View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18844_low_1 (Length: 752)

Name: NF18844_low_1
Description: NF18844
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18844_low_1
NF18844_low_1
[»] chr2 (21 HSPs)
chr2 (14-658)||(6996067-6996720)
chr2 (431-498)||(44255969-44256037)
chr2 (307-370)||(44256116-44256179)
chr2 (309-370)||(769514-769575)
chr2 (309-370)||(1583338-1583399)
chr2 (309-370)||(33188795-33188856)
chr2 (431-496)||(41585340-41585405)
chr2 (431-497)||(1583478-1583545)
chr2 (431-493)||(2924991-2925054)
chr2 (431-497)||(3092581-3092648)
chr2 (431-497)||(11141641-11141708)
chr2 (431-497)||(35047347-35047414)
chr2 (427-504)||(767466-767544)
chr2 (309-370)||(3092728-3092789)
chr2 (700-730)||(6996762-6996792)
chr2 (309-370)||(7309442-7309503)
chr2 (431-497)||(7611567-7611633)
chr2 (424-497)||(28021845-28021919)
chr2 (309-370)||(32839194-32839255)
chr2 (309-370)||(2925133-2925194)
chr2 (424-498)||(39630560-39630636)
[»] chr1 (12 HSPs)
chr1 (424-498)||(946717-946791)
chr1 (309-370)||(946862-946923)
chr1 (309-370)||(15467492-15467553)
chr1 (309-370)||(37036510-37036571)
chr1 (424-497)||(52135009-52135082)
chr1 (309-372)||(37447977-37448040)
chr1 (309-371)||(6470234-6470297)
chr1 (436-497)||(35499386-35499448)
chr1 (309-370)||(37446889-37446950)
chr1 (431-497)||(47074274-47074340)
chr1 (431-495)||(32128421-32128486)
chr1 (436-497)||(37448108-37448169)
[»] chr7 (24 HSPs)
chr7 (437-503)||(23696246-23696312)
chr7 (431-500)||(37460616-37460685)
chr7 (424-498)||(2411647-2411722)
chr7 (431-497)||(14790419-14790485)
chr7 (431-498)||(40496054-40496122)
chr7 (309-370)||(2411794-2411855)
chr7 (309-370)||(39342166-39342227)
chr7 (309-370)||(40495682-40495743)
chr7 (309-358)||(35456299-35456348)
chr7 (309-370)||(43791504-43791565)
chr7 (307-370)||(40496201-40496264)
chr7 (431-497)||(14602917-14602984)
chr7 (431-497)||(22391248-22391315)
chr7 (431-497)||(35456141-35456208)
chr7 (431-497)||(39342306-39342373)
chr7 (309-370)||(23548125-23548186)
chr7 (309-370)||(28538683-28538744)
chr7 (424-497)||(28538816-28538890)
chr7 (309-370)||(30080314-30080375)
chr7 (309-370)||(36328334-36328395)
chr7 (309-370)||(41442609-41442670)
chr7 (309-370)||(42817005-42817066)
chr7 (309-358)||(14602777-14602826)
chr7 (309-358)||(14790562-14790611)
[»] chr5 (14 HSPs)
chr5 (424-498)||(927636-927711)
chr5 (309-370)||(32249655-32249716)
chr5 (309-370)||(12480382-12480443)
chr5 (309-370)||(28489944-28490005)
chr5 (438-497)||(14835128-14835187)
chr5 (309-370)||(10315131-10315192)
chr5 (309-370)||(22304665-22304726)
chr5 (309-370)||(41761750-41761811)
chr5 (309-370)||(6771829-6771890)
chr5 (309-370)||(15270423-15270484)
chr5 (309-358)||(20320535-20320584)
chr5 (436-497)||(28489799-28489860)
chr5 (311-368)||(38178813-38178870)
chr5 (311-368)||(38206037-38206094)
[»] chr3 (14 HSPs)
chr3 (431-497)||(43863631-43863697)
chr3 (307-370)||(48948064-48948127)
chr3 (431-497)||(53470097-53470163)
chr3 (309-370)||(28181804-28181865)
chr3 (307-370)||(645739-645802)
chr3 (431-497)||(38506630-38506697)
chr3 (424-497)||(671327-671401)
chr3 (431-497)||(28092002-28092068)
chr3 (309-370)||(34089058-34089119)
chr3 (309-370)||(36397517-36397578)
chr3 (309-370)||(53469957-53470018)
chr3 (309-358)||(8762281-8762330)
chr3 (309-370)||(34396150-34396211)
chr3 (309-370)||(48824640-48824701)
[»] chr6 (5 HSPs)
chr6 (309-370)||(724817-724878)
chr6 (309-370)||(31413342-31413403)
chr6 (309-370)||(8475611-8475672)
chr6 (309-358)||(29889302-29889352)
chr6 (309-358)||(34364899-34364948)
[»] chr4 (11 HSPs)
chr4 (309-370)||(47108701-47108762)
chr4 (309-370)||(16516649-16516710)
chr4 (431-497)||(31947908-31947975)
chr4 (309-370)||(2126319-2126380)
chr4 (309-370)||(21782454-21782515)
chr4 (309-370)||(30303601-30303662)
chr4 (309-370)||(35470605-35470666)
chr4 (309-370)||(40547774-40547835)
chr4 (309-370)||(42775786-42775847)
chr4 (309-355)||(46242173-46242218)
chr4 (309-370)||(42776566-42776627)
[»] chr8 (17 HSPs)
chr8 (309-370)||(9983130-9983191)
chr8 (431-497)||(26520128-26520194)
chr8 (431-497)||(29482486-29482552)
chr8 (309-370)||(31980052-31980113)
chr8 (309-370)||(44346227-44346288)
chr8 (311-370)||(31976673-31976732)
chr8 (307-370)||(40733639-40733702)
chr8 (431-497)||(33376977-33377044)
chr8 (309-370)||(14720-14781)
chr8 (309-370)||(29256919-29256980)
chr8 (436-497)||(31976819-31976881)
chr8 (436-497)||(31980200-31980262)
chr8 (424-497)||(33986332-33986406)
chr8 (309-370)||(43185462-43185523)
chr8 (437-497)||(14575-14636)
chr8 (309-370)||(29611805-29611866)
chr8 (431-497)||(44346367-44346435)
[»] scaffold0169 (1 HSPs)
scaffold0169 (443-497)||(4359-4413)
[»] scaffold0014 (1 HSPs)
scaffold0014 (436-497)||(223456-223518)


Alignment Details
Target: chr2 (Bit Score: 557; Significance: 0; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 557; E-Value: 0
Query Start/End: Original strand, 14 - 658
Target Start/End: Original strand, 6996067 - 6996720
Alignment:
Q  14 attattctagagcagtttcaatttggtgcagtgttgaatctaatacacacaatcatactaactaatttaactactaacaaactaacggattaattagtta 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6996067 attattctagagcagtttcaatttggtgcagtgttgaatctaatacacacaatcatactaactaatttaactactaacaaactaacggattaattagtta 6996166  T
Q  114 gtta---------caacacattacttgaattacaagctaacttaactaacactttaccttaattcaagtacttgaggaacacaattaccttgcaactaag 204  Q
    ||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6996167 gttacaacggttacaacacattacttgaattacaagctaacttaactaacactttaccttaattcaagtacttgaggaacacaattaccttgcaactaag 6996266  T
Q  205 atctttaaaaccatatggtcttaaagatttggtcattattttagatgtttgcactaaaatgggaaaattgataagcatgagcttattcttgttaacttga 304  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6996267 atctttaaaaccatatggtcttaaagatttcgtcattattttagatgtttgcactcaaatgggaaaattgataagcatgagcttattcttgttaacttga 6996366  T
Q  305 tctatgtttggatgaggtaattagaaattttgtaagaatttagaattctaggcatttcaaatgatttctnnnnnnnnttgttcggataaagtaatnnnnn 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||||||||||         
T  6996367 tctatgtttggatgaggtaattagaaattttgtaagaatttagaattctaggcatttcaaatcatttctaaaaaaatttgttcggataaagtaataaaaa 6996466  T
Q  405 nnttcatcgttatcaattgttggactacttatataaattttaattttttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaattttgagggg 504  Q
      |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6996467 aattcatcattatcaattgttggactacttatataaattttaattttttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaattttgagggg 6996566  T
Q  505 ttagattgtaattgtttgttgtgtgagtttggatataaagatcacatattcttaacttagattctcttatggtgattcagaagcctcctgctagtttatc 604  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6996567 ttagattgtaattgtttgttgtgtgagtttggatataaagatcacatattcttaacttagattctcttattgtgattcagaagcctcctgctagtttatc 6996666  T
Q  605 ctccattttcctagctaatgctcttggtttgtgtcctttgttaagatgtagcca 658  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6996667 ctccattttcctagctaatgctcttggtttgtgtcctttgttaagatgtagcca 6996720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 431 - 498
Target Start/End: Complemental strand, 44256037 - 44255969
Alignment:
Q  431 acttatataaattttaatttttt-gtgtcaaacttgaaaattgaaaataggggccaatatgtaaatttt 498  Q
    |||| |||||||||||||||||| | |||||| ||||||||||||| |||||| ||| |||||||||||    
T  44256037 acttttataaattttaatttttttgggtcaaatttgaaaattgaaattaggggtcaaaatgtaaatttt 44255969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 307 - 370
Target Start/End: Complemental strand, 44256179 - 44256116
Alignment:
Q  307 tatgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||||| |||||||||  ||||||||||||||||||||| || ||||||||    
T  44256179 tatgtttggatgaggtaattgagaaatttta-aagaatttagaattctaggcaatttaaatgatt 44256116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 769575 - 769514
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||||| || ||||||||    
T  769575 tgtttggatgaggtaattgagaaatttta-aagaatttagaattctaggcaatttaaatgatt 769514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 1583338 - 1583399
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||||| || ||||||||    
T  1583338 tgtttggatgaggtaattgagaaatttta-aagaatttagaattctaggcaatttaaatgatt 1583399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 33188795 - 33188856
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||||| || ||||||||    
T  33188795 tgtttggatgaggtaattgagaaatttta-aagaatttagaattctaggcaatttaaatgatt 33188856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 431 - 496
Target Start/End: Original strand, 41585340 - 41585405
Alignment:
Q  431 acttatataaattttaattttttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaatt 496  Q
    |||| ||||||||||||||||||| | |||| ||||||||||||| |||||| | || ||||||||    
T  41585340 acttttataaattttaattttttgggccaaatttgaaaattgaaattaggggtctatttgtaaatt 41585405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 431 - 497
Target Start/End: Original strand, 1583478 - 1583545
Alignment:
Q  431 acttatataaattttaatttttt-gtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||| |||||||||||||||||| | | |||| ||||||||||||| |||||| ||| ||||||||||    
T  1583478 acttttataaattttaatttttttgggccaaatttgaaaattgaaattaggggtcaaaatgtaaattt 1583545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 431 - 493
Target Start/End: Complemental strand, 2925054 - 2924991
Alignment:
Q  431 acttatataaattttaatttttt-gtgtcaaacttgaaaattgaaaataggggccaatatgtaa 493  Q
    |||| |||||||||||||||||| | |||||| ||||||||||||| |||||| |||| |||||    
T  2925054 acttttataaattttaatttttttgggtcaaatttgaaaattgaaattagggggcaatttgtaa 2924991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 431 - 497
Target Start/End: Complemental strand, 3092648 - 3092581
Alignment:
Q  431 acttatataaattttaatttttt-gtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||| |||||||||||||||||| | | |||| ||||||||||||| |||||| ||| ||||||||||    
T  3092648 acttttataaattttaatttttttgggccaaatttgaaaattgaaattaggggtcaaaatgtaaattt 3092581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 431 - 497
Target Start/End: Complemental strand, 11141708 - 11141641
Alignment:
Q  431 acttatataaattttaatttttt-gtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||| |||||||||||||||||| | | |||| ||||||||||||| |||||| ||| ||||||||||    
T  11141708 acttttataaattttaatttttttgggccaaatttgaaaattgaaattaggggtcaaaatgtaaattt 11141641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 431 - 497
Target Start/End: Original strand, 35047347 - 35047414
Alignment:
Q  431 acttatataaattttaatttttt-gtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||| |||||||||||||||||| | | |||| ||||||||||||| |||||| ||| ||||||||||    
T  35047347 acttttataaattttaatttttttgggccaaatttgaaaattgaaattaggggtcaaaatgtaaattt 35047414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 427 - 504
Target Start/End: Complemental strand, 767544 - 767466
Alignment:
Q  427 gactacttatataaattttaattttttgtgtcaaacttgaaaattga-aaataggggccaatatgtaaattttgagggg 504  Q
    |||||||| |||||||||||||||||| | ||||| || |||||  | |||||| ||||||| || |||||||||||||    
T  767544 gactacttttataaattttaattttttttatcaaatttaaaaataaataaatagaggccaatttgcaaattttgagggg 767466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 3092789 - 3092728
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||| | || ||||||||    
T  3092789 tgtttggatgaggtaattgagaaatttta-aagaatttagaattctaggaaatttaaatgatt 3092728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 700 - 730
Target Start/End: Original strand, 6996762 - 6996792
Alignment:
Q  700 gtatactcgaatctttgtttatttgacaagc 730  Q
    |||||||||||||||||||||||||||||||    
T  6996762 gtatactcgaatctttgtttatttgacaagc 6996792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 7309442 - 7309503
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||| ||| || ||||||||    
T  7309442 tgtttggatgaggtaattgagaaatttta-aagaatttagaattctaagcaatttaaatgatt 7309503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 431 - 497
Target Start/End: Original strand, 7611567 - 7611633
Alignment:
Q  431 acttatataaattttaattttttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||| ||||||||||||||||||| | |||| ||||||| ||||| |||||| |||| || ||||||    
T  7611567 acttttataaattttaattttttgggccaaatttgaaaaatgaaattaggggtcaatttgcaaattt 7611633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 424 - 497
Target Start/End: Original strand, 28021845 - 28021919
Alignment:
Q  424 ttggactacttatataaattttaa-ttttttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||||| |||| |||||||||||| ||||||| | |||| ||| ||||||||| |||||| |||| |||||||||    
T  28021845 ttggacaacttttataaattttaatttttttgggccaaatttggaaattgaaattaggggtcaatttgtaaattt 28021919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 32839194 - 32839255
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    ||||| |||||||||||| |||||||||  ||||||||| ||||||||||| |||||||||||    
T  32839194 tgtttagatgaggtaattgagaaatttta-aagaatttaaaattctaggcaattcaaatgatt 32839255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 2925194 - 2925133
Alignment:
Q  309 tgtttggatgaggtaattagaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    ||||||||||| |||||| | || |||  ||||||||||||||||||||| || ||||||||    
T  2925194 tgtttggatgaagtaattgggaaattttaaagaatttagaattctaggcaatttaaatgatt 2925133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 424 - 498
Target Start/End: Complemental strand, 39630636 - 39630560
Alignment:
Q  424 ttggactacttatataaattttaattttttgtg--tcaaacttgaaaattgaaaataggggccaatatgtaaatttt 498  Q
    |||||| |||| |||||||||||||||||| ||  ||||| |  |||||||||| |||||| ||| |||||||||||    
T  39630636 ttggacaacttttataaattttaattttttttggatcaaattaaaaaattgaaattaggggtcaaaatgtaaatttt 39630560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 2e-17; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 424 - 498
Target Start/End: Complemental strand, 946791 - 946717
Alignment:
Q  424 ttggactacttatataaattttaattttttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaatttt 498  Q
    |||||| |||| ||||||||||||||||||| |||||| ||||||||||||| |||||| ||| |||||||||||    
T  946791 ttggacaacttttataaattttaattttttgggtcaaatttgaaaattgaaattagggggcaaaatgtaaatttt 946717  T

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Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 946923 - 946862
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||||| || ||||||||    
T  946923 tgtttggatgaggtaattgagaaatttta-aagaatttagaattctaggcaatttaaatgatt 946862  T

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Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 15467492 - 15467553
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||||| || ||||||||    
T  15467492 tgtttggatgaggtaattaagaaatttt-aaagaatttagaattctaggcaatttaaatgatt 15467553  T

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Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 37036510 - 37036571
Alignment:
Q  309 tgtttggatgaggtaatta-gaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||| |||||||| ||||||||| ||||||||||||||||||| | |||||||||||    
T  37036510 tgtttggatggggtaattaagaaattttg-aagaatttagaattctaggtaattcaaatgatt 37036571  T

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Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 424 - 497
Target Start/End: Original strand, 52135009 - 52135082
Alignment:
Q  424 ttggactacttatataaattttaattttttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    ||||||||||| ||||||||||| ||||| | |  ||| |||||||||||||||||||| |||| || ||||||    
T  52135009 ttggactacttttataaattttattttttggggctaaatttgaaaattgaaaataggggtcaatttgcaaattt 52135082  T

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Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 372
Target Start/End: Original strand, 37447977 - 37448040
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatttc 372  Q
    |||||||||| ||||||| |||||||||| | ||||||||||||||||| | |||||||||||||    
T  37447977 tgtttggatggggtaattgagaaattttg-atgaatttagaattctagggaattcaaatgatttc 37448040  T

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Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 6470234 - 6470297
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgattt 371  Q
    ||||||||||||| |||| |||||||||  ||||||||||||||||||| | || |||||||||    
T  6470234 tgtttggatgaggcaattgagaaatttttaaagaatttagaattctaggtaatttaaatgattt 6470297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 497
Target Start/End: Complemental strand, 35499448 - 35499386
Alignment:
Q  436 tataaattttaatttttt-gtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    ||||||||| |||||||| | |||||| ||||||||||||| |||||| |||| |||||||||    
T  35499448 tataaatttcaatttttttgggtcaaatttgaaaattgaaattaggggtcaatttgtaaattt 35499386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 37446889 - 37446950
Alignment:
Q  309 tgtttggatgaggtaatta-gaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||| |||||||| ||||||||| ||||||||| ||||||||| | |||||||||||    
T  37446889 tgtttggatggggtaattaagaaattttg-aagaatttataattctaggtaattcaaatgatt 37446950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 431 - 497
Target Start/End: Complemental strand, 47074340 - 47074274
Alignment:
Q  431 acttatataaattttaattttttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||| ||||||||||| ||||||| | |||| ||||||||||||| || ||| |||| |||||||||    
T  47074340 acttttataaattttatttttttgggccaaatttgaaaattgaaattaagggtcaatttgtaaattt 47074274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 495
Target Start/End: Complemental strand, 32128486 - 32128421
Alignment:
Q  431 acttatataaattttaatttt-ttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaat 495  Q
    |||| |||||||||||||||| ||| | |||| ||||||||||||| |||||| |||| |||||||    
T  32128486 acttttataaattttaattttattgggccaaatttgaaaattgaaattaggggtcaatttgtaaat 32128421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 436 - 497
Target Start/End: Original strand, 37448108 - 37448169
Alignment:
Q  436 tataaattttaattttttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    ||||||||||||||||||| | |||| ||||||| ||||| |||||| |||| || ||||||    
T  37448108 tataaattttaattttttgggccaaatttgaaaaatgaaattaggggtcaatttgaaaattt 37448169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 437 - 503
Target Start/End: Complemental strand, 23696312 - 23696246
Alignment:
Q  437 ataaattttaattttttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaattttgaggg 503  Q
    |||||||||||||||||| |||||| ||||||||||||| |||||| |||| || ||||||||||||    
T  23696312 ataaattttaattttttgggtcaaatttgaaaattgaaattaggggtcaatttgcaaattttgaggg 23696246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 431 - 500
Target Start/End: Original strand, 37460616 - 37460685
Alignment:
Q  431 acttatataaattttaattttttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaattttga 500  Q
    |||| ||||||||||||||||||| | |||| ||||||||||||| |||||| |||| ||||||||||||    
T  37460616 acttttataaattttaattttttgggccaaatttgaaaattgaaattaggggtcaatttgtaaattttga 37460685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 424 - 498
Target Start/End: Complemental strand, 2411722 - 2411647
Alignment:
Q  424 ttggactacttatataaattttaatttttt-gtgtcaaacttgaaaattgaaaataggggccaatatgtaaatttt 498  Q
    |||||| |||| |||||||||||||||||| | |||||| ||||||||||||| |||||| ||| |||||||||||    
T  2411722 ttggacaacttttataaattttaatttttttgggtcaaatttgaaaattgaaattaggggtcaaaatgtaaatttt 2411647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 431 - 497
Target Start/End: Complemental strand, 14790485 - 14790419
Alignment:
Q  431 acttatataaattttaattttttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||| ||||||||||||||||||| | |||| ||||||||||||| |||||| |||| |||||||||    
T  14790485 acttttataaattttaattttttgggccaaatttgaaaattgaaattaggggtcaatttgtaaattt 14790419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 431 - 498
Target Start/End: Complemental strand, 40496122 - 40496054
Alignment:
Q  431 acttatataaattttaatttttt-gtgtcaaacttgaaaattgaaaataggggccaatatgtaaatttt 498  Q
    |||| |||||||||||||||||| | |||||| ||||||||||||| |||||| ||| |||||||||||    
T  40496122 acttttataaattttaatttttttgggtcaaatttgaaaattgaaattaggggtcaaaatgtaaatttt 40496054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 2411855 - 2411794
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||||| || ||||||||    
T  2411855 tgtttggatgaggtaattgagaaatttta-aagaatttagaattctaggcaatttaaatgatt 2411794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 39342166 - 39342227
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||||| || ||||||||    
T  39342166 tgtttggatgaggtaattgagaaatttta-aagaatttagaattctaggcaatttaaatgatt 39342227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 40495743 - 40495682
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||||||||| |||||||||||||| |||| | |||||||||||    
T  40495743 tgtttggatgaggtaattgagaaattttg-aagaatttagaattatagggaattcaaatgatt 40495682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 309 - 358
Target Start/End: Complemental strand, 35456348 - 35456299
Alignment:
Q  309 tgtttggatgaggtaattagaaattttgtaagaatttagaattctaggca 358  Q
    ||||||||||||||||||  |||||||  |||||||||||||||||||||    
T  35456348 tgtttggatgaggtaattgaaaatttttaaagaatttagaattctaggca 35456299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 43791565 - 43791504
Alignment:
Q  309 tgtttggatgaggtaattagaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||| |||  |||||||||||||||| |||| || ||||||||    
T  43791565 tgtttggatgaggtaattggaaaattttaaagaatttagaattcttggcaatttaaatgatt 43791504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 307 - 370
Target Start/End: Complemental strand, 40496264 - 40496201
Alignment:
Q  307 tatgtttggatgaggtaatta-gaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    ||||||||||||||||||||| ||||||||  ||||||||| ||||||||||| || ||||||||    
T  40496264 tatgtttggatgaggtaattaagaaatttta-aagaatttataattctaggcaatttaaatgatt 40496201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 431 - 497
Target Start/End: Original strand, 14602917 - 14602984
Alignment:
Q  431 acttatataaattttaatttttt-gtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||| |||||||||||||||||| | | |||| ||||||||||||| |||||| ||| ||||||||||    
T  14602917 acttttataaattttaatttttttgggccaaatttgaaaattgaaattaggggtcaaaatgtaaattt 14602984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 431 - 497
Target Start/End: Original strand, 22391248 - 22391315
Alignment:
Q  431 acttatataaattttaatttttt-gtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||| |||||| ||||||||||| | | |||| ||||||||||||| |||||| ||||||||||||||    
T  22391248 acttttataaactttaatttttttgggccaaatttgaaaattgaaattaggggtcaatatgtaaattt 22391315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 431 - 497
Target Start/End: Complemental strand, 35456208 - 35456141
Alignment:
Q  431 acttatataaattttaatttttt-gtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||| |||||||||||||||||| | | |||| ||||||||||||| |||||| ||| ||||||||||    
T  35456208 acttttataaattttaatttttttgggccaaatttgaaaattgaaattaggggtcaaaatgtaaattt 35456141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 431 - 497
Target Start/End: Original strand, 39342306 - 39342373
Alignment:
Q  431 acttatataaattttaatttttt-gtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||| |||||||||||||||||| | | |||| ||||||||||||| |||||| ||| ||||||||||    
T  39342306 acttttataaattttaatttttttgggccaaatttgaaaattgaaattaggggtcaaaatgtaaattt 39342373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 23548125 - 23548186
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||| | || ||||||||    
T  23548125 tgtttggatgaggtaattgagaaatttta-aagaatttagaattctaggaaatttaaatgatt 23548186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 28538683 - 28538744
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||||||||  |||||||||||||| |||||| || ||||||||    
T  28538683 tgtttggatgaggtaattgagaaatttta-aagaatttagaattttaggcaatttaaatgatt 28538744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 424 - 497
Target Start/End: Original strand, 28538816 - 28538890
Alignment:
Q  424 ttggactacttatataaattttaattttttgtgtc-aaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||||| |||| ||||||||||||||||||  | | ||| ||||||||||||| |||||| ||| ||||||||||    
T  28538816 ttggacaacttttataaattttaatttttttaggccaaatttgaaaattgaaattagggggcaaaatgtaaattt 28538890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 30080314 - 30080375
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    ||||| |||||||||||| |||||||||| ||||||||||||||||| ||| || ||||||||    
T  30080314 tgttttgatgaggtaattgagaaattttg-aagaatttagaattctaagcaatttaaatgatt 30080375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 36328334 - 36328395
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||||||||  || |||||||||||||||||| || ||||||||    
T  36328334 tgtttggatgaggtaattgagaaattttaaaa-aatttagaattctaggcaatttaaatgatt 36328395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 41442609 - 41442670
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||  ||||||| |||||||||| ||||||||||||||||||| | |||||||||||    
T  41442609 tgtttggattgggtaattgagaaattttg-aagaatttagaattctaggtaattcaaatgatt 41442670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 42817066 - 42817005
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||| ||||||||||||| |||||||||  ||||||||||||||||||||| || ||||||||    
T  42817066 tgttaggatgaggtaattgagaaatttta-aagaatttagaattctaggcaatttaaatgatt 42817005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 358
Target Start/End: Original strand, 14602777 - 14602826
Alignment:
Q  309 tgtttggatgaggtaattagaaattttgtaagaatttagaattctaggca 358  Q
    ||||||||||||||||||  ||| |||  |||||||||||||||||||||    
T  14602777 tgtttggatgaggtaattgaaaaattttaaagaatttagaattctaggca 14602826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 358
Target Start/End: Complemental strand, 14790611 - 14790562
Alignment:
Q  309 tgtttggatgaggtaattagaaattttgtaagaatttagaattctaggca 358  Q
    |||||||||||||||||| |||| |||  ||||||||||||| |||||||    
T  14790611 tgtttggatgaggtaattggaaaattttaaagaatttagaatcctaggca 14790562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 424 - 498
Target Start/End: Complemental strand, 927711 - 927636
Alignment:
Q  424 ttggactacttatataaattttaatttttt-gtgtcaaacttgaaaattgaaaataggggccaatatgtaaatttt 498  Q
    |||||| |||| |||||||||||||||||| | |||||| ||||||||||||| |||||| ||| |||||||||||    
T  927711 ttggacaacttttataaattttaatttttttgggtcaaatttgaaaattgaaattaggggtcaaaatgtaaatttt 927636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 32249655 - 32249716
Alignment:
Q  309 tgtttggatgaggtaattagaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||| |||  ||||||||||||||||||||| || ||||||||    
T  32249655 tgtttggatgaggtaatttgaaaattttaaagaatttagaattctaggcaatttaaatgatt 32249716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 12480443 - 12480382
Alignment:
Q  309 tgtttggatgaggtaattagaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||| |||  ||||||||||||||||| ||| || ||||||||    
T  12480443 tgtttggatgaggtaattggaaaattttaaagaatttagaattctaagcaatttaaatgatt 12480382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 28490005 - 28489944
Alignment:
Q  309 tgtttggatgaggtaattagaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    ||||||||||||||||||||||| |||  | ||||||||||| ||||||| || ||||||||    
T  28490005 tgtttggatgaggtaattagaaaattttaaggaatttagaatcctaggcaatttaaatgatt 28489944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 497
Target Start/End: Complemental strand, 14835187 - 14835128
Alignment:
Q  438 taaattttaattttttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||||||||||||||||   |||| ||||||||||||| |||||| |||| |||||||||    
T  14835187 taaattttaattttttggaccaaatttgaaaattgaaattaggggtcaatttgtaaattt 14835128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 10315192 - 10315131
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||| ||||||| |||||||||| |||||||||||||| |||| | |||||||||||    
T  10315192 tgtttggatggggtaattgagaaattttg-aagaatttagaattatagggaattcaaatgatt 10315131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 22304726 - 22304665
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||| || || ||||||||    
T  22304726 tgtttggatgaggtaattgagaaatttta-aagaatttagaattctagacaatttaaatgatt 22304665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 41761750 - 41761811
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||||||||  |||||||||||||| |||||| || ||||||||    
T  41761750 tgtttggatgaggtaattgagaaatttta-aagaatttagaattttaggcaatttaaatgatt 41761811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 6771829 - 6771890
Alignment:
Q  309 tgtttggatgaggtaattagaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||| ||||| | || |||  ||||||||||||||||| ||| |||||||||||    
T  6771829 tgtttggatgagttaattgggaaattttaaagaatttagaattctatgcaattcaaatgatt 6771890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 15270423 - 15270484
Alignment:
Q  309 tgtttggatgaggtaattagaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||| ||||||||||| |||| |||  ||||||||||||||||||| | || ||||||||    
T  15270423 tgtttgaatgaggtaattggaaaattttaaagaatttagaattctaggtaattgaaatgatt 15270484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 358
Target Start/End: Original strand, 20320535 - 20320584
Alignment:
Q  309 tgtttggatgaggtaattagaaattttgtaagaatttagaattctaggca 358  Q
    |||||||||||||||||| |||| |||  ||||||||| |||||||||||    
T  20320535 tgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggca 20320584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 436 - 497
Target Start/End: Complemental strand, 28489860 - 28489799
Alignment:
Q  436 tataaattttaattttttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    ||||||||||||||||||| | |||| ||||||||||||| || |||  ||| |||||||||    
T  28489860 tataaattttaattttttgggccaaatttgaaaattgaaattaagggttaatttgtaaattt 28489799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 311 - 368
Target Start/End: Original strand, 38178813 - 38178870
Alignment:
Q  311 tttggatgaggtaattagaaattttgtaagaatttagaattctaggcatttcaaatga 368  Q
    |||||||||||||||| |||| |||  |||||||||||||| |||||| || ||||||    
T  38178813 tttggatgaggtaattggaaaattttaaagaatttagaattataggcaatttaaatga 38178870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 311 - 368
Target Start/End: Original strand, 38206037 - 38206094
Alignment:
Q  311 tttggatgaggtaattagaaattttgtaagaatttagaattctaggcatttcaaatga 368  Q
    |||||||||||||||| |||| |||  |||||||||||||| |||||| || ||||||    
T  38206037 tttggatgaggtaattggaaaattttaaagaatttagaattataggcaatttaaatga 38206094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.000000000001; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 431 - 497
Target Start/End: Original strand, 43863631 - 43863697
Alignment:
Q  431 acttatataaattttaattttttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||| |||||||||||||||||| || |||| ||||||||||||| |||||| ||| ||||||||||    
T  43863631 acttttataaattttaattttttttgccaaatttgaaaattgaaattaggggtcaaaatgtaaattt 43863697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 307 - 370
Target Start/End: Complemental strand, 48948127 - 48948064
Alignment:
Q  307 tatgtttggatgaggtaattagaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    ||||||||||||||||||||  ||| |||  ||||||||||||||||||||| || ||||||||    
T  48948127 tatgtttggatgaggtaattgaaaaattttaaagaatttagaattctaggcaatttaaatgatt 48948064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 431 - 497
Target Start/End: Original strand, 53470097 - 53470163
Alignment:
Q  431 acttatataaattttaattttttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||| ||||||||||||||||||| | |||| ||||||||||||| ||| || ||| ||||||||||    
T  53470097 acttttataaattttaattttttgggccaaatttgaaaattgaaattagaggtcaaaatgtaaattt 53470163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 28181804 - 28181865
Alignment:
Q  309 tgtttggatgaggtaattagaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||| ||||||||| |||| |||  ||||||||||||||||||||| || ||||||||    
T  28181804 tgtttggacgaggtaattggaaaattttaaagaatttagaattctaggcaatttaaatgatt 28181865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 370
Target Start/End: Original strand, 645739 - 645802
Alignment:
Q  307 tatgtttggatgaggtaattagaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||||| |||| |||  ||||||||||||||| | | | |||||||||||    
T  645739 tatgtttggatgaggtaattggaaaattttaaagaatttagaattccaagtaattcaaatgatt 645802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 431 - 497
Target Start/End: Original strand, 38506630 - 38506697
Alignment:
Q  431 acttatataaattttaa-ttttttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||| |||||||||||| ||||||| |||||| || |||||||||| |||||| |||| |||||||||    
T  38506630 acttttataaattttaatttttttgggtcaaatttaaaaattgaaattagggggcaatttgtaaattt 38506697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 424 - 497
Target Start/End: Original strand, 671327 - 671401
Alignment:
Q  424 ttggactacttatataaattttaatttttt-gtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||||| |||| ||||||||||| |||||| | | |||| ||||||||||||| |||||| ||| ||||||||||    
T  671327 ttggacaacttttataaattttattttttttgggccaaatttgaaaattgaaattaggggtcaaaatgtaaattt 671401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 431 - 497
Target Start/End: Complemental strand, 28092068 - 28092002
Alignment:
Q  431 acttatataaattttaattttttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||| ||||||||||||||||||| | |||| || |||||||||| ||| || |||| |||||||||    
T  28092068 acttttataaattttaattttttgggccaaatttaaaaattgaaattagaggtcaatttgtaaattt 28092002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 34089119 - 34089058
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    ||||||||||| |||||| |||||||||  ||||||||||||||||||||| || ||||||||    
T  34089119 tgtttggatgatgtaattgagaaatttta-aagaatttagaattctaggcaatttaaatgatt 34089058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 36397517 - 36397578
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||| || || ||||||||    
T  36397517 tgtttggatgaggtaattgagaaatttta-aagaatttagaattctagacaatttaaatgatt 36397578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 53469957 - 53470018
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||| | || ||||||||    
T  53469957 tgtttggatgaggtaattgagaaatttta-aagaatttagaattctaggtaatttaaatgatt 53470018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 358
Target Start/End: Complemental strand, 8762330 - 8762281
Alignment:
Q  309 tgtttggatgaggtaattagaaattttgtaagaatttagaattctaggca 358  Q
    |||||||||||||||||| |||| |||  ||||||||| |||||||||||    
T  8762330 tgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggca 8762281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 34396150 - 34396211
Alignment:
Q  309 tgtttggatgaggtaattagaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||| |||  |||| |||| ||||||||||| || ||||||||    
T  34396150 tgtttggatgaggtaattggaaaattttaaagagtttaaaattctaggcaatttaaatgatt 34396211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 48824640 - 48824701
Alignment:
Q  309 tgtttggatgaggtaattagaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    ||||||||| |||||||| |||| |||  |||||||||||||| |||||| || ||||||||    
T  48824640 tgtttggataaggtaattggaaaattttaaagaatttagaattttaggcaatttaaatgatt 48824701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000005; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 724817 - 724878
Alignment:
Q  309 tgtttggatgaggtaattagaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    ||||||||||||||||||   |||||| |||||||||||||||||||| | |||||||||||    
T  724817 tgtttggatgaggtaattgagaattttttaagaatttagaattctaggtaattcaaatgatt 724878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 31413403 - 31413342
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||||| | |||||||||||    
T  31413403 tgtttggatggggtaattgagaaattttg-aagaatttagaattctagggaattcaaatgatt 31413342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 8475672 - 8475611
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    ||||| |||||||||||| |||||||||  ||||||||||||||||||||| || ||||||||    
T  8475672 tgtttagatgaggtaattgagaaatttta-aagaatttagaattctaggcaatttaaatgatt 8475611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 358
Target Start/End: Original strand, 29889302 - 29889352
Alignment:
Q  309 tgtttggatgaggtaattagaaattttgt-aagaatttagaattctaggca 358  Q
    |||||||||||||||||| |||||||| | ||||||||| |||||||||||    
T  29889302 tgtttggatgaggtaatttgaaattttttaaagaatttaaaattctaggca 29889352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 358
Target Start/End: Complemental strand, 34364948 - 34364899
Alignment:
Q  309 tgtttggatgaggtaattagaaattttgtaagaatttagaattctaggca 358  Q
    |||||||||||||||||| |||| |||  ||||||||| |||||||||||    
T  34364948 tgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggca 34364899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000005; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 47108762 - 47108701
Alignment:
Q  309 tgtttggatgaggtaattagaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||| |||  ||||||||||||||||||||| || ||||||||    
T  47108762 tgtttggatgaggtaattggaaaattttaaagaatttagaattctaggcaatttaaatgatt 47108701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 16516710 - 16516649
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||||||||| |||||||||||||||| || | |||||||||||    
T  16516710 tgtttggatgaggtaattgagaaattttg-aagaatttagaattcttggtaattcaaatgatt 16516649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 431 - 497
Target Start/End: Complemental strand, 31947975 - 31947908
Alignment:
Q  431 acttatataaattttaatt-ttttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||| |||||||||||||| ||||| |||||| ||||||||| ||| |||||| |||| |||||||||    
T  31947975 acttttataaattttaatttttttgggtcaaatttgaaaattaaaattaggggtcaatttgtaaattt 31947908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 2126380 - 2126319
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||| ||||||| |||||||||  ||||||||||||||||||||| || ||||||||    
T  2126380 tgtttggatggggtaattgagaaatttta-aagaatttagaattctaggcaatttaaatgatt 2126319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 21782515 - 21782454
Alignment:
Q  309 tgtttggatgaggtaatta-gaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    ||||||||||||||||||  ||||||||  |||||||||||||||||| || |||||||||||    
T  21782515 tgtttggatgaggtaattgtgaaatttta-aagaatttagaattctagacaattcaaatgatt 21782454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 30303662 - 30303601
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||| ||||| |||||||||  ||||||||| ||||||||||| |||||||||||    
T  30303662 tgtttggatgagataattgagaaatttta-aagaatttaaaattctaggcaattcaaatgatt 30303601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 35470666 - 35470605
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    ||||||||||| |||||| |||||||||  ||||||||||||||||||||| || ||||||||    
T  35470666 tgtttggatgatgtaattgagaaatttta-aagaatttagaattctaggcaatttaaatgatt 35470605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 40547774 - 40547835
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||||||||  ||||||||| ||||||||||| || ||||||||    
T  40547774 tgtttggatgaggtaattgagaaatttta-aagaatttaaaattctaggcaatttaaatgatt 40547835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 42775786 - 42775847
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||| | || ||||||||    
T  42775786 tgtttggatgaggtaattgagaaatttta-aagaatttagaattctaggaaatttaaatgatt 42775847  T

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Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 355
Target Start/End: Original strand, 46242173 - 46242218
Alignment:
Q  309 tgtttggatgaggtaattagaaattttgtaagaatttagaattctag 355  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  46242173 tgtttggatgaagtaattaggaattttg-aagaatttagaattctag 46242218  T

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Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 42776627 - 42776566
Alignment:
Q  309 tgtttggatgaggtaattagaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||| |||  ||||||||||||| ||| ||| || ||||||||    
T  42776627 tgtttggatgaggtaattggaaaattttaaagaatttagaatcctaagcaatttaaatgatt 42776566  T

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Target: chr8 (Bit Score: 35; Significance: 0.0000000003; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 9983191 - 9983130
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||  || |||||||||||    
T  9983191 tgtttggatgaggtaattgagaaattttg-aagaatttagaattctaatcaattcaaatgatt 9983130  T

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Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 431 - 497
Target Start/End: Original strand, 26520128 - 26520194
Alignment:
Q  431 acttatataaattttaattttttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||| |||||||||||||||||   | |||| ||||||||||||| |||||| ||||||||||||||    
T  26520128 acttttataaattttaatttttatcgccaaatttgaaaattgaaattaggggtcaatatgtaaattt 26520194  T

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Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 431 - 497
Target Start/End: Original strand, 29482486 - 29482552
Alignment:
Q  431 acttatataaattttaattttttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||| ||||||||||||||||||| | |||| ||||||||| ||| |||||| ||| ||||||||||    
T  29482486 acttttataaattttaattttttgggccaaatttgaaaattaaaattaggggtcaaaatgtaaattt 29482552  T

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Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 31980052 - 31980113
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||||| || ||||||||    
T  31980052 tgtttggatgaggtaattgagaaatttta-aagaatttagaattctaggcaatttaaatgatt 31980113  T

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Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 44346227 - 44346288
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||||| || ||||||||    
T  44346227 tgtttggatgaggtaattgagaaatttta-aagaatttagaattctaggcaatttaaatgatt 44346288  T

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Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 311 - 370
Target Start/End: Original strand, 31976673 - 31976732
Alignment:
Q  311 tttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||| |||||||||  ||||||||||||||||||||| || ||||||||    
T  31976673 tttggatgaggtaattgagaaatttta-aagaatttagaattctaggcaatttaaatgatt 31976732  T

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Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 307 - 370
Target Start/End: Original strand, 40733639 - 40733702
Alignment:
Q  307 tatgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||||| |||||||||  ||||||||| ||||||||||| || ||||||||    
T  40733639 tatgtttggatgaggtaattgagaaatttta-aagaatttaaaattctaggcaatttaaatgatt 40733702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 431 - 497
Target Start/End: Original strand, 33376977 - 33377044
Alignment:
Q  431 acttatataaattttaatttttt-gtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||| |||||||||||||||||| | | |||| ||||||||||||| |||||| ||| ||||||||||    
T  33376977 acttttataaattttaatttttttgggccaaatttgaaaattgaaattaggggtcaaaatgtaaattt 33377044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 14781 - 14720
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    ||||||||||||| |||| |||||||||  ||||||||||||||||||||| || ||||||||    
T  14781 tgtttggatgaggaaattgagaaatttta-aagaatttagaattctaggcaatttaaatgatt 14720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 29256919 - 29256980
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||| ||||||||| |||||||||  ||||||||||||||||||||| || ||||||||    
T  29256919 tgtttggacgaggtaattgagaaatttta-aagaatttagaattctaggcaatttaaatgatt 29256980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 497
Target Start/End: Original strand, 31976819 - 31976881
Alignment:
Q  436 tataaattttaat-tttttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    ||||||||||||| |||||| | |||| ||||||||||||| |||||| ||| ||||||||||    
T  31976819 tataaattttaatatttttgggccaaatttgaaaattgaaattaggggtcaaaatgtaaattt 31976881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 497
Target Start/End: Original strand, 31980200 - 31980262
Alignment:
Q  436 tataaattttaat-tttttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    ||||||||||||| |||||| | |||| ||||||||||||| |||||| ||| ||||||||||    
T  31980200 tataaattttaatatttttgggccaaatttgaaaattgaaattaggggtcaaaatgtaaattt 31980262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 424 - 497
Target Start/End: Complemental strand, 33986406 - 33986332
Alignment:
Q  424 ttggactacttatataaattttaattttttgtg-tcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||||| |||| ||||||||||||||| | | | ||||| ||||||||||||| |||||| |||| |||||||||    
T  33986406 ttggacaacttttataaattttaatttctagcggtcaaatttgaaaattgaaattaggggtcaatttgtaaattt 33986332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 43185523 - 43185462
Alignment:
Q  309 tgtttggatgaggtaatt-agaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||| || || ||||||||    
T  43185523 tgtttggatgaggtaattgagaaatttta-aagaatttagaattctagacaatttaaatgatt 43185462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 437 - 497
Target Start/End: Complemental strand, 14636 - 14575
Alignment:
Q  437 ataaattttaat-tttttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||||||||||| |||||| | |||| ||||||||||||| |||||| ||| ||||||||||    
T  14636 ataaattttaatatttttgggccaaatttgaaaattgaaattaggggtcaaaatgtaaattt 14575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 29611866 - 29611805
Alignment:
Q  309 tgtttggatgaggtaattagaaattttgtaagaatttagaattctaggcatttcaaatgatt 370  Q
    |||||||||| ||||||| |||| |||  |||||||||||||| |||||| || ||||||||    
T  29611866 tgtttggatgtggtaattggaaaattttaaagaatttagaattttaggcaatttaaatgatt 29611805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 497
Target Start/End: Original strand, 44346367 - 44346435
Alignment:
Q  431 acttatataaattttaattttttgtgt--caaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||| |||||||||||||||||| ||   |||| ||||||||||||| |||||| ||| ||||||||||    
T  44346367 acttttataaattttaattttttttgggccaaatttgaaaattgaaattaggggtcaaaatgtaaattt 44346435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 443 - 497
Target Start/End: Complemental strand, 4413 - 4359
Alignment:
Q  443 tttaattttttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    |||||||||||| |||||| ||||||||| ||| |||||| |||| |||||||||    
T  4413 tttaattttttgggtcaaatttgaaaattaaaattaggggtcaatttgtaaattt 4359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 497
Target Start/End: Original strand, 223456 - 223518
Alignment:
Q  436 tataaattttaat-tttttgtgtcaaacttgaaaattgaaaataggggccaatatgtaaattt 497  Q
    ||||||||||||| |||||| | |||| ||||||||||||| |||||| ||| ||||||||||    
T  223456 tataaattttaatatttttgggccaaatttgaaaattgaaattaggggtcaaaatgtaaattt 223518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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