |||    
T  99649 ttttctaaaaagggttgtatcaatttttcctctagaaaaatcatttttgattaagaacgtgcttaacctttcataccaagctcgaggagcttgtttaaga 99748  T
Q  132 ccatata 138  Q
    |||||||    
T  99749 ccatata 99755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 280
Target Start/End: Complemental strand, 167676 - 167592
Alignment:
Q  196 catatgcaagtaaaattctaattgcttcgaaccttgctacaggagcataagtctcatcatagtcaataccttcttgttaattata 280  Q
    ||||||||||||| ||||| || || || || || || || ||||||||||| ||||| || ||||| |||||||||| ||||||    
T  167676 catatgcaagtaacattcttatggcctccaatctagcaactggagcataagtttcatcgtaatcaatcccttcttgttgattata 167592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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