View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18842_high_10 (Length: 258)

Name: NF18842_high_10
Description: NF18842
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18842_high_10
NF18842_high_10
[»] chr2 (38 HSPs)
chr2 (11-258)||(9313031-9313290)
chr2 (67-200)||(42813732-42813864)
chr2 (63-203)||(45257415-45257554)
chr2 (63-155)||(15085744-15085836)
chr2 (93-203)||(22356140-22356251)
chr2 (63-150)||(35325377-35325463)
chr2 (63-184)||(31061467-31061588)
chr2 (63-143)||(3094410-3094489)
chr2 (70-154)||(42296349-42296432)
chr2 (63-154)||(36052133-36052223)
chr2 (63-142)||(45098277-45098355)
chr2 (96-202)||(16713665-16713771)
chr2 (84-138)||(34187705-34187759)
chr2 (63-164)||(21502141-21502241)
chr2 (64-197)||(31795772-31795904)
chr2 (63-143)||(1052812-1052891)
chr2 (63-143)||(33265714-33265793)
chr2 (63-148)||(8554351-8554435)
chr2 (104-200)||(35736335-35736431)
chr2 (117-200)||(23748256-23748339)
chr2 (208-258)||(9288681-9288731)
chr2 (127-200)||(9631731-9631804)
chr2 (110-199)||(36046205-36046294)
chr2 (63-123)||(31928121-31928180)
chr2 (128-204)||(35736171-35736247)
chr2 (110-164)||(14196823-14196877)
chr2 (128-202)||(36347713-36347787)
chr2 (112-181)||(887266-887335)
chr2 (63-127)||(2381060-2381123)
chr2 (131-203)||(42296478-42296550)
chr2 (111-184)||(886934-887005)
chr2 (130-200)||(15224868-15224938)
chr2 (110-187)||(8426892-8426969)
chr2 (127-200)||(17380012-17380085)
chr2 (123-176)||(36566874-36566927)
chr2 (111-188)||(40022528-40022605)
chr2 (100-152)||(887158-887210)
chr2 (200-232)||(9288645-9288677)
[»] chr8 (32 HSPs)
chr8 (63-202)||(8815139-8815277)
chr8 (63-202)||(43732795-43732933)
chr8 (63-202)||(12022140-12022279)
chr8 (63-197)||(16024262-16024394)
chr8 (63-202)||(34196417-34196553)
chr8 (63-200)||(30365238-30365374)
chr8 (63-153)||(8671839-8671930)
chr8 (67-152)||(29937614-29937698)
chr8 (63-158)||(20472734-20472828)
chr8 (63-203)||(40632993-40633125)
chr8 (63-180)||(6453292-6453408)
chr8 (63-164)||(9933349-9933449)
chr8 (63-164)||(39449412-39449512)
chr8 (128-204)||(31543244-31543320)
chr8 (118-202)||(31738585-31738669)
chr8 (63-124)||(43826440-43826500)
chr8 (63-138)||(9434360-9434435)
chr8 (118-202)||(11785688-11785772)
chr8 (111-200)||(12022298-12022387)
chr8 (112-181)||(16653105-16653174)
chr8 (128-184)||(1281159-1281215)
chr8 (112-188)||(31543084-31543160)
chr8 (125-188)||(36309012-36309075)
chr8 (64-200)||(41103504-41103641)
chr8 (64-154)||(24243095-24243182)
chr8 (127-203)||(3726860-3726936)
chr8 (128-176)||(30581985-30582033)
chr8 (111-198)||(16024155-16024242)
chr8 (133-203)||(7503131-7503201)
chr8 (95-153)||(13405120-13405177)
chr8 (111-200)||(8815296-8815385)
chr8 (128-184)||(10028126-10028182)
[»] chr7 (41 HSPs)
chr7 (63-202)||(33519156-33519294)
chr7 (63-202)||(36267551-36267689)
chr7 (63-202)||(48881556-48881694)
chr7 (63-200)||(28074103-28074239)
chr7 (63-184)||(35422072-35422192)
chr7 (63-188)||(37620882-37621006)
chr7 (71-188)||(48015323-48015439)
chr7 (63-164)||(21857455-21857554)
chr7 (64-200)||(30592253-30592388)
chr7 (63-143)||(39646577-39646656)
chr7 (63-175)||(31364070-31364178)
chr7 (63-154)||(2087785-2087879)
chr7 (63-179)||(37925949-37926064)
chr7 (65-188)||(3215874-3215994)
chr7 (74-164)||(48013622-48013711)
chr7 (63-204)||(16833803-16833946)
chr7 (64-202)||(40196530-40196667)
chr7 (64-159)||(23116300-23116395)
chr7 (128-200)||(39856037-39856109)
chr7 (117-188)||(4833543-4833614)
chr7 (106-188)||(33519060-33519142)
chr7 (133-203)||(33655285-33655355)
chr7 (64-202)||(41496955-41497092)
chr7 (111-200)||(13771101-13771190)
chr7 (64-200)||(18231695-18231830)
chr7 (111-199)||(31571625-31571713)
chr7 (63-143)||(3143588-3143671)
chr7 (71-130)||(8122264-8122322)
chr7 (64-159)||(33655149-33655243)
chr7 (118-204)||(13770944-13771030)
chr7 (119-205)||(47391019-47391105)
chr7 (131-200)||(1051673-1051742)
chr7 (63-108)||(12670928-12670972)
chr7 (111-200)||(37925841-37925930)
chr7 (110-197)||(42306484-42306571)
chr7 (133-203)||(47390852-47390922)
chr7 (67-153)||(48094005-48094090)
chr7 (100-206)||(12670526-12670633)
chr7 (110-203)||(31553182-31553272)
chr7 (127-183)||(1051517-1051573)
chr7 (132-200)||(36267729-36267797)
[»] chr3 (31 HSPs)
chr3 (63-200)||(34641100-34641234)
chr3 (63-203)||(24253830-24253969)
chr3 (63-155)||(18086025-18086117)
chr3 (63-187)||(26135905-26136028)
chr3 (63-164)||(40858673-40858773)
chr3 (68-184)||(55428492-55428607)
chr3 (63-200)||(8432261-8432395)
chr3 (63-138)||(42772140-42772214)
chr3 (63-163)||(54985730-54985836)
chr3 (63-143)||(41414186-41414265)
chr3 (63-149)||(48683720-48683806)
chr3 (63-188)||(10943626-10943750)
chr3 (63-203)||(44412469-44412608)
chr3 (63-153)||(17474253-17474342)
chr3 (63-144)||(42699668-42699748)
chr3 (63-142)||(21090129-21090207)
chr3 (63-142)||(36727284-36727362)
chr3 (118-203)||(41110318-41110403)
chr3 (64-202)||(24560326-24560463)
chr3 (118-203)||(18654597-18654682)
chr3 (128-204)||(28582681-28582757)
chr3 (63-123)||(46978535-46978594)
chr3 (62-115)||(27197734-27197786)
chr3 (128-204)||(220569-220645)
chr3 (118-198)||(23028088-23028168)
chr3 (64-143)||(45663203-45663279)
chr3 (132-181)||(6803377-6803426)
chr3 (111-184)||(14898135-14898208)
chr3 (128-185)||(30200263-30200320)
chr3 (63-159)||(16884014-16884107)
chr3 (128-200)||(24560217-24560289)
[»] chr1 (35 HSPs)
chr1 (67-188)||(35512909-35513029)
chr1 (63-200)||(1085489-1085626)
chr1 (63-188)||(25268372-25268496)
chr1 (63-200)||(51303384-51303520)
chr1 (63-151)||(47071159-47071246)
chr1 (63-202)||(40709290-40709428)
chr1 (69-153)||(13386966-13387049)
chr1 (63-200)||(20607327-20607461)
chr1 (63-198)||(2506647-2506781)
chr1 (63-153)||(35927921-35928009)
chr1 (63-153)||(525148-525235)
chr1 (84-149)||(1344676-1344741)
chr1 (63-148)||(33643376-33643460)
chr1 (117-202)||(40094931-40095016)
chr1 (110-203)||(12234164-12234257)
chr1 (103-203)||(38509891-38509991)
chr1 (110-200)||(30010486-30010576)
chr1 (111-204)||(2470726-2470819)
chr1 (64-204)||(41498513-41498653)
chr1 (128-200)||(12234010-12234082)
chr1 (128-204)||(35349634-35349710)
chr1 (63-143)||(40287313-40287391)
chr1 (110-197)||(7444649-7444736)
chr1 (133-200)||(41498404-41498471)
chr1 (111-166)||(41676436-41676491)
chr1 (128-202)||(30010330-30010404)
chr1 (131-204)||(1085665-1085738)
chr1 (132-201)||(2858931-2859000)
chr1 (111-203)||(10392028-10392115)
chr1 (128-203)||(32951490-32951565)
chr1 (63-154)||(52707753-52707843)
chr1 (127-200)||(35349466-35349537)
chr1 (128-181)||(2859104-2859157)
chr1 (127-159)||(1738112-1738144)
chr1 (128-184)||(10391888-10391944)
[»] chr4 (47 HSPs)
chr4 (63-198)||(54576329-54576463)
chr4 (72-200)||(5825013-5825140)
chr4 (63-202)||(37761572-37761710)
chr4 (63-151)||(22186827-22186914)
chr4 (63-164)||(43961518-43961618)
chr4 (63-197)||(4437428-4437561)
chr4 (64-185)||(21694905-21695024)
chr4 (63-159)||(55080687-55080782)
chr4 (63-164)||(7977531-7977632)
chr4 (63-183)||(29993788-29993907)
chr4 (63-202)||(34995159-34995295)
chr4 (63-155)||(54001151-54001239)
chr4 (63-188)||(51329903-51330026)
chr4 (63-153)||(11089624-11089713)
chr4 (63-153)||(47846102-47846191)
chr4 (63-153)||(17182530-17182621)
chr4 (118-203)||(37711285-37711370)
chr4 (117-202)||(54935230-54935315)
chr4 (110-198)||(27735899-27735987)
chr4 (66-164)||(44145842-44145939)
chr4 (63-139)||(14539380-14539455)
chr4 (110-200)||(6938401-6938491)
chr4 (128-202)||(45132667-45132741)
chr4 (118-203)||(5730827-5730912)
chr4 (67-136)||(9030328-9030396)
chr4 (127-200)||(49735468-49735541)
chr4 (64-188)||(17938119-17938242)
chr4 (64-200)||(45741999-45742134)
chr4 (65-188)||(55510280-55510400)
chr4 (110-200)||(24565346-24565436)
chr4 (110-203)||(31348313-31348411)
chr4 (96-154)||(35543353-35543411)
chr4 (110-200)||(41174499-41174589)
chr4 (73-127)||(51075215-51075268)
chr4 (111-184)||(27735761-27735834)
chr4 (112-164)||(23813137-23813189)
chr4 (128-200)||(31348493-31348565)
chr4 (134-202)||(46007879-46007947)
chr4 (117-204)||(47694345-47694433)
chr4 (110-202)||(54320588-54320680)
chr4 (128-179)||(6938302-6938353)
chr4 (131-200)||(54935067-54935137)
chr4 (111-200)||(56135749-56135838)
chr4 (63-114)||(56135857-56135904)
chr4 (128-200)||(1968531-1968603)
chr4 (117-149)||(2247854-2247886)
chr4 (64-180)||(6891469-6891584)
[»] chr5 (36 HSPs)
chr5 (63-202)||(34980918-34981056)
chr5 (63-203)||(33744190-33744329)
chr5 (63-202)||(40305668-40305801)
chr5 (63-202)||(10204684-10204822)
chr5 (85-203)||(2183943-2184061)
chr5 (67-202)||(15986622-15986756)
chr5 (63-164)||(10043360-10043460)
chr5 (69-153)||(6597837-6597920)
chr5 (110-198)||(1657967-1658055)
chr5 (63-154)||(6382435-6382525)
chr5 (63-197)||(21581055-21581188)
chr5 (67-200)||(12035936-12036067)
chr5 (106-200)||(14245088-14245182)
chr5 (106-188)||(36363182-36363264)
chr5 (67-140)||(8551478-8551550)
chr5 (110-199)||(13634865-13634954)
chr5 (67-154)||(10043055-10043141)
chr5 (111-201)||(14684639-14684729)
chr5 (110-203)||(7544290-7544383)
chr5 (64-203)||(11437048-11437189)
chr5 (128-200)||(13634711-13634783)
chr5 (128-200)||(26414893-26414965)
chr5 (127-202)||(14245217-14245292)
chr5 (122-184)||(11436955-11437017)
chr5 (64-153)||(28279523-28279611)
chr5 (128-200)||(7544136-7544208)
chr5 (132-200)||(10204576-10204644)
chr5 (131-203)||(10476203-10476275)
chr5 (112-208)||(11419184-11419280)
chr5 (127-197)||(11757074-11757144)
chr5 (128-202)||(16938477-16938551)
chr5 (110-200)||(16938633-16938723)
chr5 (128-204)||(4373738-4373814)
chr5 (63-115)||(5688521-5688572)
chr5 (136-184)||(10476042-10476090)
chr5 (133-173)||(28279654-28279694)
[»] scaffold0026 (2 HSPs)
scaffold0026 (67-161)||(1436-1529)
scaffold0026 (128-197)||(1175-1244)
[»] scaffold0007 (1 HSPs)
scaffold0007 (63-201)||(242324-242461)
[»] scaffold0012 (1 HSPs)
scaffold0012 (63-188)||(184715-184839)
[»] chr6 (31 HSPs)
chr6 (63-184)||(34176587-34176707)
chr6 (74-202)||(9051532-9051659)
chr6 (63-193)||(10293356-10293485)
chr6 (63-197)||(26318413-26318546)
chr6 (63-153)||(31799029-31799118)
chr6 (63-200)||(3841193-3841330)
chr6 (66-200)||(4097235-4097368)
chr6 (63-137)||(15353471-15353544)
chr6 (63-180)||(25468420-25468535)
chr6 (69-137)||(15323339-15323406)
chr6 (63-131)||(15373668-15373735)
chr6 (119-194)||(23091121-23091197)
chr6 (64-199)||(10818325-10818459)
chr6 (106-203)||(15353361-15353458)
chr6 (101-188)||(19278046-19278133)
chr6 (118-203)||(15323222-15323307)
chr6 (110-200)||(9721138-9721228)
chr6 (133-202)||(12811157-12811226)
chr6 (128-200)||(14515473-14515545)
chr6 (93-149)||(28477126-28477182)
chr6 (93-149)||(29693023-29693079)
chr6 (133-205)||(30487301-30487373)
chr6 (110-197)||(9719034-9719121)
chr6 (121-200)||(10818229-10818308)
chr6 (118-203)||(1390481-1390566)
chr6 (121-202)||(4097678-4097759)
chr6 (111-164)||(9298641-9298694)
chr6 (103-164)||(31849257-31849318)
chr6 (118-202)||(14515633-14515717)
chr6 (111-199)||(16737997-16738085)
chr6 (118-206)||(34176497-34176584)
[»] scaffold0240 (1 HSPs)
scaffold0240 (62-200)||(17647-17782)
[»] scaffold0071 (1 HSPs)
scaffold0071 (63-152)||(52993-53081)
[»] scaffold0067 (2 HSPs)
scaffold0067 (66-203)||(39183-39320)
scaffold0067 (128-200)||(39362-39434)
[»] scaffold0095 (1 HSPs)
scaffold0095 (63-164)||(8255-8355)
[»] scaffold0119 (1 HSPs)
scaffold0119 (63-150)||(37491-37577)
[»] scaffold0171 (2 HSPs)
scaffold0171 (110-192)||(16104-16186)
scaffold0171 (111-184)||(15966-16039)
[»] scaffold1414 (1 HSPs)
scaffold1414 (63-127)||(409-473)
[»] scaffold0198 (1 HSPs)
scaffold0198 (112-197)||(3150-3235)


Alignment Details
Target: chr2 (Bit Score: 170; Significance: 2e-91; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 11 - 258
Target Start/End: Original strand, 9313031 - 9313290
Alignment:
Q  11 atcatcaaaacgttttctaccattgaacaatgtaaaaaataataattaaaaatt---------tgaagtattatatgatc-at--tttatcaagttgtta 98  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||         |||||||| |||||||| ||  |||||||||||||||    
T  9313031 atcatcaaaatgttttctaccattgaacaatgtaaaaaa-aataattaaaaattaagtgtttttgaagtataatatgatcgatcatttatcaagttgtta 9313129  T
Q  99 attcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccc-tctcctctcatcccctcctaaaccctccatcgaaaaacac 197  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  9313130 attcaattttcgaaaaatcattttataatgtctgtaatttaaaaaggaaaagtaagcccctctcctctcatcccctcctaaaccctccatcgaagaacac 9313229  T
Q  198 cctaaattatagtccaattttcgttacttataaacagcaaagcacaacgttgaaactgcac 258  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9313230 cctaaattgtagtccaattttcgttacttataaacagcaaagcacaacgttgaaactgcac 9313290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 67 - 200
Target Start/End: Original strand, 42813732 - 42813864
Alignment:
Q  67 aagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctc 166  Q
    |||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||| || ||||||    
T  42813732 aagtattatatgattattt-atcaggttgttaattcaattttctaaaaatcattttataatgttcgtaatttaaaaaagaaaaataagccatcccctctc 42813830  T
Q  167 atcccctcctaaaccctccatcgaaaaacaccct 200  Q
     |||||||||||||||| |||| ||| |||||||    
T  42813831 ttcccctcctaaacccttcatccaaacacaccct 42813864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 63 - 203
Target Start/End: Original strand, 45257415 - 45257554
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||| || |||||    
T  45257415 tttgaagtattatatgatcattt-atcatattgttaattcaattttcaaaaaatcattttataatatccgtaatttaaaaaagaaaagtaaaccatctcc 45257513  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacaccctaaa 203  Q
    || | |||| ||||||| |||||||| ||| ||||||||||    
T  45257514 tcccttcccatcctaaaacctccatccaaacacaccctaaa 45257554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 63 - 155
Target Start/End: Complemental strand, 15085836 - 15085744
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaa-tttaaaaaggaaaagtaagc 155  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||    
T  15085836 tttgaagtattatatgatcattt-atcaagttgttaattcaattttctaaaaatcattttataatgtccgtaattttaaaaaaaaaaagtaagc 15085744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 93 - 203
Target Start/End: Original strand, 22356140 - 22356251
Alignment:
Q  93 ttgttaattcaattttctaaaaatcattttataa-tgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaa 191  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | | ||||| |||| | |||||||||||| |||| ||| ||    
T  22356140 ttgttaattcaattttctaaaaatcattttataaatgtccgtaatttaaaaaagaaaaatgaaccctcccctcccttcccctcctaaatcctcaatccaa 22356239  T
Q  192 aaacaccctaaa 203  Q
    | ||||||||||    
T  22356240 acacaccctaaa 22356251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 63 - 150
Target Start/End: Original strand, 35325377 - 35325463
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaag 150  Q
    ||||||||||||||||||||||| |||| ||| ||||||||||||| ||||||| |||||||||||||  ||||||||||||||||||    
T  35325377 tttgaagtattatatgatcattt-atcatgttattaattcaattttttaaaaattattttataatgtcgttaatttaaaaaggaaaag 35325463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 31061467 - 31061588
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaattt-aaaaaggaaaagtaagccctctc 161  Q
    |||||| |||||||||||||||| |||| |||||||||||||||||| |||| ||| ||||||||||| ||||||| ||||| |||||||||  |||| |    
T  31061467 tttgaaatattatatgatcattt-atcatgttgttaattcaattttcaaaaagtcactttataatgtctgtaatttaaaaaaagaaaagtaaatcctccc 31061565  T
Q  162 ctctcatcccctcctaaaccctc 184  Q
    |||   |||||||||||||||||    
T  31061566 ctccattcccctcctaaaccctc 31061588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 143
Target Start/End: Complemental strand, 3094489 - 3094410
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaa 143  Q
    |||||||||||||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| || |||||||||||||    
T  3094489 tttgaagtattatatgattattt-atcatgttgttaattcaattttctaagaatcattttataacgttcgtaatttaaaaa 3094410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 154
Target Start/End: Complemental strand, 42296432 - 42296349
Alignment:
Q  70 tattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaag 154  Q
    |||||||||||||||| || | |||||||||||| |||||||||| |||||||||||| ||||||||||||||| ||||||||||    
T  42296432 tattatatgatcattt-attatgttgttaattcatttttctaaaattcattttataatatccgtaatttaaaaaagaaaagtaag 42296349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 63 - 154
Target Start/End: Complemental strand, 36052223 - 36052133
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaag 154  Q
    |||||||||| |||||||||| | || | ||||||||||||||||||||||||||||||||||||||  |||||||||||  ||||||||||    
T  36052223 tttgaagtatcatatgatcatgt-atgatgttgttaattcaattttctaaaaatcattttataatgtatgtaatttaaaatagaaaagtaag 36052133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 45098277 - 45098355
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaa 142  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||  ||||| |||||||||||||| |||||||||||    
T  45098277 tttgaagtattatatgatcattt-atcatgttgttaattcaatttttcaaaaaccattttataatgtctgtaatttaaaa 45098355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 16713665 - 16713771
Alignment:
Q  96 ttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaac 195  Q
    ||||||||||||||||||||| |||||||||| |||||| ||| |||| |||||  |||| |||||||| | |||  |||||||||||||||| ||| ||    
T  16713665 ttaattcaattttctaaaaattattttataatatccgtagttttaaaaagaaaaacaagctctctcctcccttcctttcctaaaccctccatccaaacac 16713764  T
Q  196 accctaa 202  Q
    |||||||    
T  16713765 accctaa 16713771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 34187705 - 34187759
Alignment:
Q  84 tttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaattt 138  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  34187705 tttatcatgttgttaattcaattttctaaaaatcattttataatgtccataattt 34187759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 164
Target Start/End: Original strand, 21502141 - 21502241
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||||| || ||||||  ||||||||| ||||||||| ||||| |||||||||| |||||| |||||||| ||||| || | |||||||    
T  21502141 tttgaagtattatatgacca-tttatcttgttgttaatgcaattttcttaaaattattttataatatccgtagtttaaaaaagaaaactatgtcctctcc 21502239  T
Q  163 tc 164  Q
    ||    
T  21502240 tc 21502241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 197
Target Start/End: Complemental strand, 31795904 - 31795772
Alignment:
Q  64 ttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcct 163  Q
    |||||||||||||||||| ||| |||| ||||||| || | ||||  ||||| | ||| ||| ||||||||||||||||| |||||||||| |||| |||    
T  31795904 ttgaagtattatatgatcgttt-atcatgttgttattttattttttaaaaaaacttttcatagtgtccgtaatttaaaaacgaaaagtaagtcctcccct 31795806  T
Q  164 ctcatcccctcctaaaccctccatcgaaaaacac 197  Q
    | | || |||| ||||||||||||| ||| ||||    
T  31795805 cccttcacctcataaaccctccatccaaacacac 31795772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 143
Target Start/End: Complemental strand, 1052891 - 1052812
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaa 143  Q
    |||||| ||||||| |||||||| |||| ||||||||||||||||||||||||| |||||||||| ||  |||||||||||    
T  1052891 tttgaaatattatacgatcattt-atcatgttgttaattcaattttctaaaaattattttataatatcgataatttaaaaa 1052812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 143
Target Start/End: Original strand, 33265714 - 33265793
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaa 143  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||| | ||| | |||||||||||    
T  33265714 tttgaagtattatatgatcattt-atcatattgttaattcaattttcaaaaaatcattttacattgttcataatttaaaaa 33265793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 148
Target Start/End: Complemental strand, 8554435 - 8554351
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaa 148  Q
    ||||||||||| || |||||||| |||| | |||||||||||||||  |||||| ||||||||||||||||||||| |||| ||||    
T  8554435 tttgaagtattgtacgatcattt-atcatgatgttaattcaatttttaaaaaattattttataatgtccgtaatttgaaaaagaaa 8554351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 35736335 - 35736431
Alignment:
Q  104 attttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    ||||| |||||| | ||| ||| |||||| |||||||||| ||||||| ||||||| |||| | || |||||||||||||||||| ||| |||||||    
T  35736335 attttttaaaaaacttttcatagtgtccgaaatttaaaaacgaaaagtgagccctcccctcccttcacctcctaaaccctccatccaaacacaccct 35736431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 200
Target Start/End: Original strand, 23748256 - 23748339
Alignment:
Q  117 cattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    ||||| ||| |||||||| |||||||| ||||||| | ||||| |||| | ||||||||||||||||||||| ||| |||||||    
T  23748256 catttcatagtgtccgtagtttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccctccatccaaacacaccct 23748339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 208 - 258
Target Start/End: Original strand, 9288681 - 9288731
Alignment:
Q  208 agtccaattttcgttacttataaacagcaaagcacaacgttgaaactgcac 258  Q
    ||||||||||||||||||||||||| ||||||| |||| ||||||||||||    
T  9288681 agtccaattttcgttacttataaacggcaaagcgcaacattgaaactgcac 9288731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 9631731 - 9631804
Alignment:
Q  127 tgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    ||||||||||||||||| ||||||| | |||||| ||| | | ||||||||||||||||||| ||| |||||||    
T  9631731 tgtccgtaatttaaaaacgaaaagttaaccctcttctccctttccctcctaaaccctccatccaaacacaccct 9631804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 199
Target Start/End: Complemental strand, 36046294 - 36046205
Alignment:
Q  110 taaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccc 199  Q
    |||||| |||||| || ||||||||||||||||| ||||| ||| | ||| ||||   ||||||||||||||||||||| ||| ||||||    
T  36046294 taaaaaacattttctagtgtccgtaatttaaaaatgaaaaataaactctcccctcatttcccctcctaaaccctccatccaaacacaccc 36046205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 31928180 - 31928121
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcatttta 123  Q
    ||||||||||||||||||||||| |||| ||| |||||||||||||  |||||||||||||    
T  31928180 tttgaagtattatatgatcattt-atcatgttattaattcaattttaaaaaaatcatttta 31928121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 35736247 - 35736171
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaat 204  Q
    |||||| ||||||||| ||||| ||| ||||| |||| | ||||||||||||||||| ||| ||| |||||||||||    
T  35736247 gtccgtgatttaaaaaagaaaattaacccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaaat 35736171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 14196823 - 14196877
Alignment:
Q  110 taaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctc 164  Q
    |||||| ||||||||| ||| ||||||||||||| ||||||||||||||| ||||    
T  14196823 taaaaaacattttatagtgttcgtaatttaaaaaagaaaagtaagccctcccctc 14196877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 36347713 - 36347787
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    |||||||||||||||| ||||||||| | ||| | || | ||||||||||||||||| ||| ||| |||||||||    
T  36347713 gtccgtaatttaaaaaagaaaagtaaactctcccttcccttcccctcctaaaccctcaatccaaacacaccctaa 36347787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 887266 - 887335
Alignment:
Q  112 aaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaacc 181  Q
    |||| |||||||||   ||||||||||||||| ||||||||||| ||| |||| | ||||||||||||||    
T  887266 aaaaacattttatagcatccgtaatttaaaaaagaaaagtaagcgctcccctcccttcccctcctaaacc 887335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 2381123 - 2381060
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataat 127  Q
    ||||||||||||||| |||||   |||| ||||| ||||||||||||||||| ||||||||||||    
T  2381123 tttgaagtattatatcatcatca-atcatgttgtcaattcaattttctaaaattcattttataat 2381060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 42296478 - 42296550
Alignment:
Q  131 cgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaa 203  Q
    |||||||||||||  |||||| | |||||||||| | ||||||||||| ||||| ||| ||| ||||||||||    
T  42296478 cgtaatttaaaaaataaaagtgaaccctctcctcccttcccctcctaatccctcaatccaaacacaccctaaa 42296550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 887005 - 886934
Alignment:
Q  111 aaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctc 184  Q
    ||||| ||||||||| |||  |||||||||||| ||||||||||||||| | |  | |||||||||||||||||    
T  887005 aaaaagcattttatattgt--gtaatttaaaaaagaaaagtaagccctcccttaccttcccctcctaaaccctc 886934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 15224868 - 15224938
Alignment:
Q  130 ccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    |||||||||||||| ||||||||| || || |||| | ||||||||||||||||  ||| ||| |||||||    
T  15224868 ccgtaatttaaaaaagaaaagtaaaccatcccctcccttcccctcctaaacccttgatccaaacacaccct 15224938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 187
Target Start/End: Complemental strand, 8426969 - 8426892
Alignment:
Q  110 taaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccat 187  Q
    |||||| ||||| ||| ||||| |||||||||||  |||||||| ||||| | || | ||||||||||||| ||||||    
T  8426969 taaaaaacatttcatagtgtccttaatttaaaaattaaaagtaaaccctcccttcccttcccctcctaaactctccat 8426892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 17380012 - 17380085
Alignment:
Q  127 tgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    ||||||||||||||||| |||||  || || || |||| | ||||||||||||||||| ||| ||| |||||||    
T  17380012 tgtccgtaatttaaaaatgaaaatcaaaccatcccctcacttcccctcctaaaccctcaatccaaacacaccct 17380085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 36566927 - 36566874
Alignment:
Q  123 ataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcct 176  Q
    ||||||||||||||||||||| |||||||||  |||||| || | |||||||||    
T  36566927 ataatgtccgtaatttaaaaatgaaaagtaaatcctctcatcccttcccctcct 36566874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 188
Target Start/End: Original strand, 40022528 - 40022605
Alignment:
Q  111 aaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatc 188  Q
    ||||| ||||| ||| |||| |||||||||||| |||| |||| ||||| |||| | || |||| |||||||||||||    
T  40022528 aaaaaacatttcatagtgtctgtaatttaaaaatgaaatgtaaaccctcccctcccttctcctcttaaaccctccatc 40022605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 887158 - 887210
Alignment:
Q  100 ttcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagta 152  Q
    ||||||||| |||||| ||||||| |  |||||||||||||||| ||||||||    
T  887158 ttcaattttttaaaaaacattttacagcgtccgtaatttaaaaaagaaaagta 887210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 9288645 - 9288677
Alignment:
Q  200 taaattatagtccaattttcgttacttataaac 232  Q
    |||||| ||||||||||||||||||||||||||    
T  9288645 taaattgtagtccaattttcgttacttataaac 9288677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 9e-45; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 63 - 202
Target Start/End: Complemental strand, 8815277 - 8815139
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||| ||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | || ||    
T  8815277 tttgaagtattatataatcattt-atcatgttgttgattcaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaagtaagtcatcacc 8815179  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    |||| ||||||||||||||||||||| ||| |||||||||    
T  8815178 tctcttcccctcctaaaccctccatccaaacacaccctaa 8815139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 63 - 202
Target Start/End: Original strand, 43732795 - 43732933
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||| ||    
T  43732795 tttgaagtattatatgatcattt-atcatattgttaattcaattttcaaaaaatcattttataatgtccgtaatttaaaaaagaaaagtaaaccctcccc 43732893  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    || | ||||||||||||||||||||| ||| |||||||||    
T  43732894 tcccttcccctcctaaaccctccatccaaacacaccctaa 43732933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 63 - 202
Target Start/End: Complemental strand, 12022279 - 12022140
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||    
T  12022279 tttgaagtattatatgatcattt-atcatgttgttaattcaattttctaaaaatcattttataatgttcgtaatttaaaaaagaaaagtaagccctcccc 12022181  T
Q  163 tctcatcccctcct-aaaccctccatcgaaaaacaccctaa 202  Q
    || | |||||| || ||||||||||||  || |||||||||    
T  12022180 tcccttccccttctcaaaccctccatcctaacacaccctaa 12022140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 63 - 197
Target Start/End: Original strand, 16024262 - 16024394
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||| ||    
T  16024262 tttgaagtattatatgatcattt-atcatgttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaa-gaaaagtaaactctcccc 16024359  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacac 197  Q
    || | |||||||||||| |||||||| ||| ||||    
T  16024360 tcccttcccctcctaaatcctccatccaaacacac 16024394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 63 - 202
Target Start/End: Original strand, 34196417 - 34196553
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||    
T  34196417 tttgaagtattatatgatcgttt-atcttgttgttaattcaattttctaaaaatcattttataatgtctgtaatttaaaaa-gaaaagtaagccctc-cc 34196513  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
     | | ||||||||||||||||||||| |||  ||||||||    
T  34196514 ccccttcccctcctaaaccctccatccaaacgcaccctaa 34196553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 30365238 - 30365374
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    |||||||| |||||| ||||||| |||| |||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||| |||||||| ||    
T  30365238 tttgaagtgttatataatcattt-atcatgttgttaattcaattttctaaaaatcatttcataatgtctgtaatttaaaaaagaaaaggaagccctcccc 30365336  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    || | | |||| ||||| |||||||| ||| |||||||    
T  30365337 tcccttacccttctaaatcctccatccaaacacaccct 30365374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 8671930 - 8671839
Alignment:
Q  63 tttgaagtattatatgatcattttat-caagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaa 153  Q
    |||||||||||||||||||||||| | ||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8671930 tttgaagtattatatgatcatttttttcatattgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaagaaaaagtaa 8671839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 67 - 152
Target Start/End: Original strand, 29937614 - 29937698
Alignment:
Q  67 aagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagta 152  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||    
T  29937614 aagtattatatgatcattt-atcatgttgttaattcaattttctaaaaatcattttataatgtccataattttaaaaagaaaagta 29937698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 158
Target Start/End: Complemental strand, 20472828 - 20472734
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccct 158  Q
    ||||||||||||||||||||| | ||||  |||||||||||||||||||||| | ||||||||||||| |||||||||||| ||||||||||||||    
T  20472828 tttgaagtattatatgatcatat-atcatattgttaattcaattttctaaaatttattttataatgtctgtaatttaaaaaagaaaagtaagccct 20472734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 203
Target Start/End: Complemental strand, 40633125 - 40632993
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    |||||| |||||||  ||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||       ||||||||||||||  |    
T  40633125 tttgaaatattatacaatcattt-atcatgttgttaattcaattttctaaaaattattttataatgtccgtaattt-------aaaagtaagccctcctc 40633034  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacaccctaaa 203  Q
    || | ||||||||||||||||||||  ||| ||||||||||    
T  40633033 tcccttcccctcctaaaccctccattcaaacacaccctaaa 40632993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 180
Target Start/End: Original strand, 6453292 - 6453408
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    |||||||||||||||||| | || |||| ||| |||||||||||||||||||||||||||||||||   ||||||||||||||||||| ||| |||| ||    
T  6453292 tttgaagtattatatgattactt-atcatgttattaattcaattttctaaaaatcattttataatgattgtaatttaaaaaggaaaagcaagtcctcccc 6453390  T
Q  163 tctcatcccctcctaaac 180  Q
    |  | |||||| ||||||    
T  6453391 ttccttccccttctaaac 6453408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 164
Target Start/End: Original strand, 9933349 - 9933449
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    |||||| |||||||||||||||| |||| ||||||||||||||||| | ||||||||||||||||||||  | |||||||| ||||||||| ||||| ||    
T  9933349 tttgaaatattatatgatcattt-atcatgttgttaattcaatttttttaaaatcattttataatgtccaaattttaaaaaagaaaagtaaaccctcccc 9933447  T
Q  163 tc 164  Q
    ||    
T  9933448 tc 9933449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 164
Target Start/End: Original strand, 39449412 - 39449512
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||||||||||  |||| ||||||||||||||||| ||||||| ||||||||| |||  ||| ||||||| | || |||||||||| ||    
T  39449412 tttgaagtattatatgatcatta-atcatgttgttaattcaattttttaaaaataattttataacgtctttaaattaaaaaaggaatgtaagccctcccc 39449510  T
Q  163 tc 164  Q
    ||    
T  39449511 tc 39449512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 31543244 - 31543320
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaat 204  Q
    |||| ||||||||||| ||||||||| ||||| |||| | ||||||||||||||||| ||||||| |||||||||||    
T  31543244 gtccataatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatcgaaacacaccctaaat 31543320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 31738585 - 31738669
Alignment:
Q  118 attttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    |||||||| ||||||||||||||||| ||||  ||| ||||| ||| || ||||||||||||||||||||| ||| |||||||||    
T  31738585 attttatagtgtccgtaatttaaaaatgaaatttaaaccctcccctttcttcccctcctaaaccctccatccaaacacaccctaa 31738669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 124
Target Start/End: Original strand, 43826440 - 43826500
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttat 124  Q
    ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| |||||||    
T  43826440 tttgaagtattttatgatcattt-atcatgttgttaattcaattttctaaaaattattttat 43826500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 138
Target Start/End: Complemental strand, 9434435 - 9434360
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatca-ttttataatgtccgtaattt 138  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||| ||||||| | ||||||||| ||||||||||    
T  9434435 tttgaagtattatattatcattt-atcatgttgttaattcaattttttaaaaattatttttataatatccgtaattt 9434360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 11785688 - 11785772
Alignment:
Q  118 attttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    |||| ||||||||||||||||||||| |||||  || ||||| | |||| | ||||||||||||||||||| ||| |||||||||    
T  11785688 atttcataatgtccgtaatttaaaaatgaaaatcaaaccctcccttctcttaccctcctaaaccctccatccaaacacaccctaa 11785772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 12022298 - 12022387
Alignment:
Q  111 aaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    ||||| ||||||| | |||||||||||||||||  |||||| ||||||| ||||   ||||||||||||||||| ||| ||| |||||||    
T  12022298 aaaaaacattttacattgtccgtaatttaaaaaataaaagtgagccctcccctcctttcccctcctaaaccctcaatccaaacacaccct 12022387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 16653105 - 16653174
Alignment:
Q  112 aaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaacc 181  Q
    |||| ||||| ||||||||||||||||||||| ||||| ||| |||||||||| | ||||||| ||||||    
T  16653105 aaaaacatttcataatgtccgtaatttaaaaatgaaaattaaaccctctcctcccttcccctcttaaacc 16653174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 1281215 - 1281159
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctc 184  Q
    |||||||||||||||| ||||||||| ||||||| || | |||||||||||||||||    
T  1281215 gtccgtaatttaaaaaagaaaagtaaaccctctcatcccttcccctcctaaaccctc 1281159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 188
Target Start/End: Complemental strand, 31543160 - 31543084
Alignment:
Q  112 aaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatc 188  Q
    |||| ||||| ||| | ||||||||||||||| ||||||||| ||||| |||| | ||||||| |||||||||||||    
T  31543160 aaaaacatttcatagtttccgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcttaaaccctccatc 31543084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 36309012 - 36309075
Alignment:
Q  125 aatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatc 188  Q
    ||||| ||||||||||| | ||||||||| ||||| |||| | |||||||||||||||||||||    
T  36309012 aatgtacgtaatttaaagatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatc 36309075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 200
Target Start/End: Complemental strand, 41103641 - 41103504
Alignment:
Q  64 ttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaattt--aaaaaggaaaagtaagccctctc 161  Q
    |||||||||||||||||| ||| |||| ||| ||  || |||||| | |||| | ||| ||| ||||| ||||||  ||||| |||||  || ||||| |    
T  41103641 ttgaagtattatatgatcgttt-atcatgttattgttttaatttttttaaaaacgtttcatagtgtccataatttttaaaaacgaaaatcaaaccctccc 41103543  T
Q  162 ctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    ||||| ||||||||||||||||||||| ||| |||||||    
T  41103542 ctctcttcccctcctaaaccctccatccaaacacaccct 41103504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 64 - 154
Target Start/End: Complemental strand, 24243182 - 24243095
Alignment:
Q  64 ttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaag 154  Q
    ||||||||||||||||||| ||||||| ||| ||| ||||||||| |||||  ||||||||| ||| |||||||| |||| ||||||||||    
T  24243182 ttgaagtattatatgatca-tttatcatgttattatttcaatttt-taaaagacattttatagtgt-cgtaatttcaaaatgaaaagtaag 24243095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 3726936 - 3726860
Alignment:
Q  127 tgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaa 203  Q
    ||||||||||||||||| ||||| ||| || ||   || | ||||||||||||||||||||| ||| ||||||||||    
T  3726936 tgtccgtaatttaaaaatgaaaaataaaccgtcctttcccttcccctcctaaaccctccatccaaacacaccctaaa 3726860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 30581985 - 30582033
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcct 176  Q
    |||||||||||||||| ||||||||||||||| |||| | |||||||||    
T  30581985 gtccgtaatttaaaaaagaaaagtaagccctcccctcccttcccctcct 30582033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 16024242 - 16024155
Alignment:
Q  111 aaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacacc 198  Q
    ||||||||||||||| ||| |||||||||||||  |||| | ||| ||| |||| | |||| |||||||||||| ||| ||| |||||    
T  16024242 aaaaatcattttatattgttcgtaatttaaaaacaaaaactgagctctcccctcccttcccttcctaaaccctcaatccaaacacacc 16024155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 203
Target Start/End: Original strand, 7503131 - 7503201
Alignment:
Q  133 taatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaa 203  Q
    ||||||||||| ||||||||| ||||| |||| | |||||||| ||| |||| ||| ||| ||||||||||    
T  7503131 taatttaaaaacgaaaagtaaaccctcccctcccctcccctcccaaagcctcaatccaaacacaccctaaa 7503201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 13405120 - 13405177
Alignment:
Q  95 gttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaa 153  Q
    ||||||||| ||||  |||||| ||||| |||||||||||||||||||| |||||||||    
T  13405120 gttaattcacttttaaaaaaat-attttttaatgtccgtaatttaaaaatgaaaagtaa 13405177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 8815296 - 8815385
Alignment:
Q  111 aaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    ||||| ||||||| | ||| |||||||||||||  |||||| | ||||| |||| |  |||||||||||||||| ||| ||| |||||||    
T  8815296 aaaaaacattttacagtgttcgtaatttaaaaattaaaagtgaaccctcccctccctccccctcctaaaccctcaatccaaacacaccct 8815385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 10028182 - 10028126
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctc 184  Q
    |||||||||||||||| |||||||||   ||| ||||  ||||||||||||||||||    
T  10028182 gtccgtaatttaaaaaagaaaagtaaaatctcacctcctatcccctcctaaaccctc 10028126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 9e-45; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 63 - 202
Target Start/End: Original strand, 33519156 - 33519294
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||| ||||| ||    
T  33519156 tttgaagtattatatgatcattt-atcatgttgttaattcaattttctaaaaatcattttataatgtctgtaatttaaagaagaaaagtaatccctcccc 33519254  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    || | ||||||||||||||||||||| ||| |||||||||    
T  33519255 tcccttcccctcctaaaccctccatccaaacacaccctaa 33519294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 202
Target Start/End: Complemental strand, 36267689 - 36267551
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||||||||||| ||||  ||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| ||    
T  36267689 tttgaagtattatatgatcattt-atcatattgttgattcaattttctaaaaatcattttataatatccgtaatttaaaaaagaaaactaagccctcccc 36267591  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    || | ||||||||||||||||||||| ||| |||||||||    
T  36267590 tcccttcccctcctaaaccctccatccaaacacaccctaa 36267551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 63 - 202
Target Start/End: Complemental strand, 48881694 - 48881556
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||| ||||||| ||||||| |||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||| || ||    
T  48881694 tttgaagcattatataatcattt-atcatgttgttaattcaattttctgaaaattattttataatgtccgtaatttaaaaaagaaaagtaagccatcccc 48881596  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    || | ||||||||||||||||||||| ||| |||||||||    
T  48881595 tcccttcccctcctaaaccctccatccaaacacaccctaa 48881556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 63 - 200
Target Start/End: Complemental strand, 28074239 - 28074103
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||  ||| ||    
T  28074239 tttgaagtattatatgatcattt-atcaggttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaagtgagttctcccc 28074141  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    || | |||||||||||||| || ||| ||| |||||||    
T  28074140 tcccttcccctcctaaaccttcaatccaaacacaccct 28074103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 35422072 - 35422192
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    |||||||||| ||||||| |||| || | ||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||| |||||  |    
T  35422072 tttgaagtatcatatgattattt-attatgttgttaattcaattttctaaaaattattttataatgtccgtaattttaaaaagaaaagtaaaccctccac 35422170  T
Q  163 tctcatcccctcctaaaccctc 184  Q
    |||  | |||||||||||||||    
T  35422171 tctatttccctcctaaaccctc 35422192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 63 - 188
Target Start/End: Original strand, 37620882 - 37621006
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||| ||| |||||||| |||| ||||||||||||| ||||||||||||||||||||| ||||||||||| |||||| || ||||| ||    
T  37620882 tttgaagtattatataatc-ttttatcatgttgataattcaattttccaaaaatcattttataatgtccataatttaaaaaagaaaagcaaaccctcccc 37620980  T
Q  163 tctcatcccctcctaaaccctccatc 188  Q
    || | |||| ||  ||||||||||||    
T  37620981 tcccttcccttctcaaaccctccatc 37621006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 71 - 188
Target Start/End: Original strand, 48015323 - 48015439
Alignment:
Q  71 attatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcc 170  Q
    ||||||||||||||| |||| |||||||||||||||||| |||||| ||||||||| ||| |||||||||||| ||||||||||| |||  ||| | |||    
T  48015323 attatatgatcattt-atcatgttgttaattcaattttccaaaaattattttataaagtctgtaatttaaaaacgaaaagtaagctctcatctcccttcc 48015421  T
Q  171 cctcctaaaccctccatc 188  Q
    |||||||| |||||||||    
T  48015422 cctcctaatccctccatc 48015439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 164
Target Start/End: Original strand, 21857455 - 21857554
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    |||||| |||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||  |||||||||| |||||||    
T  21857455 tttgaaatattgtatgatcattt-atcatgttgttaattcaattttctaaaaatcattttataatgttcgtaa-ttaaaagagaaaagtaagtcctctcc 21857552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 64 - 200
Target Start/End: Complemental strand, 30592388 - 30592253
Alignment:
Q  64 ttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcct 163  Q
    ||||||||||||||||| |||| ||||  |  ||| ||||||||| |||||||||||||||| |||| |||||||||||| ||||||||||||||| | |    
T  30592388 ttgaagtattatatgattattt-atcatatgattatttcaattttttaaaaatcattttatagtgtctgtaatttaaaaaagaaaagtaagccctccctt 30592290  T
Q  164 ctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    | | | |||||||||| |||||||| ||| |||||||    
T  30592289 ccctttccctcctaaatcctccatccaaatacaccct 30592253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 63 - 143
Target Start/End: Original strand, 39646577 - 39646656
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaa 143  Q
    ||||||||||||||| |||||   |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39646577 tttgaagtattatatcatcatca-atcatgttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaa 39646656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 63 - 175
Target Start/End: Complemental strand, 31364178 - 31364070
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    |||||||||||||||||||||||    | || ||| |||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||| ||| ||    
T  31364178 tttgaagtattatatgatcattt----atgtcgttgattcaattttcttaaaatcattttataatgtccgtaatttagaaaagaaaagtaagctctcccc 31364083  T
Q  163 tctcatcccctcc 175  Q
    || | ||||||||    
T  31364082 tcccttcccctcc 31364070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 154
Target Start/End: Complemental strand, 2087879 - 2087785
Alignment:
Q  63 tttgaagtattatatgatcattt---tatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaag 154  Q
    |||||||||||||||||||| ||   ||||| |||||||||||| |||| ||||||| |||||||||| ||||||||||||||| ||||||||||    
T  2087879 tttgaagtattatatgatcaattatttatcatgttgttaattcatttttttaaaaattattttataatatccgtaatttaaaaaagaaaagtaag 2087785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 179
Target Start/End: Original strand, 37925949 - 37926064
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||| |||||   |||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||| | || |||| ||    
T  37925949 tttgaagtattatatcatcatca-atcatgttgttaattcaattttctaaacatcattttataatgtccgtaatttagaaaagaaaaatgagtcctcccc 37926047  T
Q  163 tctcatcccctcctaaa 179  Q
    || | |||| |||||||    
T  37926048 tcccttcccttcctaaa 37926064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 65 - 188
Target Start/End: Complemental strand, 3215994 - 3215874
Alignment:
Q  65 tgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctc 164  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||| ||  ||||||| |||| ||||| ||||||||| ||||    
T  3215994 tgaagtattatatgatcattt-atcatattgttaattcaattttctaaaaatcattttataa-gtttgtaatttgaaaaagaaaactaagccctc-cctc 3215898  T
Q  165 tcatcccctcctaaaccctccatc 188  Q
     | ||||||| |||| | ||||||    
T  3215897 ccttcccctcttaaatcttccatc 3215874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 74 - 164
Target Start/End: Original strand, 48013622 - 48013711
Alignment:
Q  74 atatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctc 164  Q
    |||||||||||| |||| ||||||||||||||||||||||||| ||||||||| ||| || ||||||||| ||||||||||| ||| ||||    
T  48013622 atatgatcattt-atcatgttgttaattcaattttctaaaaattattttataaagtctgtgatttaaaaacgaaaagtaagctctcccctc 48013711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 63 - 204
Target Start/End: Original strand, 16833803 - 16833946
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataat---gtccgtaatttaaaaaggaaaagtaagccctc 159  Q
    |||||||||||| |||||||||| |||| ||| ||||||||||||| ||||||| || |||||||   ||| ||||||| |||| |||||||||  ||||    
T  16833803 tttgaagtattacatgatcattt-atcatgttattaattcaattttataaaaattatattataatgaagtctgtaattttaaaaagaaaagtaactcctc 16833901  T
Q  160 tcctctcatcccctcctaaaccctccatcgaaaaacaccctaaat 204  Q
    ||||  | ||||||| |||| ||| |||| ||| |||||||||||    
T  16833902 tccttccttcccctcttaaatcctgcatccaaacacaccctaaat 16833946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 40196667 - 40196530
Alignment:
Q  64 ttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcct 163  Q
    |||||||||||||||||  ||| |||| |||| ||  | || ||| || ||| ||||||||| ||||||||||| ||||| ||||||||| |||||  ||    
T  40196667 ttgaagtattatatgattgttt-atcaggttgatatgttaactttttataaaacattttatagtgtccgtaattcaaaaatgaaaagtaaaccctcctct 40196569  T
Q  164 ctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    | | |||||||| |||||||||||| ||| |||||||||    
T  40196568 cccttcccctcccaaaccctccatccaaacacaccctaa 40196530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 159
Target Start/End: Complemental strand, 23116395 - 23116300
Alignment:
Q  64 ttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatca-ttttataatgtccgtaatttaaaaaggaaaagtaagccctc 159  Q
    |||||||||||||| ||||||| |||| |||| || ||||||||| ||| || || ||||||| |||| |||||||||||| |||||||||||||||    
T  23116395 ttgaagtattatataatcattt-atcatgttgctatttcaattttttaataaacacttttatagtgtctgtaatttaaaaaagaaaagtaagccctc 23116300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 39856037 - 39856109
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    |||||||||||||||| ||||||||| ||||| |||| | ||||||||||||||||| ||| ||| |||||||    
T  39856037 gtccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 39856109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 4833614 - 4833543
Alignment:
Q  117 cattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatc 188  Q
    ||||| ||| |||| |||||||||||| ||||||||| ||||| |||| | |||||||||||||||||||||    
T  4833614 catttcatagtgtctgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatc 4833543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 188
Target Start/End: Complemental strand, 33519142 - 33519060
Alignment:
Q  106 tttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatc 188  Q
    |||| ||||| ||||||||| ||| |||||||||||||  |||||| ||||||| |||| | |||||||||||| ||||||||    
T  33519142 tttcaaaaaaacattttatattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaacctccatc 33519060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 203
Target Start/End: Original strand, 33655285 - 33655355
Alignment:
Q  133 taatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaa 203  Q
    ||||||||||| ||||||||| ||||| |||||| ||||||||||||||||| ||| ||| |||| |||||    
T  33655285 taatttaaaaaagaaaagtaaaccctcgcctctcttcccctcctaaaccctcaatccaaacacactctaaa 33655355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 41497092 - 41496955
Alignment:
Q  64 ttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcct 163  Q
    |||||| ||||||||||||||| |||| |||  ||  | || ||| |||||| |||||  || |||||||||||||||||  ||||||||  | || |||    
T  41497092 ttgaagaattatatgatcattt-atcatgttaatatgttaaatttttaaaaaacatttcctattgtccgtaatttaaaaataaaaagtaaatcatcccct 41496994  T
Q  164 ctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    | | ||||||||||||||||||||| ||| |||||||||    
T  41496993 cccttcccctcctaaaccctccatccaaacacaccctaa 41496955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 13771101 - 13771190
Alignment:
Q  111 aaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    ||||| ||| |||||  |||||||||||||||| ||||||||| | ||| |||| | ||||||||||||||||| ||| ||| |||||||    
T  13771101 aaaaaacatgttatatagtccgtaatttaaaaacgaaaagtaaactctcacctcccttcccctcctaaaccctcaatctaaacacaccct 13771190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 200
Target Start/End: Original strand, 18231695 - 18231830
Alignment:
Q  64 ttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcct 163  Q
    |||||||||||||||||| ||| |||| |||  ||  | || ||| |||||| ||||| ||| |||  |||||||||||| |||||||||  |||| |||    
T  18231695 ttgaagtattatatgatcgttt-atcatgttaatatgttaactttttaaaaaacatttcatagtgtttgtaatttaaaaatgaaaagtaaatcctcccct 18231793  T
Q  164 ctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    | | ||||||||||||| ||||||| ||| |||||||    
T  18231794 cccttcccctcctaaacgctccatccaaacacaccct 18231830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 199
Target Start/End: Original strand, 31571625 - 31571713
Alignment:
Q  111 aaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccc 199  Q
    ||||| ||| |||||  |||||||||||||||| ||||||||| | ||| |||| | ||||||||||||||||| ||| ||| ||||||    
T  31571625 aaaaagcatgttatatggtccgtaatttaaaaaagaaaagtaaactctcccctcgcttcccctcctaaaccctcaatccaaacacaccc 31571713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 143
Target Start/End: Original strand, 3143588 - 3143671
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttg----ttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaa 143  Q
    |||||||||||||||||||| |||||||  |||    ||||||||||||| ||||||| |||||||||||||  |||||||||||    
T  3143588 tttgaagtattatatgatca-tttatcattttgttaattaattcaattttttaaaaattattttataatgtcattaatttaaaaa 3143671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 130
Target Start/End: Original strand, 8122264 - 8122322
Alignment:
Q  71 attatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtc 130  Q
    |||||||||| |||| ||||  |||||||||||||||||||||||| |||||||||||||    
T  8122264 attatatgataattt-atcatcttgttaattcaattttctaaaaattattttataatgtc 8122322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 159
Target Start/End: Complemental strand, 33655243 - 33655149
Alignment:
Q  64 ttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctc 159  Q
    |||||||||||||||||||||| |||| |||  ||  | || ||| |||||| ||||| ||| ||||||||||||||||| ||||||||| |||||    
T  33655243 ttgaagtattatatgatcattt-atcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctc 33655149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 13771030 - 13770944
Alignment:
Q  118 attttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaat 204  Q
    |||||||| |||||||||||||||||  | ||||||  |||| |||| | |||||||||||| |||| ||| ||| |||||||||||    
T  13771030 attttatagtgtccgtaatttaaaaataataagtaaatcctcccctcccttcccctcctaaatcctcaatccaaacacaccctaaat 13770944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 47391019 - 47391105
Alignment:
Q  119 ttttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaatt 205  Q
    ||||||| ||||||||||||||||| |||||  || | ||| |||| | ||||||| ||||||||||||| ||| ||||||| ||||    
T  47391019 ttttatagtgtccgtaatttaaaaatgaaaaccaaactctcccctcccttcccctcttaaaccctccatccaaacacacccttaatt 47391105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 1051673 - 1051742
Alignment:
Q  131 cgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    ||||||||||||| ||||| |||  ||||||||| | ||||||||||||||||| ||| ||| |||||||    
T  1051673 cgtaatttaaaaaagaaaaataaatcctctcctcccttcccctcctaaaccctcaatccaaacacaccct 1051742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 108
Target Start/End: Complemental strand, 12670972 - 12670928
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaatttt 108  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||    
T  12670972 tttgaagtattatatgatca-tttatcatgttgttaattcaatttt 12670928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 200
Target Start/End: Complemental strand, 37925930 - 37925841
Alignment:
Q  111 aaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    ||||| ||||||| | ||| |||||||||||||  |||||| | ||||| |||| | ||||||||||||||||| ||| ||| |||||||    
T  37925930 aaaaaacattttacattgttcgtaatttaaaaaataaaagtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 37925841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 197
Target Start/End: Original strand, 42306484 - 42306571
Alignment:
Q  110 taaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacac 197  Q
    |||||| ||||| ||| ||||||||||||||||| ||||| ||| || || ||||   ||||||||||||||||| ||| ||| ||||    
T  42306484 taaaaaacatttcatagtgtccgtaatttaaaaatgaaaattaaaccatcccctcaattcccctcctaaaccctcaatccaaacacac 42306571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 203
Target Start/End: Complemental strand, 47390922 - 47390852
Alignment:
Q  133 taatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaa 203  Q
    ||||||||||| ||||||||| |||||  ||| | ||||||||||| ||||| ||| ||| ||||||||||    
T  47390922 taatttaaaaaagaaaagtaaaccctccactcccttcccctcctaacccctcaatccaaacacaccctaaa 47390852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 48094005 - 48094090
Alignment:
Q  67 aagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaa 153  Q
    ||||||||||||||||||| ||||  || ||| ||||||| | ||||||  ||||||||  || ||||||||||||| |||||||||    
T  48094005 aagtattatatgatcattt-atcattttattatttcaattctataaaaaagattttatagcgttcgtaatttaaaaaagaaaagtaa 48094090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 206
Target Start/End: Complemental strand, 12670633 - 12670526
Alignment:
Q  100 ttcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctca--tcccctcctaaaccctccatcgaaaaacac 197  Q
    ||||||||||||| ||| || ||||||  || |||||||||||| |||||||| | |||| |||||||  |||| |||||||| || |||| ||| ||||    
T  12670633 ttcaattttctaacaattatattataaaatctgtaatttaaaaaagaaaagtatgtcctc-cctctcaattcccttcctaaactctgcatctaaagacac 12670535  T
Q  198 cctaaatta 206  Q
    ||| |||||    
T  12670534 cctcaatta 12670526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 203
Target Start/End: Complemental strand, 31553272 - 31553182
Alignment:
Q  110 taaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaa 203  Q
    |||||| ||||| ||||||||||| ||||||||   |||||| | |||||||||| | |||||||||||| |||||||| ||| ||||||||||    
T  31553272 taaaaaacatttcataatgtccgttatttaaaatt-aaaagtga-ccctctcctcccttcccctcctaaa-cctccatccaaacacaccctaaa 31553182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 1051573 - 1051517
Alignment:
Q  127 tgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccct 183  Q
    ||||||||||||||||| |||| || | ||||| |||||  ||||||||||||||||    
T  1051573 tgtccgtaatttaaaaatgaaatgttaaccctcccctctattcccctcctaaaccct 1051517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 36267729 - 36267797
Alignment:
Q  132 gtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    ||||||||||||  |||| | ||||||| |||| | ||||||||||||||||| ||| ||| |||||||    
T  36267729 gtaatttaaaaaataaaaatgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 36267797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 3e-44; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 34641100 - 34641234
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||| ||    
T  34641100 tttgaagtattatatgatcattt-atcatgttgttaattcaattttctaaa--tcattttataatgtccgtaatttaaaaaagaaaagtaagccctcccc 34641196  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    || | ||||||||||||||||||||| ||| |||||||    
T  34641197 tcccttcccctcctaaaccctccatccaaacacaccct 34641234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 63 - 203
Target Start/End: Original strand, 24253830 - 24253969
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    |||||||| |||||| ||||||| |||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||  |||  ||    
T  24253830 tttgaagtgttatataatcattt-atcatgttgttaattcaactttctaaaactcattttataatgtccgtaatttaaaaaagaaaagtaaatccttccc 24253928  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacaccctaaa 203  Q
    || | |||||| |||||||||||||| ||| ||||||||||    
T  24253929 tcccttccccttctaaaccctccatccaaacacaccctaaa 24253969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 63 - 155
Target Start/End: Complemental strand, 18086117 - 18086025
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagc 155  Q
    ||||||||||| |||||||||||||| | |||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||    
T  18086117 tttgaagtattttatgatcattttattatgttgttaattcaattttctaaaaaacattttataatgtctgtaatttaaaaaagaaaagtaagc 18086025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 63 - 187
Target Start/End: Original strand, 26135905 - 26136028
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||| || |||| ||||  ||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||| |||||  |    
T  26135905 tttgaagtattatataattattt-atcatattgttaattcaattttcaaaaaattattttataatgtccgtaatttaaaaaagaaaagtaaaccctccac 26136003  T
Q  163 tctcatcccctcctaaaccctccat 187  Q
    || | ||||||||||||||||||||    
T  26136004 tcccttcccctcctaaaccctccat 26136028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 63 - 164
Target Start/End: Original strand, 40858673 - 40858773
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||| ||| ||||| ||    
T  40858673 tttgaagtattatatgatcattt-atcatgttgttaattcaattttcaaaagatcattttataatgtccgtaatttaaaaaagaaaactaaaccctcccc 40858771  T
Q  163 tc 164  Q
    ||    
T  40858772 tc 40858773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 55428492 - 55428607
Alignment:
Q  68 agtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctca 167  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||| || |||||||||||||||||| | |||||||||  | || |||| |     
T  55428492 agtattatatgatcattt-atcacgttgttaattcaattttctaaaaatcatcttgtaatgtccgtaatttaaagaagaaaagtaaatcatcccctccct 55428590  T
Q  168 tcccctcctaaaccctc 184  Q
    |||||||||||||||||    
T  55428591 tcccctcctaaaccctc 55428607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 200
Target Start/End: Complemental strand, 8432395 - 8432261
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||  || |||| |||| ||||||||||||||||| ||||||||||||||||||||| |||||| |||||  ||||||||| |||| ||    
T  8432395 tttgaagtattataaaattattt-atcatgttgttaattcaattttgtaaaaatcattttataatgtctgtaattaaaaaa--aaaagtaagtcctcccc 8432299  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    |||| ||||||| ||||||||||||  ||| |||||||    
T  8432298 tctcttcccctcgtaaaccctccattcaaacacaccct 8432261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 138
Target Start/End: Original strand, 42772140 - 42772214
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaattt 138  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  42772140 tttgaagtattatatgatcattt-atcatgttgttaattcaattttcaaaaaatcattttataatgtccgtaattt 42772214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 54985836 - 54985730
Alignment:
Q  63 tttgaagtattatatgatcatt------ttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagcc 156  Q
    ||||||||||||||||||||||      ||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||     
T  54985836 tttgaagtattatatgatcattattcatttatcatattgttaattcaattttctaaaaatcaatttataatgtccgtaatttaaaaacgaaaactaagct 54985737  T
Q  157 ctctcct 163  Q
    |||||||    
T  54985736 ctctcct 54985730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 63 - 143
Target Start/End: Original strand, 41414186 - 41414265
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaa 143  Q
    ||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||| | |||||||||    
T  41414186 tttgaagtattatatgatcattt-atcatgttgttaactcaattttctaaaaatcattttataatgtccctgatttaaaaa 41414265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 48683720 - 48683806
Alignment:
Q  63 tttgaagtattatatgatcattttatcaa-gttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaa 149  Q
    |||||| |||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||    
T  48683720 tttgaaatattatatgatcattt-atcaatgttgttaattcaatttcctaaaaatcattttataatgttcgtaatttaaaaaagaaaa 48683806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 188
Target Start/End: Complemental strand, 10943750 - 10943626
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||| || |||| || | |||||||||||||||||||||||||||||||||||| ||  ||||||||||| ||||| |||  | |||||    
T  10943750 tttgaagtattatataattattt-attatgttgttaattcaattttctaaaaatcattttataatatctataatttaaaaaagaaaattaaatcttctcc 10943652  T
Q  163 tctcatcccctcctaaaccctccatc 188  Q
    ||   ||||||| |||||||||||||    
T  10943651 tcctttcccctcttaaaccctccatc 10943626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 203
Target Start/End: Original strand, 44412469 - 44412608
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    |||||||||||||||||| |||| |||| |||||||||||||||||| ||||||||||||| | ||| |||||||||||||  |||||| || |||| ||    
T  44412469 tttgaagtattatatgatgattt-atcatgttgttaattcaattttcaaaaaatcattttacattgttcgtaatttaaaaaataaaagtgagtcctcccc 44412567  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacaccctaaa 203  Q
    || | |||||||  ||||| || ||| ||| ||||| ||||    
T  44412568 tcccttcccctcacaaaccatcaatccaaacacaccttaaa 44412608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 17474342 - 17474253
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaa 153  Q
    ||||||||||||| |||| |||| ||||  ||||||||||||||||  |||||| |||||||||||||||||||||||||| |||||||||    
T  17474342 tttgaagtattatttgattattt-atcatattgttaattcaatttttaaaaaattattttataatgtccgtaatttaaaaaagaaaagtaa 17474253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 42699748 - 42699668
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaag 144  Q
    ||||||||||||||||||||||| ||||  ||| |||||||||||||||||| | |||||||||||||| ||||||||||||    
T  42699748 tttgaagtattatatgatcattt-atcatattgataattcaattttctaaaatttattttataatgtccataatttaaaaag 42699668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 21090207 - 21090129
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaa 142  Q
    |||||||||||||||||| || | |||| |||||||||||||||||| ||||||| ||||||||| || |||||||||||    
T  21090207 tttgaagtattatatgataatat-atcatgttgttaattcaattttcaaaaaatcgttttataatatctgtaatttaaaa 21090129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 36727284 - 36727362
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaa 142  Q
    |||||||||||||||||| |||| |||| |||||||| | |||||||| ||||| |||||||||||| ||||||||||||    
T  36727284 tttgaagtattatatgataattt-atcatgttgttaagttaattttcttaaaattattttataatgttcgtaatttaaaa 36727362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 41110403 - 41110318
Alignment:
Q  118 attttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaa 203  Q
    |||| ||| ||||||||||||||||| ||||||||| || ||||||| | |||||||||||| |||||||| ||| ||||| ||||    
T  41110403 atttcatagtgtccgtaatttaaaaatgaaaagtaaaccttctcctcccttcccctcctaaatcctccatccaaacacaccataaa 41110318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 24560326 - 24560463
Alignment:
Q  64 ttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcct 163  Q
    |||||||||||||||||| ||| |||| |||  ||  | || ||| |||||| ||||| ||| |||| |||||||||||| ||||||||| | ||| | |    
T  24560326 ttgaagtattatatgatcgttt-atcatgttaatatgttaactttttaaaaaacatttcatagtgtcggtaatttaaaaatgaaaagtaaactctcccat 24560424  T
Q  164 ctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    |   ||||||||||||||||||||| ||| |||||||||    
T  24560425 ccgttcccctcctaaaccctccatccaaacacaccctaa 24560463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 18654682 - 18654597
Alignment:
Q  118 attttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaa 203  Q
    ||||||||  |||||||||||||||| ||||  ||| ||||| | |||| | ||||||||||||||||||| ||| ||||||||||    
T  18654682 attttatagggtccgtaatttaaaaatgaaatctaaaccctcccatctctttccctcctaaaccctccatccaaacacaccctaaa 18654597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 28582681 - 28582757
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaat 204  Q
    |||||||||||||||| ||||||||| ||||| |||| | |||||||||||| ||||  || ||| |||||||||||    
T  28582681 gtccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaatcctcagtccaaacacaccctaaat 28582757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 46978535 - 46978594
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcatttta 123  Q
    ||||||||||||||| ||||||| |||| |||||||||| |||||| ||||||||||||||    
T  46978535 tttgaagtattatataatcattt-atcatgttgttaattaaattttataaaaatcatttta 46978594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 27197786 - 27197734
Alignment:
Q  62 atttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaa 115  Q
    |||| ||||||||||||||||| | |||| ||||||||||||||||||||||||    
T  27197786 atttaaagtattatatgatcatct-atcatgttgttaattcaattttctaaaaa 27197734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 220569 - 220645
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaat 204  Q
    |||||||||||||||| |||||||||   ||| |||| | || |||||||||||||||||| ||| | |||||||||    
T  220569 gtccgtaatttaaaaaagaaaagtaaattctcccctcccttctcctcctaaaccctccatccaaacagaccctaaat 220645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 23028088 - 23028168
Alignment:
Q  118 attttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacacc 198  Q
    |||| ||| |||||||||||||||||  ||||||||| |||  |||||  |||||||| |||||||||||| ||| |||||    
T  23028088 atttcatagtgtccgtaatttaaaaataaaaagtaagtcctgccctcttttcccctcccaaaccctccatccaaacacacc 23028168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 45663279 - 45663203
Alignment:
Q  64 ttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaa 143  Q
    ||||||||||||| ||||| ||||||| ||||||| |||||||||| |||||| |||||||| ||| ||| |||||||||    
T  45663279 ttgaagtattataagatca-tttatcatgttgttatttcaattttcaaaaaat-attttatagtgttcgt-atttaaaaa 45663203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 6803377 - 6803426
Alignment:
Q  132 gtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaacc 181  Q
    |||||||||||| ||||| ||| | |||||||||| ||||||||||||||    
T  6803377 gtaatttaaaaaagaaaattaaactctctcctctcttcccctcctaaacc 6803426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 184
Target Start/End: Original strand, 14898135 - 14898208
Alignment:
Q  111 aaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctc 184  Q
    ||||| |||||| |||||||||||||||||||| ||||  |||   |||||||||| ||| ||| |||||||||    
T  14898135 aaaaaacattttgtaatgtccgtaatttaaaaatgaaagctaaattctctcctctcttcctctcttaaaccctc 14898208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 30200263 - 30200320
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctcc 185  Q
    |||||||||||||||| ||||||||| ||||  |||| | |||||||||| |||||||    
T  30200263 gtccgtaatttaaaaaagaaaagtaaacccttccctcccttcccctcctataccctcc 30200320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 159
Target Start/End: Complemental strand, 16884107 - 16884014
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctc 159  Q
    |||||||||||||||||||| ||||||| |||||| |||||||||| ||||| |  |||||| || |  |||| ||||||| |||| ||||||||||    
T  16884107 tttgaagtattatatgatca-tttatcatgttgtt-attcaattttttaaaattttttttat-atatttgtaaattaaaaaagaaatgtaagccctc 16884014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 24560289 - 24560217
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    |||||||||||||||| |||||  || ||||| |||| | ||||||||||||||||  ||| ||| |||||||    
T  24560289 gtccgtaatttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 24560217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 3e-41; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 67 - 188
Target Start/End: Original strand, 35512909 - 35513029
Alignment:
Q  67 aagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctc 166  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| |    
T  35512909 aagtattatatgatcattt-atcatgttgttaattcaattttctaaaaatcattttataatgtccataatttaaaaaataaaagtaagccctcccctccc 35513007  T
Q  167 atcccctcctaaaccctccatc 188  Q
     |||||||||||||||||||||    
T  35513008 ttcccctcctaaaccctccatc 35513029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 63 - 200
Target Start/End: Complemental strand, 1085626 - 1085489
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaattta-aaaaggaaaagtaagccctctc 161  Q
    ||||||||||||||||||||||| |||| | ||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||| |    
T  1085626 tttgaagtattatatgatcattt-atcatgctgttagttcaattttctaaaaatcattttctaatgtccgtaatttaaaaaaggaaaagtaagtcctccc 1085528  T
Q  162 ctctcat-cccctcctaaaccctccatcgaaaaacaccct 200  Q
    ||| ||| |||||||||||||||||||| ||| |||||||    
T  1085527 ctc-catccccctcctaaaccctccatccaaacacaccct 1085489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 63 - 188
Target Start/End: Original strand, 25268372 - 25268496
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||||||||||| |||| |||||| ||| ||||||||||||||||||||||||| ||||||||||||||| | ||||||| ||||| ||    
T  25268372 tttgaagtattatatgatcattt-atcacgttgttgattaaattttctaaaaatcattttataatttccgtaatttaaaaaaggaaagtaaaccctcccc 25268470  T
Q  163 tctcatcccctcctaaaccctccatc 188  Q
    || | |||||| ||||||||||||||    
T  25268471 tcacttccccttctaaaccctccatc 25268496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 63 - 200
Target Start/End: Complemental strand, 51303520 - 51303384
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||  ||||||||||||| | |||  ||||| ||||||  |||||| ||||||| ||    
T  51303520 tttgaagtattatatgatcattt-atcatgttgttaattcaattttaaaaaaatcattttacattgttggtaatataaaaaataaaagtgagccctcccc 51303422  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    || | ||||||||||||||||| ||| ||| |||||||    
T  51303421 tcccctcccctcctaaaccctcaatccaaacacaccct 51303384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 151
Target Start/End: Original strand, 47071159 - 47071246
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagt 151  Q
    |||||| |||| ||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47071159 tttgaaatattttatgatcattt-atcatgttgttaattaaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaagt 47071246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 63 - 202
Target Start/End: Complemental strand, 40709428 - 40709290
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||||||||||| ||||  | ||||||| |||||||||||||| |||||||||| | ||||||||||||| |||||||||| ||||  |    
T  40709428 tttgaagtattatatgatcattt-atcatatcgttaatttaattttctaaaaattattttataatattcgtaatttaaaaaagaaaagtaagtcctcctc 40709330  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    || | ||||||| |||||| |  ||| ||| |||||||||    
T  40709329 tcccttcccctcttaaaccttaaatccaaacacaccctaa 40709290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 13387049 - 13386966
Alignment:
Q  69 gtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaa 153  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||| |||||| |||||| ||||| ||||| |||||||||    
T  13387049 gtattatatgatcattt-atcatgttgttaattcaattttctaaaaatcgttttatgatgtccataattaaaaaaagaaaagtaa 13386966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 20607327 - 20607461
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaa-agtaagccctctc 161  Q
    |||||||||||||||||| || | ||||   |||||||| ||||||| ||||||||||||||||||||| ||||| |||||  ||| ||||| ||||| |    
T  20607327 tttgaagtattatatgataatat-atca---tgttaatttaattttcaaaaaatcattttataatgtccataattaaaaaaaaaaatagtaaaccctccc 20607422  T
Q  162 ctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    ||| | ||||||||||||||||||||| ||| |||||||    
T  20607423 ctcccttcccctcctaaaccctccatccaaacacaccct 20607461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 63 - 198
Target Start/End: Original strand, 2506647 - 2506781
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||||||||||| || |  |||||||||| ||||| ||||||| |||||||||| || |||||||||||| ||||| |||| | |||||    
T  2506647 tttgaagtattatatgatcattt-attatattgttaattcgattttttaaaaattattttataatatctgtaatttaaaaaagaaaactaagtcatctcc 2506745  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacacc 198  Q
    || | ||| || |||||| ||||||| ||| |||||    
T  2506746 tcccttcctcttctaaactctccatccaaacacacc 2506781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 153
Target Start/End: Original strand, 35927921 - 35928009
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaa 153  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| |||||||||  || |||||||||||| |||||||||    
T  35927921 tttgaagtattatatgatcattt-atcatgttgttaattcaattttct-aaaattattttataaaatctgtaatttaaaaaagaaaagtaa 35928009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 525235 - 525148
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaa 153  Q
    ||||||||||||||| ||||||| ||||  ||||||||||||||| |||||||| |||||||| ||||||||||||||||| |||||||||    
T  525235 tttgaagtattatataatcattt-atcatattgttaattcaattt-ctaaaaattattttata-tgtccgtaatttaaaaaagaaaagtaa 525148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 1344676 - 1344741
Alignment:
Q  84 tttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaa 149  Q
    ||||||| ||||||  |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  1344676 tttatcatgttgttggttcaattttctaaaaatcattttacaatgtccgtaatttaaaaaagaaaa 1344741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 148
Target Start/End: Original strand, 33643376 - 33643460
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaa 148  Q
    ||||||||||||||||||||||  ||||  || |||||||||||||||||||||||||||| ||||| | ||||||||||| ||||    
T  33643376 tttgaagtattatatgatcattc-atcatattattaattcaattttctaaaaatcattttaaaatgttcataatttaaaaaagaaa 33643460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 202
Target Start/End: Complemental strand, 40095016 - 40094931
Alignment:
Q  117 cattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    ||||| ||| ||||||||||||||||| ||||||||| ||||| |||  | ||||||||||||||||||||| ||| |||||||||    
T  40095016 catttcatagtgtccgtaatttaaaaatgaaaagtaaaccctccccttccttcccctcctaaaccctccatccaaacacaccctaa 40094931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 203
Target Start/End: Original strand, 12234164 - 12234257
Alignment:
Q  110 taaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaa 203  Q
    |||||| |||||  || ||||||||||||||||| ||||| ||| ||||| |||| | ||||||||||||||||||||| ||| ||||| ||||    
T  12234164 taaaaaacatttcgtagtgtccgtaatttaaaaatgaaaactaaaccctcccctcccttcccctcctaaaccctccatccaaacacaccataaa 12234257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 203
Target Start/End: Complemental strand, 38509991 - 38509891
Alignment:
Q  103 aattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    |||||| |||||  ||||| ||| ||||||||||||||||| ||||||| | |||||  ||| | ||||||||||||||||| ||| ||| |||||||||    
T  38509991 aattttttaaaagacatttcatagtgtccgtaatttaaaaatgaaaagtgaaccctcctctcccttcccctcctaaaccctctatccaaacacaccctaa 38509892  T
Q  203 a 203  Q
    |    
T  38509891 a 38509891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 30010486 - 30010576
Alignment:
Q  110 taaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    |||||| |||||  || |||||||||||| |||| ||||||||| ||||| |||| | |||||| |||||||||||||| ||| |||||||    
T  30010486 taaaaaacatttcgtagtgtccgtaatttcaaaatgaaaagtaaaccctcccctcccttccccttctaaaccctccatccaaacacaccct 30010576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 204
Target Start/End: Complemental strand, 2470819 - 2470726
Alignment:
Q  111 aaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaat 204  Q
    ||||| ||||||||| ||| ||||||||||||| | |||  || |||||   |||| ||||||||||||||||||||| ||| |||||||||||    
T  2470819 aaaaaacattttatagtgttcgtaatttaaaaatgtaaacgaaaccctccattctcttcccctcctaaaccctccatccaaacacaccctaaat 2470726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 204
Target Start/End: Original strand, 41498513 - 41498653
Alignment:
Q  64 ttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcct 163  Q
    |||||||||||||||||| ||| |||| |||  ||  | || ||| || ||| ||||| ||| ||||||||||||||||| |||||||||  |||| |||    
T  41498513 ttgaagtattatatgatcgttt-atcatgttaatatgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaatcctcccct 41498611  T
Q  164 ctcat-cccctcctaaaccctccatcgaaaaacaccctaaat 204  Q
    | | | |||||||||||| ||||||| ||| |||||||||||    
T  41498612 cccttacccctcctaaactctccatccaaacacaccctaaat 41498653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 12234082 - 12234010
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    |||||||||||||||| ||||| ||||||||  |||| | ||||||||||||||||| ||| ||| |||||||    
T  12234082 gtccgtaatttaaaaaagaaaattaagccctaccctcccttcccctcctaaaccctcaatccaaacacaccct 12234010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 35349634 - 35349710
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaat 204  Q
    |||||||||||||||| ||||||||| ||||| |||| | ||||||| ||||||||  ||| ||| |||||||||||    
T  35349634 gtccgtaatttaaaaacgaaaagtaaaccctcccctcccttcccctcataaacccttaatccaaacacaccctaaat 35349710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 143
Target Start/End: Complemental strand, 40287391 - 40287313
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaa 143  Q
    ||||||||||||||| ||||||| || |  |||||||||||||||||||||| |||||| | ||||||| |||||||||||    
T  40287391 tttgaagtattatataatcattt-atgattttgttaattcaattttctaaaactcatttcacaatgtcc-taatttaaaaa 40287313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 197
Target Start/End: Original strand, 7444649 - 7444736
Alignment:
Q  110 taaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacac 197  Q
    |||||||||||||||| |||||||||||| |||| ||||| ||| ||||| |||||| |||| | |||||| || |||| ||| ||||    
T  7444649 taaaaatcattttatagtgtccgtaattttaaaatgaaaactaaaccctcccctctcttccctttctaaactcttcatccaaacacac 7444736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 41498471 - 41498404
Alignment:
Q  133 taatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    ||||||||||| ||||||||| ||||| |||| | ||||||||||||||||| ||| ||| |||||||    
T  41498471 taatttaaaaacgaaaagtaaaccctcccctcacttcccctcctaaaccctcaatccaaacacaccct 41498404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 166
Target Start/End: Original strand, 41676436 - 41676491
Alignment:
Q  111 aaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctc 166  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||| ||||| ||||||    
T  41676436 aaaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctctc 41676491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 30010404 - 30010330
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    |||||||||||||| | |||||||||  |||| |||| | ||||||||||||||||| ||| ||| |||||||||    
T  30010404 gtccgtaatttaaacaagaaaagtaaatcctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 30010330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 1085665 - 1085738
Alignment:
Q  131 cgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaat 204  Q
    |||||||||||||  |||||| || | ||||||| | ||||||||||||||||| ||| ||| |||||||||||    
T  1085665 cgtaatttaaaaaataaaagtgagtcatctcctcccttcccctcctaaaccctctatccaaacacaccctaaat 1085738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 201
Target Start/End: Complemental strand, 2859000 - 2858931
Alignment:
Q  132 gtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacacccta 201  Q
    |||||||| ||| ||||||||| ||||| |||| | | ||||||||||||||||||| ||| ||||||||    
T  2859000 gtaatttagaaatgaaaagtaaaccctcccctccctttccctcctaaaccctccatccaaacacacccta 2858931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 10392028 - 10392115
Alignment:
Q  111 aaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaa 203  Q
    ||||| ||||| |||||||  |||||||||||| ||||||||| | ||||||     ||||||||||||||||||||| ||| ||| ||||||    
T  10392028 aaaaaacatttaataatgtttgtaatttaaaaacgaaaagtaaactctctcc-----tcccctcctaaaccctccatccaaacacagcctaaa 10392115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 32951490 - 32951565
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaa 203  Q
    |||||||||||||||| ||||||||| | ||| |||| | ||| ||||||||| ||| ||| ||| ||||||||||    
T  32951490 gtccgtaatttaaaaacgaaaagtaaactctcccctcccttcctctcctaaactctcaatccaaacacaccctaaa 32951565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 154
Target Start/End: Original strand, 52707753 - 52707843
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaag 154  Q
    ||||||||||||||| ||||||| |||| ||||||| |  | ||||  |||||| |||| |||||||  |||||||||||| ||||||||||    
T  52707753 tttgaagtattatatcatcattt-atcatgttgttattaaatttttaaaaaaattatttgataatgttggtaatttaaaaaagaaaagtaag 52707843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 35349537 - 35349466
Alignment:
Q  127 tgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    ||||||||||||||||| ||||||||| ||  |||| | | ||||||| ||||||||||||| ||| |||||||    
T  35349537 tgtccgtaatttaaaaatgaaaagtaaacc--ctccccccctcccctcttaaaccctccatccaaacacaccct 35349466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 2859104 - 2859157
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaacc 181  Q
    ||||||||||||||||  |||||||| ||||| |||| | ||||||||||||||    
T  2859104 gtccgtaatttaaaaaataaaagtaaaccctcccctcccttcccctcctaaacc 2859157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 159
Target Start/End: Original strand, 1738112 - 1738144
Alignment:
Q  127 tgtccgtaatttaaaaaggaaaagtaagccctc 159  Q
    ||||| |||||||||||||||||||||||||||    
T  1738112 tgtccctaatttaaaaaggaaaagtaagccctc 1738144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 10391944 - 10391888
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctc 184  Q
    |||||||||||||||| ||||||||| ||||| ||||   |||||||||||| ||||    
T  10391944 gtccgtaatttaaaaatgaaaagtaaaccctcccctcgtttcccctcctaaaacctc 10391888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 5e-40; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 63 - 198
Target Start/End: Complemental strand, 54576463 - 54576329
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||| ||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||| ||    
T  54576463 tttgaagtattatataatcattt-atcacgttgttaattcaattttctataaatcattttataatgtccgtaatctaaaaaagaaaagtaagccctcccc 54576365  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacacc 198  Q
    || | |||||| |||||||||||||| ||| |||||    
T  54576364 tcccttccccttctaaaccctccatccaaacacacc 54576329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 72 - 200
Target Start/End: Original strand, 5825013 - 5825140
Alignment:
Q  72 ttatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatccc 171  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||  ||||||| | | |||     
T  5825013 ttatatgatcattt-atcatgttgttaattcaattttctaaaaatcattttataatgtctgtaattcaaaaaagaaaagtaaatcctctccccacttcct 5825111  T
Q  172 ctcctaaaccctccatcgaaaaacaccct 200  Q
    ||||||||||||||||| ||| |||||||    
T  5825112 ctcctaaaccctccatccaaacacaccct 5825140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 63 - 202
Target Start/End: Original strand, 37761572 - 37761710
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    |||||||| |||||| ||||||| |||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||| |||||||| ||    
T  37761572 tttgaagtgttatataatcattt-atcatgttgttaattcaattttctaaaaatcatttcataatgtccataatttaaaaaagaaaaggaagccctcccc 37761670  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    || | ||||||  |||| |||||||| ||| |||||||||    
T  37761671 tcccttccccttttaaatcctccatccaaacacaccctaa 37761710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 63 - 151
Target Start/End: Original strand, 22186827 - 22186914
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagt 151  Q
    ||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22186827 tttgaagtattatataatcattt-atcatgttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaagt 22186914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 63 - 164
Target Start/End: Original strand, 43961518 - 43961618
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||| | ||||||||||| ||||| ||||||||| ||    
T  43961518 tttgaagtattatatgatcattt-atcatgttgataattcaattttctaaaaatcattttataatgttcataatttaaaaaagaaaaataagccctcccc 43961616  T
Q  163 tc 164  Q
    ||    
T  43961617 tc 43961618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 197
Target Start/End: Complemental strand, 4437561 - 4437428
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    |||||||||||||||||||| || |||| ||||||||||||||||| |||||||||||||||||| ||| ||||||||||| ||||| |||| | || ||    
T  4437561 tttgaagtattatatgatcaatt-atcatgttgttaattcaattttttaaaaatcattttataatatccataatttaaaaaagaaaaataagtcatcccc 4437463  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacac 197  Q
    || | | || |||||||||||||||| ||| ||||    
T  4437462 tccctttccatcctaaaccctccatccaaacacac 4437428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 21695024 - 21694905
Alignment:
Q  64 ttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcct 163  Q
    |||||||||||||||||||||  ||||  |||||| ||||||||  |||||| ||||||||| ||||||||||||||||| ||||||||||||||| | |    
T  21695024 ttgaagtattatatgatcatt--atcattttgttatttcaatttattaaaaaccattttatagtgtccgtaatttaaaaaagaaaagtaagccctcccgt 21694927  T
Q  164 ctcatcccctcctaaaccctcc 185  Q
    | | ||||||||||||||||||    
T  21694926 cccttcccctcctaaaccctcc 21694905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 159
Target Start/End: Original strand, 55080687 - 55080782
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctc 159  Q
    ||||||||||| ||||||||||| |||| |||||||||| |||||||||||||| |||||||||||| ||||||||||||| |||||||||| ||||    
T  55080687 tttgaagtattttatgatcattt-atcatgttgttaattaaattttctaaaaattattttataatgttcgtaatttaaaaaagaaaagtaagtcctc 55080782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 164
Target Start/End: Complemental strand, 7977632 - 7977531
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaattta-aaaaggaaaagtaagccctctc 161  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||| ||| || |||||||||||| ||||||||| |||| ||||||||||||||| |    
T  7977632 tttgaagtattatatgatcattt-atcatgttgttaattcaattttcaaaatattattttataatgttcgtaatttaaaaaaagaaaagtaagccctccc 7977534  T
Q  162 ctc 164  Q
    |||    
T  7977533 ctc 7977531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 63 - 183
Target Start/End: Complemental strand, 29993907 - 29993788
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||| |||||   |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||   || ||||  |    
T  29993907 tttgaagtattatatcatcatca-atcatgttgttaattcaattttctaaaaatcattttatagtgtccgtaatttaaaaaagaaaaacgagtcctccac 29993809  T
Q  163 tctcatcccctcctaaaccct 183  Q
    || | ||||||||||||||||    
T  29993808 tcacttcccctcctaaaccct 29993788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 63 - 202
Target Start/End: Original strand, 34995159 - 34995295
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    |||||||||||||| ||| |||| |||| |||  ||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||| | |  ||    
T  34995159 tttgaagtattataagattattt-atcatgtt--taattcaattttctaaaaatcatttgataatatccgtaatttaaaaaagaaaagtaagtcttaccc 34995255  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    || | |||| |||||||||||| ||| ||| |||||||||    
T  34995256 tcacttcccttcctaaaccctcaatctaaacacaccctaa 34995295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 155
Target Start/End: Complemental strand, 54001239 - 54001151
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagc 155  Q
    ||||||||||||||||||||||| ||||   ||||||||||||||| ||||||| ||||||||||||||||||||||||||  ||||||||||    
T  54001239 tttgaagtattatatgatcattt-atca---tgttaattcaattttttaaaaattattttataatgtccgtaatttaaaaaacaaaagtaagc 54001151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 188
Target Start/End: Original strand, 51329903 - 51330026
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||| ||||||| ||||  ||||||||||||||||||| |||| |||||||||| ||| |||||||||||  |||||||||| ||||||    
T  51329903 tttgaagtattatataatcattt-atcattttgttaattcaattttctataaattattttataatatccctaatttaaaaa-aaaaagtaagctctctcc 51330000  T
Q  163 tctcatcccctcctaaaccctccatc 188  Q
    |||  | |||| ||||| ||||||||    
T  51330001 tcttttacccttctaaatcctccatc 51330026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 153
Target Start/End: Original strand, 11089624 - 11089713
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaa 153  Q
    ||||||||| ||||||||||||| || | ||||||||||||||||||||||||  ||||||||| |||||||||||||||| |||| ||||    
T  11089624 tttgaagtaatatatgatcattt-atgatgttgttaattcaattttctaaaaaatattttataaagtccgtaatttaaaaaagaaatgtaa 11089713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 47846191 - 47846102
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaa 153  Q
    |||||||||||||||||| |||| |||| ||| ||||||||||||| ||||||| ||||||||||||||  |||||||||| |||||||||    
T  47846191 tttgaagtattatatgattattt-atcatgttcttaattcaattttgtaaaaattattttataatgtccagaatttaaaaaagaaaagtaa 47846102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 17182621 - 17182530
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaatttt--ctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaa 153  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||  | |||||||||||||||| |||  ||||||||||| |||||||||    
T  17182621 tttgaagtattatatgatcattt-atcatattgttaattcaatttttgcaaaaaatcattttataacgtcaataatttaaaaaagaaaagtaa 17182530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 203
Target Start/End: Original strand, 37711285 - 37711370
Alignment:
Q  118 attttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaa 203  Q
    |||||||| ||||||||||||||||| ||||  ||| ||||| |||| | ||||||||||||||||||||| ||| ||||||||||    
T  37711285 attttatagtgtccgtaatttaaaaatgaaatctaaaccctcccctcccttcccctcctaaaccctccatccaaacacaccctaaa 37711370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 202
Target Start/End: Original strand, 54935230 - 54935315
Alignment:
Q  117 cattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    ||||| ||| ||||||||||||||||| ||||| ||| ||||| |||| | ||||||||||||||||||||| ||| |||||||||    
T  54935230 catttcatagtgtccgtaatttaaaaatgaaaaataaaccctcccctcccttcccctcctaaaccctccatccaaacacaccctaa 54935315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 198
Target Start/End: Original strand, 27735899 - 27735987
Alignment:
Q  110 taaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacacc 198  Q
    |||||| ||||||||| ||||||||||||||||| ||||| | | |||| ||||| | ||||||||||||||||||||| ||| |||||    
T  27735899 taaaaaacattttatagtgtccgtaatttaaaaatgaaaaatgaaccctatcctcccttcccctcctaaaccctccatccaaacacacc 27735987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 164
Target Start/End: Original strand, 44145842 - 44145939
Alignment:
Q  66 gaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctc 164  Q
    ||||||||| |||||||||| || | | ||||||||||||||| |||||||||||||||||||||  ||| ||||||| | || |||||||||| ||||    
T  44145842 gaagtattacatgatcattt-ataatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctc 44145939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 139
Target Start/End: Original strand, 14539380 - 14539455
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaattta 139  Q
    ||||||||||||||||||||||| || | ||| |||||| |||||||||| || ||||||||||||| |||||||||    
T  14539380 tttgaagtattatatgatcattt-attatgttcttaatttaattttctaacaaacattttataatgttcgtaattta 14539455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 6938401 - 6938491
Alignment:
Q  110 taaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    |||||| ||||||||||| ||||||||||||||| ||||||| | ||||| ||||   ||||||| |||||| |||||| ||| |||||||    
T  6938401 taaaaaacattttataatatccgtaatttaaaaatgaaaagtgaaccctcccctccattcccctcataaaccttccatccaaacacaccct 6938491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 45132667 - 45132741
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    |||||||||||||||| ||||||||| || ||||||||| ||||||||||||| ||| ||  ||| |||||||||    
T  45132667 gtccgtaatttaaaaaagaaaagtaaaccatctcctctcttcccctcctaaactctcaattcaaacacaccctaa 45132741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 5730912 - 5730827
Alignment:
Q  118 attttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaa 203  Q
    ||||||||  |||||||||||||||| ||||  ||| ||||| | |||| | ||||||||||||||||||| ||| ||||||||||    
T  5730912 attttatagggtccgtaatttaaaaatgaaatctaaaccctcccatctctttccctcctaaaccctccatccaaacacaccctaaa 5730827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 9030328 - 9030396
Alignment:
Q  67 aagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaat 136  Q
    ||||||||||| ||||||| ||||  || |||||| |||||||||||||||||||||||||||| |||||    
T  9030328 aagtattatataatcattt-atcattttattaattaaattttctaaaaatcattttataatgtctgtaat 9030396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 49735541 - 49735468
Alignment:
Q  127 tgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    ||||||||||||||||| ||||||| | ||||| |||| | ||||||||||||||||| ||| ||| |||||||    
T  49735541 tgtccgtaatttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 49735468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 188
Target Start/End: Complemental strand, 17938242 - 17938119
Alignment:
Q  64 ttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcct 163  Q
    |||||||||||||||||| ||| |||| ||| ||| || || ||| |||||| ||||  ||||||||| ||||||||||| ||||| ||| | ||  |||    
T  17938242 ttgaagtattatatgatcgttt-atcatgttattattttaaatttttaaaaaacattccataatgtccataatttaaaaacgaaaattaaactcttccct 17938144  T
Q  164 ctcatcccctcctaaaccctccatc 188  Q
    |   |||||||||||||||||||||    
T  17938143 ccattcccctcctaaaccctccatc 17938119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 200
Target Start/End: Original strand, 45741999 - 45742134
Alignment:
Q  64 ttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcct 163  Q
    |||||||||||||||||| ||| |||| |||  ||  | || ||| |||||| ||||| ||| ||||||||||||||||| ||||||||| | ||| |||    
T  45741999 ttgaagtattatatgatcgttt-atcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaactctcccct 45742097  T
Q  164 ctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    | | | ||| |||||||||| |||| ||| |||||||    
T  45742098 ccctttcccgcctaaacccttcatccaaacacaccct 45742134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 188
Target Start/End: Original strand, 55510280 - 55510400
Alignment:
Q  65 tgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctc 164  Q
    |||||||||||||||||| || |||| ||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||  |||||||| ||||| | |     
T  55510280 tgaagtattatatgatca-ttcatcatgttgttatttcaatttttttaaaat-attttatagtgttcgtaatttaaaaa-taaaagtaaaccctcacatt 55510376  T
Q  165 tcatcccctcctaaaccctccatc 188  Q
    || | ||||| ||||| |||||||    
T  55510377 tctttccctcttaaactctccatc 55510400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 200
Target Start/End: Complemental strand, 24565436 - 24565346
Alignment:
Q  110 taaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    |||||| |||||  |||| ||||||||||||||| ||||||||| ||||| ||  || |||| ||||||||| |||||| ||| |||||||    
T  24565436 taaaaagcatttcgtaatatccgtaatttaaaaatgaaaagtaaaccctccccagtcttcccttcctaaaccttccatccaaacacaccct 24565346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 203
Target Start/End: Complemental strand, 31348411 - 31348313
Alignment:
Q  110 taaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctc-----ctaaaccctccatcgaaaaacaccctaaa 203  Q
    |||||| ||||| ||| ||||||||||||||||| ||||||||| ||||  |||| | |||||||     |||||||||||||| ||| ||||||||||    
T  31348411 taaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaacccttccctcccttcccctcataaactaaaccctccatccaaacacaccctaaa 31348313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 35543411 - 35543353
Alignment:
Q  96 ttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaag 154  Q
    ||||||||||||| ||||||| |||||||||||| | ||||||||||| ||||| ||||    
T  35543411 ttaattcaattttttaaaaattattttataatgttcctaatttaaaaaagaaaaataag 35543353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 41174499 - 41174589
Alignment:
Q  110 taaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    |||||| ||||| ||| ||||| ||| ||||||| ||||| ||| || || |||| | ||||||||||||||||||||| ||| |||||||    
T  41174499 taaaaaccatttcatagtgtccctaaattaaaaatgaaaactaaaccatcccctcccttcccctcctaaaccctccatccaaacacaccct 41174589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 73 - 127
Target Start/End: Original strand, 51075215 - 51075268
Alignment:
Q  73 tatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataat 127  Q
    ||||||||||||| |||| ||||||||||||||||| ||||||| ||||||||||    
T  51075215 tatatgatcattt-atcatgttgttaattcaattttttaaaaattattttataat 51075268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 27735834 - 27735761
Alignment:
Q  111 aaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctc 184  Q
    ||||| ||| |||||  |||||||||||||||| ||||| ||| ||||||| || | |||||||||||||||||    
T  27735834 aaaaaacatgttatatagtccgtaatttaaaaatgaaaattaaaccctctcttcccttcccctcctaaaccctc 27735761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 23813189 - 23813137
Alignment:
Q  112 aaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctc 164  Q
    |||| ||||||||| |||||||||||||| || |||||||||| |||||||||    
T  23813189 aaaaacattttatagtgtccgtaatttaacaatgaaaagtaagtcctctcctc 23813137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 31348493 - 31348565
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    |||||| ||||||||| ||||||||| ||||| |||| | ||||||||||||| ||| ||| ||| |||||||    
T  31348493 gtccgttatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaactctcaatccaaacacaccct 31348565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 46007879 - 46007947
Alignment:
Q  134 aatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    |||||||||| ||||||||| ||||| |||| | ||||||||||||||||| ||| ||| |||| ||||    
T  46007879 aatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacactctaa 46007947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 204
Target Start/End: Complemental strand, 47694433 - 47694345
Alignment:
Q  117 cattttataatgtccgtaatttaaaa-aggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaat 204  Q
    ||||| ||| |||||||||||||||| || |||||||||||||| |||| | ||| |||| ||| |||||||| ||| | |||||||||    
T  47694433 catttcatagtgtccgtaatttaaaagagaaaaagtaagccctcccctcccttccgctccaaaatcctccatccaaacataccctaaat 47694345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 202
Target Start/End: Original strand, 54320588 - 54320680
Alignment:
Q  110 taaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    |||||| | ||| ||| |||||||||||||||||  ||||  || ||||| |||| | ||||||||||||||||| ||| ||| |||||||||    
T  54320588 taaaaaacgtttcatagtgtccgtaatttaaaaattaaaatcaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 54320680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 6938353 - 6938302
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaa 179  Q
    |||||||||||||||||||||| |||  ||||||||| | ||||||||||||    
T  6938353 gtccgtaatttaaaaaggaaaaataaatcctctcctcccttcccctcctaaa 6938302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 54935137 - 54935067
Alignment:
Q  131 cgtaatttaaaaaggaaaagtaagccctctcc-tctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    ||||||||||||| ||||||||| ||||| || || | ||||||||||||||||| ||| ||| |||||||    
T  54935137 cgtaatttaaaaaagaaaagtaaaccctccccctcccttcccctcctaaaccctcaatccaaacacaccct 54935067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 200
Target Start/End: Complemental strand, 56135838 - 56135749
Alignment:
Q  111 aaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    ||||| ||||||| | ||| |||||||||||||  |||| | | ||||| |||| | ||||||||||||||||| ||| ||| |||||||    
T  56135838 aaaaaacattttacattgttcgtaatttaaaaaataaaaatgaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 56135749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 114
Target Start/End: Original strand, 56135857 - 56135904
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaa 114  Q
    |||||||||||||||||||| |||||||   |||||||||||||||||||||    
T  56135857 tttgaagtattatatgatca-tttatca---tgttaattcaattttctaaaa 56135904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 1968531 - 1968603
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    |||||||||||||||| ||||| ||| | ||  |||| | ||||||||||||||||| ||| ||| |||||||    
T  1968531 gtccgtaatttaaaaatgaaaattaaactcttccctcccttcccctcctaaaccctcaatccaaacacaccct 1968603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 149
Target Start/End: Complemental strand, 2247886 - 2247854
Alignment:
Q  117 cattttataatgtccgtaatttaaaaaggaaaa 149  Q
    ||||||||||||||||||||||||||| |||||    
T  2247886 cattttataatgtccgtaatttaaaaatgaaaa 2247854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 180
Target Start/End: Original strand, 6891469 - 6891584
Alignment:
Q  64 ttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcct 163  Q
    |||||||||||||||||| ||| || | ||| ||| || |||||| | |||| || || ||| ||||| ||||||||||| |||||  || | ||| |||    
T  6891469 ttgaagtattatatgatcgttt-ataatgttattattttaatttttttaaaaacaattcatagtgtccataatttaaaaacgaaaatcaaactctcccct 6891567  T
Q  164 ctcatcccctcctaaac 180  Q
    ||| |||||||||||||    
T  6891568 ctcttcccctcctaaac 6891584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 63 - 202
Target Start/End: Original strand, 34980918 - 34981056
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||| ||||||| |||| |||||||| ||||||||||| ||||||||||||||||||| ||||||||||| |||||||||| |||| ||    
T  34980918 tttgaagtattatataatcattt-atcatgttgttaactcaattttctataaatcattttataatgtccataatttaaaaaagaaaagtaagtcctcccc 34981016  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    || | ||||||| ||||||||||||  ||| |||||||||    
T  34981017 tcccttcccctcttaaaccctccattaaaacacaccctaa 34981056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 63 - 203
Target Start/End: Complemental strand, 33744329 - 33744190
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||| | ||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||| ||||| ||    
T  33744329 tttgaagaaatatatgatcattt-atcatgttgttaattcaattttcaaaaaatcattttataatgtccataatttaaaaaagaaaagtaaaccctcccc 33744231  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacaccctaaa 203  Q
    || | || || ||| ||||||||||| ||| ||||||||||    
T  33744230 tcccttctccgccttaaccctccatccaaacacaccctaaa 33744190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 63 - 202
Target Start/End: Complemental strand, 40305801 - 40305668
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||| ||||||||||||| ||||  |||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| ||||||||| ||    
T  40305801 tttgaagtactatatgatcattt-atcatattgttaattcaattttctaaaaattattttataatgtctgtaatttaaaaaagaaaactaagccctc-cc 40305704  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    |    ||||||||||||||||||||| ||| |||||||||    
T  40305703 t----tcccctcctaaaccctccatccaaacacaccctaa 40305668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 63 - 202
Target Start/End: Original strand, 10204684 - 10204822
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||||||||||| || | ||||||||||||||||| ||||||||||||| ||||||| |||| ||||||| |||||||||| |||| ||    
T  10204684 tttgaagtattatatgatcattt-attacgttgttaattcaattttttaaaaatcattttttaatgtctgtaaattaaaaaagaaaagtaagtcctcccc 10204782  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    || | ||||||||||||| |||  || ||| |||||||||    
T  10204783 tcccttcccctcctaaactctctttccaaacacaccctaa 10204822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 85 - 203
Target Start/End: Original strand, 2183943 - 2184061
Alignment:
Q  85 ttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctc 184  Q
    |||||| ||||||| ||||||||| |||| | ||||||||||||||||||||||||| ||||||| |||||||||| || || ||||||| |||||||||    
T  2183943 ttatcatgttgttatttcaattttttaaataacattttataatgtccgtaatttaaagaggaaaaataagccctcttctatcttcccctcttaaaccctc 2184042  T
Q  185 catcgaaaaacaccctaaa 203  Q
    |||| ||| ||||||||||    
T  2184043 catccaaacacaccctaaa 2184061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 67 - 202
Target Start/End: Complemental strand, 15986756 - 15986622
Alignment:
Q  67 aagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctc 166  Q
    |||||||||||||||||||||  | ||||||||||||||||| ||||| ||||||||||||||| |||| ||||||| ||||| |||| |||| |||| |    
T  15986756 aagtattatatgatcattttaa-atgttgttaattcaattttttaaaagtcattttataatgtctgtaaattaaaaaagaaaattaagtcctcccctccc 15986658  T
Q  167 atcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
     |||||||||||||||||  || ||| |||||||||    
T  15986657 ttcccctcctaaaccctctttccaaacacaccctaa 15986622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 164
Target Start/End: Original strand, 10043360 - 10043460
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    |||||||||||||||||| |||| || | |||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||| || |||| ||    
T  10043360 tttgaagtattatatgattattt-ataatgttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtgagtcctcccc 10043458  T
Q  163 tc 164  Q
    ||    
T  10043459 tc 10043460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 6597920 - 6597837
Alignment:
Q  69 gtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaa 153  Q
    ||||||||||||||||| |||| ||||||| |||||||||| ||||||||||||| ||||||||||||||||||| |||||||||    
T  6597920 gtattatatgatcattt-atcatgttgttatttcaattttcaaaaaatcattttacaatgtccgtaatttaaaaaagaaaagtaa 6597837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 198
Target Start/End: Original strand, 1657967 - 1658055
Alignment:
Q  110 taaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacacc 198  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||| ||||| |||| | ||||||||||||||||||||| ||| |||||    
T  1657967 taaaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacacc 1658055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 154
Target Start/End: Original strand, 6382435 - 6382525
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaag 154  Q
    |||||||||| | |||| ||||| |||| ||||||||||||||||||||||||  |||||||||||||||||| ||| ||| ||||||||||    
T  6382435 tttgaagtatcacatgaacattt-atcatgttgttaattcaattttctaaaaagtattttataatgtccgtaaattagaaaagaaaagtaag 6382525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 197
Target Start/End: Original strand, 21581055 - 21581188
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaattt-aaaaaggaaaagtaagccctctc 161  Q
    |||||||||| |||||| ||||| |||| ||||||||||||||||||||||||| |||| |||| |||| |||||| ||||| ||||||| ||  | | |    
T  21581055 tttgaagtatcatatgaacattt-atcatgttgttaattcaattttctaaaaattatttcataacgtccataatttaaaaaaagaaaagttag-tcaccc 21581152  T
Q  162 ctctcatcccctcctaaaccctccatcgaaaaacac 197  Q
    ||| | ||||||||||||||||||||| ||| ||||    
T  21581153 ctcccttcccctcctaaaccctccatccaaacacac 21581188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 200
Target Start/End: Complemental strand, 12036067 - 12035936
Alignment:
Q  67 aagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctc 166  Q
    |||||||||||||| |||| |||| ||||| ||||||||||||||| ||| |||||||||||| | ||||||||||| |||||  ||| ||||  ||| |    
T  12036067 aagtattatatgataattt-atcatgttgt-aattcaattttctaataataattttataatgttcataatttaaaaaagaaaaacaagtcctcctctccc 12035970  T
Q  167 atcccctcctaaaccctccatcgaaaaacaccct 200  Q
     |||||||||||||| || ||| ||| |||||||    
T  12035969 ttcccctcctaaaccatctatccaaacacaccct 12035936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 200
Target Start/End: Complemental strand, 14245182 - 14245088
Alignment:
Q  106 tttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    |||||||||| ||||| | | ||||||||||||||||| |||||||||  |||| |||| | ||||||||||||||||| ||| ||| |||||||    
T  14245182 tttctaaaaaacatttcacagtgtccgtaatttaaaaaagaaaagtaaatcctcccctcccttcccctcctaaaccctcaatccaaacacaccct 14245088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 188
Target Start/End: Original strand, 36363182 - 36363264
Alignment:
Q  106 tttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatc 188  Q
    |||||||||  ||||||||| | ||||||||||||||| ||||||| | | |||||||| | |||||||||||||||||||||    
T  36363182 tttctaaaagacattttatagtatccgtaatttaaaaatgaaaagtgaactctctcctcccttcccctcctaaaccctccatc 36363264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 140
Target Start/End: Complemental strand, 8551550 - 8551478
Alignment:
Q  67 aagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaa 140  Q
    ||||||||||||||||||| || | |||||||||| |||||| ||||||||||||||||||||| ||| |||||    
T  8551550 aagtattatatgatcattt-ataatgttgttaatttaattttttaaaaatcattttataatgtctgtagtttaa 8551478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 13634865 - 13634954
Alignment:
Q  110 taaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccc 199  Q
    |||||| ||||| ||| ||| ||||||||||||| ||||||||| ||||| |||| | ||||||||||||||||| ||| ||| ||||||    
T  13634865 taaaaaacatttcatagtgttcgtaatttaaaaatgaaaagtaacccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 13634954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 154
Target Start/End: Complemental strand, 10043141 - 10043055
Alignment:
Q  67 aagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaag 154  Q
    ||||||||||||||||||| |||| |||||||||||||||||||| |||| ||| | ||||||   |||||||| || ||||||||||    
T  10043141 aagtattatatgatcattt-atcatgttgttaattcaattttctagaaataattctttaatgtttataatttaagaaagaaaagtaag 10043055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 201
Target Start/End: Original strand, 14684639 - 14684729
Alignment:
Q  111 aaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacacccta 201  Q
    ||||| ||||||||| || |||||||| ||||| |||||||||||||||  |||||  |||||||||||||||  ||| ||| ||||||||    
T  14684639 aaaaaacattttatattgcccgtaattaaaaaaagaaaagtaagccctcctctctctgcccctcctaaaccctaaatccaaacacacccta 14684729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 203
Target Start/End: Original strand, 7544290 - 7544383
Alignment:
Q  110 taaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaa 203  Q
    |||||| ||||| ||| ||||||||||||||||| |||||  || ||||| |||  | ||||||||||||||||||||| ||| ||||| ||||    
T  7544290 taaaaaacatttcatagtgtccgtaatttaaaaatgaaaaccaaaccctccccttccttcccctcctaaaccctccatccaaacacaccttaaa 7544383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 203
Target Start/End: Original strand, 11437048 - 11437189
Alignment:
Q  64 ttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaa---gccctct 160  Q
    ||||||||||||| ||||| ||||||  | ||||| || |||||| |||||| ||||||||| ||| | || |||||||| |||||||||   | ||||     
T  11437048 ttgaagtattatacgatca-tttatcgcgctgttattttaattttttaaaaaacattttatagtgttcctattttaaaaaagaaaagtaagtcgtcctcc 11437146  T
Q  161 cctctcatcccctcctaaaccctccatcgaaaaacaccctaaa 203  Q
    | || | |||||| |||||||||| ||| ||||||||||||||    
T  11437147 cttcccttccccttctaaaccctcaatccaaaaacaccctaaa 11437189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 13634783 - 13634711
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    |||||| ||||||||| ||||||||| ||||| |||| | ||||||||||||||||| ||| ||| |||||||    
T  13634783 gtccgttatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 13634711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 26414965 - 26414893
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    |||||||||||||||| ||||||||| ||||| |||| | || |||||||||||||| ||| ||| |||||||    
T  26414965 gtccgtaatttaaaaacgaaaagtaaaccctcccctcccttctcctcctaaaccctcaatccaaacacaccct 26414893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 14245217 - 14245292
Alignment:
Q  127 tgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    ||||||||||||||||| |||||  || ||||| |||| | ||||||||||||||||| ||| ||| |||||||||    
T  14245217 tgtccgtaatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 14245292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 11437017 - 11436955
Alignment:
Q  122 tataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctc 184  Q
    |||| ||||||||||||||||| | |||||||||||||  ||| | |||||||||||||||||    
T  11437017 tatattgtccgtaatttaaaaaaggaaagtaagccctcctctcccttcccctcctaaaccctc 11436955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 153
Target Start/End: Complemental strand, 28279611 - 28279523
Alignment:
Q  64 ttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaa 153  Q
    |||||||||||||||||||||| |||| |||  ||  | || ||| |||||| ||||| ||||||||| ||||||||||| |||||||||    
T  28279611 ttgaagtattatatgatcattt-atcatgttaatatgttaactttttaaaaaacatttcataatgtccataatttaaaaatgaaaagtaa 28279523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 7544208 - 7544136
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    |||||||||||||||| ||||| | ||||||| |||| | |||| |||||||||||| ||| ||| |||||||    
T  7544208 gtccgtaatttaaaaaagaaaatttagccctcccctcccttcccttcctaaaccctcaatccaaacacaccct 7544136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 10204644 - 10204576
Alignment:
Q  132 gtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    ||||||||||||  |||||| ||||||| |||| | ||||||||||||||||| ||| ||| |||||||    
T  10204644 gtaatttaaaaaataaaagtgagccctcacctcccttcccctcctaaaccctcgatccaaacacaccct 10204576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 10476203 - 10476275
Alignment:
Q  131 cgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaa 203  Q
    |||||||||||||  | |||||| | ||| |||| | ||||||||||||||||||||| ||| ||||||||||    
T  10476203 cgtaatttaaaaattataagtaaacactcccctcccttcccctcctaaaccctccatccaaacacaccctaaa 10476275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 208
Target Start/End: Complemental strand, 11419280 - 11419184
Alignment:
Q  112 aaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaattata 208  Q
    |||| ||||||||| ||||| |||||| |||| ||||||||| | |||  ||||| |||| || ||||||||||||  ||| ||||||| |||||||    
T  11419280 aaaaacattttatattgtccttaatttgaaaatgaaaagtaaactctcctctctcttcccttcataaaccctccatgtaaacacacccttaattata 11419184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 197
Target Start/End: Original strand, 11757074 - 11757144
Alignment:
Q  127 tgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacac 197  Q
    ||||||||||||||||| ||||  ||| ||||| |||| | ||||||| ||||||||||||| ||| ||||    
T  11757074 tgtccgtaatttaaaaatgaaatctaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 11757144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 16938551 - 16938477
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    |||||||| ||||||| |||||  || ||||| |||| | ||||||||||||||||| ||| ||| |||||||||    
T  16938551 gtccgtaacttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaa 16938477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 16938633 - 16938723
Alignment:
Q  110 taaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    |||||| ||||| ||| |||| |||||||||||| ||||  ||| ||||| ||||   ||| ||||||||||||||||| ||| |||||||    
T  16938633 taaaaaacatttcatagtgtcagtaatttaaaaatgaaatctaaaccctcccctccattcctctcctaaaccctccatccaaacacaccct 16938723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 4373738 - 4373814
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaat 204  Q
    |||||||||||||||| |||||||||  ||||  || |  |||| |||||||||||| ||| ||| |||||||||||    
T  4373738 gtccgtaatttaaaaaagaaaagtaaatcctccactattttcccttcctaaaccctcaatccaaacacaccctaaat 4373814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 5688521 - 5688572
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaa 115  Q
    ||||||||||||||| |||||   |||| ||||||||||||||||||||||||    
T  5688521 tttgaagtattatatcatcatca-atcatgttgttaattcaattttctaaaaa 5688572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 10476090 - 10476042
Alignment:
Q  136 tttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctc 184  Q
    |||||||| ||||||||| ||||||| || | |||||||||||||||||    
T  10476090 tttaaaaaagaaaagtaaaccctctcatcccttcccctcctaaaccctc 10476042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 173
Target Start/End: Original strand, 28279654 - 28279694
Alignment:
Q  133 taatttaaaaaggaaaagtaagccctctcctctcatcccct 173  Q
    ||||||||||||||||||||| |||||||||| | ||||||    
T  28279654 taatttaaaaaggaaaagtaaaccctctcctcccttcccct 28279694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 67 - 161
Target Start/End: Complemental strand, 1529 - 1436
Alignment:
Q  67 aagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctc 161  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| | |||||||| |||||||||| ||||||    
T  1529 aagtattatatgatcattt-atcaagttgttaattcaattttctaaaaatcattctataatgtccgcagtttaaaaaagaaaagtaagtcctctc 1436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 1244 - 1175
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacac 197  Q
    |||||||||||||||| ||||||||| | ||| |||||| ||||||||||||||||| ||| ||| ||||    
T  1244 gtccgtaatttaaaaaagaaaagtaaactctcccctctcttcccctcctaaaccctcaatccaaacacac 1175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 242324 - 242461
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    |||||| |||||||| ||||||| |||| || |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||| ||    
T  242324 tttgaattattatatcatcattt-atcatgtcgttaattcaattttttaaaaatcattttataatgtccgtaatttaaaaaagaaaagtaaaccctcccc 242422  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacacccta 201  Q
    || | ||||||  |||||| |||||| ||| ||| ||||    
T  242423 tcccttccccttataaaccatccatccaaacacagccta 242461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 63 - 188
Target Start/End: Original strand, 184715 - 184839
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    |||||||||||||||||| || | |||| |||||||||||||||||  ||||||||||||||||||||| ||||||||||| ||| ||||| ||||| |     
T  184715 tttgaagtattatatgataatat-atcatgttgttaattcaattttaaaaaaatcattttataatgtccataatttaaaaaagaatagtaaaccctccct 184813  T
Q  163 tctcatcccctcctaaaccctccatc 188  Q
    || | | |||||||||||||||||||    
T  184814 tccctttccctcctaaaccctccatc 184839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 7e-27; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 63 - 184
Target Start/End: Complemental strand, 34176707 - 34176587
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    |||||| |||||||||||||||| || |  |||||||||||||||| ||||||||| |||||||| | ||||||||||||| |||||||||| | || ||    
T  34176707 tttgaaatattatatgatcattt-attatattgttaattcaattttttaaaaatcaatttataattttcgtaatttaaaaaagaaaagtaagtcttcccc 34176609  T
Q  163 tctcatcccctcctaaaccctc 184  Q
    || |||||||||||||||||||    
T  34176608 tcccatcccctcctaaaccctc 34176587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 74 - 202
Target Start/End: Complemental strand, 9051659 - 9051532
Alignment:
Q  74 atatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccct 173  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||| || |||||||   | ||||    
T  9051659 atatgatcattt-atcatgttgttaattcaattttctaaaaatcattttataatatccgtaatttaaaaaaaaaaagtaaaccatctcctccatttccct 9051561  T
Q  174 cctaaaccctccatcgaaaaacaccctaa 202  Q
    |||||| |||| ||| |||  ||||||||    
T  9051560 cctaaatcctcaatccaaacgcaccctaa 9051532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 193
Target Start/End: Original strand, 10293356 - 10293485
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    |||||||||||||||||| |||| || | ||||| |||||| ||||||||||||||||||||||| || ||||||| |||| ||||||||||| ||| ||    
T  10293356 tttgaagtattatatgattattt-atgatgttgtcaattcagttttctaaaaatcattttataatatctgtaatttgaaaaagaaaagtaagctctcccc 10293454  T
Q  163 tctcatcccctcctaaaccctccatcgaaaa 193  Q
    || | || ||||||||||||| |||| ||||    
T  10293455 tcccttctcctcctaaacccttcatccaaaa 10293485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 197
Target Start/End: Original strand, 26318413 - 26318546
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    |||||||||||||||||||| || |||| ||||||||||||||||||||||| |||||||||||  ||| ||||||||||| |||||||||  | || ||    
T  26318413 tttgaagtattatatgatcaatt-atcatgttgttaattcaattttctaaaagtcattttataaaatccataatttaaaaaagaaaagtaaatcttcccc 26318511  T
Q  163 tctcatcccctcctaaaccctccatcgaaaaacac 197  Q
    || | | ||||||||||| ||||||| ||| ||||    
T  26318512 tccctttccctcctaaactctccatccaaacacac 26318546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 153
Target Start/End: Original strand, 31799029 - 31799118
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaa 153  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||  |||||| |||||||||| ||||||||||||||| |||||||||    
T  31799029 tttgaagtattatatgatcattt-atcatgttgttaattcaatttttaaaaaattattttataatatccgtaatttaaaaaagaaaagtaa 31799118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 3841193 - 3841330
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaa--atcattttataatgtccgtaatttaaaaaggaaaagtaagccctct 160  Q
    ||||||||||||||| ||||||| ||||  |||||||||||||||| |||||  ||||||||||||||||||||||||||||| |||||||||| | ||     
T  3841193 tttgaagtattatatcatcattt-atcat-ttgttaattcaattttgtaaaaaaatcattttataatgtccgtaatttaaaaaagaaaagtaagtcttcc 3841290  T
Q  161 cctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
      | || |||||||||||||||| |||| ||| |||||||    
T  3841291 attttcttcccctcctaaacccttcatccaaacacaccct 3841330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 200
Target Start/End: Complemental strand, 4097368 - 4097235
Alignment:
Q  66 gaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctct 165  Q
    |||||||| ||||||||||| |||| ||||||||||||||||||||||||  |||||||||||||||| ||| |||||  |||||||| | |||  ||      
T  4097368 gaagtattgtatgatcattt-atcatgttgttaattcaattttctaaaaaatattttataatgtccgtgattcaaaaaataaaagtaaactctcatcttc 4097270  T
Q  166 catcccctcctaaaccctccatcgaaaaacaccct 200  Q
    | ||||||||||||||||| ||| ||| |||||||    
T  4097269 cttcccctcctaaaccctcaatccaaacacaccct 4097235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 137
Target Start/End: Original strand, 15353471 - 15353544
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatt 137  Q
    ||||| ||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||    
T  15353471 tttgatgtattatatgatcattt-ataatgttgttaattcaattttctaaaaatcattttataatgtccgtaatt 15353544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 180
Target Start/End: Complemental strand, 25468535 - 25468420
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||| ||||||| |||| |||||||| | |||||||| ||||| |||||||||||||| ||||||||||| |||||||||  |||| ||    
T  25468535 tttgaagtattatataatcattt-atcacgttgttaaattaattttcttaaaattattttataatgtccataatttaaaaaagaaaagtaaaacctc-cc 25468438  T
Q  163 tctcatcccctcctaaac 180  Q
    |||| | |||||||||||    
T  25468437 tctctttccctcctaaac 25468420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 15323339 - 15323406
Alignment:
Q  69 gtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatt 137  Q
    |||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15323339 gtattatatgatcatttg-tcatgttgttaattcaattttctaaaaatcattttataatgtccgtaatt 15323406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 131
Target Start/End: Complemental strand, 15373735 - 15373668
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtcc 131  Q
    ||||| |||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||    
T  15373735 tttgatgtattatatgatcatttg-tcatgttgttaattcaattttctaaaaatcattttataatgtcc 15373668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 194
Target Start/End: Original strand, 23091121 - 23091197
Alignment:
Q  119 ttttataatgtccgtaatttaaaaag-gaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaa 194  Q
    ||||||||| |||||||||||||||  ||||||||||||||| |||| | ||||||||||||||||||||| |||||    
T  23091121 ttttataatatccgtaatttaaaaaaagaaaagtaagccctcccctcccttcccctcctaaaccctccatccaaaaa 23091197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 64 - 199
Target Start/End: Original strand, 10818325 - 10818459
Alignment:
Q  64 ttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcct 163  Q
    |||||||||||||||||||||| |||| |||  ||  | ||| || |||||| ||||| ||| ||||||||||||||||| ||||||||| ||||| |||    
T  10818325 ttgaagtattatatgatcattt-atcatgttaatatgttaatattttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctcccct 10818423  T
Q  164 ctcatcccctcctaaaccctccatcgaaaaacaccc 199  Q
    | |  |||||||||||| ||| ||| ||| ||||||    
T  10818424 ccctacccctcctaaactctcaatccaaacacaccc 10818459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 203
Target Start/End: Complemental strand, 15353458 - 15353361
Alignment:
Q  106 tttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaa 203  Q
    |||| ||||| ||||||| | ||| |||||||||||||  |||||| ||| |||||||| | ||||||||||||||||| ||| ||| ||||||||||    
T  15353458 tttcaaaaaaacattttacattgttcgtaatttaaaaaataaaagtgagcgctctcctcccttcccctcctaaaccctcaatccaaacacaccctaaa 15353361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 19278133 - 19278046
Alignment:
Q  101 tcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatc 188  Q
    |||| ||| ||||||  |||||||| |||| |||||||||||| ||||||||| | |||||||  | |||||||||||||||||||||    
T  19278133 tcaactttttaaaaaatattttatagtgtcagtaatttaaaaatgaaaagtaaactctctccttccttcccctcctaaaccctccatc 19278046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 15323307 - 15323222
Alignment:
Q  118 attttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaa 203  Q
    |||||| | ||| |||||||||||||  |||||| ||| |||||||| | ||||||||||||||||| ||| ||| ||||||||||    
T  15323307 attttacattgttcgtaatttaaaaaataaaagtgagcgctctcctcccttcccctcctaaaccctcaatccaaacacaccctaaa 15323222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 200
Target Start/End: Complemental strand, 9721228 - 9721138
Alignment:
Q  110 taaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    |||||| ||||  ||| ||||||||||||||||| ||||| ||| ||||| |||| | |||||||||||||| || ||| ||| |||||||    
T  9721228 taaaaaacattccatagtgtccgtaatttaaaaatgaaaaataaaccctcccctcccttcccctcctaaaccttcaatccaaacacaccct 9721138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 12811157 - 12811226
Alignment:
Q  133 taatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    ||||||||| | ||||||||| ||||| |||||| |||| |||||||||||| ||| ||| |||||||||    
T  12811157 taatttaaagaagaaaagtaatccctcccctctcttcccatcctaaaccctcaatccaaacacaccctaa 12811226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 14515545 - 14515473
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    |||||||||||||||| |||||  || ||||| |||| | ||||||||||||||||| ||| ||| |||||||    
T  14515545 gtccgtaatttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 14515473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 28477126 - 28477182
Alignment:
Q  93 ttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaa 149  Q
    ||||||||| | |||||||| ||| ||||||||||||| |||||||||||| |||||    
T  28477126 ttgttaatttatttttctaagaattattttataatgtctgtaatttaaaaaagaaaa 28477182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 29693023 - 29693079
Alignment:
Q  93 ttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaa 149  Q
    ||||||||| | |||||||| ||| ||||||||||||| |||||||||||| |||||    
T  29693023 ttgttaatttatttttctaagaattattttataatgtctgtaatttaaaaaagaaaa 29693079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 30487373 - 30487301
Alignment:
Q  133 taatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaatt 205  Q
    |||||||| || ||||||| | ||||| |||| | ||||||||||||||||||||| ||| ||||||| ||||    
T  30487373 taatttaacaatgaaaagtgaaccctcccctcccttcccctcctaaaccctccatccaaacacacccttaatt 30487301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 197
Target Start/End: Complemental strand, 9719121 - 9719034
Alignment:
Q  110 taaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacac 197  Q
    |||||| ||||  ||| ||||||||||||||||| ||||| |||  |||| |||| | ||||||||||||||||| ||| ||| ||||    
T  9719121 taaaaaacattccatagtgtccgtaatttaaaaatgaaaaataaatcctcccctcccttcccctcctaaaccctcaatccaaacacac 9719034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 10818308 - 10818229
Alignment:
Q  121 ttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    ||||| ||||||||||||||||| ||||| ||| |  || |||| | ||||||||||||||||| ||| ||| |||||||    
T  10818308 ttatattgtccgtaatttaaaaaagaaaaataaacaatcccctcccttcccctcctaaaccctcaatccaaacacaccct 10818229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 203
Target Start/End: Original strand, 1390481 - 1390566
Alignment:
Q  118 attttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaa 203  Q
    |||| ||| |||| |||||||||||| |||||||||  || ||||||   |||||||||||||||| |||| ||| ||||| ||||    
T  1390481 atttcatagtgtcagtaatttaaaaatgaaaagtaaaacccctcctccattcccctcctaaacccttcatccaaacacaccttaaa 1390566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 202
Target Start/End: Original strand, 4097678 - 4097759
Alignment:
Q  121 ttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    ||||| ||||||||||||||||| ||||||| | ||||  |||| | ||||||| ||||||||| ||| ||| |||| ||||    
T  4097678 ttatattgtccgtaatttaaaaaagaaaagtgaacccttccctcccttcccctcttaaaccctcaatccaaacacactctaa 4097759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 9298641 - 9298694
Alignment:
Q  111 aaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctc 164  Q
    ||||| ||||| ||||||||||||||||||||  ||||||||| ||||| ||||    
T  9298641 aaaaaacatttcataatgtccgtaatttaaaattgaaaagtaaaccctcccctc 9298694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 31849257 - 31849318
Alignment:
Q  103 aattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctc 164  Q
    |||||| |||||  ||||||||| ||||||||||||||||| ||||||| | ||||| ||||    
T  31849257 aattttttaaaagacattttatagtgtccgtaatttaaaaatgaaaagtgaaccctcccctc 31849318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 14515633 - 14515717
Alignment:
Q  118 attttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaa 202  Q
    |||||||| ||| | ||||||||||| ||||  ||| ||||| | |  | ||||||||||||||||||||| ||| |||||||||    
T  14515633 attttatagtgttcataatttaaaaatgaaatctaaaccctccctttccttcccctcctaaaccctccatccaaacacaccctaa 14515717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 199
Target Start/End: Complemental strand, 16738085 - 16737997
Alignment:
Q  111 aaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccc 199  Q
    ||||| ||||| ||| | ||| ||||||||||| |||||||||  | || |||||| ||| ||| ||||||||||||| ||| ||||||    
T  16738085 aaaaaacatttcatagtttccataatttaaaaacgaaaagtaaatcttcccctctcttcctctcttaaaccctccatccaaacacaccc 16737997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 34176497 - 34176584
Alignment:
Q  118 attttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccctaaatta 206  Q
    |||| ||| ||||||||||||||||| ||||| ||| | |||  ||||| |||| || ||||||||||||| ||| ||||| |||||||    
T  34176497 atttcatagtgtccgtaatttaaaaatgaaaactaaactctcatctctcttccc-tcataaaccctccatccaaacacaccataaatta 34176584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 62 - 200
Target Start/End: Original strand, 17647 - 17782
Alignment:
Q  62 atttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctc 161  Q
    ||||||||||||||||||| |||| |||| |||| ||||||||||||| ||||||||||||||||| |  |||||||||||| ||||||||| ||  | |    
T  17647 atttgaagtattatatgattattt-atcatgttgctaattcaattttcaaaaaatcattttataatatttgtaatttaaaaaagaaaagtaaacc--ccc 17743  T
Q  162 ctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    ||| | ||| ||||||||||||||||| ||| |||||||    
T  17744 ctcccttccactcctaaaccctccatccaaacacaccct 17782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 52993 - 53081
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagta 152  Q
    |||||| |||||||||||||||| |||| ||||||| |||||||||| ||||||||||| |||||| || ||||||||||| ||||||||    
T  52993 tttgaaatattatatgatcattt-atcatgttgttagttcaattttcaaaaaatcatttcataatgcccataatttaaaaaagaaaagta 53081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 203
Target Start/End: Complemental strand, 39320 - 39183
Alignment:
Q  66 gaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctct 165  Q
    |||||||||||||||||||| |||| |||  ||  | || ||| |||||| ||||| ||| ||||||||||||||||| ||||||||| ||||| || ||    
T  39320 gaagtattatatgatcattt-atcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctc-cccct 39223  T
Q  166 ca--tcccctcctaaaccctccatcgaaaaacaccctaaa 203  Q
    ||  ||||||||||||||||||||| ||| ||||||||||    
T  39222 catttcccctcctaaaccctccatccaaacacaccctaaa 39183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 39362 - 39434
Alignment:
Q  128 gtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacaccct 200  Q
    |||||||||||||||| ||||||||| ||||| |||| | | |||| |||||||||| ||| ||| |||||||    
T  39362 gtccgtaatttaaaaaagaaaagtaaaccctcccctccctttcccttctaaaccctcaatccaaacacaccct 39434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 164
Target Start/End: Original strand, 8255 - 8355
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcc 162  Q
    ||||||||||||||||||||||  |||| ||||||||||||||||| ||||||| ||||||||| |||  ||| ||||||| | || |||||||||| ||    
T  8255 tttgaagtattatatgatcatta-atcatgttgttaattcaattttttaaaaataattttataacgtctttaaattaaaaaaggaatgtaagccctcccc 8353  T
Q  163 tc 164  Q
    ||    
T  8354 tc 8355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 150
Target Start/End: Original strand, 37491 - 37577
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaggaaaag 150  Q
    |||||||| ||||||||||| || |||| |||||||||| | ||||||||||||||| ||||| |||| |||||||||||| ||||||    
T  37491 tttgaagtgttatatgatcactt-atcatgttgttaattaagttttctaaaaatcatcttatattgtctgtaatttaaaaaagaaaag 37577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 192
Target Start/End: Original strand, 16104 - 16186
Alignment:
Q  110 taaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaa 192  Q
    |||||| ||||| ||||| ||||||||||||||| ||||| ||| | || ||||| | |||||||||||| |||| |||||||    
T  16104 taaaaaacatttcataatatccgtaatttaaaaatgaaaaataaactctttcctcccttcccctcctaaatcctctatcgaaa 16186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 16039 - 15966
Alignment:
Q  111 aaaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctc 184  Q
    ||||| ||| |||||  ||| |||||||||||| ||||||||| | ||||| |||| | |||||||||||||||    
T  16039 aaaaaacatgttatatagtctgtaatttaaaaaagaaaagtaaactctctcatctcgttccctcctaaaccctc 15966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1414 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1414
Description:

Target: scaffold1414; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 409 - 473
Alignment:
Q  63 tttgaagtattatatgatcattttatcaagttgttaattc-aattttctaaaaatcattttataat 127  Q
    ||||||||||| ||| ||||||| |||| | ||||||||  |||||||||||||||||||||||||    
T  409 tttgaagtattttattatcattt-atcatgctgttaattttaattttctaaaaatcattttataat 473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 197
Target Start/End: Complemental strand, 3235 - 3150
Alignment:
Q  112 aaaatcattttataatgtccgtaatttaaaaaggaaaagtaagccctctcctctcatcccctcctaaaccctccatcgaaaaacac 197  Q
    |||| ||||| ||| |||| |||||||||||| ||||||||| | ||| |||| | ||||||||||||| ||| ||| ||| ||||    
T  3235 aaaaacatttcatagtgtctgtaatttaaaaaagaaaagtaaactctcccctcccttcccctcctaaactctcaatccaaacacac 3150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University