View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18844_low_14 (Length: 252)
Name: NF18844_low_14
Description: NF18844
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18844_low_14 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 5 - 252
Target Start/End: Original strand, 32646583 - 32646830
Alignment:
| Q |
5 |
tttgattatgtactcattacataatagtaagataatttcacaccatataatttttcattatagcttaaagatattttgccttcagttgttgagcatggag |
104 |
Q |
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|||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32646583 |
tttgattatgtactcattacatgatagtaagataagttcacaccatataatttttcattatagcttaaagatattttgccttcagttgttgagcatggag |
32646682 |
T |
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| Q |
105 |
gtgcctatagttgtagacaactgctgtgcctaagtttatagctatgttcaatgtttgtactttgtcctctattttacagttgattagtgtacaatgtaga |
204 |
Q |
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|||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32646683 |
gtgcctatagttgtagacaactgccgggcctaagtttatagctatgttcaatgtttgtactttgtcctctattttacagttgattagtgtacaatgtaga |
32646782 |
T |
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| Q |
205 |
ccattcagcttatttgttctttgattgattctcaagttaagttggaga |
252 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32646783 |
ccattcagcttatttgttctttgattgattctcaagttaagttggaga |
32646830 |
T |
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