View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18842_low_10 (Length: 275)

Name: NF18842_low_10
Description: NF18842
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18842_low_10
NF18842_low_10
[»] chr4 (28 HSPs)
chr4 (9-260)||(10047083-10047335)
chr4 (9-155)||(25862163-25862309)
chr4 (9-154)||(54866993-54867140)
chr4 (9-138)||(16624150-16624279)
chr4 (9-153)||(39245805-39245950)
chr4 (9-154)||(3796661-3796808)
chr4 (9-154)||(5269332-5269481)
chr4 (22-154)||(24333621-24333755)
chr4 (9-154)||(42599715-42599863)
chr4 (9-138)||(16630821-16630950)
chr4 (9-138)||(38152579-38152710)
chr4 (17-138)||(5147504-5147625)
chr4 (52-154)||(6743604-6743706)
chr4 (17-138)||(5143086-5143207)
chr4 (11-120)||(5396815-5396926)
chr4 (17-151)||(1983447-1983581)
chr4 (9-98)||(3777417-3777506)
chr4 (11-138)||(8689627-8689748)
chr4 (16-154)||(28468676-28468813)
chr4 (51-154)||(31985815-31985919)
chr4 (51-123)||(36315393-36315467)
chr4 (51-123)||(36329602-36329676)
chr4 (54-154)||(34496009-34496108)
chr4 (84-154)||(5112052-5112121)
chr4 (52-134)||(29760470-29760554)
chr4 (54-120)||(18377216-18377282)
chr4 (105-138)||(5397069-5397102)
chr4 (51-134)||(24741769-24741853)
[»] chr6 (18 HSPs)
chr6 (7-157)||(5572735-5572885)
chr6 (9-154)||(18232655-18232801)
chr6 (9-154)||(10077306-10077451)
chr6 (9-154)||(31979324-31979469)
chr6 (17-161)||(31086611-31086756)
chr6 (9-138)||(5017609-5017742)
chr6 (17-154)||(21801498-21801634)
chr6 (9-114)||(22963550-22963656)
chr6 (9-114)||(23824737-23824843)
chr6 (11-136)||(5757621-5757744)
chr6 (16-136)||(21355867-21355985)
chr6 (57-161)||(24436155-24436259)
chr6 (11-138)||(31936414-31936541)
chr6 (9-154)||(4629772-4629909)
chr6 (16-120)||(22708863-22708967)
chr6 (51-120)||(26258182-26258252)
chr6 (84-122)||(27165545-27165583)
chr6 (9-61)||(31077082-31077134)
[»] chr8 (22 HSPs)
chr8 (9-156)||(9765961-9766108)
chr8 (10-141)||(5702625-5702756)
chr8 (9-152)||(26403371-26403515)
chr8 (9-154)||(6127029-6127176)
chr8 (17-147)||(4696745-4696882)
chr8 (11-138)||(4455855-4455981)
chr8 (9-138)||(19752535-19752665)
chr8 (28-154)||(23799737-23799863)
chr8 (11-138)||(19175898-19176027)
chr8 (16-154)||(5990709-5990843)
chr8 (16-154)||(26287713-26287850)
chr8 (16-154)||(26312964-26313101)
chr8 (16-154)||(31071378-31071516)
chr8 (63-136)||(7412166-7412239)
chr8 (17-154)||(7493210-7493352)
chr8 (15-134)||(1262100-1262217)
chr8 (9-154)||(6813489-6813638)
chr8 (99-154)||(28307368-28307422)
chr8 (75-151)||(9055043-9055117)
chr8 (51-154)||(26300958-26301062)
chr8 (51-134)||(36979205-36979290)
chr8 (51-134)||(30655469-30655553)
[»] chr5 (25 HSPs)
chr5 (9-154)||(19588557-19588702)
chr5 (9-160)||(42127551-42127701)
chr5 (9-154)||(28832071-28832215)
chr5 (11-138)||(14520056-14520183)
chr5 (9-154)||(11181973-11182120)
chr5 (9-152)||(17004101-17004244)
chr5 (9-154)||(3880113-3880256)
chr5 (9-110)||(24553647-24553748)
chr5 (16-136)||(9353480-9353599)
chr5 (11-154)||(15464343-15464485)
chr5 (11-138)||(11917115-11917245)
chr5 (16-158)||(31300744-31300886)
chr5 (11-154)||(36932493-36932635)
chr5 (86-154)||(42126625-42126693)
chr5 (18-120)||(38192017-38192118)
chr5 (18-120)||(38219242-38219343)
chr5 (100-154)||(10281673-10281727)
chr5 (9-68)||(12084317-12084376)
chr5 (100-154)||(6741665-6741718)
chr5 (51-120)||(35387508-35387578)
chr5 (110-154)||(24555833-24555877)
chr5 (110-154)||(24596864-24596908)
chr5 (9-156)||(33031083-33031233)
chr5 (101-138)||(213790-213827)
chr5 (54-154)||(28537430-28537530)
[»] chr2 (30 HSPs)
chr2 (9-154)||(20522031-20522176)
chr2 (9-157)||(8039867-8040016)
chr2 (9-154)||(33528762-33528907)
chr2 (9-155)||(34682475-34682622)
chr2 (9-159)||(17865009-17865159)
chr2 (17-154)||(21629762-21629897)
chr2 (9-154)||(10445585-10445732)
chr2 (9-123)||(31055884-31055998)
chr2 (9-154)||(16940350-16940496)
chr2 (9-154)||(17011015-17011161)
chr2 (11-138)||(42039813-42039939)
chr2 (9-138)||(23078612-23078742)
chr2 (16-138)||(34388686-34388808)
chr2 (9-127)||(33117974-33118092)
chr2 (9-154)||(14699135-14699285)
chr2 (9-138)||(10707392-10707523)
chr2 (9-161)||(13569130-13569285)
chr2 (11-138)||(36757906-36758031)
chr2 (11-154)||(39482746-39482885)
chr2 (9-154)||(8390290-8390441)
chr2 (51-136)||(28259360-28259445)
chr2 (16-154)||(3491563-3491700)
chr2 (54-149)||(40014744-40014837)
chr2 (18-120)||(25398339-25398440)
chr2 (18-120)||(25403477-25403578)
chr2 (100-155)||(32178403-32178459)
chr2 (16-154)||(27149012-27149150)
chr2 (9-154)||(35397325-35397467)
chr2 (51-134)||(11099111-11099196)
chr2 (54-117)||(40738688-40738752)
[»] chr1 (27 HSPs)
chr1 (9-154)||(775483-775628)
chr1 (9-154)||(47098965-47099111)
chr1 (9-154)||(29651620-29651767)
chr1 (9-154)||(40816873-40817020)
chr1 (9-154)||(19072737-19072883)
chr1 (9-154)||(19120627-19120773)
chr1 (9-154)||(47102982-47103127)
chr1 (17-150)||(16124666-16124799)
chr1 (16-138)||(47704084-47704208)
chr1 (9-152)||(27104513-27104653)
chr1 (9-154)||(13598206-13598354)
chr1 (16-138)||(21536718-21536839)
chr1 (11-137)||(26645041-26645166)
chr1 (11-138)||(3281537-3281661)
chr1 (9-154)||(9023973-9024116)
chr1 (52-154)||(9476073-9476176)
chr1 (11-136)||(37069597-37069723)
chr1 (11-138)||(32889266-32889392)
chr1 (57-154)||(13604812-13604909)
chr1 (51-120)||(19359028-19359098)
chr1 (84-154)||(50521319-50521389)
chr1 (51-120)||(19361618-19361688)
chr1 (51-120)||(19380258-19380328)
chr1 (54-120)||(22819270-22819336)
chr1 (110-154)||(47704222-47704266)
chr1 (52-134)||(24202950-24203033)
chr1 (84-154)||(17345735-17345805)
[»] chr7 (26 HSPs)
chr7 (9-154)||(49091472-49091618)
chr7 (9-154)||(29159613-29159759)
chr7 (9-154)||(20283900-20284045)
chr7 (9-154)||(46516451-46516597)
chr7 (9-154)||(23403154-23403299)
chr7 (9-154)||(9235696-9235843)
chr7 (9-151)||(4796808-4796953)
chr7 (9-152)||(33332591-33332734)
chr7 (11-154)||(9190151-9190294)
chr7 (11-154)||(9185306-9185449)
chr7 (19-138)||(35960641-35960762)
chr7 (11-136)||(47263509-47263632)
chr7 (16-136)||(2479168-2479286)
chr7 (11-154)||(2580199-2580341)
chr7 (52-140)||(55764-55852)
chr7 (9-120)||(2647837-2647949)
chr7 (53-138)||(21983109-21983194)
chr7 (54-154)||(3047063-3047162)
chr7 (53-138)||(21988733-21988818)
chr7 (103-154)||(2647962-2648013)
chr7 (51-136)||(44848868-44848953)
chr7 (16-154)||(18413453-18413590)
chr7 (17-154)||(18408576-18408712)
chr7 (15-120)||(21639654-21639758)
chr7 (15-120)||(21645852-21645956)
chr7 (84-154)||(28617444-28617512)
[»] chr3 (35 HSPs)
chr3 (9-154)||(48438025-48438170)
chr3 (11-138)||(36028932-36029059)
chr3 (9-154)||(3716133-3716279)
chr3 (9-138)||(27026772-27026901)
chr3 (9-154)||(40844464-40844608)
chr3 (9-154)||(40592914-40593063)
chr3 (9-154)||(27038100-27038246)
chr3 (9-138)||(30709922-30710051)
chr3 (9-154)||(24695295-24695439)
chr3 (16-154)||(47924010-47924146)
chr3 (9-154)||(6794844-6794988)
chr3 (9-138)||(8370618-8370747)
chr3 (9-154)||(26298792-26298944)
chr3 (9-141)||(1417621-1417752)
chr3 (51-154)||(47649551-47649655)
chr3 (17-140)||(16264174-16264297)
chr3 (9-155)||(1417075-1417221)
chr3 (9-138)||(35925309-35925438)
chr3 (18-154)||(8126512-8126648)
chr3 (67-154)||(3323752-3323839)
chr3 (56-154)||(18554465-18554563)
chr3 (9-154)||(37466102-37466247)
chr3 (11-156)||(39040126-39040271)
chr3 (16-156)||(27986584-27986722)
chr3 (51-127)||(21711064-21711137)
chr3 (16-154)||(32143133-32143270)
chr3 (11-154)||(33386800-33386942)
chr3 (16-154)||(1305761-1305898)
chr3 (9-80)||(3328487-3328558)
chr3 (16-152)||(1309668-1309803)
chr3 (90-155)||(25929635-25929700)
chr3 (54-154)||(27452770-27452870)
chr3 (11-120)||(27975085-27975191)
chr3 (84-155)||(4387239-4387308)
chr3 (114-154)||(3328561-3328601)
[»] scaffold0006 (3 HSPs)
scaffold0006 (9-140)||(2317-2448)
scaffold0006 (9-154)||(5491-5639)
scaffold0006 (57-154)||(133469-133566)
[»] scaffold0176 (1 HSPs)
scaffold0176 (10-154)||(17077-17218)
[»] scaffold0148 (1 HSPs)
scaffold0148 (9-157)||(10535-10685)
[»] scaffold0087 (2 HSPs)
scaffold0087 (11-136)||(44104-44227)
scaffold0087 (11-138)||(36976-37102)
[»] scaffold0036 (1 HSPs)
scaffold0036 (11-138)||(85512-85638)
[»] scaffold0098 (1 HSPs)
scaffold0098 (17-120)||(45100-45201)
[»] scaffold1805 (1 HSPs)
scaffold1805 (51-138)||(1234-1322)
[»] scaffold0188 (2 HSPs)
scaffold0188 (51-120)||(18134-18204)
scaffold0188 (51-120)||(24227-24297)
[»] scaffold0140 (1 HSPs)
scaffold0140 (11-118)||(8563-8670)
[»] scaffold0184 (1 HSPs)
scaffold0184 (54-154)||(29676-29777)
[»] scaffold0078 (1 HSPs)
scaffold0078 (54-154)||(43067-43168)


Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 9 - 260
Target Start/End: Complemental strand, 10047335 - 10047083
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||    
T  10047335 gattatgcttgtggtgttgctctacacttagatctatgtctatttttgttgttattgcttggagacactttatccattgattaccacttcctttgctcca 10047236  T
Q  109 cacatctttgttattcattgttgtgattttgtctgaattcacaacacaa-ccaagtgggttggtcagagtaattaacttagaaaagaactatccattatt 207  Q
    ||||| |||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10047235 cacatttttgttattcattggtgtgattttgtccgaattcacaacacaatccaagtgggttggtcagagtaattaacttagaaaagaactatccattatt 10047136  T
Q  208 tatttaatttggtgagaataattaaaagaaaatctaaaattgaggttgattat 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10047135 tatttaatttggtgagaataattaaaagaaaatctaaaattgaggttgattat 10047083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 155
Target Start/End: Original strand, 25862163 - 25862309
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||||||||||||||||||||||| ||  ||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  25862163 gattatgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgttgcttggagacactttatctattgattaccacttcctttgctcca 25862262  T
Q  109 cacatctttgttattcattgttgtgattttgtctgaattcacaacac 155  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  25862263 cacatctttgttattcattggtgtgattttgtccgaattcacaacac 25862309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 54867140 - 54866993
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctattttt--gttgttgttgcttggagacactttatcaattgattaccacttcatttgctc 106  Q
    |||||| |||||||||||||||||||||||||||||  ||| |||||  ||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  54867140 gattatgcttgtggtgttgctctacacttagatctatgtctgtttttttgttgttgttgcttggagacactttatctattgattaccacttcctttgctc 54867041  T
Q  107 cacacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  54867040 cacacatctttgttattcattggtgtgattttgtctgaattcacaaca 54866993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 16624150 - 16624279
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||||||||||||||||||||||||||| |||||  ||| ||||||||||||||||||||||||||||||   |||||||| |||||| |||||||||    
T  16624150 gattattcttgtggtgttgctctacacttaaatctaggtctgtttttgttgttgttgcttggagacactttacacattgattatcacttcctttgctcca 16624249  T
Q  109 cacatctttgttattcattgttgtgatttt 138  Q
    |||||||||||||||||||| |||||||||    
T  16624250 cacatctttgttattcattggtgtgatttt 16624279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 153
Target Start/End: Complemental strand, 39245950 - 39245805
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctattttt-gttgttgttgcttggagacactttatcaattgattaccacttcatttgctcc 107  Q
    |||||| | |||||||||||||||||||||||| ||  ||| ||||| |||||||||| |||||||||||||||| |||||||||||||||||| |||||    
T  39245950 gattatgcctgtggtgttgctctacacttagatttaggtctgttttttgttgttgttgtttggagacactttatctattgattaccacttcattcgctcc 39245851  T
Q  108 acacatctttgttattcattgttgtgattttgtctgaattcacaac 153  Q
    |||||||||| |||||||||| |||||||||||| |||||||||||    
T  39245850 acacatctttattattcattggtgtgattttgtccgaattcacaac 39245805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 3796661 - 3796808
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactct-atttttgttgttgttgcttggagacactttatcaattgattaccacttcattt-gctc 106  Q
    |||||| |||||| |||| |||||||||||||| ||  ||| ||||||||||||||||||||||||||||||||| |||||||| |||||| ||| ||||    
T  3796661 gattatgcttgtgatgttactctacacttagatttaggtctgatttttgttgttgttgcttggagacactttatctattgattatcacttccttttgctc 3796760  T
Q  107 cacacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||    
T  3796761 cacacatctttgttattcattggtgtgattttgtatgaattcacaaca 3796808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 5269332 - 5269481
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgt---tgttgttgcttggagacactttatcaattgattaccacttcatttgct 105  Q
    |||||| |||||||||||||||||||||||||||||  | |||||||||   ||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  5269332 gattatgcttgtggtgttgctctacacttagatctaggtatatttttgttgttgttgttgcttggagacactttatccattgattaccacttcctttgct 5269431  T
Q  106 ccacacatctttgttattcattgttgtga-ttttgtctgaattcacaaca 154  Q
    |||||||||||||||||| |||  ||| | ||||||| ||||||||||||    
T  5269432 ccacacatctttgttatttattagtgtaatttttgtccgaattcacaaca 5269481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 154
Target Start/End: Complemental strand, 24333755 - 24333621
Alignment:
Q  22 gtgttgctctacacttagatctaactctattttt-gttgttgttgcttggagacactttatcaattgattaccacttcattt-gctccacacatctttgt 119  Q
    |||||||||||||||||||||||  ||| ||||| |||||||||| |||||||||||||||| ||||||||||||||| ||| |||||||||||||||||    
T  24333755 gtgttgctctacacttagatctaggtctgttttttgttgttgttgtttggagacactttatctattgattaccacttccttttgctccacacatctttgt 24333656  T
Q  120 tattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||| |||||||||||  ||||||||||||    
T  24333655 tattcattggtgtgattttgtacgaattcacaaca 24333621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 42599715 - 42599863
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctattt---ttgttgttgttgcttggagacactttatcaattgattaccacttcatttgct 105  Q
    |||||| ||||||||||||||||||| |||||||||  | | |||   ||||||||||||||||||| ||||||||| ||||||||||||||| ||||||    
T  42599715 gattatgcttgtggtgttgctctacatttagatctaggtttgtttgttttgttgttgttgcttggagtcactttatctattgattaccacttcctttgct 42599814  T
Q  106 ccacacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
     ||||||||||| |||||||||  |||||||||||| ||||||||||||    
T  42599815 tcacacatctttattattcattagtgtgattttgtccgaattcacaaca 42599863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 16630821 - 16630950
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||||||||||| ||||||||||||||  | | |||||||||||| |||||||||||||||||   ||||||||||| ||| |||||||||    
T  16630821 gattatgcttgtggtgttgctttacacttagatctaggtttgtttttgttgttgctgcttggagacactttacacattgattaccagttcctttgctcca 16630920  T
Q  109 cacatctttgttattcattgttgtgatttt 138  Q
    |||||||||||||||||||| |||||||||    
T  16630921 cacatctttgttattcattggtgtgatttt 16630950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 38152579 - 38152710
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttt--tgttgttgttgcttggagacactttatcaattgattaccacttcatttgctc 106  Q
    |||||| |||||||||||||| ||||||||||||||  ||| ||||  ||||||||||||||||| |||||| ||  |||||||||||||||||||||||    
T  38152579 gattatgcttgtggtgttgctatacacttagatctaggtctgttttattgttgttgttgcttggaaacacttcatacattgattaccacttcatttgctc 38152678  T
Q  107 cacacatctttgttattcattgttgtgatttt 138  Q
     ||||||||||||||||||||| |||||||||    
T  38152679 tacacatctttgttattcattggtgtgatttt 38152710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 5147625 - 5147504
Alignment:
Q  17 ttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatctt 116  Q
    ||||||||||||||||||||||||| ||  ||| || ||||||||||| |||||||||||||||   ||||||||||||||| ||||||||||||||| |    
T  5147625 ttgtggtgttgctctacacttagatttaggtctgttattgttgttgtttcttggagacactttacacattgattaccacttcctttgctccacacatcat 5147526  T
Q  117 tgttattcattgttgtgatttt 138  Q
    |||||||||||| |||||||||    
T  5147525 tgttattcattggtgtgatttt 5147504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 52 - 154
Target Start/End: Original strand, 6743604 - 6743706
Alignment:
Q  52 ttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatctttgttattcattgttgtgattttgtctgaattcaca 151  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||| ||||||| |||| |||||||||||||||| | |||||||||| |||||||||    
T  6743604 ttttgttgttgttgtttggagacactttatctattgattaccacttcctttgctcgacacttctttgttattcattgctatgattttgtccgaattcaca 6743703  T
Q  152 aca 154  Q
    |||    
T  6743704 aca 6743706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 5143207 - 5143086
Alignment:
Q  17 ttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatctt 116  Q
    ||||||||||| ||||||||||||| ||  ||| ||||||||||||||| ||||||||||||||   ||||||||||||||| ||||||||||||||| |    
T  5143207 ttgtggtgttgttctacacttagatttaggtctgtttttgttgttgttgtttggagacactttacacattgattaccacttcctttgctccacacatcat 5143108  T
Q  117 tgttattcattgttgtgatttt 138  Q
    |||||||||||| | |||||||    
T  5143107 tgttattcattggtttgatttt 5143086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 5396815 - 5396926
Alignment:
Q  11 ttattcttgtggtgttgctctacact---tagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcc 107  Q
    |||| |||||||||||||||||||||   ||| ||||  ||| ||||||||||||||||||||||||||||||   ||||||||||||||| ||||||||    
T  5396815 ttatgcttgtggtgttgctctacactaattag-tctaggtctgtttttgttgttgttgcttggagacactttacacattgattaccacttcctttgctcc 5396913  T
Q  108 acacatctttgtt 120  Q
    |||||||||||||    
T  5396914 acacatctttgtt 5396926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 151
Target Start/End: Original strand, 1983447 - 1983581
Alignment:
Q  17 ttgtggtgttgctctacacttagatctaactctattt-ttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatct 115  Q
    |||||||| |||| ||||||||||| ||| ||  ||| |||||||||||||||| |  ||||||||| ||||||||  ||||| ||||||||||||||||    
T  1983447 ttgtggtgatgctttacacttagatttaagtcagtttgttgttgttgttgcttgaacccactttatccattgattattacttcctttgctccacacatct 1983546  T
Q  116 ttgttattcattgttgtgattttgtctgaattcaca 151  Q
    ||||| ||||||  |||||||||||| |||||||||    
T  1983547 ttgtt-ttcatttgtgtgattttgtccgaattcaca 1983581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 3777506 - 3777417
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttc 98  Q
    |||||| |||||||| ||| ||||||||||||||||  ||| ||||||||||||||||||||||||||||||   |||||||||||||||    
T  3777506 gattatgcttgtggttttgttctacacttagatctaggtctgtttttgttgttgttgcttggagacactttacacattgattaccacttc 3777417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 138
Target Start/End: Original strand, 8689627 - 8689748
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccaca 110  Q
    |||| |||||||||||||||| || | || ||||  ||| |||||||||||||| |||||||||||||||      |||||||||||| ||| |||||||    
T  8689627 ttatgcttgtggtgttgctctgcattaag-tctaggtctgtttttgttgttgttacttggagacactttac-----gattaccacttcctttactccaca 8689720  T
Q  111 catctttgttattcattgttgtgatttt 138  Q
    |||||||||||||||||| |||||||||    
T  8689721 catctttgttattcattggtgtgatttt 8689748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 28468676 - 28468813
Alignment:
Q  16 cttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatc 114  Q
    ||||||||||||||||||||| ||| |||   || ||||||||||||||||||||||||||||||   || ||||||||||| | |||||||||||||||    
T  28468676 cttgtggtgttgctctacact-aga-ctagggctgtttttgttgttgttgcttggagacactttacacatagattaccacttccttttgctccacacatc 28468773  T
Q  115 tttgttattcattgttgtga-ttttgtctgaattcacaaca 154  Q
    |||||| | ||||| ||||| |||| || ||||||||||||    
T  28468774 tttgtt-tacattggtgtgagttttatccgaattcacaaca 28468813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 154
Target Start/End: Original strand, 31985815 - 31985919
Alignment:
Q  51 tttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatctttgttattcattgttgtga-ttttgtctgaattc 148  Q
    ||||||||||||||||||||||||||||||   || ||||||||||| | ||||| ||||||||||||||| | ||||| ||||| ||||||| ||||||    
T  31985815 tttttgttgttgttgcttggagacactttacacatagattaccacttccttttgcaccacacatctttgtt-tacattggtgtgagttttgtccgaattc 31985913  T
Q  149 acaaca 154  Q
    ||||||    
T  31985914 acaaca 31985919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 36315393 - 36315467
Alignment:
Q  51 tttttgttgttgttgcttggagacac--tttatcaattgattaccacttcatttgctccacacatctttgttatt 123  Q
    ||||||||||||||||||||||||||  ||| || ||||||||||||||| ||| |||||||||| |||||||||    
T  36315393 tttttgttgttgttgcttggagacactttttgtccattgattaccacttcctttactccacacatttttgttatt 36315467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 36329602 - 36329676
Alignment:
Q  51 tttttgttgttgttgcttggagacac--tttatcaattgattaccacttcatttgctccacacatctttgttatt 123  Q
    ||||||||||||||||||||||||||  ||| || ||||||||||||||| ||| |||||||||| |||||||||    
T  36329602 tttttgttgttgttgcttggagacactttttgtccattgattaccacttcctttactccacacatttttgttatt 36329676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 154
Target Start/End: Original strand, 34496009 - 34496108
Alignment:
Q  54 ttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatctttgttattcattgttgtgattttgtctgaattcacaac 153  Q
    ||||||||||||||||  |  | ||| || |||||||||| || | ||||||||||||||||||||| ||||||| |||||||||| | |||||||||||    
T  34496009 ttgttgttgttgcttgaggctattttgtccattgattaccgctacctttgctccacacatctttgtt-ttcattggtgtgattttgaccgaattcacaac 34496107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 5112121 - 5112052
Alignment:
Q  84 attgattaccacttcatttgctccacacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||||||| | |||||||||||||| |||||| ||||||| ||||||||| || ||||||||||||    
T  5112121 attgattaccactccctttgctccacacatttttgtt-ttcattggtgtgattttatccgaattcacaaca 5112052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 134
Target Start/End: Complemental strand, 29760554 - 29760470
Alignment:
Q  52 ttttgttgttgttgcttggagac-actttatcaattgattaccact-tcatttgctccacacatctttgttattcattgttgtga 134  Q
    |||||||||||||||||||| || | ||| |  ||||||||||||| ||  |||||||||||||||||||| ||||||| |||||    
T  29760554 ttttgttgttgttgcttggaaaccattttgtttattgattaccactatctcttgctccacacatctttgtttttcattggtgtga 29760470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 120
Target Start/End: Complemental strand, 18377282 - 18377216
Alignment:
Q  54 ttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatctttgtt 120  Q
    ||||||||||||||||  ||||||||||| ||||||||| ||    |||||||||||||| ||||||    
T  18377282 ttgttgttgttgcttgaggacactttatccattgattactacaaactttgctccacacatatttgtt 18377216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 138
Target Start/End: Original strand, 5397069 - 5397102
Alignment:
Q  105 tccacacatctttgttattcattgttgtgatttt 138  Q
    |||||||||||||||||||||||| |||||||||    
T  5397069 tccacacatctttgttattcattggtgtgatttt 5397102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 24741853 - 24741769
Alignment:
Q  51 tttttgttgttgttgcttggaga-cactttatcaattgattaccact-tcatttgctccacacatctttgttattcattgttgtga 134  Q
    ||||||||||||||||||||| | || ||| |  ||||||||||||| ||  |||||||||||||||||||| ||||||| |||||    
T  24741853 tttttgttgttgttgcttggaaaccattttgttcattgattaccactatctcttgctccacacatctttgtt-ttcattggtgtga 24741769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 4e-56; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 7 - 157
Target Start/End: Original strand, 5572735 - 5572885
Alignment:
Q  7 tagattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctc 106  Q
    |||||||| |||||||||||||||||||||||||| ||  ||| |||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  5572735 tagattatgcttgtggtgttgctctacacttagatttatgtctgtttttgctgttgttgcttggagacactttatctattgattaccacttcctttgctc 5572834  T
Q  107 cacacatctttgttattcattgttgtgattttgtctgaattcacaacacaa 157  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  5572835 cacacatctttgttattcattggtgtgattttgtccgaattcacaacacaa 5572885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 18232801 - 18232655
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||||||||||||||||||||||||||  | | |||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||    
T  18232801 gattatgcttgtggtgttgctctacacttagatctaggtttgtttttgttgttgttgcttggagacactttatctattgattaccacttcctttgcttca 18232702  T
Q  109 cacatctttgttattcattgttgtgattttg-tctgaattcacaaca 154  Q
    |||||||||||||||||||| |||||||||| || ||||||||||||    
T  18232701 cacatctttgttattcattggtgtgattttgttccgaattcacaaca 18232655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 10077306 - 10077451
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||||||||||||||||||||||| ||  ||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  10077306 gattatgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgttgcttggagacactttatctattgattaccacttcctttgctcca 10077405  T
Q  109 cacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    |||||||| | ||||||||  |||||||||||| ||||||||||||    
T  10077406 cacatcttcgctattcattagtgtgattttgtccgaattcacaaca 10077451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 31979469 - 31979324
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||| ||||||||||||||||||| ||  ||| ||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||    
T  31979469 gattatgcttgtgatgttgctctacacttagatttaggtctgtttttgttgttgttgcttgaagacactttatctattgattaccacttcctttgctcca 31979370  T
Q  109 cacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||||||||| | || |||||||||||| ||||||||||||    
T  31979369 cacatctttgttatttagtggtgtgattttgtccgaattcacaaca 31979324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 31086611 - 31086756
Alignment:
Q  17 ttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatctt 116  Q
    ||||| ||||||||||||||||||| ||  ||| ||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  31086611 ttgtgatgttgctctacacttagatttatgtctgtttttgttgtttttgcttggagacactttatccattgattaccacttcctttgctccacacatctt 31086710  T
Q  117 tgttattcattgttgtgattttgt-ctgaattcacaacacaaccaa 161  Q
    |||| ||||||| ||||||||||| | |||||||||||||| ||||    
T  31086711 tgttcttcattggtgtgattttgtaccgaattcacaacacatccaa 31086756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 5017609 - 5017742
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactc----tatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgc 104  Q
    |||||| |||||||||||||||||||||||||||||  ||    | ||||| |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  5017609 gattatgcttgtggtgttgctctacacttagatctaggtctgttttttttttttgttgttgcttggagacactttatccattgattaccacttcctttgc 5017708  T
Q  105 tccacacatctttgttattcattgttgtgatttt 138  Q
    |||||||||||||||||||||||  |||||||||    
T  5017709 tccacacatctttgttattcattagtgtgatttt 5017742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 21801498 - 21801634
Alignment:
Q  17 ttgtggtgttgctctacacttagatctaactct-atttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatct 115  Q
    ||||||| ||| ||||||||||||| ||  ||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||  ||||||||||||    
T  21801498 ttgtggtattgttctacacttagatttaggtctgatttttgttgttgttgcttggagacactttatctattgattaccacttcctt--ctccacacatct 21801595  T
Q  116 ttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||||||| |||||||||||| |||||| |||||    
T  21801596 ttgttattcattggtgtgattttgtccgaattctcaaca 21801634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 22963656 - 22963550
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctattttt-gttgttgttgcttggagacactttatcaattgattaccacttcatttgctcc 107  Q
    |||||| |||||||||||||||||||||||||||||  ||| ||||| |||||||||||||||||||||||||| |||||||||||||||| || |||||    
T  22963656 gattatgcttgtggtgttgctctacacttagatctaggtctgttttttgttgttgttgcttggagacactttattaattgattaccacttccttagctcc 22963557  T
Q  108 acacatc 114  Q
    |||||||    
T  22963556 acacatc 22963550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 23824737 - 23824843
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttt-tgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcc 107  Q
    |||||| |||||||||||||||||||||||||||||  ||| |||| ||||||||||||||||||||||||||| |||||||||||||||| || |||||    
T  23824737 gattatgcttgtggtgttgctctacacttagatctaggtctgttttttgttgttgttgcttggagacactttattaattgattaccacttccttagctcc 23824836  T
Q  108 acacatc 114  Q
    |||||||    
T  23824837 acacatc 23824843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 136
Target Start/End: Original strand, 5757621 - 5757744
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccaca 110  Q
    |||| ||||||||||||||||||||| |||| ||  ||| ||||||||||||||||||||||||||||||   ||||||||||||||| |||||||||||    
T  5757621 ttatgcttgtggtgttgctctacact-agat-taggtctgtttttgttgttgttgcttggagacactttacacattgattaccacttcctttgctccaca 5757718  T
Q  111 catctttgttattcattgttgtgatt 136  Q
    | |||||||| ||||||| |||||||    
T  5757719 cttctttgtttttcattggtgtgatt 5757744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 21355985 - 21355867
Alignment:
Q  16 cttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatct 115  Q
    ||||||||||||||||||||| ||| |||  ||| ||||||||||||||||||| ||||||||||   ||||||||||||||| ||||||||||||||||    
T  21355985 cttgtggtgttgctctacact-aga-ctaggtctgtttttgttgttgttgcttgaagacactttacacattgattaccacttcctttgctccacacatct 21355888  T
Q  116 ttgttattcattgttgtgatt 136  Q
    ||||| ||||||| |||||||    
T  21355887 ttgtttttcattggtgtgatt 21355867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 161
Target Start/End: Original strand, 24436155 - 24436259
Alignment:
Q  57 ttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatctttgttattcattgttgtgattttgtctgaattcacaacaca 156  Q
    ||||||||| ||| |||||||||||| ||||||||||| |||  || ||||||||||||||||||||||||| ||| |||||||| |||||||||||||     
T  24436155 ttgttgttgtttgtagacactttatctattgattaccatttcccttactccacacatctttgttattcattggtgttattttgtccgaattcacaacact 24436254  T
Q  157 accaa 161  Q
    |||||    
T  24436255 accaa 24436259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 138
Target Start/End: Complemental strand, 31936541 - 31936414
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccac 109  Q
    |||| |||||||||||||||||||||| |||  |  |||  |||||||||||||||||||||||||||||   |||||||||||||| | ||||||||||    
T  31936541 ttatgcttgtggtgttgctctacactttgattaaggtct-gttttgttgttgttgcttggagacactttacacattgattaccacttccttttgctccac 31936443  T
Q  110 acatctttgttattcattgttgtgatttt 138  Q
    ||||||||||| ||||||| |||||||||    
T  31936442 acatctttgtttttcattggtgtgatttt 31936414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 4629909 - 4629772
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttg-ctcc 107  Q
    |||||| |||||||||||||||||||||||||| ||  ||| ||||||||         |||||||| |||||| ||||||||||||||| |||  ||||    
T  4629909 gattatgcttgtggtgttgctctacacttagatttaggtctgtttttgtt---------tggagacattttatctattgattaccacttccttttactcc 4629819  T
Q  108 acacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    |||||||||| |||||||||| |||||||||||| |||| |||||||    
T  4629818 acacatctttattattcattggtgtgattttgtccgaatccacaaca 4629772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 22708967 - 22708863
Alignment:
Q  16 cttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccact-tcatttgctccacacatc 114  Q
    ||||||||||||||||||| |||||||||  ||| ||||||||||||||||||||||||||||||   || ||||||||||  | ||||| | |||||||    
T  22708967 cttgtggtgttgctctaca-ttagatctaggtctgtttttgttgttgttgcttggagacactttacacatagattaccactcccctttgcactacacatc 22708869  T
Q  115 tttgtt 120  Q
    ||||||    
T  22708868 tttgtt 22708863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 26258182 - 26258252
Alignment:
Q  51 tttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatctttgtt 120  Q
    ||||||||||||||||||||||||||||||   |||| ||||||||| | ||||||||| |||||||||||    
T  26258182 tttttgttgttgttgcttggagacactttacacattggttaccacttccttttgctccatacatctttgtt 26258252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 27165583 - 27165545
Alignment:
Q  84 attgattaccacttcatttgctccacacatctttgttat 122  Q
    ||||||||| ||||| |||||||||||||||||||||||    
T  27165583 attgattacgacttcctttgctccacacatctttgttat 27165545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 31077082 - 31077134
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgtt 61  Q
    |||||| ||| || ||||| ||||||||||||| ||| |||||||||||||||    
T  31077082 gattatgcttatgatgttgttctacacttagatttaagtctatttttgttgtt 31077134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 3e-54; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 9765961 - 9766108
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||||||||||||||||||||||| ||  | | |||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||    
T  9765961 gattatgcttgtggtgttgctctacacttagatttaggtttgtttttgttgttgttgcttggagacactttatctattgattatcacttcctttgctcca 9766060  T
Q  109 cacatctttgttattcattgttgtgattttgtctgaattcacaacaca 156  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  9766061 cacatctttgttattcattggtgtgattttgtctgaattcacaacaca 9766108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 10 - 141
Target Start/End: Original strand, 5702625 - 5702756
Alignment:
Q  10 attattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccac 109  Q
    ||||| ||||||||| |||||||||||||||||||  ||| ||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||    
T  5702625 attatgcttgtggtgatgctctacacttagatctaggtctgtttttgttgttgttgctaggagacactttattcattgattaccacttcatttgctccac 5702724  T
Q  110 acatctttgttattcattgttgtgattttgtc 141  Q
    ||||||||||||||||||| ||||||||||||    
T  5702725 acatctttgttattcattggtgtgattttgtc 5702756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 26403371 - 26403515
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctcc 107  Q
    |||||| |||||||||||||||||||||||||| ||  ||| ||||||||||| |||||||||||||| ||||| |||||||||||||| | ||||||||    
T  26403371 gattatgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttattgcttggagacacattatctattgattaccacttccttttgctcc 26403470  T
Q  108 acacatctttgttattcattgttgtgattttgtctgaattcacaa 152  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||    
T  26403471 acacatctttgttattcattggtgtggttttgtccgaattcacaa 26403515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 6127176 - 6127029
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctattttt-gttgttgttgcttggagacactttatcaattgattaccacttcattt-gctc 106  Q
    |||||| ||||||||||||||||||||||| || ||  ||| ||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||    
T  6127176 gattatgcttgtggtgttgctctacacttaaatttatatctgttttttgttgttgttgcttggagacacttaatctattgattaccacttccttttgctc 6127077  T
Q  107 cacacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    |||||||||||||||||||||| |||||||||||  ||||||||||||    
T  6127076 cacacatctttgttattcattggtgtgattttgtacgaattcacaaca 6127029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 147
Target Start/End: Original strand, 4696745 - 4696882
Alignment:
Q  17 ttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactt-------tatcaattgattaccacttcatttgctccac 109  Q
    ||||||||||||||||||||||||| ||  ||| ||||||||||||||||||||||||||||       |||| ||||||||||||||| |||| |||||    
T  4696745 ttgtggtgttgctctacacttagatttatgtctgtttttgttgttgttgcttggagacactttatctagtatctattgattaccacttcctttgttccac 4696844  T
Q  110 acatctttgttattcattgttgtgattttgtctgaatt 147  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  4696845 acatctttgttattcattgatgtgattttgtccgaatt 4696882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 11 - 138
Target Start/End: Complemental strand, 4455981 - 4455855
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccaca 110  Q
    |||| ||||| ||||||||||||||| || || |  ||| |||||| |||||||||||||||||||||||   ||||||||||||||| |||||||||||    
T  4455981 ttatgcttgttgtgttgctctacactaag-tccaggtctgtttttgctgttgttgcttggagacactttacacattgattaccacttcctttgctccaca 4455883  T
Q  111 catctttgttattcattgttgtgatttt 138  Q
    |||||||| ||||||||| |||||||||    
T  4455882 catctttgatattcattggtgtgatttt 4455855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 19752535 - 19752665
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctcc 107  Q
    |||||| ||||||||||||| |||||||||||| ||  ||| |||| ||||||||||||||||||||||||||  |||||||||||||| | ||||||||    
T  19752535 gattatgcttgtggtgttgcactacacttagatttaggtctgtttt-gttgttgttgcttggagacactttatatattgattaccacttccttttgctcc 19752633  T
Q  108 acacatctttg-ttattcattgttgtgatttt 138  Q
    ||||||||||| || ||||||| |||||||||    
T  19752634 acacatctttgttttttcattggtgtgatttt 19752665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 28 - 154
Target Start/End: Original strand, 23799737 - 23799863
Alignment:
Q  28 ctctacacttagatctaactctatttt-tgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatctttgttattcat 126  Q
    |||||||||||||||||  |||||||| |||||||||| ||||||||||||||||| |||||||| |||||  |||||||||||||| ||| || |||||    
T  23799737 ctctacacttagatctaggtctattttttgttgttgtttcttggagacactttatctattgattaacactttctttgctccacacatattt-tttttcat 23799835  T
Q  127 tgttgtgattttgtctgaattcacaaca 154  Q
    || |||||||||||  ||||||||||||    
T  23799836 tggtgtgattttgtacgaattcacaaca 23799863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 138
Target Start/End: Original strand, 19175898 - 19176027
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacacttta----tcaattgattaccacttcatttgctc 106  Q
    |||| ||||||||||||||||||||| || ||||  |||  ||| |||||||||||||||||||||||||    | |||||||||||||||| |||||||    
T  19175898 ttatgcttgtggtgttgctctacactaag-tctaggtctgcttt-gttgttgttgcttggagacactttacacattaattgattaccacttcctttgctc 19175995  T
Q  107 cacacatctttgttattcattgttgtgatttt 138  Q
    |||||||||||||||||||||| |||||||||    
T  19175996 cacacatctttgttattcattggtgtgatttt 19176027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 5990709 - 5990843
Alignment:
Q  16 cttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatct 115  Q
    |||||||| ||| ||||||||||||| ||  |||||||  ||||||||||||||  |  |||||||| ||||||||| ||||| |||||||| |||||||    
T  5990709 cttgtggttttgttctacacttagatttaggtctattt--gttgttgttgcttgatgctactttatccattgattactacttcctttgctccgcacatct 5990806  T
Q  116 ttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||  || |||| |||||||||||| ||||||||||||    
T  5990807 ttgt--tttattgatgtgattttgtcggaattcacaaca 5990843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 26287850 - 26287713
Alignment:
Q  16 cttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatc 114  Q
    ||||||||||||||||||||| ||| |||   || ||||||||||||||||||||||||||||||   || ||||||||||| | |||||||||||||||    
T  26287850 cttgtggtgttgctctacact-aga-ctagggctgtttttgttgttgttgcttggagacactttacacatagattaccacttccttttgctccacacatc 26287753  T
Q  115 tttgttattcattgttgtga-ttttgtctgaattcacaaca 154  Q
    |||||| | ||||| ||||| |||| || ||||||||||||    
T  26287752 tttgtt-tacattggtgtgagttttatccgaattcacaaca 26287713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 26313101 - 26312964
Alignment:
Q  16 cttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatc 114  Q
    ||||||||||||||||||||| ||| |||   || ||||||||||||||||||||||||||||||   || ||||||||||| | |||||||||||||||    
T  26313101 cttgtggtgttgctctacact-aga-ctagggctgtttttgttgttgttgcttggagacactttacacatagattaccacttccttttgctccacacatc 26313004  T
Q  115 tttgttattcattgttgtga-ttttgtctgaattcacaaca 154  Q
    |||||| | ||||| ||||| |||| || ||||||||||||    
T  26313003 tttgtt-tacattggtgtgagttttatccgaattcacaaca 26312964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 31071378 - 31071516
Alignment:
Q  16 cttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatc 114  Q
    ||||||||||||||||||||| ||| |||   || ||||||||||||||||||||||||||||||   || ||||||||||| | |||||||||||||||    
T  31071378 cttgtggtgttgctctacact-aga-ctagggctgtttttgttgttgttgcttggagacactttacacatagattaccacttccttttgctccacacatc 31071475  T
Q  115 tttgttattcattgttgtga--ttttgtctgaattcacaaca 154  Q
    |||||| | ||||| |||||  |||| || ||||||||||||    
T  31071476 tttgtt-tacattggtgtgagtttttatccgaattcacaaca 31071516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 7412239 - 7412166
Alignment:
Q  63 ttgcttggagacactttatcaattgattaccacttcatttgctccacacatctttgttattcattgttgtgatt 136  Q
    ||||||||||||||||||   ||| ||||||||||| ||||||||||||||||||||| ||||||| |||||||    
T  7412239 ttgcttggagacactttacacattcattaccacttcctttgctccacacatctttgtttttcattggtgtgatt 7412166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 7493210 - 7493352
Alignment:
Q  17 ttgtggtgttgctctacacttagatctaactctattt-ttgttgttgttgct-----tggagac-actttatcaattgattaccacttcatttgctccac 109  Q
    ||||||||||||||||||||||||| ||  ||||||| ||||||||||||||     | ||||| ||||||   ||||||||| ||||| ||||||||||    
T  7493210 ttgtggtgttgctctacacttagatttagatctatttgttgttgttgttgctgctgcttgagactactttacacattgattactacttcctttgctccac 7493309  T
Q  110 acatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||| | ||  || |||| |||||||||||| ||||||||||||    
T  7493310 acatcatagt--tttattggtgtgattttgtccgaattcacaaca 7493352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 1262100 - 1262217
Alignment:
Q  15 tcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccact-tcatttgctccacacat 113  Q
    |||||||||||||||||||||| ||| |||   || ||||||||||||||||||||||||||||||   || ||||||||||  | ||| ||||||||||    
T  1262100 tcttgtggtgttgctctacact-aga-ctagggctgtttttgttgttgttgcttggagacactttactcatagattaccactcccttttactccacacat 1262197  T
Q  114 ctttgttattcattgttgtga 134  Q
    ||||||| ||||||| |||||    
T  1262198 ctttgtt-ttcattggtgtga 1262217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 6813638 - 6813489
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttt--tgttgttgttgct--tggagac-actttatcaattgattaccacttcatttg 103  Q
    |||||| |||||| ||||| |||||||| |||  ||| ||||||||  ||||||||||| |  | ||||| | ||| || |||||||||||||   ||||    
T  6813638 gattatgcttgtgatgttgttctacactaagacttaagtctattttgttgttgttgttgttgattgagactattttgtccattgattaccactcactttg 6813539  T
Q  104 ctccacacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||| ||||||||||||| ||||||| |||||||||||| ||||||||||||    
T  6813538 ctcaacacatctttgtt-ttcattggtgtgattttgtccgaattcacaaca 6813489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 154
Target Start/End: Complemental strand, 28307422 - 28307368
Alignment:
Q  99 atttgctccacacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    |||||||||||||||||||||| ||||||| ||||||||| || ||||||||||||    
T  28307422 atttgctccacacatctttgtt-ttcattggtgtgattttatccgaattcacaaca 28307368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 9055043 - 9055117
Alignment:
Q  75 actttatcaattgattaccacttcatttgctccacacatctttgttattcattgttgtgattttgtctgaattcaca 151  Q
    |||||||| ||||||||  ||||| ||| ||||||||||| ||||  ||||||| ||||||||||| ||||||||||    
T  9055043 actttatccattgattagtacttcctttactccacacatcattgt--ttcattgatgtgattttgtttgaattcaca 9055117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 154
Target Start/End: Complemental strand, 26301062 - 26300958
Alignment:
Q  51 tttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatctttgttattcattgttgtga-ttttgtctgaattc 148  Q
    |||||||||||||||||||  |||||||||   || ||||||||||| | |||||||||| |||||||||| | ||||| ||||| |||| || ||||||    
T  26301062 tttttgttgttgttgcttgttgacactttacacatagattaccacttccttttgctccacgcatctttgtt-tacattggtgtgagttttatccgaattc 26300964  T
Q  149 acaaca 154  Q
    ||||||    
T  26300963 acaaca 26300958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 36979290 - 36979205
Alignment:
Q  51 tttttgttgttgttgcttggagac-actttatcaattgattaccact-tcatttgctccacacatctttgttattcattgttgtga 134  Q
    ||||||||||||||||||||| || | ||| |  ||||||||||||| ||  |||||||||||||||||||| ||||||| |||||    
T  36979290 tttttgttgttgttgcttggaaaccattttgttcattgattaccactatctcttgctccacacatctttgtttttcattggtgtga 36979205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 30655553 - 30655469
Alignment:
Q  51 tttttgttgttgttgcttggaga-cactttatcaattgattaccact-tcatttgctccacacatctttgttattcattgttgtga 134  Q
    ||||||||||||||||||||| | || ||| |  ||||||||||||| ||  |||||||||||||||||||| ||||||| |||||    
T  30655553 tttttgttgttgttgcttggaaaccattttgttcattgattaccactatctcttgctccacacatctttgtt-ttcattggtgtga 30655469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 4e-53; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 19588702 - 19588557
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||||||||||||||||||||||| ||  ||| |||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  19588702 gattatgcttgtggtgttgctctacacttagatttaggtctttttttgttgttgttgcttggagacgctttatctattgattaccacttcctttgctcca 19588603  T
Q  109 cacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||    
T  19588602 cacatctttgttattcattggtgtgattttgtccgaattcacaaca 19588557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 42127551 - 42127701
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| ||||||||||||||||||| |||||| ||| ||| |||| ||||||||||||||||||||||||||| ||||||||||||||  |||||||||    
T  42127551 gattatgcttgtggtgttgctctacaattagatttaagtctgtttt-gttgttgttgcttggagacactttatccattgattaccactttctttgctcca 42127649  T
Q  109 cacatctttgttattcattgttgtgattttgtctgaattcacaacacaacca 160  Q
    |||||||||||||||||||  |||||||||||| |||||||||||| |||||    
T  42127650 cacatctttgttattcattagtgtgattttgtccgaattcacaacaaaacca 42127701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 28832215 - 28832071
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||||||||||||||||||||||| ||  ||| ||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||    
T  28832215 gattatgcttgtggtgttgctctacacttagat-taggtctgtttttgttgttgttgcttgaagacactttatccattgattaccacttcctttgctcca 28832117  T
Q  109 cacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    |||||||||||||||||||| | |||||||||| || |||||||||    
T  28832116 cacatctttgttattcattggtatgattttgtccgatttcacaaca 28832071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 11 - 138
Target Start/End: Complemental strand, 14520183 - 14520056
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccaca 110  Q
    |||| |||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||   ||||||||||||||| |||||||||||    
T  14520183 ttatgcttgtggtgttgctctacacttagatctaggtctgtttttgttgttgttgcttggagacactttacacattgattaccacttcctttgctccaca 14520084  T
Q  111 catctttgttattcattgttgtgatttt 138  Q
    |||||||||||||||||| |||||||||    
T  14520083 catctttgttattcattggtgtgatttt 14520056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 11181973 - 11182120
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttt--tgttgttgttgcttggagacactttatcaattgattaccacttcatttgctc 106  Q
    |||||| |||||||| ||||||||||||||||| ||| ||| ||||  |||||||||||||||||||||||||||| ||||||||||||||  |||||||    
T  11181973 gattatgcttgtggtattgctctacacttagatttaagtctgtttttttgttgttgttgcttggagacactttatctattgattaccacttactttgctc 11182072  T
Q  107 cacacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    |||||||||||||||||||||| |||||||||||   |||||||||||    
T  11182073 cacacatctttgttattcattggtgtgattttgttcaaattcacaaca 11182120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 17004101 - 17004244
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctcc 107  Q
    |||||| |||||||||||||| ||||||||||| ||  ||| |||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||    
T  17004101 gattatgcttgtggtgttgct-tacacttagatttaggtctgtttttgttgttgttgcttggagacactttatctattgattaccacttccttttgctcc 17004199  T
Q  108 acacatctttgttattcattgttgtgattttgtctgaattcacaa 152  Q
    |||| |||||||| ||||||| |||||||||||| ||||||||||    
T  17004200 acacctctttgtttttcattggtgtgattttgtccgaattcacaa 17004244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 3880256 - 3880113
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcattt-gctcc 107  Q
    |||||| |||||||||||||| ||||||||||| ||  ||| |||||||||||| |   || |||||||||||| ||||||||||||||| ||| |||||    
T  3880256 gattatgcttgtggtgttgctttacacttagatttaggtctgtttttgttgttgat---tgaagacactttatctattgattaccacttccttttgctcc 3880160  T
Q  108 acacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||||    
T  3880159 acacatctttgttattcattggtgtgattttgtacgaattcacaaca 3880113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 24553647 - 24553748
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| ||||||||||| |||||||||||||| ||  ||| ||||||||| |||||||||||||||||||||| |||||||| |||||| |||||||||    
T  24553647 gattatgcttgtggtgtttctctacacttagatttaggtctgtttttgttgatgttgcttggagacactttatccattgattatcacttcctttgctcca 24553746  T
Q  109 ca 110  Q
    ||    
T  24553747 ca 24553748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 9353480 - 9353599
Alignment:
Q  16 cttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatct 115  Q
    ||||||||||||||||||||| ||| |||  ||| ||||||||||||||||||||||||||||||   |||| |||||||||| ||||||||||||||||    
T  9353480 cttgtggtgttgctctacact-aga-ctaggtctgtttttgttgttgttgcttggagacactttacacattgtttaccacttcctttgctccacacatct 9353577  T
Q  116 ttg-ttattcattgttgtgatt 136  Q
    ||| || ||||||| |||||||    
T  9353578 ttgttttttcattggtgtgatt 9353599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 154
Target Start/End: Complemental strand, 15464485 - 15464343
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccac 109  Q
    |||| ||||||||||||||||||||| ||| |||  ||| ||||||||||||||||||||||||||||||   |||||||||||||| | ||||||||||    
T  15464485 ttatacttgtggtgttgctctacact-aga-ctaggtctgtttttgttgttgttgcttggagacactttacacattgattaccacttccttttgctccac 15464388  T
Q  110 acatctttgttattcattgttgtga-ttttgtctgaattcacaaca 154  Q
    ||||||||||| | ||||| ||||| |||| || ||||||||||||    
T  15464387 acatctttgtt-tacattggtgtgagttttatccgaattcacaaca 15464343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 11 - 138
Target Start/End: Original strand, 11917115 - 11917245
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactc---tatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcc 107  Q
    |||| ||||||||||||||||||||| |||||||  ||   | ||||| || || ||||||| ||||||||||   ||||||||||||||| |||||| |    
T  11917115 ttatgcttgtggtgttgctctacactaagatctaggtctttttttttttttttttttgcttgaagacactttacacattgattaccacttcctttgcttc 11917214  T
Q  108 acacatctttgttattcattgttgtgatttt 138  Q
    ||||||||||||||||||||| |||||||||    
T  11917215 acacatctttgttattcattggtgtgatttt 11917245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 31300744 - 31300886
Alignment:
Q  16 cttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatc 114  Q
    |||||||||||||||||||||||||| ||  ||| |||| |||||| ||||||| | |||||||||| ||||||||||| || | ||||||| | |||||    
T  31300744 cttgtggtgttgctctacacttagatttaggtctgtttt-gttgtttttgcttgaaaacactttatctattgattaccagttccttttgctcaatacatc 31300842  T
Q  115 tttgttattcattgttgtgattttgtctgaattcacaacacaac 158  Q
    ||| || ||||||  |||||||||| | ||||||||||||||||    
T  31300843 tttatttttcattagtgtgattttgaccgaattcacaacacaac 31300886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 154
Target Start/End: Original strand, 36932493 - 36932635
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactctatttt-tgttgttgttgcttggagacactttatcaattgattaccactt-catttgctcca 108  Q
    |||| ||||||||||||||||||||| ||| |||  ||| |||| ||||||||||||||||||||||||||   |||||||||| ||| | |||||||||    
T  36932493 ttatgcttgtggtgttgctctacact-aga-ctaggtctgttttttgttgttgttgcttggagacactttacacattgattacctcttccttttgctcca 36932590  T
Q  109 cacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    |||||||||||| | ||||| ||||| |||||| ||||||||||||    
T  36932591 cacatctttgtt-tacattggtgtgagtttgtccgaattcacaaca 36932635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 42126625 - 42126693
Alignment:
Q  86 tgattaccacttcatttgctccacacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| || ||||||||||||    
T  42126625 tgattaccacttcctttgctccacacatctttgttattcattggtgtgattttatccgaattcacaaca 42126693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 38192118 - 38192017
Alignment:
Q  18 tgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatctt 116  Q
    ||||||||||||||||||| || ||||   || ||||||||||||||||||||||||||||||   || ||||||||||| | |||||||||||||||||    
T  38192118 tgtggtgttgctctacact-ag-tctagggctgtttttgttgttgttgcttggagacactttacacatagattaccacttccttttgctccacacatctt 38192021  T
Q  117 tgtt 120  Q
    ||||    
T  38192020 tgtt 38192017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 38219343 - 38219242
Alignment:
Q  18 tgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatctt 116  Q
    ||||||||||||||||||| || ||||   || ||||||||||||||||||||||||||||||   || ||||||||||| | |||||||||||||||||    
T  38219343 tgtggtgttgctctacact-ag-tctagggctgtttttgttgttgttgcttggagacactttacacatagattaccacttccttttgctccacacatctt 38219246  T
Q  117 tgtt 120  Q
    ||||    
T  38219245 tgtt 38219242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 154
Target Start/End: Complemental strand, 10281727 - 10281673
Alignment:
Q  100 tttgctccacacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||||||||||||||||||||||| ||||||||||||  |||||||||||    
T  10281727 tttgctccacacatctttgttattcattggtgtgattttgtccaaattcacaaca 10281673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 12084317 - 12084376
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgctt 68  Q
    |||||| |||||||||||||||||||||||||||||  ||| |||||||| |||||||||    
T  12084317 gattatgcttgtggtgttgctctacacttagatctaggtctgtttttgtttttgttgctt 12084376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 154
Target Start/End: Complemental strand, 6741718 - 6741665
Alignment:
Q  100 tttgctccacacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  6741718 tttgctccacacatctttgtt-ttcattgatgttattttgtctgaattcacaaca 6741665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 35387578 - 35387508
Alignment:
Q  51 tttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatctttgtt 120  Q
    ||||||||||||||||||||||||||||||   || ||||| ||||| | |||||||||||||||||||||    
T  35387578 tttttgttgttgttgcttggagacactttacacatagattatcacttccttttgctccacacatctttgtt 35387508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 24555833 - 24555877
Alignment:
Q  110 acatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||    
T  24555833 acatctttgttattcattggtgtgattttgtccgaattcacaaca 24555877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 24596864 - 24596908
Alignment:
Q  110 acatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||    
T  24596864 acatctttgttattcattggtgtgattttgtccgaattcacaaca 24596908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 33031083 - 33031233
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctattt----ttgttgttgttgcttggaga-cactttatcaattgattaccacttcatttg 103  Q
    ||||||||| ||||| ||||||||||||||||| ||  | |||||    ||||||||| ||||||  || ||||||||| ||| ||||| | ||| ||||    
T  33031083 gattattctcgtggtattgctctacacttagatttatatttatttgttgttgttgttggtgcttgaggatcactttatccattaattactatttcctttg 33031182  T
Q  104 ctccacacatctttgttattcattgttgtgattttgtctgaattcacaacaca 156  Q
    |||||||||||||| |  || |||| |||| |||||||  |||||||||||||    
T  33031183 ctccacacatctttat--tttattggtgtgtttttgtccaaattcacaacaca 33031233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 213790 - 213827
Alignment:
Q  101 ttgctccacacatctttgttattcattgttgtgatttt 138  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  213790 ttgctctacacatctttgttattcattggtgtgatttt 213827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 28537530 - 28537430
Alignment:
Q  54 ttgttgttgttgcttggagac-actttatcaattgattaccacttcatttgctccacacatctttgttattcattgttgtgattttgtctgaattcacaa 152  Q
    |||||||||||||||| |||| ||||||   ||||||||| || |  ||||||||| |||||||||| |||||||| | |||||||| |  |||||||||    
T  28537530 ttgttgttgttgcttg-agactactttactcattgattactaccttttttgctccatacatctttgtaattcattggtatgattttgaccaaattcacaa 28537432  T
Q  153 ca 154  Q
    ||    
T  28537431 ca 28537430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 4e-53; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 20522176 - 20522031
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||||||||||||||||||||||||||  ||| ||||||||||| |||||||||||||||||||| ||||||||||||||| ||| |||||    
T  20522176 gattatgcttgtggtgttgctctacacttagatctatgtctttttttgttgtttttgcttggagacactttatccattgattaccacttccttttctcca 20522077  T
Q  109 cacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||    
T  20522076 cacatctttgttattcattggtgtgattttgtccgaattcacaaca 20522031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 157
Target Start/End: Complemental strand, 8040016 - 8039867
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctcc 107  Q
    |||||| |||||||||||||||||||||||||| ||  ||| ||||||||||||||||||| |||||||||||| |||||||||||||| | ||||||||    
T  8040016 gattatgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgttgcttgaagacactttatctattgattaccacttccttttgctcc 8039917  T
Q  108 acacatctttgttattcattgttgtgattttgtctgaattcacaacacaa 157  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||||||    
T  8039916 acacatctttgttattcattggtgtgattttgtacgaattcacaacacaa 8039867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 33528762 - 33528907
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| ||||||||||||||||||| |||||||||  ||| |||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||    
T  33528762 gattatgcttgtggtgttgctctacatttagatctaggtctgtttttgttgttgttgcttggggacactttatccattgattaccacttcctttgctcca 33528861  T
Q  109 cacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    |||||||||||||||||||| ||  |||||||| ||||||||||||    
T  33528862 cacatctttgttattcattggtggaattttgtccgaattcacaaca 33528907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 9 - 155
Target Start/End: Original strand, 34682475 - 34682622
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccac-ttcatttgctcc 107  Q
    |||||| |||||||||||||||||||||||||| ||  ||| |||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||    
T  34682475 gattatgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgttgcttggagacactttatctattgattaccactttcttttgctcc 34682574  T
Q  108 acacatctttgttattcattgttgtgattttgtctgaattcacaacac 155  Q
    ||||||||||||||||||||| |||| ||||||  |||||||||||||    
T  34682575 acacatctttgttattcattggtgtggttttgtacgaattcacaacac 34682622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 9 - 159
Target Start/End: Complemental strand, 17865159 - 17865009
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||||||||||||||||||||||||||  | | ||||||||||||||| ||||||||| |||||| ||||||||||||||| ||| |||||    
T  17865159 gattatgcttgtggtgttgctctacacttagatctaggtatgtttttgttgttgttggttggagacattttatccattgattaccacttccttttctcca 17865060  T
Q  109 cacatctttgttattcattgttgtgattttgtctgaattcacaacacaacc 159  Q
    ||||| |||||||||||||| |||||||||||| |||||||||||| ||||    
T  17865059 cacatttttgttattcattggtgtgattttgtccgaattcacaacataacc 17865009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 21629897 - 21629762
Alignment:
Q  17 ttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatctt 116  Q
    |||||||| |||||||||||||||||||  ||| |||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  21629897 ttgtggtgctgctctacacttagatctaggtctgtttt-gttgttgttgcttggagacactttatctattgattaccacttcctttgctccacacatctt 21629799  T
Q  117 tgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    |||| ||||||| |||||||||||| ||||||||||||    
T  21629798 tgtt-ttcattggtgtgattttgtccgaattcacaaca 21629762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 10445585 - 10445732
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttt-tgttgttgttgcttggagacactttatcaattgattaccactt-catttgctc 106  Q
    |||||| |||||||| ||||||||||||||||| ||  ||| |||| |||||||||||||||||||||||||||| |||||||||||||| | |||||||    
T  10445585 gattatgcttgtggttttgctctacacttagatttaggtctgttttttgttgttgttgcttggagacactttatccattgattaccacttccttttgctc 10445684  T
Q  107 cacacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    |||||||||||||| ||||||| |||||||||||| ||||||||||||    
T  10445685 cacacatctttgtttttcattggtgtgattttgtccgaattcacaaca 10445732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 9 - 123
Target Start/End: Complemental strand, 31055998 - 31055884
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||||||||||||||||||||||| ||  ||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  31055998 gattatgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgttgcttggagacactttatctattgattaccacttcctttgctcca 31055899  T
Q  109 cacatctttgttatt 123  Q
    |||||||||||||||    
T  31055898 cacatctttgttatt 31055884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 16940350 - 16940496
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| ||| |||||| ||||| ||||||||||||  ||| |||||||||||||||| | ||||||||||||  ||||||||||||||| |||||||||    
T  16940350 gattatgcttttggtgtcgctctgcacttagatctaggtctgtttttgttgttgttgcatagagacactttattcattgattaccacttcctttgctcca 16940449  T
Q  109 cacatctttgttattcattgttgtgattttgt-ctgaattcacaaca 154  Q
    |||||||||||||||||||| ||||||||||| | ||||||||||||    
T  16940450 cacatctttgttattcattggtgtgattttgtaccgaattcacaaca 16940496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 17011015 - 17011161
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| ||| |||||| ||||| ||||||||||||  ||| |||||||||||||||| | ||||||||||||  ||||||||||||||| |||||||||    
T  17011015 gattatgcttttggtgtcgctctgcacttagatctaggtctgtttttgttgttgttgcatagagacactttattcattgattaccacttcctttgctcca 17011114  T
Q  109 cacatctttgttattcattgttgtgattttgt-ctgaattcacaaca 154  Q
    |||||||||||||||||||| ||||||||||| | ||||||||||||    
T  17011115 cacatctttgttattcattggtgtgattttgtaccgaattcacaaca 17011161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 138
Target Start/End: Original strand, 42039813 - 42039939
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccaca 110  Q
    |||| ||||||||||||||||||||||| |||||  | | ||||||||||||||||||||||||||||||   ||||||||||||||| |||||||||||    
T  42039813 ttatgcttgtggtgttgctctacactta-atctaggtatgtttttgttgttgttgcttggagacactttacacattgattaccacttcctttgctccaca 42039911  T
Q  111 catctttgttattcattgttgtgatttt 138  Q
    |||||||||||||||||| |||||||||    
T  42039912 catctttgttattcattggtgtgatttt 42039939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 23078612 - 23078742
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactct-atttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcc 107  Q
    |||||| |||||||||||||||||||||||||||||  | |  ||||||||||||||||||||||||||||||   ||||||||||||||| ||||||||    
T  23078612 gattatgcttgtggtgttgctctacacttagatctaggtatgttttttgttgttgttgcttggagacactttacacattgattaccacttcctttgctcc 23078711  T
Q  108 acacatctttgttattcattgttgtgatttt 138  Q
    ||||||||||||| ||||||| |||||||||    
T  23078712 acacatctttgtttttcattggtgtgatttt 23078742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 34388808 - 34388686
Alignment:
Q  16 cttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatct 115  Q
    |||||||||||||||||||||||||||||  ||| ||||||||||||||||||| ||||||||||   ||||||||||||||| ||||||||||||||||    
T  34388808 cttgtggtgttgctctacacttagatctaggtctgtttttgttgttgttgcttgaagacactttacatattgattaccacttcctttgctccacacatct 34388709  T
Q  116 ttgttattcattgttgtgatttt 138  Q
    | |||||| |||| |||||||||    
T  34388708 tcgttatttattggtgtgatttt 34388686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 33118092 - 33117974
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||||||||||||||||||||||| ||  ||| |||||||||||| || ||| |||||||||||| ||||||||||||||| |||| ||||    
T  33118092 gattatgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgatgtttgaagacactttatctattgattaccacttcctttgatcca 33117993  T
Q  109 cacatctttgttattcatt 127  Q
    |||||||||||||||||||    
T  33117992 cacatctttgttattcatt 33117974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 14699135 - 14699285
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactc----tatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgc 104  Q
    |||||| |||||||||||||||||||||||||| ||  ||    | || ||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  14699135 gattatgcttgtggtgttgctctacacttagatttaggtctgctttttgttgttgttgttgcttggagacactttatctattgattaccacttcctttgc 14699234  T
Q  105 tccacacatctttgttattcattgttgtg-attttgtctgaattcacaaca 154  Q
    |||||||||| ||| ||||||||| ||||  ||||||| ||||||||||||    
T  14699235 tccacacatcattgatattcattgatgtgttttttgtccgaattcacaaca 14699285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 10707392 - 10707523
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttt--tgttgttgttgcttggagacactttatcaattgattaccacttcatttgctc 106  Q
    |||||| ||||  |||||||||||||||||||||||  | ||||||  ||||||||||||||||||||||||||   ||||||||||||||| |||||||    
T  10707392 gattatgcttgcagtgttgctctacacttagatctaggtatattttcttgttgttgttgcttggagacactttacacattgattaccacttcttttgctc 10707491  T
Q  107 cacacatctttgttattcattgttgtgatttt 138  Q
    |||||||||||||||||||| | |||||||||    
T  10707492 cacacatctttgttattcatgggtgtgatttt 10707523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 161
Target Start/End: Complemental strand, 13569285 - 13569130
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctattttt-gttgttgttgcttggagacactttatcaattgattaccacttcatttgctcc 107  Q
    |||||| ||||||||||| ||||| ||||||||||||  || ||||| |||||||||| ||||||||||||||   ||||||||||||||| ||| ||||    
T  13569285 gattatgcttgtggtgtttctctatacttagatctaagcctgttttttgttgttgttgtttggagacactttacacattgattaccacttcctttactcc 13569186  T
Q  108 acacatctttgttattcattgttgtgattttgt--ctgaattcacaacacaaccaa 161  Q
    ||||||||||||||||||||| ||||||||| |  | |||||||||||| ||||||    
T  13569185 acacatctttgttattcattggtgtgattttttaccggaattcacaacaaaaccaa 13569130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 11 - 138
Target Start/End: Original strand, 36757906 - 36758031
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccaca 110  Q
    |||| ||||||||||||||||||||| || ||||  |||  |||||||||||||||||||||||||||||   ||||||||||||||| |||||||||||    
T  36757906 ttatgcttgtggtgttgctctacactaag-tctaggtct-gttttgttgttgttgcttggagacactttacacattgattaccacttcctttgctccaca 36758003  T
Q  111 catctttgttattcattgttgtgatttt 138  Q
    |||||||||||||||||| |||||||||    
T  36758004 catctttgttattcattggtgtgatttt 36758031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 11 - 154
Target Start/End: Complemental strand, 39482885 - 39482746
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactctattttt-gttgttgttgcttggagacactttatcaattgattaccacttcatttgctccac 109  Q
    |||| |||||||||||| ||||||||||||| ||  ||| ||||| |||||||||| |||||||||||||||| |||| |||    ||||||||||||||    
T  39482885 ttatgcttgtggtgttgttctacacttagatttaggtctgttttttgttgttgttgtttggagacactttatctattg-tta----ttcatttgctccac 39482791  T
Q  110 acatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||||||||||||  |||||||||||||||||||||||||    
T  39482790 acatctttgttattcatttgtgtgattttgtctgaattcacaaca 39482746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 8390290 - 8390441
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactc----tatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgc 104  Q
    |||||| |||||||||||||||||||||||||||||  ||    | || |||||||||||| ||||| |||||||||| ||||||||||||||| ||| |    
T  8390290 gattatgcttgtggtgttgctctacacttagatctaggtctggtttttgttgttgttgttgtttggatacactttatccattgattaccacttcctttac 8390389  T
Q  105 tccacacatctttgttattcattgttgtgattttgt--ctgaattcacaaca 154  Q
    ||||||||||||| || ||||||| |||||||||||  | ||||||||||||    
T  8390390 tccacacatctttatttttcattggtgtgattttgtaccggaattcacaaca 8390441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 136
Target Start/End: Original strand, 28259360 - 28259445
Alignment:
Q  51 tttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatctttgttattcattgttgtgatt 136  Q
    |||||||| |||||||||||||||||||||   ||||||||  ||||| ||||||||||||||||||||| ||||||| |||||||    
T  28259360 tttttgttattgttgcttggagacactttacacattgattattacttcctttgctccacacatctttgtttttcattggtgtgatt 28259445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 3491700 - 3491563
Alignment:
Q  16 cttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatc 114  Q
    ||||||||||||||||||||| ||| |||   || ||||||||||||||||||||||||||||||   || ||||||||||| | |||||||||||||||    
T  3491700 cttgtggtgttgctctacact-aga-ctagggctgtttttgttgttgttgcttggagacactttacacatagattaccacttccttttgctccacacatc 3491603  T
Q  115 tttgttattcattgttgtga-ttttgtctgaattcacaaca 154  Q
    |||||| | ||||| ||||| |||| || ||||||||||||    
T  3491602 tttgtt-tacattggtgtgagttttatccgaattcacaaca 3491563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 149
Target Start/End: Complemental strand, 40014837 - 40014744
Alignment:
Q  54 ttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatctttgttattcattgttgtgattttgtctgaattca 149  Q
    ||||||||||||||||  ||||||||  | ||||||||| ||||| ||||||||| |||||||||||  |||||| |||||||||||| |||||||    
T  40014837 ttgttgttgttgcttgaggacacttt--ccattgattactacttcctttgctccatacatctttgtttgtcattggtgtgattttgtccgaattca 40014744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 25398440 - 25398339
Alignment:
Q  18 tgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatctt 116  Q
    ||||||||||||||||||| || ||||   || ||||||||||||||||||||||||||||||   || ||||||||||| | |||||||||||||||||    
T  25398440 tgtggtgttgctctacact-ag-tctagggctgtttttgttgttgttgcttggagacactttacacatagattaccacttccttttgctccacacatctt 25398343  T
Q  117 tgtt 120  Q
    ||||    
T  25398342 tgtt 25398339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 25403578 - 25403477
Alignment:
Q  18 tgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatctt 116  Q
    ||||||||||||||||||| || ||||   || ||||||||||||||||||||||||||||||   || ||||||||||| | |||||||||||||||||    
T  25403578 tgtggtgttgctctacact-ag-tctagggctgtttttgttgttgttgcttggagacactttacacatagattaccacttccttttgctccacacatctt 25403481  T
Q  117 tgtt 120  Q
    ||||    
T  25403480 tgtt 25403477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 100 - 155
Target Start/End: Complemental strand, 32178459 - 32178403
Alignment:
Q  100 tttgctccacacatctttgttattcattgttgtgattttgtctg-aattcacaacac 155  Q
    ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||    
T  32178459 tttgctccacacatctttgttattcattggtgtgattttgtatgcaattcacaacac 32178403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 27149012 - 27149150
Alignment:
Q  16 cttgtggtgttgctctacacttagatctaactctatttt--tgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacat 113  Q
    |||||||||||||| ||||  ||||| ||  ||||| ||  |||||||||||||||  |  ||||||   |||||||| |||||  ||||||||||||||    
T  27149012 cttgtggtgttgctttacaaatagatttagatctatgttattgttgttgttgcttgatgctactttactcattgattatcactttctttgctccacacat 27149111  T
Q  114 ctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||  || |||| |||||||||||| ||||| ||||||    
T  27149112 ctttgt--ttgattggtgtgattttgtccgaattaacaaca 27149150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 35397467 - 35397325
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||||| ||||||| ||| ||||| ||  | |||||| ||||||||||||||  | || || |   ||||||||| ||||| | ||||||     
T  35397467 gattatgcttgtggttttgctctgcacatagatttaggtatatttt-gttgttgttgcttgaggtcatttcactcattgattactacttcctctgctccg 35397369  T
Q  109 cacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||||||  |||||| |||| ||||||| ||||||||||||    
T  35397368 cacatctttgtt--tcattggtgtgtttttgtccgaattcacaaca 35397325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 134
Target Start/End: Original strand, 11099111 - 11099196
Alignment:
Q  51 tttttgttgttgttgcttggagac-actttatcaattgattaccact-tcatttgctccacacatctttgttattcattgttgtga 134  Q
    ||||||||||||||||||||| || | ||| |  ||||||||||||| ||  |||||||||||||||||||| ||||||| |||||    
T  11099111 tttttgttgttgttgcttggaaaccattttgttcattgattaccactatctcttgctccacacatctttgtttttcattggtgtga 11099196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 40738752 - 40738688
Alignment:
Q  54 ttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatcttt 117  Q
    |||||||||||||||||||||||||||   || ||||||||||| | ||| ||||||||||||||    
T  40738752 ttgttgttgttgcttggagacactttacatatagattaccacttccttttactccacacatcttt 40738688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 4e-53; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 775628 - 775483
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||||||||||||||||||||||| ||  ||| |||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||    
T  775628 gattatgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgttgcttggagacactttatctattggttaccacttcctttgctcca 775529  T
Q  109 cacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||    
T  775528 cacatctttgttattcattggtgtgattttgtccgaattcacaaca 775483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 47098965 - 47099111
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||||||||||||||||||||||| ||  ||| |||| ||||||||| ||||||||||||||||| ||||||||||||||| |||||||||    
T  47098965 gattatacttgtggtgttgctctacacttagatttaggtctgtttt-gttgttgttacttggagacactttatctattgattaccacttcctttgctcca 47099063  T
Q  109 cacatctttgttattcattgttgtg--attttgtctgaattcacaaca 154  Q
    |||||||||||||||||||| ||||  |||||||| ||||||||||||    
T  47099064 cacatctttgttattcattggtgtgatattttgtcagaattcacaaca 47099111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 29651767 - 29651620
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctattttt-gttgttgttgcttggagacactttatcaattgattaccacttcatttgctcc 107  Q
    |||||| |||||||||||||||||||||||||||||| ||| ||||| |||||||||| ||  |||||||||||  ||||||||||||||| ||||||||    
T  29651767 gattatgcttgtggtgttgctctacacttagatctaagtctgttttttgttgttgttgattatagacactttattcattgattaccacttcctttgctcc 29651668  T
Q  108 acacatctttgttattcattgttgtga-ttttgtctgaattcacaaca 154  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  29651667 acacatctttgttattcattggtgtgatttttgtccgaattcacaaca 29651620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 40816873 - 40817020
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttt-tgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcc 107  Q
    |||||| || ||||||||||||||||||||||| ||  ||| |||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  40816873 gattatgctcgtggtgttgctctacacttagatttaggtctgttttttgttgttgttgcttggagacactttatctattgattaccacttcctttgctcc 40816972  T
Q  108 acacatctttgttattcattgttgtg-attttgtctgaattcacaaca 154  Q
    ||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  40816973 acacatctttgttattcattggtgtgttttttgtccgaattcacaaca 40817020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 19072883 - 19072737
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactct-atttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcc 107  Q
    |||||| |||||||||||||||||||||||||| ||  ||| ||||||||||||||||||| ||||||||||||| ||||||||| ||||| |||| |||    
T  19072883 gattatgcttgtggtgttgctctacacttagatttaggtctgatttttgttgttgttgcttcgagacactttatctattgattactacttcctttgttcc 19072784  T
Q  108 acacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||| ||||||||||||||||| |||||||||||| |||||| |||||    
T  19072783 acatatctttgttattcattggtgtgattttgtccgaattctcaaca 19072737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 19120773 - 19120627
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactct-atttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcc 107  Q
    |||||| |||||||||||||||||||||||||| ||  ||| ||||||||||||||||||| ||||||||||||| ||||||||| ||||| |||| |||    
T  19120773 gattatgcttgtggtgttgctctacacttagatttaggtctgatttttgttgttgttgcttcgagacactttatctattgattactacttcctttgttcc 19120674  T
Q  108 acacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||| ||||||||||||||||| |||||||||||| |||||| |||||    
T  19120673 acatatctttgttattcattggtgtgattttgtccgaattctcaaca 19120627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 47102982 - 47103127
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||||||||||||||||||||||| ||  ||| |||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  47102982 gattatacttgtggtgttgctctacacttagatttaggtctgtttt-gttgttgttgctttgagacactttatctattgattaccacttcatttgctcca 47103080  T
Q  109 cacatctttgttattcattgttgtgat-tttgtctgaattcacaaca 154  Q
    ||| ||||| |||||||||| |||||| |||||| || |||||||||    
T  47103081 cacgtctttattattcattggtgtgatatttgtccgagttcacaaca 47103127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 16124666 - 16124799
Alignment:
Q  17 ttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatctt 116  Q
    |||||||||||||||||| |||||||||  ||| ||||||||||||||||||||| ||| |||||  ||||||||||||||| |||||| ||||||||||    
T  16124666 ttgtggtgttgctctacatttagatctaggtctgtttttgttgttgttgcttggacacattttattcattgattaccacttcctttgcttcacacatctt 16124765  T
Q  117 tgttattcattgttgtgattttgtctgaattcac 150  Q
    |||||||||||| |||||||||||| | ||||||    
T  16124766 tgttattcattggtgtgattttgtccggattcac 16124799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 138
Target Start/End: Original strand, 47704084 - 47704208
Alignment:
Q  16 cttgtggtgttgctctacacttagatctaactctatttt-tgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacat 113  Q
    |||||||||||||||||||||||||| ||  |||||||| |||||||| ||||||||||||||||||| |||||||||||||| | ||||||||||||||    
T  47704084 cttgtggtgttgctctacacttagatttaggtctattttttgttgttgctgcttggagacactttatctattgattaccacttccttttgctccacacat 47704183  T
Q  114 ctttgttattcattgttgtgatttt 138  Q
    ||||||||||||||| |||||||||    
T  47704184 ctttgttattcattgatgtgatttt 47704208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 27104513 - 27104653
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctcc 107  Q
    |||||| |||||||||||||||||||||||||| ||  ||| ||    |||||||||||||||||||||||||| |||||||||||||| | ||||||||    
T  27104513 gattatgcttgtggtgttgctctacacttagatttaggtctgtt----ttgttgttgcttggagacactttatctattgattaccacttccttttgctcc 27104608  T
Q  108 acacatctttgttattcattgttgtgattttgtctgaattcacaa 152  Q
    ||||||||||||| ||||||| |||||||||| | ||||||||||    
T  27104609 acacatctttgtttttcattggtgtgattttgacagaattcacaa 27104653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 13598354 - 13598206
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgct---tggagacactttatcaattgattaccacttcatttgct 105  Q
    |||||| ||||||||||| |||||||||||||||||  ||| ||||||||||||||| |   ||||||||||| | | ||||||||||||||| ||| ||    
T  13598354 gattatgcttgtggtgtttctctacacttagatctaggtctgtttttgttgttgttgttgtttggagacacttaa-ctattgattaccacttcctttact 13598256  T
Q  106 ccacacatctttgttattcattgttgtgattttgtctga-attcacaaca 154  Q
    ||||||||||||||||||||||| ||||||||||||| | ||||||||||    
T  13598255 ccacacatctttgttattcattggtgtgattttgtctcagattcacaaca 13598206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 138
Target Start/End: Original strand, 21536718 - 21536839
Alignment:
Q  16 cttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatct 115  Q
    ||||||||||||||||||| | || ||||  ||||||||||||||||||| ||||||||||||||   ||||||||||||||| ||||||||||||||||    
T  21536718 cttgtggtgttgctctacagtaag-tctaggtctatttttgttgttgttgattggagacactttacacattgattaccacttcctttgctccacacatct 21536816  T
Q  116 ttgttattcattgttgtgatttt 138  Q
    ||||| ||||||| |||||||||    
T  21536817 ttgtttttcattggtgtgatttt 21536839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 26645041 - 26645166
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccaca 110  Q
    |||| ||||||||||||||||||||| || ||||  |||  |||||||||||||||||  ||||||||||   |||||||||||||||||||||||||||    
T  26645041 ttatgcttgtggtgttgctctacactaag-tctaggtctgcttttgttgttgttgcttaaagacactttacacattgattaccacttcatttgctccaca 26645139  T
Q  111 catctttgttattcattgttgtgattt 137  Q
    |||||||||||||||||| ||||||||    
T  26645140 catctttgttattcattggtgtgattt 26645166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 138
Target Start/End: Complemental strand, 3281661 - 3281537
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccaca 110  Q
    |||||||||||||||||||||||||  || ||||  ||| ||||||||||||||||||||||||||||||   ||||||||||||||| ||| |||  ||    
T  3281661 ttattcttgtggtgttgctctacacaaag-tctatgtctttttttgttgttgttgcttggagacactttacacattgattaccacttcctttactc--ca 3281565  T
Q  111 catctttgttattcattgttgtgatttt 138  Q
    |||||||||||||||||| |||||||||    
T  3281564 catctttgttattcattggtgtgatttt 3281537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 9023973 - 9024116
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||||||||||| ||||||||||| ||  |  || ||||||||| |||||||| |  |||||||| ||||||||||||||  | |||||||    
T  9023973 gattatgcttgtggtgttgctatacacttagatttaggt--atgtttgttgttattgcttggggctactttatccattgattaccactttctctgctcca 9024070  T
Q  109 cacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||| |||||||| ||||||| ||||||||||||| |||||||||||    
T  9024071 cacttctttgtttttcattggtgtgattttgtctaaattcacaaca 9024116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 52 - 154
Target Start/End: Complemental strand, 9476176 - 9476073
Alignment:
Q  52 ttttgttgttgttgcttggagacactttatcaattgattaccacttcattt-gctccacacatctttgttattcattgttgtgattttgtctgaattcac 150  Q
    ||||||| ||||||||||||||||||||||| ||| ||||| ||||||||| |||| ||||||||||||| ||||||| |||||||||||  ||||||||    
T  9476176 ttttgttattgttgcttggagacactttatccattaattactacttcattttgctctacacatctttgtttttcattggtgtgattttgttcgaattcac 9476077  T
Q  151 aaca 154  Q
    ||||    
T  9476076 aaca 9476073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 11 - 136
Target Start/End: Complemental strand, 37069723 - 37069597
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaa--ctctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||| ||||||||||||||||||| |||  |||||  || | ||||| || |||||||||||||||||||||   ||||||||||||||| |||||||||    
T  37069723 ttatgcttgtggtgttgctctaca-ttaagtctaagtctgtttttttttttttgttgcttggagacactttacacattgattaccacttcctttgctcca 37069625  T
Q  109 cacatctttgttattcattgttgtgatt 136  Q
    |||||||||||| ||||||| |||||||    
T  37069624 cacatctttgtttttcattggtgtgatt 37069597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 138
Target Start/End: Complemental strand, 32889392 - 32889266
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccac-ttcatttgctccac 109  Q
    |||| |||||||||||||||||||||||||| ||  |||  |||||||||| ||||||||||||||||||   |||||||| ||| ||| ||||||||||    
T  32889392 ttatacttgtggtgttgctctacacttagatttagatct-gttttgttgttattgcttggagacactttacacattgattatcactttcttttgctccac 32889294  T
Q  110 acatctttgttattcattgttgtgatttt 138  Q
    ||||||||||| ||||||| | |||||||    
T  32889293 acatctttgtt-ttcattggtatgatttt 32889266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 57 - 154
Target Start/End: Original strand, 13604812 - 13604909
Alignment:
Q  57 ttgttgttgcttggagacactttatcaattgattaccacttcattt-gctccacacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||| ||||||||||||||   |||||||| |||||| ||| |||||||||||||||||| | ||||| |||||||||||| ||||||||||||    
T  13604812 ttgttgttgtttggagacactttacacattgattatcacttccttttgctccacacatctttgtt-tacattggtgtgattttgtccgaattcacaaca 13604909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 19359028 - 19359098
Alignment:
Q  51 tttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatctttgtt 120  Q
    ||||||||||||||||||||||||||||||   || ||||||||||| | |||||||||||||||||||||    
T  19359028 tttttgttgttgttgcttggagacactttacacatagattaccacttccttttgctccacacatctttgtt 19359098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 50521319 - 50521389
Alignment:
Q  84 attgattaccacttcatttgctccacacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||||||||| ||| |||||||||||||| || || |||| |||||||||||| ||||||||||||    
T  50521319 attgattaccacttcctttactccacacatctttattttttattgatgtgattttgtccgaattcacaaca 50521389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 19361618 - 19361688
Alignment:
Q  51 tttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatctttgtt 120  Q
    ||||| ||||||||||||||||||||||||   || ||||||||||| | |||||||||||||||||||||    
T  19361618 ttttttttgttgttgcttggagacactttacacatagattaccacttccttttgctccacacatctttgtt 19361688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 19380258 - 19380328
Alignment:
Q  51 tttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatctttgtt 120  Q
    ||||| ||||||||||||||||||||||||   || ||||||||||| | |||||||||||||||||||||    
T  19380258 ttttttttgttgttgcttggagacactttacacatagattaccacttccttttgctccacacatctttgtt 19380328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 120
Target Start/End: Complemental strand, 22819336 - 22819270
Alignment:
Q  54 ttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatctttgtt 120  Q
    |||||||||||||||   ||||||||||| ||||||||||| ||  |||||||||||||||||||||    
T  22819336 ttgttgttgttgcttaaggacactttatccattgattaccattttctttgctccacacatctttgtt 22819270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 47704222 - 47704266
Alignment:
Q  110 acatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||    
T  47704222 acatctttgttattcattggtgtgattttgtccgaattcacaaca 47704266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 134
Target Start/End: Original strand, 24202950 - 24203033
Alignment:
Q  52 ttttgttgttgtt-gcttggagacactttatcaattgattaccacttcattt-gctccacacatctttgttattcattgttgtga 134  Q
    ||||||||||||| ||||||||||||||||   || |||||||||| | ||| |||||||||||||||||| ||||||| |||||    
T  24202950 ttttgttgttgtttgcttggagacactttacacatagattaccactcccttttgctccacacatctttgtt-ttcattggtgtga 24203033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 17345735 - 17345805
Alignment:
Q  84 attgattaccacttcatttgctccacacatctttgttattcattgttgtgatt--ttgtctgaattcacaaca 154  Q
    ||||||||| ||||| ||||||||||||||||||||  ||||||| |||| ||  ||||| ||||||||||||    
T  17345735 attgattactacttcctttgctccacacatctttgt--ttcattggtgtggtttcttgtccgaattcacaaca 17345805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 3e-51; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 49091618 - 49091472
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| ||||||||||||||||||||||| |||||  ||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  49091618 gattatgcttgtggtgttgctctacacttaaatctaggtctgtttttgttgttgttgcttggagacactttatctattgattaccacttcctttgctcca 49091519  T
Q  109 cacatctttgttattcattgttgtgattttgt-ctgaattcacaaca 154  Q
    |||||||||||||||||||| ||||||||||| | ||||||||||||    
T  49091518 cacatctttgttattcattggtgtgattttgtaccgaattcacaaca 49091472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 29159759 - 29159613
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctcc 107  Q
    |||||| |||||||||||||||||||||||||| ||  ||| |||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||    
T  29159759 gattatgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgttgcttggagacactttatctattgattaccacttccctttgctcc 29159660  T
Q  108 acacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||||    
T  29159659 acacatctttgttattcattggtgtgattttgtacgaattcacaaca 29159613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 20284045 - 20283900
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||||||||||||||||||||||| ||  ||| |||||||||||||| ||||||||||||||||| |||||||| |||||| |||||||||    
T  20284045 gattatgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgtttcttggagacactttatccattgattatcacttcttttgctcca 20283946  T
Q  109 cacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    |||||||||||||||||| | |||||||||||| ||||||||||||    
T  20283945 cacatctttgttattcataggtgtgattttgtccgaattcacaaca 20283900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 46516451 - 46516597
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttt-tgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcc 107  Q
    |||||| ||| |||||||||| ||||||||||| ||| ||| |||| ||||||||||| |||||||||||||||| ||||||||||||||| ||||||||    
T  46516451 gattatgcttttggtgttgctttacacttagatttaagtctgttttttgttgttgttgtttggagacactttatctattgattaccacttcctttgctcc 46516550  T
Q  108 acacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||    
T  46516551 acacatctttgttattcattggtgtgattttgtccgaattcacaaca 46516597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 23403154 - 23403299
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| ||||||||||||||||||||||| || ||  ||| ||||||||||||||||||||| |||||||||| |||||||| |||||| |||||||||    
T  23403154 gattatgcttgtggtgttgctctacacttacatttaggtctgtttttgttgttgttgcttggaaacactttatccattgattatcacttcctttgctcca 23403253  T
Q  109 cacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    |||||||||||||||||||| | |||||||||| ||||||||||||    
T  23403254 cacatctttgttattcattggtatgattttgtccgaattcacaaca 23403299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 9235696 - 9235843
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatcta--actctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctc 106  Q
    |||||| ||||||||||||||||||| |||||| ||   || | |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  9235696 gattatgcttgtggtgttgctctacatttagatttaggtctgtttttttgttgttgttgcttggagacactttatccattgattaccacttcctttgctc 9235795  T
Q  107 cacacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||||||||||| |||| |||||||||||| ||||||||||||    
T  9235796 cacacatctttgttatttattggtgtgattttgtccgaattcacaaca 9235843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 4796808 - 4796953
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactc---tatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgct 105  Q
    |||||| |||||||||||||||||||||||||| ||  ||   | ||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||    
T  4796808 gattatgcttgtggtgttgctctacacttagatttaggtctgttttttttgttgttgttgcttggagaaactttatctattgattaccacttcctttgct 4796907  T
Q  106 ccacacatctttgttattcattgttgtgattttgtctgaattcaca 151  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||    
T  4796908 ccacacatctttgttattcattggtgtgattttgtccgaattcaca 4796953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 33332591 - 33332734
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| ||| |||||||||||||||||||||| ||  | | ||||||||||||||| ||||| |||||||||| ||||||||||||||| |||| ||||    
T  33332591 gattatgcttatggtgttgctctacacttagatttaggtttgtttttgttgttgttgtttggatacactttatctattgattaccacttcctttggtcca 33332690  T
Q  109 cacatctttgttattcattgttgtgattttgtctgaattcacaa 152  Q
    |||||||| ||||||||||| |||||||||||| ||||||||||    
T  33332691 cacatcttggttattcattggtgtgattttgtccgaattcacaa 33332734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 11 - 154
Target Start/End: Original strand, 9190151 - 9190294
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccac 109  Q
    |||| |||||||||||||||||||||||||||||  | |  |||||||||||||||||||||||||||||   |||||||||||||| | ||||||||||    
T  9190151 ttatgcttgtggtgttgctctacacttagatctaggt-ttgttttgttgttgttgcttggagacactttacacattgattaccacttccttttgctccac 9190249  T
Q  110 acatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||||| ||||||| |||||||||| | ||||||||||||    
T  9190250 acatctttgtttttcattggtgtgattttgaccgaattcacaaca 9190294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 154
Target Start/End: Original strand, 9185306 - 9185449
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccac 109  Q
    |||| ||||||||||| |||||||||||||||||  ||| |||| |||||||||||||||||||||||||   |||||||||||||| | ||||||||||    
T  9185306 ttatgcttgtggtgtttctctacacttagatctaggtctgtttt-gttgttgttgcttggagacactttacacattgattaccacttccttttgctccac 9185404  T
Q  110 acatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||||| ||||||  |||||||||| | ||||||||||||    
T  9185405 acatctttgtttttcattagtgtgattttgaccgaattcacaaca 9185449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 35960762 - 35960641
Alignment:
Q  19 gtggtgttgctctacacttagatctaactctatttt--tgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatctt 116  Q
    |||||||| |||||||||||||| ||   || ||||  ||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  35960762 gtggtgtttctctacacttagatttaggcctgttttgttgttgttgttgcttggaaacactttatctattgattaccacttcctttgctccacacatctt 35960663  T
Q  117 tgttattcattgttgtgatttt 138  Q
    |||| ||||||| |||||||||    
T  35960662 tgtttttcattggtgtgatttt 35960641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 136
Target Start/End: Complemental strand, 47263632 - 47263509
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccaca 110  Q
    |||| ||||||||||||||||||||| ||| |||  |||||||||||| |||||||||||||||||||||   ||||||||||||||| ||||||||||     
T  47263632 ttatgcttgtggtgttgctctacact-aga-ctaggtctatttttgtttttgttgcttggagacactttacacattgattaccacttcctttgctccacg 47263535  T
Q  111 catctttgttattcattgttgtgatt 136  Q
    |||||||||| ||||||| |||||||    
T  47263534 catctttgtttttcattggtgtgatt 47263509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 2479286 - 2479168
Alignment:
Q  16 cttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatct 115  Q
    ||||||||||||||||||||| ||| |||  ||| |||||||||||||||||| |||||||||||   ||||||||||||||| ||||||||||||||||    
T  2479286 cttgtggtgttgctctacact-aga-ctaggtctgtttttgttgttgttgcttagagacactttacacattgattaccacttcctttgctccacacatct 2479189  T
Q  116 ttgttattcattgttgtgatt 136  Q
    ||||| ||||||| |||||||    
T  2479188 ttgtttttcattggtgtgatt 2479168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 154
Target Start/End: Complemental strand, 2580341 - 2580199
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccac 109  Q
    |||| ||||||||||  |||||||||||||| ||  ||| |||| |||||||||||||| ||||||||||   |||||||||||||| | ||||||||||    
T  2580341 ttatacttgtggtgtatctctacacttagatttaggtctgtttt-gttgttgttgcttgaagacactttacacattgattaccacttccttttgctccac 2580243  T
Q  110 acatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||||| | ||||| |||||||||||| ||||||||||||    
T  2580242 acatctttgtt-tacattggtgtgattttgtccgaattcacaaca 2580199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 55852 - 55764
Alignment:
Q  52 ttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatctttgttattcattgttgtgattttgt 140  Q
    |||| ||||||||||||||||||||||||   ||||||||||||||| ||| || |||||||||||||||||||||| |||||||||||    
T  55852 ttttattgttgttgcttggagacactttacacattgattaccacttcctttacttcacacatctttgttattcattggtgtgattttgt 55764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 2647837 - 2647949
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttt-tgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcc 107  Q
    |||||| ||||||||||||||||| |||||||| ||  ||| |||| ||||||||||| ||||||| | |||||| ||||||||||| ||| ||||||||    
T  2647837 gattatgcttgtggtgttgctctaaacttagatttaggtctgttttttgttgttgttgtttggagatattttatctattgattaccatttcctttgctcc 2647936  T
Q  108 acacatctttgtt 120  Q
    |||||||||||||    
T  2647937 acacatctttgtt 2647949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 138
Target Start/End: Complemental strand, 21983194 - 21983109
Alignment:
Q  53 tttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatctttgttattcattgttgtgatttt 138  Q
    ||||||||||||||||||||| ||||||   ||||||||||||||||||||||||| ||||| ||||| ||||||| |||||||||    
T  21983194 tttgttgttgttgcttggagatactttacacattgattaccacttcatttgctccatacatcattgtttttcattggtgtgatttt 21983109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 3047162 - 3047063
Alignment:
Q  54 ttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatctttgttattcattgttgtgattttgtctgaattcacaac 153  Q
    ||||||||||||||||  |||||||||   |||||||| |||||  ||||||||||||||||||||| ||||||| |||||||||||| |||||||||||    
T  3047162 ttgttgttgttgcttgaggacactttactcattgattatcactttctttgctccacacatctttgtt-ttcattggtgtgattttgtccgaattcacaac 3047064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 138
Target Start/End: Complemental strand, 21988818 - 21988733
Alignment:
Q  53 tttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatctttgttattcattgttgtgatttt 138  Q
    |||||||||||||||||| |||||||||   ||||||||||||||| ||||||||||||||| || || ||||||| |||||||||    
T  21988818 tttgttgttgttgcttggtgacactttacacattgattaccacttcctttgctccacacatcattatttttcattggtgtgatttt 21988733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 2647962 - 2648013
Alignment:
Q  103 gctccacacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2647962 gctccacacatctttgttattcattggtgtgattttgtctgaattcacaaca 2648013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 136
Target Start/End: Original strand, 44848868 - 44848953
Alignment:
Q  51 tttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatctttgttattcattgttgtgatt 136  Q
    |||||||||||||||||||||||||||||    |||||||| |||| | ||||||||||||||| ||||| ||||||| |||||||    
T  44848868 tttttgttgttgttgcttggagacactttgcacattgattagcactacctttgctccacacatccttgtttttcattggtgtgatt 44848953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 18413590 - 18413453
Alignment:
Q  16 cttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatc 114  Q
    ||||||||||||||||||||| ||| |||   || ||||||||||||||||||||||||||||||   || ||||||||||| | |||||||| ||||||    
T  18413590 cttgtggtgttgctctacact-aga-ctagggctgtttttgttgttgttgcttggagacactttacacatagattaccacttccttttgctcctcacatc 18413493  T
Q  115 tttgttattcattgttgtga-ttttgtctgaattcacaaca 154  Q
    |||||| | ||||| ||||| |||| || ||||||||||||    
T  18413492 tttgtt-tacattggtgtgagttttatccgaattcacaaca 18413453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 18408712 - 18408576
Alignment:
Q  17 ttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatct 115  Q
    |||||||||||||||||||| ||| |||   || |||||||||||||||| |||||||||||||   || ||||||||||| | ||||||||||||||||    
T  18408712 ttgtggtgttgctctacact-aga-ctacggctgtttttgttgttgttgcgtggagacactttacacatagattaccacttccttttgctccacacatct 18408615  T
Q  116 ttgttattcattgttgtga-ttttgtctgaattcacaaca 154  Q
    ||||| | ||||| ||||| |||| || ||||||||||||    
T  18408614 ttgtt-tacattggtgtgagttttatccgaattcacaaca 18408576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 21639758 - 21639654
Alignment:
Q  15 tcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccact-tcatttgctccacacat 113  Q
    |||||||||||||||||||||| ||| |||   || ||||||||||||||||||||||||||||||   || ||||||||||  | ||||||||||||||    
T  21639758 tcttgtggtgttgctctacact-aga-ctagggctgtttttgttgttgttgcttggagacactttactcatagattaccactcccttttgctccacacat 21639661  T
Q  114 ctttgtt 120  Q
    |||||||    
T  21639660 ctttgtt 21639654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 21645956 - 21645852
Alignment:
Q  15 tcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccact-tcatttgctccacacat 113  Q
    |||||||||||||||||||||| ||| |||   || ||||||||||||||||||||||||||||||   || ||||||||||  | ||||||||||||||    
T  21645956 tcttgtggtgttgctctacact-aga-ctagggctgtttttgttgttgttgcttggagacactttactcatagattaccactcccttttgctccacacat 21645859  T
Q  114 ctttgtt 120  Q
    |||||||    
T  21645858 ctttgtt 21645852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 28617444 - 28617512
Alignment:
Q  84 attgattaccacttcatttgctccacacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||||||||| ||||||||||||||||||||  || |||  |||||||||||| ||||||||||||    
T  28617444 attgattaccacttcctttgctccacacatctttgt--ttgattaatgtgattttgtccgaattcacaaca 28617512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 1e-50; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 48438170 - 48438025
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||| |||||||| ||||||||||| ||| |||||||||    
T  48438170 gattatgcttgtggtgttgctctacacttagatctaggtctgtttttgttgttgttgcttggagatactttatctattgattaccatttcctttgctcca 48438071  T
Q  109 cacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    |||||| ||||||||||||| |||||||||||| ||||||||||||    
T  48438070 cacatccttgttattcattgatgtgattttgtccgaattcacaaca 48438025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 11 - 138
Target Start/End: Complemental strand, 36029059 - 36028932
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccaca 110  Q
    |||| ||||||||||||||||| |||||||||||  ||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||    
T  36029059 ttatgcttgtggtgttgctctatacttagatctaggtctgtttttgttgttgttgcttggagacactttacacattgattaccacttcatttgctccaca 36028960  T
Q  111 catctttgttattcattgttgtgatttt 138  Q
    |||||||||||||||||| |||||||||    
T  36028959 catctttgttattcattggtgtgatttt 36028932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 3716133 - 3716279
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctcc 107  Q
    |||||| |||||||||||||||||||||||||| ||  ||| ||||||||||||||||||| |||||||||||| |||||||||||||| | ||||||||    
T  3716133 gattatgcttgtggtgttgctctacacttagatttatgtctgtttttgttgttgttgcttgtagacactttatctattgattaccacttccttttgctcc 3716232  T
Q  108 acacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||||||||||||||| |||||||||||   |||||||||||    
T  3716233 acacatctttgttattcattggtgtgattttgtacaaattcacaaca 3716279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 27026901 - 27026772
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||||||||||||||||||||||||||  ||| ||||| ||||||||||||||||||||||||   ||||||||||| |||||||||||||    
T  27026901 gattatgcttgtggtgttgctctacacttagatctaggtctgtttttcttgttgttgcttggagacactttacacattgattaccatttcatttgctcca 27026802  T
Q  109 cacatctttgttattcattgttgtgatttt 138  Q
    |||||||||||||||||||| |||||||||    
T  27026801 cacatctttgttattcattggtgtgatttt 27026772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 40844608 - 40844464
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| ||||| |||||||||||||||||||| ||  | | |||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||    
T  40844608 gattatgcttgtagtgttgctctacacttagatttaggtttgtttttgttgttgttgcttggagacactttatctattgattaccacttcttttactcca 40844509  T
Q  109 cacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    |||||||||||||||||||| ||| |||||||| ||||||||||||    
T  40844508 cacatctttgttattcattg-tgtaattttgtccgaattcacaaca 40844464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 40592914 - 40593063
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||||||||||||||||||||||| ||  ||| ||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||    
T  40592914 gattatgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgttgcttggagacattttatccattgattaccacttcctttgctcca 40593013  T
Q  109 cacatct---ttgttattcattgttgtgattttg-tctgaattcacaaca 154  Q
    |||||||   ||||||||||||| |||||||||| || ||||||||||||    
T  40593014 cacatctttgttgttattcattggtgtgattttgttccgaattcacaaca 40593063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 27038246 - 27038100
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||||||||||||||||||||||||||  ||| ||||||||||||||||||| ||||||||||   ||||||||||| |||||||||||||    
T  27038246 gattatgcttgtggtgttgctctacacttagatctagatctgtttttgttgttgttgcttgaagacactttacacattgattaccatttcatttgctcca 27038147  T
Q  109 cacatctttgttattcattgttgtgattttgt-ctgaattcacaaca 154  Q
    |||||||| ||||||||||| ||||||||| | | ||||||||||||    
T  27038146 cacatcttagttattcattggtgtgattttttaccgaattcacaaca 27038100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 30709922 - 30710051
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| ||| ||||||||||||| |||||||||||  ||| ||||||||||||||||||||||||||||||   ||||||||||||||| |||||||||    
T  30709922 gattatgcttatggtgttgctctaaacttagatctaggtctgtttttgttgttgttgcttggagacactttacacattgattaccacttcctttgctcca 30710021  T
Q  109 cacatctttgttattcattgttgtgatttt 138  Q
    |||||||||||||||||||| |||||||||    
T  30710022 cacatctttgttattcattggtgtgatttt 30710051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 24695295 - 24695439
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||| |||||||||| |||||||| || |||| ||||||||||||||||||| ||||| |||||| ||||||||||||||| |||||||||    
T  24695295 gattatgcttgtg-tgttgctctatacttagatttagctctgtttttgttgttgttgcttgaagacattttatctattgattaccacttcctttgctcca 24695393  T
Q  109 cacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||| |||||||||  |||||||||||  ||||||||||||    
T  24695394 cacatctttattattcatttgtgtgattttgtacgaattcacaaca 24695439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 47924010 - 47924146
Alignment:
Q  16 cttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatct 115  Q
    |||||||||||||||||||||||||||||  ||| |||||||   |||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
T  47924010 cttgtggtgttgctctacacttagatctaggtctgtttttgt---tgttgcttggagacactttatccattgattaccacttcctttactccacacatct 47924106  T
Q  116 ttgttattcattgttgtgattttgt-ctgaattcacaaca 154  Q
    ||||||||||||| |||||||| || | ||||||||||||    
T  47924107 ttgttattcattggtgtgatttagtaccgaattcacaaca 47924146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 6794844 - 6794988
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||| || | |||||||||||||| ||  ||| |||| |||||||||||||||||||||||| || ||||||||||||||| |||||||||    
T  6794844 gattatgcttgtgatgctactctacacttagatttaggtctgtttt-gttgttgttgcttggagacactttttctattgattaccacttcctttgctcca 6794942  T
Q  109 cacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    |||||| ||||| ||||||| |||||||||||| ||||||||||||    
T  6794943 cacatcgttgtttttcattggtgtgattttgtccgaattcacaaca 6794988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 8370618 - 8370747
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||   |||||||||| |||| ||| |||||    
T  8370618 gattatgcttgtggtgttgctctacacttagatctaggtctgtttttgttgttgttgcttggagacactttacacattgattacctcttcctttactcca 8370717  T
Q  109 cacatctttgttattcattgttgtgatttt 138  Q
    ||||||||| || ||||||| |||||||||    
T  8370718 cacatctttatttttcattgatgtgatttt 8370747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 26298944 - 26298792
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgct------tggagacactttatcaattgattaccacttcattt 102  Q
    |||||| |||||||||||||||||||||||||| ||  ||| ||||||||||||||| |      ||||||||||||||| ||||||||||||||| |||    
T  26298944 gattatgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgttgttgttgtttggagacactttatccattgattaccacttccttt 26298845  T
Q  103 gctccacacatctttgttattcattgttgtgattttg-tctgaattcacaaca 154  Q
    | |||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  26298844 gatccacacatctttgttattcattggtgtgattttgttctgaactcacaaca 26298792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 141
Target Start/End: Original strand, 1417621 - 1417752
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctat-ttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcc 107  Q
    |||||| |||||| |||| |||||||||||||| ||  | ||| |||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||    
T  1417621 gattatgcttgtgatgttactctacacttagattta--tgtatgttttgttgttgttgcttgaagacactttatctattgattaccacttcctttgctcc 1417718  T
Q  108 acacatctttgttattcattgttgtgattttgtc 141  Q
    ||||||||||||| ||||||| ||||||||||||    
T  1417719 acacatctttgtttttcattggtgtgattttgtc 1417752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 51 - 154
Target Start/End: Complemental strand, 47649655 - 47649551
Alignment:
Q  51 tttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatctttgttattcattgttgtgattttgtctgaattca 149  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| | |||| |||||||||||||||||||||||| |||||||||||  |||||||    
T  47649655 tttttgttgttgttgcttggagacactttatctattgattaccacttccttttgttccacacatctttgttattcattggtgtgattttgtacgaattca 47649556  T
Q  150 caaca 154  Q
    |||||    
T  47649555 caaca 47649551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 17 - 140
Target Start/End: Complemental strand, 16264297 - 16264174
Alignment:
Q  17 ttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatctt 116  Q
    ||||||||||||||||||||||||||||    | |||||||||||||| |||||||||||||||   |||||||||||||||  ||||||||||| ||||    
T  16264297 ttgtggtgttgctctacacttagatctaggattgtttttgttgttgtttcttggagacactttacacattgattaccacttctgttgctccacacgtctt 16264198  T
Q  117 tgttattcattgttgtgattttgt 140  Q
    |||||||||||| |||||||||||    
T  16264197 tgttattcattggtgtgattttgt 16264174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 155
Target Start/End: Complemental strand, 1417221 - 1417075
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||| || | |||||||||||||| ||  ||| |||| |||||||||||||||||||||||||   ||||||||||||||| ||| |||||    
T  1417221 gattatgcttgtgatgctactctacacttagatttaggtctgtttt-gttgttgttgcttggagacactttacacattgattaccacttcctttactcca 1417123  T
Q  109 cacatctttgttattcattgttgtgattttgt-ctgaattcacaacac 155  Q
    ||||||||| |||||||||| ||||||||||| | |||||||||||||    
T  1417122 cacatctttattattcattggtgtgattttgtccggaattcacaacac 1417075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 35925438 - 35925309
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||||||||||||||||||||||||||  ||| |||||||||||||| |||||||||| ||||   |||||||||||| |  |||||||||    
T  35925438 gattatgcttgtggtgttgctctacacttagatctaggtctgtttttgttgttgttacttggagacattttacacattgattaccacctgctttgctcca 35925339  T
Q  109 cacatctttgttattcattgttgtgatttt 138  Q
    || ||||||||| ||||||| |||| ||||    
T  35925338 catatctttgtttttcattggtgtggtttt 35925309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 8126648 - 8126512
Alignment:
Q  18 tgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatcttt 117  Q
    |||||||||||||||||||||||| ||  | | ||||||||||||||| ||||||||| | |||| ||||| ||||||||| ||||||||||||||||||    
T  8126648 tgtggtgttgctctacacttagatttaggtatgtttttgttgttgttggttggagacattgtatctattgaataccacttcctttgctccacacatcttt 8126549  T
Q  118 gttattcattgttgtgattttgtctgaattcacaaca 154  Q
    |||||| |||| | |||| || ||  |||||||||||    
T  8126548 gttatttattggtatgatattatccaaattcacaaca 8126512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 67 - 154
Target Start/End: Original strand, 3323752 - 3323839
Alignment:
Q  67 ttggagacactttatcaattgattaccacttcatttgctccacacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||  ||||||||||||    
T  3323752 ttggagacactttatgcattgattaccacttcctttgctccacacatctttgttattcattggtgtgattttgtacgaattcacaaca 3323839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 56 - 154
Target Start/End: Original strand, 18554465 - 18554563
Alignment:
Q  56 gttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    |||||||||| ||||||| | |||||| ||| ||||||||||  ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  18554465 gttgttgttgtttggagatattttatctattaattaccactttctttgctccacacatctttgttattcattggtgtgattttgtccgaattcacaaca 18554563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 37466247 - 37466102
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||  |||||||||||||||||||  |  ||| ||||| || || ||  |||||||||||| ||| ||||||||||| ||| ||||||||     
T  37466247 gattatgcttgtaatgttgctctacacttagattaatgtctgttttttttttttttttttggagacacttaatccattgattaccatttcctttgctcct 37466148  T
Q  109 cacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||||||||| |||| |||||||||||| ||||||||||||    
T  37466147 cacatctttgttatttattggtgtgattttgtccgaattcacaaca 37466102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 39040126 - 39040271
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccaca 110  Q
    |||| ||||||||||||||||||||| || ||||  |||  |||||||||||||||||||||||||||||   ||||||||||||||| |||| ||||||    
T  39040126 ttatgcttgtggtgttgctctacactaag-tctaggtct-gttttgttgttgttgcttggagacactttacacattgattaccacttcctttgttccaca 39040223  T
Q  111 catctttgttattcattgttgtgattttgt--ctgaattcacaacaca 156  Q
    ||||||| ||||| |||| ||||||||| |  | ||||||||||||||    
T  39040224 catctttattatttattggtgtgattttttaccggaattcacaacaca 39040271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 27986584 - 27986722
Alignment:
Q  16 cttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatc 114  Q
    ||||||||||||||||||||| ||| |||  ||||||||||||||||||||||| ||||||||||   || ||||||||||| | ||||||||| |||||    
T  27986584 cttgtggtgttgctctacact-aga-ctaggtctatttttgttgttgttgcttgaagacactttacacatagattaccacttccttttgctccatacatc 27986681  T
Q  115 tttgttattcattgttgtgattttgtctgaattcacaacaca 156  Q
    |||||| | ||||| ||||| |||||| ||||||||||||||    
T  27986682 tttgtt-tacattggtgtgagtttgtccgaattcacaacaca 27986722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 21711137 - 21711064
Alignment:
Q  51 tttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatctttgttattcatt 127  Q
    |||||||||||||||||||||||||||||||| |||   ||||||||| ||||||||||||||||||||||||||||    
T  21711137 tttttgttgttgttgcttggagacactttatctatt---taccacttcctttgctccacacatctttgttattcatt 21711064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 32143270 - 32143133
Alignment:
Q  16 cttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatc 114  Q
    ||||||||||||||||||||| ||| |||  ||| ||||||||||||||||||||||||||||||   || ||||||||||| | |||||||||||||||    
T  32143270 cttgtggtgttgctctacact-aga-ctaggtctgtttttgttgttgttgcttggagacactttacacatagattaccacttccttttgctccacacatc 32143173  T
Q  115 tttgttattcattgttgtga-ttttgtctgaattcacaaca 154  Q
    |||||| | ||||| ||||| |||| || ||||||||||||    
T  32143172 tttgtt-tacattggtgtgagttttatccgaattcacaaca 32143133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 154
Target Start/End: Original strand, 33386800 - 33386942
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactctatttt-tgttgttgttgcttggagacactttatcaattgattaccactt-catttgctcca 108  Q
    |||| ||||||||||||||||||||| ||| |||  ||| |||| ||||||||||||||||||||||||||   |||||||||||||| | ||| |||||    
T  33386800 ttatacttgtggtgttgctctacact-aga-ctaggtctgttttttgttgttgttgcttggagacactttacacattgattaccacttccttttactcca 33386897  T
Q  109 cacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    |||||||||||| | ||||| ||||| |||||| | ||||||||||    
T  33386898 cacatctttgtt-tacattggtgtgagtttgtccggattcacaaca 33386942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 1305898 - 1305761
Alignment:
Q  16 cttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttc-atttgctccacacatc 114  Q
    ||||||||||||||||||||| ||| |||   || ||||||||||||||||||||||||||||||   || ||||||||||||  |||||||||||||||    
T  1305898 cttgtggtgttgctctacact-aga-ctagggctgtttttgttgttgttgcttggagacactttacacatagattaccacttctttttgctccacacatc 1305801  T
Q  115 tttgttattcattgttgtga-ttttgtctgaattcacaaca 154  Q
    |||||| | ||||| ||||| |||| || ||||||||||||    
T  1305800 tttgtt-tacattggtgtgagttttatccgaattcacaaca 1305761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 3328487 - 3328558
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacacttta 80  Q
    |||||| |||||||||||||||||||||||||| ||  ||| |||||||||||||| |||||||||||||||    
T  3328487 gattatgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgtttcttggagacacttta 3328558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 1309803 - 1309668
Alignment:
Q  16 cttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatc 114  Q
    ||||||||||||||||||||| ||| |||   || ||||||||||||||||||| ||||||||||   || ||||||||||| | |||||||||||||||    
T  1309803 cttgtggtgttgctctacact-aga-ctagggctgtttttgttgttgttgcttgaagacactttacacatagattaccacttccttttgctccacacatc 1309706  T
Q  115 tttgttattcattgttgtga-ttttgtctgaattcacaa 152  Q
    |||||| | ||||| ||||| |||| || ||||||||||    
T  1309705 tttgtt-tacattggtgtgagttttatccgaattcacaa 1309668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 155
Target Start/End: Original strand, 25929635 - 25929700
Alignment:
Q  90 taccacttcatttgctccacacatctttgttattcattgttgtgattttgtctgaattcacaacac 155  Q
    ||||||||| |||  |||||||||||||||||||  |||||||||||||||| |||||||||||||    
T  25929635 taccacttcctttattccacacatctttgttattagttgttgtgattttgtccgaattcacaacac 25929700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 27452870 - 27452770
Alignment:
Q  54 ttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatctttgttattcattgttgtgattttgtctgaattcacaa 152  Q
    |||||||||||||||||||||||||||   || ||||||||||| | ||||||||||||||||||||| | ||||| ||| | |||||| |||||| |||    
T  27452870 ttgttgttgttgcttggagacactttacacatagattaccacttccttttgctccacacatctttgtt-tacattggtgttagtttgtccgaattctcaa 27452772  T
Q  153 ca 154  Q
    ||    
T  27452771 ca 27452770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 27975085 - 27975191
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccaca 110  Q
    |||| ||||||||||||||||||||| |||| ||  ||| |||| | |||||||||||||||||||||||   |||||||| |||||| ||| |||||||    
T  27975085 ttatgcttgtggtgttgctctacact-agat-taggtctgtttt-gctgttgttgcttggagacactttacacattgattatcacttcctttactccaca 27975181  T
Q  111 catctttgtt 120  Q
     |||||||||    
T  27975182 tatctttgtt 27975191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 155
Target Start/End: Original strand, 4387239 - 4387308
Alignment:
Q  84 attgattaccacttcatttgctccacacatctttgttattcattgttgtgattttgtctgaattcacaacac 155  Q
    ||||||||| ||||| ||||||||||||||||||||  ||||||| |||||||||||  ||||| |||||||    
T  4387239 attgattactacttcctttgctccacacatctttgt--ttcattgctgtgattttgtaggaattaacaacac 4387308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 154
Target Start/End: Original strand, 3328561 - 3328601
Alignment:
Q  114 ctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||||||||| |||||||||||  ||||||||||||    
T  3328561 ctttgttattcattgatgtgattttgtacgaattcacaaca 3328601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 84; Significance: 6e-40; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 2448 - 2317
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctcca 108  Q
    |||||| |||||||||||| ||||||||||||||||  ||| |||||||||||||||||||||||||||||||| |||||| | |||||| |||||||||    
T  2448 gattatgcttgtggtgttgttctacacttagatctaggtctgtttttgttgttgttgcttggagacactttatctattgatcaacacttcctttgctcca 2349  T
Q  109 cacatctttgttattcattgttgtgattttgt 140  Q
    |||||||||||||||| | | |||||||||||    
T  2348 cacatctttgttattcttcggtgtgattttgt 2317  T

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Target: scaffold0006; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 5639 - 5491
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgct---tggagacactttatcaattgattaccacttcatttgct 105  Q
    |||||| ||||||||||| |||||||||||||||||  ||| ||||||||||||||| |   ||||||||||| | | ||||||||||||||| ||| ||    
T  5639 gattatgcttgtggtgtttctctacacttagatctaggtctgtttttgttgttgttgttgtttggagacacttaa-ctattgattaccacttcctttact 5541  T
Q  106 ccacacatctttgttattcattgttgtgattttgtctga-attcacaaca 154  Q
    ||||||||||||||||||||||| ||||||||||||| | ||||||||||    
T  5540 ccacacatctttgttattcattggtgtgattttgtctcagattcacaaca 5491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 57 - 154
Target Start/End: Original strand, 133469 - 133566
Alignment:
Q  57 ttgttgttgcttggagacactttatcaattgattaccacttcattt-gctccacacatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||| ||||||||||||||   |||||||| |||||| ||| |||||||||||||||||| | ||||| |||||||||||| ||||||||||||    
T  133469 ttgttgttgtttggagacactttacacattgattatcacttccttttgctccacacatctttgtt-tacattggtgtgattttgtccgaattcacaaca 133566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 154
Target Start/End: Complemental strand, 17218 - 17077
Alignment:
Q  10 attattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccac 109  Q
    ||||| ||||||||||||||||| |||||||| ||  | | ||||||||||||||   |||||||| |||||| ||||||||||||||| ||||||||||    
T  17218 attatgcttgtggtgttgctctatacttagatttaggtatgtttttgttgttgtt---tggagacattttatctattgattaccacttcctttgctccac 17122  T
Q  110 acatctttgttattcattgttgtgattttgtctgaattcacaaca 154  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||    
T  17121 acatctttgttattcattcatgtgattttgtccgaattcacaaca 17077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 157
Target Start/End: Complemental strand, 10685 - 10535
Alignment:
Q  9 gattattcttgtggtgttgctctacacttagatctaactctattttt-gttgttgttgcttggagacactttatcaattgattaccacttcattt-gctc 106  Q
    |||||| |||||||||||||||||||||||||| ||  ||| ||||| |||||||||||||||||  |||||||| || |||||||||||| ||| ||||    
T  10685 gattatgcttgtggtgttgctctacacttagatttaggtctgttttttgttgttgttgcttggagtaactttatctatcgattaccacttctttttgctc 10586  T
Q  107 cacacatctttgttattcattgttgtgattttgtctgaattcacaacacaa 157  Q
    |||||||||||||||||||||| |||||||||||  |||| ||||||||||    
T  10585 cacacatctttgttattcattggtgtgattttgtacgaatacacaacacaa 10535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 136
Target Start/End: Original strand, 44104 - 44227
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccaca 110  Q
    |||| ||||||||||||||||||||| |||| ||  ||| ||||||||||||||||||||||||||||||   ||||||||||||||| |||||||||||    
T  44104 ttatgcttgtggtgttgctctacact-agat-taggtctgtttttgttgttgttgcttggagacactttacacattgattaccacttcctttgctccaca 44201  T
Q  111 catctttgttattcattgttgtgatt 136  Q
    |||||||||| ||||||| |||||||    
T  44202 catctttgtttttcattggtgtgatt 44227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 11 - 138
Target Start/End: Original strand, 36976 - 37102
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccaca 110  Q
    |||| |||||||||||| |||||||  || ||||  ||| ||||||||||||||||||||||||||||||   ||||||||||||||| |||||||||||    
T  36976 ttatacttgtggtgttggtctacaccaag-tctaggtctgtttttgttgttgttgcttggagacactttacacattgattaccacttcctttgctccaca 37074  T
Q  111 catctttgttattcattgttgtgatttt 138  Q
    |||||||||| ||||| | |||||||||    
T  37075 catctttgtttttcatcggtgtgatttt 37102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 138
Target Start/End: Complemental strand, 85638 - 85512
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccaca 110  Q
    |||| |||||| ||||||||||||||||||||||  ||| ||||  ||||||||||||||||||||||||   ||||||||||||||| ||||||| |||    
T  85638 ttatgcttgtgatgttgctctacacttagatctaggtctgtttta-ttgttgttgcttggagacactttacacattgattaccacttcctttgctctaca 85540  T
Q  111 catctttgttattcattgttgtgatttt 138  Q
    |||||||||| ||||||| |||||||||    
T  85539 catctttgtttttcattggtgtgatttt 85512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 45201 - 45100
Alignment:
Q  17 ttgtggtgttgctctacacttagatctaactctatttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatctt 116  Q
    |||||||||||||||||||| ||| ||   ||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  45201 ttgtggtgttgctctacact-aga-cttggtctgtttttgttgttgttgcttggagacactttacacattgattaccacttcatttgctccacacatctt 45104  T
Q  117 tgtt 120  Q
    ||||    
T  45103 tgtt 45100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1805 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold1805
Description:

Target: scaffold1805; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 51 - 138
Target Start/End: Complemental strand, 1322 - 1234
Alignment:
Q  51 tttttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatctttg-ttattcattgttgtgatttt 138  Q
    ||||||||||||||||||||||||||||||   ||||||||||||||| ||||||||||||||||||| || ||||||| |||||||||    
T  1322 tttttgttgttgttgcttggagacactttacacattgattaccacttcctttgctccacacatctttgttttttcattggtgtgatttt 1234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 18134 - 18204
Alignment:
Q  51 tttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatctttgtt 120  Q
    ||||||||||||||||||||||||||||||   || ||||||||||| | |||||||||||||||||||||    
T  18134 tttttgttgttgttgcttggagacactttacacatagattaccacttccttttgctccacacatctttgtt 18204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 24227 - 24297
Alignment:
Q  51 tttttgttgttgttgcttggagacactttatcaattgattaccactt-catttgctccacacatctttgtt 120  Q
    ||||||||||||||||||||||||||||||   || ||||||||||| | |||||||||||||||||||||    
T  24227 tttttgttgttgttgcttggagacactttacacatagattaccacttccttttgctccacacatctttgtt 24297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 8563 - 8670
Alignment:
Q  11 ttattcttgtggtgttgctctacacttagatctaactctatttt-tgttgttgttgcttggagacactttatcaattgattaccactt-catttgctcca 108  Q
    |||| ||||||||||||||||||||| ||| |||  ||| |||| ||||||| ||||||||||||||||||   |||||||||||||| | |||||||||    
T  8563 ttatacttgtggtgttgctctacact-aga-ctaggtctgttttttgttgttattgcttggagacactttacacattgattaccacttccttttgctcca 8660  T
Q  109 cacatctttg 118  Q
    ||||||||||    
T  8661 cacatctttg 8670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 154
Target Start/End: Original strand, 29676 - 29777
Alignment:
Q  54 ttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatctttgttattcattgttgtga-ttttgtctgaattcacaa 152  Q
    |||||||||||| |||  || ||||||   ||||||||||||||| |||||| ||||||| |||||| ||||||| ||||| ||||| | ||||||||||    
T  29676 ttgttgttgttggttgaggatactttactcattgattaccacttcctttgcttcacacatttttgtttttcattggtgtgatttttgaccgaattcacaa 29775  T
Q  153 ca 154  Q
    ||    
T  29776 ca 29777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 43168 - 43067
Alignment:
Q  54 ttgttgttgttgcttggagacactttatcaattgattaccacttcatttgctccacacatctttgttattcattgttgtga-ttttgtctgaattcacaa 152  Q
    |||||||||||| |||  || ||||||   ||||||||||||||| |||||| ||||||| |||||| ||||||| ||||| ||||| | ||||||||||    
T  43168 ttgttgttgttggttgaggatactttactcattgattaccacttcctttgcttcacacatttttgtttttcattggtgtgatttttgaccgaattcacaa 43069  T
Q  153 ca 154  Q
    ||    
T  43068 ca 43067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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