View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18845_high_4 (Length: 506)

Name: NF18845_high_4
Description: NF18845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18845_high_4
NF18845_high_4
[»] chr4 (6 HSPs)
chr4 (310-477)||(51246621-51246788)
chr4 (310-477)||(17525421-17525590)
chr4 (305-471)||(24853351-24853517)
chr4 (305-477)||(24856236-24856408)
chr4 (305-466)||(28787018-28787182)
chr4 (349-477)||(28787959-28788094)
[»] scaffold0406 (1 HSPs)
scaffold0406 (305-477)||(6279-6451)
[»] chr5 (6 HSPs)
chr5 (307-477)||(5046447-5046625)
chr5 (307-477)||(5047218-5047396)
chr5 (307-477)||(5047989-5048167)
chr5 (305-435)||(5664748-5664877)
chr5 (343-388)||(15063192-15063237)
chr5 (409-469)||(5663780-5663840)
[»] chr7 (1 HSPs)
chr7 (305-477)||(22622302-22622474)
[»] chr3 (3 HSPs)
chr3 (306-466)||(12738201-12738369)
chr3 (306-477)||(12739341-12739523)
chr3 (432-477)||(15023058-15023103)
[»] chr2 (4 HSPs)
chr2 (310-476)||(20978765-20978940)
chr2 (121-267)||(23007034-23007178)
chr2 (356-421)||(33798822-33798887)
chr2 (367-443)||(19292331-19292408)
[»] chr1 (2 HSPs)
chr1 (305-477)||(22056474-22056639)
chr1 (332-477)||(22055420-22055564)
[»] chr8 (1 HSPs)
chr8 (306-468)||(1275127-1275291)


Alignment Details
Target: chr4 (Bit Score: 136; Significance: 1e-70; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 51246788 - 51246621
Alignment:
Q  310 ggacaaaaggacacacattaggaattagctcactgtaggaggagagaatataatttggtgaagccttcaatattattgatattacatcccaaaggcttga 409  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  51246788 ggacaagaggacacacattaggaattagctcattgtaggaggagagaatatgatttggtgaagccttcaatattattgacattacatcccaaaggcttga 51246689  T
Q  410 atacaattgcacccatataagtctatttataggtgcctgtaaatgtttctagaactagaatattctag 477  Q
    ||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||| |||||    
T  51246688 atacaattgcacccatataagtctacttataggtgcttgtagatgtttctagaactagaataatctag 51246621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 310 - 477
Target Start/End: Original strand, 17525421 - 17525590
Alignment:
Q  310 ggacaaaaggacacacattaggaattagctcactgtaggaggagagaatataatttggtgaagccttcaatattattgata--ttacatcccaaaggctt 407  Q
    |||||| ||||||||  ||| ||||||||||| |||||||||||||||||| || |||||||||||||||||||||||| |  || |||| |||||||||    
T  17525421 ggacaagaggacacatgttatgaattagctcattgtaggaggagagaatatgatatggtgaagccttcaatattattgacacattgcatctcaaaggctt 17525520  T
Q  408 gaatacaattgcacccatataagtctatttataggtgcctgtaaatgtttctagaactagaatattctag 477  Q
    |||||||||| ||| |||||||||||||||||| | || |||| |||||||||||||||||||| |||||    
T  17525521 gaatacaatttcacacatataagtctatttataagcgcttgtagatgtttctagaactagaataatctag 17525590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 305 - 471
Target Start/End: Complemental strand, 24853517 - 24853351
Alignment:
Q  305 gcattggacaaaaggacacacattaggaattagctcactgtaggaggagagaatataatttggtgaagccttcaatattattgatattacatcccaaagg 404  Q
    ||||||||||| |||||||| ||| | |||||||||| |||||||||| ||||||| || || ||||||||||||||||||||| ||| ||||  |||||    
T  24853517 gcattggacaagaggacacatattggtaattagctcattgtaggaggaaagaatatgatatgatgaagccttcaatattattgacattgcatcttaaagg 24853418  T
Q  405 cttgaatacaattgcacccatataagtctatttataggtgcctgtaaatgtttctagaactagaata 471  Q
    |||||||||||||||| ||| |||||||||||||||||||   | | |||||| |||||||||||||    
T  24853417 cttgaatacaattgcatccaaataagtctatttataggtgttagaagatgtttttagaactagaata 24853351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 305 - 477
Target Start/End: Complemental strand, 24856408 - 24856236
Alignment:
Q  305 gcattggacaaaaggacacacattaggaattagctcactgtaggaggagagaatataatttggtgaagccttcaatattattgatattacatcccaaagg 404  Q
    ||||||||||| | |||||| ||| | |||||||||| |||||||||||||||||| || ||||||| | |||||||||||||| ||| ||||  |||||    
T  24856408 gcattggacaagatgacacatattggtaattagctcattgtaggaggagagaatatgatatggtgaaactttcaatattattgacattgcatcttaaagg 24856309  T
Q  405 cttgaatacaattgcacccatataagtctatttataggtgcctgtaaatgtttctagaactagaatattctag 477  Q
    || ||||||||||||| ||  |||||||||||||||||||   | |||||||||||||||||||||| |||||    
T  24856308 ctggaatacaattgcatcctaataagtctatttataggtgttagaaaatgtttctagaactagaataatctag 24856236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 305 - 466
Target Start/End: Complemental strand, 28787182 - 28787018
Alignment:
Q  305 gcattggacaaaaggacacacattaggaattagctcactgtaggaggagagaatataatttggtg---aagccttcaatattattgatattacatcccaa 401  Q
    |||||| |||| |||||||||||||| ||||| |||| | |||||||||| ||||| || |||||   ||||||||||||||||  | ||| ||||  ||    
T  28787182 gcattgaacaagaggacacacattagtaattacctcattataggaggagataatatgatatggtggtgaagccttcaatattatatacattgcatctaaa 28787083  T
Q  402 aggcttgaatacaattgcacccatataagtctatttataggtgcctgtaaatgtttctagaacta 466  Q
    ||||||||||||||||||||| ||||| |||||||||||||||| || | |||||||||||||||    
T  28787082 aggcttgaatacaattgcaccaatatatgtctatttataggtgcttgaagatgtttctagaacta 28787018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 349 - 477
Target Start/End: Complemental strand, 28788094 - 28787959
Alignment:
Q  349 aggagagaatataatttggtgaagccttcaatatta-------ttgatattacatcccaaaggcttgaatacaattgcacccatataagtctatttatag 441  Q
    |||||||||||| || ||||||||||||||||||||       |||| ||| ||||  ||||||||||||||||||||||||||||| ||||||||||||    
T  28788094 aggagagaatatcatgtggtgaagccttcaatattaaatattattgacattgcatcttaaaggcttgaatacaattgcacccatatatgtctatttatag 28787995  T
Q  442 gtgcctgtaaatgtttctagaactagaatattctag 477  Q
    |||  || | |||||||||||||||||||| |||||    
T  28787994 gtgtttgaagatgtttctagaactagaataatctag 28787959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 305 - 477
Target Start/End: Complemental strand, 6451 - 6279
Alignment:
Q  305 gcattggacaaaaggacacacattaggaattagctcactgtaggaggagagaatataatttggtgaagccttcaatattattgatattacatcccaaagg 404  Q
    ||||||||||| | ||||||||||||||||||||||| | |||||||||| ||||| |||| |||||||||||||||||||||| ||| |||| ||||||    
T  6451 gcattggacaagatgacacacattaggaattagctcattataggaggagataatatgattttgtgaagccttcaatattattgacattgcatctcaaagg 6352  T
Q  405 cttgaatacaattgcacccatataagtctatttataggtgcctgtaaatgtttctagaactagaatattctag 477  Q
    ||||||||||||| ||||||||||||||||||||||||||| || |  ||||||||||||||||||| |||||    
T  6351 cttgaatacaatttcacccatataagtctatttataggtgcttgaagctgtttctagaactagaataatctag 6279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 2e-38; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 307 - 477
Target Start/End: Complemental strand, 5046625 - 5046447
Alignment:
Q  307 attggacaaaaggacacacattaggaattagctcactgtaggaggagagaatataatttggtgaagccttcaatattattgatattacatcccaa----- 401  Q
    ||||||||||||||||| |||| | || ||||||| |||||||||||||||||| || |||||||||||  ||||||||||| ||| |||| |||         
T  5046625 attggacaaaaggacacgcattggtaagtagctcattgtaggaggagagaatatgatatggtgaagcctctaatattattgacattgcatctcaatggct 5046526  T
Q  402 ---aggcttgaatacaattgcacccatataagtctatttataggtgcctgtaaatgtttctagaactagaatattctag 477  Q
       |||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||| |||||||||| |||||    
T  5046525 taaaggcttgaatacaattgcactcatataagtctatttataggtgcttgtagatgtttctaaaactagaataatctag 5046447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 307 - 477
Target Start/End: Complemental strand, 5047396 - 5047218
Alignment:
Q  307 attggacaaaaggacacacattaggaattagctcactgtaggaggagagaatataatttggtgaagccttcaatattattgatattacatcccaa----- 401  Q
    ||||||||||||||||| |||| | || ||||||| |||||||||||||||||| || |||||||||||  ||||||||||| ||| |||  |||         
T  5047396 attggacaaaaggacacgcattggtaagtagctcattgtaggaggagagaatatgatatggtgaagcctctaatattattgacattgcatttcaatggct 5047297  T
Q  402 ---aggcttgaatacaattgcacccatataagtctatttataggtgcctgtaaatgtttctagaactagaatattctag 477  Q
       |||||||||||||||||||| ||||||||| ||||||||||||| |||| ||||||||| |||||||||| |||||    
T  5047296 taaaggcttgaatacaattgcactcatataagtatatttataggtgcttgtagatgtttctaaaactagaataatctag 5047218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 307 - 477
Target Start/End: Complemental strand, 5048167 - 5047989
Alignment:
Q  307 attggacaaaaggacacacattaggaattagctcactgtaggaggagagaatataatttggtgaagccttcaatattattgatattacatcccaa----- 401  Q
    |||||| |||||||||| |||| | || ||| | | |||||||||||||||||| || |||||||||||  ||||||||||| ||| ||||  ||         
T  5048167 attggataaaaggacacgcattggtaagtagtttattgtaggaggagagaatatgatatggtgaagcctctaatattattgacattgcatcttaatggct 5048068  T
Q  402 ---aggcttgaatacaattgcacccatataagtctatttataggtgcctgtaaatgtttctagaactagaatattctag 477  Q
       |||||||||||||||||||| ||||||||| ||||||||||||| |||| |||||| || |||||||||| |||||    
T  5048067 taaaggcttgaatacaattgcactcatataagtatatttataggtgcttgtagatgtttttaaaactagaataatctag 5047989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 435
Target Start/End: Original strand, 5664748 - 5664877
Alignment:
Q  305 gcattggacaaaaggacacacattaggaattagctcactgtaggaggagagaatataatttggtgaagccttcaatattattgatattacatcccaaagg 404  Q
    ||||||||||| | | |||||||| | |||||  | | |||||||||||||||||| ||   | |||||| ||||||||||||  |||  ||   ||||     
T  5664748 gcattggacaagaaggcacacattggtaattaatttattgtaggaggagagaatatgatacagggaagccctcaatattattgtcattgtatttaaaag- 5664846  T
Q  405 cttgaatacaattgcacccatataagtctat 435  Q
    |||||||||||||||||||||||||||||||    
T  5664847 cttgaatacaattgcacccatataagtctat 5664877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 388
Target Start/End: Complemental strand, 15063237 - 15063192
Alignment:
Q  343 tgtaggaggagagaatataatttggtgaagccttcaatattattga 388  Q
    ||||||||| |||||||| || ||||||||||||||||||||||||    
T  15063237 tgtaggaggtgagaatatgatatggtgaagccttcaatattattga 15063192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 469
Target Start/End: Original strand, 5663780 - 5663840
Alignment:
Q  409 aatacaattgcacccatataagtctatttataggtgcctgtaaatgtttctagaactagaa 469  Q
    |||||||| |||||||||||| |||||||||| |||  || | ||||||||| ||||||||    
T  5663780 aatacaatcgcacccatataattctatttataagtgattgaagatgtttctaaaactagaa 5663840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 305 - 477
Target Start/End: Original strand, 22622302 - 22622474
Alignment:
Q  305 gcattggacaaaaggacacacattaggaattagctcactgtaggaggagagaatataatttggtgaagccttcaatattattgatattacatcccaaagg 404  Q
    ||||||||||| |||||||| |||   |||||||||| | |||||||| ||||||| |  |||| | |||| |||||||||||| ||  |||| ||||||    
T  22622302 gcattggacaagaggacacatattgtaaattagctcattctaggaggaaagaatatgaaatggtaatgcctacaatattattgacatggcatctcaaagg 22622401  T
Q  405 cttgaatacaattgcacccatataagtctatttataggtgcctgtaaatgtttctagaactagaatattctag 477  Q
    |||||||||||||||||||||||||| ||||||||| ||||||| | |||||||||||| ||||||| |||||    
T  22622402 cttgaatacaattgcacccatataagcctatttataagtgcctgaagatgtttctagaattagaataatctag 22622474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 2e-32; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 306 - 466
Target Start/End: Complemental strand, 12738369 - 12738201
Alignment:
Q  306 cattggacaaaaggacacacattaggaattagctcactgtaggaggagagaatataatttggtgaagccttcaatattattgatattacatcccaaa--- 402  Q
    ||||| |||| ||||||| ||| || ||| |||||| |||||||| ||||||||| ||||||||||||||||||||||||| | ||| |||| ||||       
T  12738369 cattgcacaagaggacacgcatcagtaataagctcattgtaggagaagagaatatgatttggtgaagccttcaatattatttagattgcatctcaaaagc 12738270  T
Q  403 -----ggcttgaatacaattgcacccatataagtctatttataggtgcctgtaaatgtttctagaacta 466  Q
         |||||||||||||||||||||| |||||| ||||||||||||| |||| |||||||||||||||    
T  12738269 ttaaaggcttgaatacaattgcacccaaataagtttatttataggtgcttgtagatgtttctagaacta 12738201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 306 - 477
Target Start/End: Complemental strand, 12739523 - 12739341
Alignment:
Q  306 cattggacaaaaggacacacattaggaattagctcactgtaggaggagagaa---tataatttggtgaagccttcaatattattgatattacatcccaaa 402  Q
    ||||| |||| |||||||||||||  ||| |||||| |||||||| ||||||   ||| ||||||||||||||||||||||||| | ||| |||| ||||    
T  12739523 cattgcacaagaggacacacattaataataagctcattgtaggagaagagaagaatatgatttggtgaagccttcaatattattaacattgcatctcaaa 12739424  T
Q  403 ggctt--------gaatacaattgcacccatataagtctatttataggtgcctgtaaatgtttctagaactagaatattctag 477  Q
    |||||        ||||||||||||| ||| |||| ||||||||||| ||| |||| ||||||||||||||| |||| |||||    
T  12739423 ggcttaaaggcttgaatacaattgcatccaaataattctatttatagatgcttgtagatgtttctagaactaaaataatctag 12739341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 477
Target Start/End: Complemental strand, 15023103 - 15023058
Alignment:
Q  432 ctatttataggtgcctgtaaatgtttctagaactagaatattctag 477  Q
    |||||||||||||| |||| ||||||||||||||| |||| |||||    
T  15023103 ctatttataggtgcttgtagatgtttctagaactaaaataatctag 15023058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 4e-27; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 310 - 476
Target Start/End: Original strand, 20978765 - 20978940
Alignment:
Q  310 ggacaaaaggacacacattaggaattagctcactgtaggaggagagaatataatttggtgaagccttcaatattattgatattacatccc--------aa 401  Q
    |||||| ||||||||||||||  || |||  | |||||||||||||||||| || |||||||||||||||||||||||| ||| |||| |        ||    
T  20978765 ggacaagaggacacacattagtgataagcatattgtaggaggagagaatatgatatggtgaagccttcaatattattgacattgcatctcaaaggtttaa 20978864  T
Q  402 aggcttgaatacaattgcacccatataagtctatttataggtgc-ctgtaaatgtttctagaactagaatattcta 476  Q
    ||||||||||| ||| |||||||||||||| ||||||||||| |  |||| |||||||||||||||||||| ||||    
T  20978865 aggcttgaatataatggcacccatataagtttatttataggtactttgtagatgtttctagaactagaataatcta 20978940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 121 - 267
Target Start/End: Original strand, 23007034 - 23007178
Alignment:
Q  121 ccaactaaaaaggatgttcttggacagataatatttcccaacaactaaatacttggcgctaaaaaatgaaatagcaagcttcaagcaacgtgaggaagaa 220  Q
    ||||||||| |||| ||||||||| || || |  ||||||||||||||||||||||| ||||||||  ||||||||||| |||| |||||||||| ||||    
T  23007034 ccaactaaagaggaagttcttggataggtatt--ttcccaacaactaaatacttggcactaaaaaaccaaatagcaagcctcaatcaacgtgagggagaa 23007131  T
Q  221 acattatacgatgcctttgagaggttcaaaatactgctaaaaaatgt 267  Q
    ||| | || ||||| |  || |||||||| |||||  ||||||||||    
T  23007132 acaatgtaagatgcttgggaaaggttcaagatactattaaaaaatgt 23007178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 33798822 - 33798887
Alignment:
Q  356 aatataatttggtgaagccttcaatattattgatattacatcccaaaggcttgaatacaattgcac 421  Q
    |||||||| | |||||||| | ||| |||||||  ||||||| |||||||||||||||||||||||    
T  33798822 aatataatatagtgaagcccttaatgttattgacgttacatctcaaaggcttgaatacaattgcac 33798887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 443
Target Start/End: Original strand, 19292331 - 19292408
Alignment:
Q  367 gtgaagccttcaatattatt-gatattacatcccaaaggcttgaatacaattgcacccatataagtctatttataggt 443  Q
    ||||||| |||||||||||| |  |||||||  |||||| |||||||||||||||| ||| |  ||||||||||||||    
T  19292331 gtgaagctttcaatattatttggcattacatatcaaaggtttgaatacaattgcacacatgtttgtctatttataggt 19292408  T

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Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 477
Target Start/End: Original strand, 22056474 - 22056639
Alignment:
Q  305 gcattggacaaaaggacacacattaggaattagctcactgtaggaggagagaatataatttggtgaagccttcaatattat-tgatattacatcccaaag 403  Q
    ||||||||||| |||||||| ||| | ||||| |||| |||| |||||||||||||||| ||||||||||||||||| ||| ||| ||| |||           
T  22056474 gcattggacaagaggacacatatttgtaattaactcattgtatgaggagagaatataatatggtgaagccttcaatagtatctgacattgcat------- 22056566  T
Q  404 gcttgaatacaattgcacccatataagtctatttataggtgcctgtaaatgtttctagaactagaatattctag 477  Q
    |||||||| |||||||| || | ||||||| ||||||||||| || | || ||||||||||||||||| |||||    
T  22056567 gcttgaatgcaattgca-ccttttaagtctctttataggtgcttgaagatatttctagaactagaataatctag 22056639  T

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Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 477
Target Start/End: Original strand, 22055420 - 22055564
Alignment:
Q  332 aattagctcactgtaggaggagagaatataatttggtgaagccttcaatattattgatattacatcccaaaggcttgaatacaattgcacccatataagt 431  Q
    |||||||||  |||| ||||| | |||||||| ||||||||||||||||||||| || ||| ||||  |||||||||| |||||||||| ||||   |||    
T  22055420 aattagctccatgtatgaggaaataatataatatggtgaagccttcaatattatcgacattgcatctgaaaggcttgactacaattgca-ccattccagt 22055518  T
Q  432 ctatttataggtgcctgtaaatgtttctagaactagaatattctag 477  Q
    ||||||||| |||| || | ||| ||||||||||| |||| |||||    
T  22055519 ctatttataagtgcttgaagatgattctagaactaaaataatctag 22055564  T

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Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 306 - 468
Target Start/End: Original strand, 1275127 - 1275291
Alignment:
Q  306 cattggacaaaaggacacacattaggaattagctcactgtaggaggagagaatataatttggtgaagccttc--aatattattgatattacatcccaaag 403  Q
    |||||||||| |||||||||||||| | |||   || |||| ||| |||||| || |||||||||||||||   ||||||||||| ||| ||||  |||     
T  1275127 cattggacaagaggacacacattagtagttactacattgtatgagaagagaacatgatttggtgaagcctttttaatattattgacattgcatcttaaac 1275226  T
Q  404 gcttgaatacaattgcacccatataagtctatttataggtgcctgtaaatgtttctagaactaga 468  Q
    | |||||||||||||||||||||||  | || |||||||||| || |  ||||||||||||||||    
T  1275227 gtttgaatacaattgcacccatatacctatacttataggtgcttgaaggtgtttctagaactaga 1275291  T

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