View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18845_low_21 (Length: 210)
Name: NF18845_low_21
Description: NF18845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18845_low_21 |
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Alignment Details
Target: chr3 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 37997879 - 37998058
Alignment:
| Q |
13 |
gattatactgaatggtggttgatcagatttacttagaagtcaaagggttcatattctgaatgtgcccagaattttcaacctcattatcgaccaagataat |
112 |
Q |
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| T |
37997879 |
gattatactgaatggtggttgatcagatttacttagaagtcaaagggttcatattctgaatgtgcccagaattttcaacctcattatcgaccaagataat |
37997978 |
T |
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| Q |
113 |
tgtttagatttttcaagattatgcgaatgtgacaaatgcccaccgacaatgtttaagaattcgatccttttcacatttat |
192 |
Q |
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| T |
37997979 |
tgtttagatttttcaagattatgcgaatgtgacaaatgcccaccgacaatgtttaagaattcgatccttttcacatttat |
37998058 |
T |
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