View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18847_low_14 (Length: 398)

Name: NF18847_low_14
Description: NF18847
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18847_low_14
NF18847_low_14
[»] chr5 (66 HSPs)
chr5 (20-332)||(38473335-38473645)
chr5 (11-118)||(15613522-15613629)
chr5 (1-164)||(1273096-1273259)
chr5 (1-164)||(19523990-19524152)
chr5 (3-118)||(42980701-42980816)
chr5 (3-101)||(15614969-15615067)
chr5 (1-123)||(19827127-19827249)
chr5 (3-100)||(27894033-27894130)
chr5 (1-117)||(5382949-5383065)
chr5 (43-167)||(5384289-5384413)
chr5 (1-101)||(18677983-18678083)
chr5 (17-117)||(42979471-42979571)
chr5 (1-160)||(5975763-5975922)
chr5 (1-110)||(19525288-19525397)
chr5 (1-113)||(1663194-1663306)
chr5 (3-111)||(15509204-15509312)
chr5 (48-123)||(15857605-15857680)
chr5 (5-123)||(224577-224695)
chr5 (11-101)||(7345399-7345489)
chr5 (1-123)||(12936089-12936211)
chr5 (3-101)||(18693707-18693805)
chr5 (3-101)||(21387646-21387744)
chr5 (3-117)||(40058027-40058141)
chr5 (48-117)||(42510168-42510237)
chr5 (3-111)||(4567973-4568081)
chr5 (1-101)||(12933758-12933858)
chr5 (1-164)||(22812332-22812496)
chr5 (3-118)||(8762392-8762507)
chr5 (1-164)||(12950206-12950369)
chr5 (11-66)||(32521703-32521758)
chr5 (3-69)||(5061037-5061103)
chr5 (12-101)||(26403325-26403414)
chr5 (1-101)||(12947919-12948019)
chr5 (28-101)||(26404219-26404292)
chr5 (3-123)||(18695634-18695754)
chr5 (53-117)||(32734190-32734254)
chr5 (63-118)||(10084667-10084722)
chr5 (1-111)||(10085844-10085954)
chr5 (3-105)||(4566960-4567062)
chr5 (3-69)||(5062227-5062293)
chr5 (52-117)||(12830931-12830996)
chr5 (52-117)||(12862911-12862976)
chr5 (52-101)||(22819558-22819607)
chr5 (3-67)||(1273383-1273447)
chr5 (341-381)||(38473276-38473316)
chr5 (2-118)||(40059320-40059436)
chr5 (3-69)||(15510304-15510370)
chr5 (63-117)||(22819510-22819564)
chr5 (11-101)||(26912347-26912437)
chr5 (3-69)||(32521963-32522029)
chr5 (44-166)||(32735423-32735545)
chr5 (48-126)||(42511650-42511728)
chr5 (48-101)||(326398-326451)
chr5 (52-101)||(2167523-2167572)
chr5 (12-69)||(22650669-22650726)
chr5 (12-117)||(38471307-38471412)
chr5 (3-71)||(20988699-20988767)
chr5 (44-112)||(24761719-24761787)
chr5 (3-69)||(15153886-15153952)
chr5 (3-69)||(19050758-19050824)
chr5 (53-123)||(21389130-21389200)
chr5 (1-38)||(24805298-24805335)
chr5 (3-75)||(1982721-1982793)
chr5 (3-75)||(12952769-12952841)
chr5 (3-75)||(28236928-28237000)
chr5 (3-75)||(37371066-37371138)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-381)||(48196-48565)
scaffold0003 (1-117)||(47077-47193)
[»] chr6 (37 HSPs)
chr6 (1-381)||(27438797-27439166)
chr6 (59-239)||(13800096-13800272)
chr6 (11-118)||(22299895-22300002)
chr6 (5-117)||(9927617-9927728)
chr6 (2-111)||(8412315-8412424)
chr6 (1-101)||(5311286-5311386)
chr6 (1-117)||(27440168-27440284)
chr6 (11-118)||(8411103-8411210)
chr6 (43-117)||(293633-293707)
chr6 (3-88)||(19368540-19368625)
chr6 (1-96)||(34084148-34084241)
chr6 (3-117)||(31738372-31738486)
chr6 (2-123)||(33807697-33807818)
chr6 (3-71)||(13173046-13173114)
chr6 (3-123)||(31740259-31740379)
chr6 (1-117)||(33802010-33802126)
chr6 (3-101)||(2138646-2138744)
chr6 (3-101)||(26581962-26582059)
chr6 (52-117)||(14328767-14328832)
chr6 (52-117)||(14421777-14421842)
chr6 (3-68)||(26584079-26584144)
chr6 (11-98)||(34083075-34083163)
chr6 (208-254)||(9928460-9928506)
chr6 (11-69)||(18773671-18773729)
chr6 (3-101)||(22298613-22298711)
chr6 (1-101)||(18139496-18139596)
chr6 (11-69)||(8447238-8447296)
chr6 (11-69)||(8456042-8456100)
chr6 (3-69)||(28225433-28225499)
chr6 (11-69)||(19367734-19367792)
chr6 (12-66)||(28226462-28226516)
chr6 (2-103)||(13176340-13176441)
chr6 (56-101)||(14326215-14326260)
chr6 (56-101)||(14419225-14419270)
chr6 (253-305)||(9928394-9928445)
chr6 (11-75)||(12203306-12203370)
chr6 (3-75)||(17916504-17916576)
[»] chr1 (83 HSPs)
chr1 (44-233)||(14171148-14171334)
chr1 (13-167)||(26054916-26055070)
chr1 (3-111)||(26056146-26056254)
chr1 (1-112)||(3978051-3978162)
chr1 (11-118)||(13641274-13641381)
chr1 (48-126)||(36511315-36511393)
chr1 (1-123)||(49139808-49139930)
chr1 (2-111)||(3979312-3979421)
chr1 (2-118)||(52181297-52181413)
chr1 (1-111)||(25787163-25787273)
chr1 (2-111)||(47410992-47411101)
chr1 (1-101)||(13930684-13930784)
chr1 (1-101)||(14071212-14071312)
chr1 (3-111)||(14390267-14390375)
chr1 (1-101)||(25785975-25786075)
chr1 (3-123)||(50679808-50679928)
chr1 (11-111)||(16217457-16217557)
chr1 (2-98)||(21277002-21277098)
chr1 (1-112)||(48467268-48467378)
chr1 (34-123)||(9592278-9592367)
chr1 (14-111)||(42248304-42248401)
chr1 (1-98)||(47411460-47411557)
chr1 (3-71)||(13568484-13568552)
chr1 (3-111)||(20953297-20953405)
chr1 (34-117)||(19466198-19466281)
chr1 (12-111)||(47136686-47136785)
chr1 (1-120)||(52741495-52741614)
chr1 (3-101)||(34531672-34531770)
chr1 (43-111)||(16218477-16218545)
chr1 (3-71)||(51424260-51424328)
chr1 (1-164)||(13929302-13929465)
chr1 (34-101)||(14169659-14169726)
chr1 (3-69)||(1061337-1061403)
chr1 (3-69)||(33941326-33941392)
chr1 (1-126)||(47560146-47560271)
chr1 (3-88)||(2236822-2236907)
chr1 (44-105)||(19464650-19464711)
chr1 (48-97)||(51726857-51726906)
chr1 (3-111)||(2237977-2238085)
chr1 (5-69)||(9119813-9119877)
chr1 (3-111)||(35683064-35683172)
chr1 (11-111)||(48935109-48935209)
chr1 (2-69)||(14312783-14312850)
chr1 (3-101)||(13642566-13642664)
chr1 (3-69)||(48974447-48974513)
chr1 (44-105)||(14764279-14764340)
chr1 (48-117)||(36509865-36509934)
chr1 (3-111)||(35684202-35684309)
chr1 (11-75)||(40135372-40135436)
chr1 (3-75)||(47512119-47512191)
chr1 (11-66)||(1873898-1873953)
chr1 (3-69)||(1061493-1061559)
chr1 (3-69)||(1898013-1898079)
chr1 (3-65)||(13567175-13567237)
chr1 (3-69)||(34532743-34532809)
chr1 (11-69)||(48934258-48934316)
chr1 (3-67)||(9123442-9123506)
chr1 (52-100)||(22167837-22167885)
chr1 (52-160)||(24516392-24516500)
chr1 (3-75)||(32823467-32823539)
chr1 (5-69)||(44340104-44340168)
chr1 (2-69)||(2973049-2973116)
chr1 (2-81)||(9633783-9633862)
chr1 (12-75)||(32823576-32823639)
chr1 (3-66)||(42244513-42244576)
chr1 (108-186)||(14429868-14429946)
chr1 (107-189)||(19194816-19194898)
chr1 (55-117)||(40811256-40811318)
chr1 (11-75)||(2971715-2971780)
chr1 (53-114)||(21278214-21278275)
chr1 (1-62)||(33793786-33793847)
chr1 (2-75)||(39193589-39193662)
chr1 (11-88)||(48973215-48973292)
chr1 (48-121)||(51725397-51725470)
chr1 (3-75)||(20171197-20171269)
chr1 (3-75)||(27114692-27114764)
chr1 (3-75)||(28309771-28309843)
chr1 (3-71)||(31859600-31859667)
chr1 (3-39)||(33850311-33850347)
chr1 (3-39)||(33943631-33943667)
chr1 (52-160)||(40110602-40110710)
chr1 (3-75)||(47511376-47511448)
chr1 (1-117)||(52742969-52743085)
[»] chr8 (67 HSPs)
chr8 (1-192)||(36939951-36940142)
chr8 (12-126)||(37274905-37275019)
chr8 (1-117)||(36756071-36756187)
chr8 (1-110)||(38589828-38589936)
chr8 (3-123)||(24068339-24068459)
chr8 (11-111)||(31625383-31625483)
chr8 (12-101)||(37472421-37472510)
chr8 (1-101)||(38591016-38591116)
chr8 (1-101)||(43275757-43275857)
chr8 (4-95)||(14820203-14820294)
chr8 (3-117)||(35943916-35944031)
chr8 (11-117)||(117065-117171)
chr8 (1-123)||(29739630-29739752)
chr8 (1-111)||(31623913-31624023)
chr8 (2-111)||(16363811-16363920)
chr8 (52-117)||(20308663-20308728)
chr8 (52-117)||(21095296-21095361)
chr8 (1-101)||(36070185-36070285)
chr8 (3-111)||(45385793-45385901)
chr8 (11-115)||(6843772-6843878)
chr8 (11-109)||(7796809-7796906)
chr8 (3-117)||(19913501-19913615)
chr8 (3-101)||(24069455-24069553)
chr8 (1-103)||(43277928-43278030)
chr8 (1-105)||(4810129-4810232)
chr8 (48-167)||(34616183-34616307)
chr8 (3-117)||(37994-38108)
chr8 (11-109)||(7816090-7816187)
chr8 (2-164)||(35945383-35945545)
chr8 (11-117)||(37324681-37324787)
chr8 (11-117)||(39546670-39546776)
chr8 (1-111)||(41867915-41868025)
chr8 (48-117)||(13367043-13367112)
chr8 (3-164)||(19914852-19915013)
chr8 (3-103)||(3237427-3237526)
chr8 (3-103)||(39515208-39515308)
chr8 (48-111)||(1570205-1570268)
chr8 (44-111)||(27750620-27750687)
chr8 (3-69)||(6844614-6844680)
chr8 (3-69)||(21267173-21267239)
chr8 (63-117)||(36938750-36938804)
chr8 (1-94)||(37323355-37323447)
chr8 (3-110)||(29738300-29738407)
chr8 (52-117)||(2421286-2421351)
chr8 (48-117)||(7486131-7486200)
chr8 (52-101)||(8095404-8095453)
chr8 (48-101)||(37276252-37276305)
chr8 (1-105)||(41866901-41867005)
chr8 (5-82)||(43386730-43386807)
chr8 (141-189)||(31844518-31844566)
chr8 (107-189)||(2075488-2075570)
chr8 (11-109)||(7770899-7770996)
chr8 (11-68)||(7815060-7815117)
chr8 (1-39)||(8395031-8395069)
chr8 (1-163)||(10053691-10053853)
chr8 (3-69)||(13360362-13360428)
chr8 (3-65)||(29441625-29441687)
chr8 (30-80)||(36757260-36757310)
chr8 (11-117)||(45194500-45194606)
chr8 (3-75)||(3612618-3612690)
chr8 (2-75)||(4675760-4675833)
chr8 (1-69)||(10052111-10052179)
chr8 (108-193)||(42793816-42793901)
chr8 (48-157)||(45195757-45195866)
chr8 (12-100)||(4807384-4807472)
chr8 (3-75)||(15989013-15989085)
chr8 (61-101)||(31871462-31871502)
[»] chr4 (92 HSPs)
chr4 (1-118)||(33376225-33376342)
chr4 (1-160)||(31711099-31711258)
chr4 (3-117)||(15446663-15446777)
chr4 (3-185)||(46795951-46796133)
chr4 (1-111)||(33377363-33377473)
chr4 (3-185)||(47667188-47667369)
chr4 (1-117)||(11114973-11115089)
chr4 (1-164)||(21104256-21104419)
chr4 (1-160)||(28103436-28103595)
chr4 (2-117)||(35787804-35787919)
chr4 (1-111)||(1273432-1273541)
chr4 (3-117)||(38370291-38370405)
chr4 (1-195)||(38553936-38554130)
chr4 (2-99)||(26393138-26393235)
chr4 (1-102)||(27408770-27408871)
chr4 (1-118)||(40146615-40146732)
chr4 (12-121)||(44304968-44305077)
chr4 (1-117)||(86810-86926)
chr4 (1-117)||(11113749-11113865)
chr4 (11-111)||(53400202-53400302)
chr4 (20-111)||(5688636-5688727)
chr4 (1-119)||(10403408-10403525)
chr4 (48-126)||(34439644-34439722)
chr4 (1-111)||(37560298-37560408)
chr4 (2-87)||(30682728-30682813)
chr4 (13-101)||(10403298-10403386)
chr4 (3-71)||(15445445-15445513)
chr4 (11-123)||(15787489-15787601)
chr4 (48-111)||(5687229-5687292)
chr4 (12-111)||(26788540-26788639)
chr4 (2-81)||(40143662-40143741)
chr4 (44-166)||(6139047-6139169)
chr4 (3-69)||(26791466-26791531)
chr4 (3-111)||(29833381-29833489)
chr4 (48-100)||(34438460-34438512)
chr4 (3-118)||(48206169-48206284)
chr4 (11-101)||(3217618-3217708)
chr4 (3-69)||(19049913-19049979)
chr4 (1-111)||(37559005-37559115)
chr4 (12-117)||(11094544-11094649)
chr4 (3-88)||(30671003-30671088)
chr4 (44-117)||(38419010-38419083)
chr4 (1-101)||(27410692-27410790)
chr4 (1-101)||(55952833-55952932)
chr4 (33-160)||(307755-307882)
chr4 (3-117)||(30683020-30683134)
chr4 (52-123)||(38417611-38417682)
chr4 (3-69)||(12396915-12396981)
chr4 (3-101)||(48207726-48207824)
chr4 (52-166)||(50531700-50531814)
chr4 (28-193)||(3528224-3528389)
chr4 (48-101)||(17319096-17319149)
chr4 (1-101)||(55953861-55953961)
chr4 (57-117)||(6140353-6140413)
chr4 (1-101)||(6616220-6616320)
chr4 (1-117)||(15786959-15787075)
chr4 (1-117)||(39592282-39592398)
chr4 (3-111)||(44128333-44128441)
chr4 (3-123)||(56001255-56001375)
chr4 (34-117)||(50530543-50530626)
chr4 (11-101)||(56000304-56000394)
chr4 (3-69)||(23752025-23752091)
chr4 (44-98)||(26121920-26121974)
chr4 (3-69)||(28370682-28370748)
chr4 (3-117)||(44302729-44302843)
chr4 (3-69)||(52881971-52882037)
chr4 (3-69)||(53401492-53401558)
chr4 (77-150)||(43895577-43895650)
chr4 (3-101)||(44126605-44126705)
chr4 (3-164)||(52658920-52659081)
chr4 (43-98)||(29663691-29663746)
chr4 (1-188)||(39590948-39591135)
chr4 (28-103)||(52660221-52660296)
chr4 (11-69)||(52880830-52880889)
chr4 (3-69)||(526760-526826)
chr4 (3-65)||(937143-937205)
chr4 (3-69)||(2310823-2310889)
chr4 (3-69)||(30672105-30672171)
chr4 (11-69)||(38555317-38555375)
chr4 (3-65)||(44690900-44690962)
chr4 (1-118)||(29686263-29686380)
chr4 (48-101)||(43419384-43419437)
chr4 (52-117)||(44159143-44159208)
chr4 (6-75)||(56297714-56297783)
chr4 (3-66)||(2309853-2309916)
chr4 (3-75)||(26202421-26202493)
chr4 (49-117)||(31712499-31712567)
chr4 (11-75)||(43894122-43894186)
chr4 (3-59)||(43895648-43895704)
chr4 (3-39)||(44655730-44655766)
chr4 (3-39)||(44664397-44664433)
chr4 (1-101)||(47668606-47668706)
[»] chr7 (85 HSPs)
chr7 (3-118)||(43936132-43936247)
chr7 (1-111)||(19278360-19278470)
chr7 (44-197)||(27897742-27897896)
chr7 (3-97)||(43935194-43935288)
chr7 (3-97)||(7347233-7347327)
chr7 (1-123)||(13446645-13446767)
chr7 (34-118)||(35127850-35127934)
chr7 (12-159)||(24873548-24873695)
chr7 (11-118)||(47163170-47163277)
chr7 (3-101)||(19279621-19279719)
chr7 (1-111)||(22060470-22060580)
chr7 (1-97)||(4858357-4858453)
chr7 (3-103)||(36702786-36702886)
chr7 (3-115)||(41126248-41126360)
chr7 (13-111)||(48754015-48754113)
chr7 (1-117)||(43930326-43930442)
chr7 (2-111)||(48672774-48672883)
chr7 (43-121)||(14206722-14206800)
chr7 (43-121)||(14215412-14215490)
chr7 (1-118)||(22744753-22744870)
chr7 (1-123)||(40926506-40926628)
chr7 (1-111)||(43006392-43006502)
chr7 (2-111)||(22746319-22746428)
chr7 (1-101)||(36702959-36703060)
chr7 (1-97)||(43007662-43007758)
chr7 (1-97)||(18802402-18802498)
chr7 (3-111)||(41618498-41618606)
chr7 (1-164)||(14107839-14108002)
chr7 (1-164)||(14417796-14417959)
chr7 (2-117)||(38406026-38406141)
chr7 (3-65)||(13446388-13446450)
chr7 (3-81)||(17288249-17288327)
chr7 (3-77)||(18801224-18801298)
chr7 (3-77)||(19848867-19848941)
chr7 (3-101)||(36673845-36673943)
chr7 (3-69)||(38002555-38002621)
chr7 (1-75)||(41516379-41516453)
chr7 (1-111)||(46674933-46675043)
chr7 (1-101)||(25153665-25153765)
chr7 (11-160)||(41515014-41515162)
chr7 (1-117)||(4857208-4857324)
chr7 (49-117)||(26406180-26406248)
chr7 (3-111)||(30222655-30222763)
chr7 (2-69)||(33341306-33341373)
chr7 (13-81)||(33459572-33459640)
chr7 (11-103)||(34557414-34557506)
chr7 (11-123)||(45721753-45721865)
chr7 (3-69)||(1884249-1884315)
chr7 (1-111)||(22061794-22061904)
chr7 (3-69)||(41616633-41616699)
chr7 (48-110)||(46458713-46458775)
chr7 (11-100)||(7148068-7148157)
chr7 (1-110)||(25154936-25155045)
chr7 (43-100)||(45719664-45719721)
chr7 (5-77)||(1970824-1970896)
chr7 (12-164)||(25532164-25532314)
chr7 (3-103)||(38001513-38001613)
chr7 (59-123)||(43931853-43931917)
chr7 (11-103)||(46457087-46457179)
chr7 (34-101)||(27899223-27899290)
chr7 (3-69)||(1885282-1885348)
chr7 (2-160)||(28326340-28326497)
chr7 (3-69)||(30224017-30224083)
chr7 (1-111)||(33458317-33458426)
chr7 (3-69)||(34558342-34558408)
chr7 (1-101)||(38408283-38408383)
chr7 (1-96)||(48671085-48671179)
chr7 (52-103)||(10256181-10256232)
chr7 (52-166)||(10257332-10257444)
chr7 (3-66)||(48755592-48755655)
chr7 (11-69)||(2903061-2903119)
chr7 (3-69)||(7345923-7345989)
chr7 (3-69)||(18670544-18670610)
chr7 (3-69)||(21171527-21171593)
chr7 (1-75)||(28325080-28325153)
chr7 (59-101)||(35128200-35128242)
chr7 (3-65)||(35480217-35480278)
chr7 (11-69)||(41127212-41127270)
chr7 (11-121)||(45089489-45089598)
chr7 (44-97)||(35315235-35315288)
chr7 (16-101)||(46673512-46673596)
chr7 (13-101)||(7146799-7146886)
chr7 (11-75)||(8439783-8439847)
chr7 (3-75)||(33228856-33228928)
chr7 (3-75)||(37373543-37373615)
[»] chr2 (64 HSPs)
chr2 (59-239)||(25569834-25570011)
chr2 (3-111)||(12852895-12853003)
chr2 (3-164)||(6706935-6707096)
chr2 (12-118)||(6209057-6209162)
chr2 (1-123)||(23178869-23178991)
chr2 (1-123)||(23590126-23590248)
chr2 (11-118)||(1624968-1625074)
chr2 (1-111)||(42028957-42029067)
chr2 (1-117)||(23177680-23177797)
chr2 (1-117)||(23588937-23589054)
chr2 (3-83)||(12854131-12854211)
chr2 (11-111)||(15650458-15650558)
chr2 (53-164)||(40174711-40174821)
chr2 (16-126)||(21012064-21012174)
chr2 (3-71)||(10477351-10477419)
chr2 (48-117)||(14509263-14509332)
chr2 (1-117)||(7036973-7037089)
chr2 (3-110)||(37869040-37869147)
chr2 (3-101)||(42027202-42027300)
chr2 (3-118)||(42246600-42246715)
chr2 (3-69)||(3254865-3254931)
chr2 (11-101)||(4829482-4829572)
chr2 (1-75)||(7038367-7038441)
chr2 (1-123)||(12958424-12958545)
chr2 (3-65)||(33837800-33837862)
chr2 (1-123)||(37867763-37867885)
chr2 (11-71)||(4630123-4630183)
chr2 (52-112)||(14510507-14510567)
chr2 (1-101)||(34039270-34039370)
chr2 (13-80)||(2583576-2583643)
chr2 (52-123)||(3533613-3533684)
chr2 (34-101)||(7490204-7490271)
chr2 (13-111)||(2581822-2581920)
chr2 (3-69)||(5564068-5564134)
chr2 (3-69)||(5565186-5565252)
chr2 (2-75)||(42368343-42368415)
chr2 (11-111)||(2305557-2305657)
chr2 (11-103)||(4628899-4628991)
chr2 (12-100)||(11386642-11386730)
chr2 (2-117)||(28109862-28109977)
chr2 (2-69)||(3666309-3666376)
chr2 (3-69)||(3665233-3665299)
chr2 (3-69)||(15268390-15268456)
chr2 (3-101)||(29424621-29424719)
chr2 (11-69)||(33836786-33836844)
chr2 (44-105)||(3532244-3532305)
chr2 (11-91)||(10367256-10367336)
chr2 (1-121)||(10368374-10368494)
chr2 (11-71)||(3255917-3255977)
chr2 (3-75)||(27264608-27264680)
chr2 (11-75)||(35799529-35799593)
chr2 (3-71)||(41312509-41312577)
chr2 (3-66)||(41313311-41313374)
chr2 (3-69)||(2306702-2306767)
chr2 (3-69)||(14482132-14482198)
chr2 (3-69)||(17179069-17179135)
chr2 (48-118)||(35801037-35801107)
chr2 (3-64)||(14573854-14573915)
chr2 (48-117)||(15850652-15850721)
chr2 (1-69)||(41795993-41796061)
chr2 (91-151)||(8538583-8538643)
chr2 (11-91)||(12959724-12959804)
chr2 (3-75)||(15816701-15816773)
chr2 (3-75)||(43015548-43015620)
[»] chr3 (90 HSPs)
chr3 (1-110)||(43101901-43102010)
chr3 (11-113)||(47808103-47808205)
chr3 (1-111)||(54653965-54654075)
chr3 (3-111)||(11219439-11219547)
chr3 (3-123)||(11220645-11220765)
chr3 (3-111)||(29536723-29536831)
chr3 (3-118)||(47855330-47855445)
chr3 (1-103)||(51825628-51825730)
chr3 (3-164)||(8372562-8372723)
chr3 (3-193)||(48252942-48253132)
chr3 (6-118)||(13077943-13078055)
chr3 (2-123)||(25585820-25585941)
chr3 (1-117)||(26798899-26799015)
chr3 (12-164)||(32980398-32980550)
chr3 (3-118)||(7820399-7820514)
chr3 (1-117)||(8371227-8371343)
chr3 (1-105)||(53808325-53808429)
chr3 (1-111)||(42632713-42632823)
chr3 (1-101)||(42633895-42633995)
chr3 (11-71)||(39190763-39190823)
chr3 (3-111)||(41386139-41386247)
chr3 (3-111)||(53049036-53049144)
chr3 (13-160)||(19252952-19253099)
chr3 (48-167)||(43345373-43345492)
chr3 (1-118)||(10987645-10987762)
chr3 (44-117)||(23559869-23559942)
chr3 (1-101)||(49122011-49122111)
chr3 (5-90)||(51401371-51401456)
chr3 (3-111)||(32974222-32974330)
chr3 (3-83)||(32979097-32979177)
chr3 (11-111)||(47806835-47806934)
chr3 (3-111)||(53047906-53048014)
chr3 (28-111)||(2124063-2124146)
chr3 (4-111)||(39287480-39287587)
chr3 (1-111)||(51824133-51824243)
chr3 (3-69)||(7822027-7822093)
chr3 (1-111)||(41387432-41387542)
chr3 (1-167)||(53809436-53809602)
chr3 (1-117)||(25583121-25583237)
chr3 (12-185)||(47766876-47767048)
chr3 (3-88)||(48825821-48825906)
chr3 (11-71)||(48034026-48034086)
chr3 (1-116)||(19622012-19622127)
chr3 (3-118)||(29537134-29537249)
chr3 (59-166)||(35173212-35173319)
chr3 (2-101)||(43103305-43103404)
chr3 (15-118)||(49334329-49334432)
chr3 (3-69)||(19579229-19579295)
chr3 (3-69)||(32973148-32973214)
chr3 (3-69)||(39288480-39288546)
chr3 (3-65)||(40502260-40502322)
chr3 (3-69)||(48035365-48035431)
chr3 (3-101)||(51400224-51400322)
chr3 (3-69)||(52293564-52293630)
chr3 (3-88)||(19579316-19579401)
chr3 (34-111)||(36626771-36626848)
chr3 (52-109)||(43346448-43346505)
chr3 (3-71)||(7583479-7583547)
chr3 (1-69)||(39133024-39133092)
chr3 (3-71)||(53347038-53347105)
chr3 (1-101)||(54752623-54752723)
chr3 (3-66)||(33563958-33564021)
chr3 (3-66)||(35633236-35633299)
chr3 (3-69)||(1301041-1301107)
chr3 (3-69)||(5416207-5416273)
chr3 (3-101)||(11482996-11483094)
chr3 (3-69)||(46446378-46446444)
chr3 (3-65)||(52292603-52292665)
chr3 (11-69)||(53342733-53342791)
chr3 (3-65)||(55015662-55015724)
chr3 (3-69)||(55443591-55443657)
chr3 (2-167)||(17345319-17345483)
chr3 (3-71)||(2225063-2225131)
chr3 (1-69)||(17350143-17350211)
chr3 (11-123)||(19622906-19623018)
chr3 (3-75)||(30431384-30431456)
chr3 (113-193)||(45422082-45422162)
chr3 (52-103)||(21127983-21128034)
chr3 (2-97)||(48254902-48254995)
chr3 (14-69)||(52705349-52705404)
chr3 (11-66)||(55442611-55442666)
chr3 (107-189)||(143096-143178)
chr3 (3-61)||(5417097-5417155)
chr3 (107-189)||(21515376-21515458)
chr3 (11-117)||(35174375-35174481)
chr3 (3-53)||(47854519-47854569)
chr3 (52-101)||(12060716-12060765)
chr3 (2-75)||(30838505-30838578)
chr3 (8-117)||(47765453-47765561)
chr3 (3-75)||(51214201-51214273)
[»] scaffold0051 (2 HSPs)
scaffold0051 (40-123)||(22173-22256)
scaffold0051 (2-81)||(39930-40009)
[»] scaffold0369 (1 HSPs)
scaffold0369 (2-105)||(12918-13021)
[»] scaffold1974 (1 HSPs)
scaffold1974 (1-117)||(621-737)
[»] scaffold1878 (1 HSPs)
scaffold1878 (1-117)||(537-653)
[»] scaffold0290 (2 HSPs)
scaffold0290 (1-117)||(9471-9587)
scaffold0290 (1-164)||(8386-8549)
[»] scaffold0025 (2 HSPs)
scaffold0025 (1-92)||(56718-56809)
scaffold0025 (1-81)||(54598-54678)
[»] scaffold0178 (2 HSPs)
scaffold0178 (3-118)||(2257-2372)
scaffold0178 (11-117)||(1229-1334)
[»] scaffold0177 (1 HSPs)
scaffold0177 (3-111)||(1764-1872)
[»] scaffold2127 (1 HSPs)
scaffold2127 (12-111)||(514-613)
[»] scaffold0155 (1 HSPs)
scaffold0155 (3-70)||(5178-5245)
[»] scaffold0098 (1 HSPs)
scaffold0098 (54-164)||(42292-42402)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-118)||(145861-145978)
[»] scaffold0046 (2 HSPs)
scaffold0046 (3-123)||(24802-24922)
scaffold0046 (5-82)||(23417-23494)
[»] scaffold0045 (2 HSPs)
scaffold0045 (1-113)||(77178-77290)
scaffold0045 (11-62)||(75762-75813)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-167)||(72929-73095)
[»] scaffold0084 (1 HSPs)
scaffold0084 (3-160)||(11715-11872)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-103)||(96167-96269)
[»] scaffold0038 (2 HSPs)
scaffold0038 (3-69)||(25931-25997)
scaffold0038 (12-66)||(26960-27014)
[»] scaffold1827 (1 HSPs)
scaffold1827 (12-69)||(1100-1156)
[»] scaffold0166 (1 HSPs)
scaffold0166 (44-112)||(4216-4284)
[»] scaffold0002 (1 HSPs)
scaffold0002 (17-69)||(458501-458553)
[»] scaffold0687 (1 HSPs)
scaffold0687 (11-68)||(6606-6663)
[»] scaffold0630 (1 HSPs)
scaffold0630 (3-69)||(2019-2085)
[»] scaffold0064 (1 HSPs)
scaffold0064 (3-69)||(20623-20689)
[»] scaffold0839 (1 HSPs)
scaffold0839 (2-75)||(160-233)


Alignment Details
Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 20 - 332
Target Start/End: Complemental strand, 38473645 - 38473335
Alignment:
Q  20 tttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaatttttta 119  Q
    ||||||||||| ||||||||  ||||| | |||||||||| ||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||    
T  38473645 tttttagatttcattttggtcatctaactgtaaagtgtcttaatttggtcccataaatcttctgtcgtttactattttggtcatttccgttaatttttta 38473546  T
Q  120 atgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatcaacacttgannnnnnnnacagttttcttcat 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||        ||| ||||||||||    
T  38473545 atgtatattaatcttgatatcattttaaccacttgattgcaggtctatagtatctaagagtgaaccatcaacacttga--ttttttacaattttcttcat 38473448  T
Q  220 cttctctcttcatcatactatgccgaacatcaaatatgcataaccaaaaaatacatcaaatcctaaaatcttaaaacacatcaacagacaataacacctt 319  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  38473447 cttctctcttcatcatactatgcagaacttcaaatatgcataaccaaaaaatacatcaaatcctaaaatcttaaaacacatcaatagacaataacacctt 38473348  T
Q  320 ctttaaccctcat 332  Q
    |||||||||||||    
T  38473347 ctttaaccctcat 38473335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 15613522 - 15613629
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 110  Q
    |||||||||||||| ||||| ||||||||  ||||| |||||||||||||||||||||| ||||||||||||  ||||||||||||||||| ||| ||||    
T  15613522 cttaacttatttttggatttcattttggtcttctaactataaagtgtctcaatttggtcccataaatcttcttccgtttactattttggtcctctccgtt 15613621  T
Q  111 aatttttt 118  Q
    ||||||||    
T  15613622 aatttttt 15613629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 1273096 - 1273259
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| ||||| |||||||| | ||| |||||||| || ||| |||||| ||||||||||||||| |||||||||||||  |||||| ||||||||    
T  1273096 catttggtcccttaatttatttttggttttcattttggtcctttaactataaaatgtctcaatttggtcccataaatcttctgcagtttacaattttggt 1273195  T
Q  101 catcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 164  Q
    |  || ||||| ||||||||||| || || | ||||||| |||| ||||| | |||||||||||    
T  1273196 cccctccgttagttttttaatgtttaatatttttgatatgatttcaaccattcgattgcaggtc 1273259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 19523990 - 19524152
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | ||| | |||||| |  ||| ||||||||||||||||||||||| |||||| ||||||||||||| ||||||||    
T  19523990 catttggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggtct-ataaattttctgtcgtttaccattttggt 19524088  T
Q  101 catcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 164  Q
    ||| | ||||  ||||||||||| || |||| |||||||  |||| |||| | |||||||||||    
T  19524089 catgtccgtttgttttttaatgtctaataattttgatattgttttgaccattcgattgcaggtc 19524152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 42980816 - 42980701
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    |||| ||| |||| |||||||||||||| |||||||| || ||| ||||||||||||||||||||||||||| |||||||| | ||||| |||||||||     
T  42980816 tttgatcttttaatttatttttagatttcattttggtcctataactataaagtgtctcaatttggtctcatatatcttctgccatttaccattttggtcc 42980717  T
Q  103 tcttcgttaatttttt 118  Q
    | | ||||||||||||    
T  42980716 tttccgttaatttttt 42980701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 15615067 - 15614969
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||||| |||| ||||||||| ||||| |||||||| | |||| |||||||||||||||||||||  ||||||| ||||| |||||||||||||||||    
T  15615067 tttggtcccttatcttatttttggatttcattttggtccgctaactataaagtgtctcaatttggttccataaattttctgccgtttactattttggtc 15614969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 19827249 - 19827127
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||| |||||||||||||||||| | ||| | |||||| |  |||||||||||||||||||||||||| ||||||||||||  ||||||| ||||||||    
T  19827249 catttagtctcttaacttatttttggttttcaatttggtcccataattataaagtgtctcaatttggtcccataaatcttcttccgtttaccattttggt 19827150  T
Q  101 catcttcgttaattttttaatgt 123  Q
    ||  | ||||  |||||||||||    
T  19827149 cacatccgtttgttttttaatgt 19827127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 27894130 - 27894033
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||| ||||||||||||||||||| ||| ||||||||||||||||||    
T  27894130 tttggtcgcttaacttattttttgttttcactttggtcccctaactataaagtgtttcaatttggtctcataaattttccgtcgtttactattttggt 27894033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 5382949 - 5383065
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | |||   ||||||   ||||||||||||||||||||||||||| ||||||||||  |||||||||||||||| |    
T  5382949 catttggtcccttaacttatttttggttttctatttggtctcctaattataaagtgtctcaatttggtcccataaatctttggtcgtttactattttgat 5383048  T
Q  101 catcttcgttaattttt 117  Q
    | ||| ||||| |||||    
T  5383049 cctctccgttagttttt 5383065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 43 - 167
Target Start/End: Complemental strand, 5384413 - 5384289
Alignment:
Q  43 ctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcat 142  Q
    |||| |||||||||||||||||||||| |||||||||||   ||||||||||||||||| ||| ||||| ||||||||||| || || | ||||||| ||    
T  5384413 ctaactataaagtgtctcaatttggtcccataaatcttcgtccgtttactattttggtcctctccgttagttttttaatgtttaatatttttgatataat 5384314  T
Q  143 tttaaccacttgattgcaggtctat 167  Q
    || ||||| | ||||| || |||||    
T  5384313 ttcaaccattcgattgtagatctat 5384289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 18677983 - 18678083
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | ||| | |||| | | |||| |||||||||||||||||||||| |||||||||||||||||||||  |||||||    
T  18677983 catttggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtctcaatttggtcccataaatcttctgtcgtttaccgttttggt 18678082  T
Q  101 c 101  Q
    |    
T  18678083 c 18678083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 42979471 - 42979571
Alignment:
Q  17 ttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaatttt 116  Q
    |||||||| ||||| |||||||| |||||| |||||||||| |||||||||||  |||| ||||||| ||||||||||||||||| ||| |||| |||||    
T  42979471 ttatttttggatttcattttggtcctctaactataaagtgtttcaatttggtccaataattcttctgccgtttactattttggtcctctccgttgatttt 42979570  T
Q  117 t 117  Q
    |    
T  42979571 t 42979571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 5975763 - 5975922
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    |||||||||  |||||||||||||   ||| |||||||| | ||||||||||||||||||||||||||||||||| |||||    |||||||||| ||||    
T  5975763 catttggtcctttaacttattttttattttaattttggtcccctaattataaagtgtctcaatttggtctcataagtcttcctctgtttactattgtggt 5975862  T
Q  101 catcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgca 160  Q
      |||  |||| ||||||||||| ||    | ||||||| |||||||||| |||||||||    
T  5975863 tctctctgttagttttttaatgtctaaagtttttgatatgattttaaccatttgattgca 5975922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19525397 - 19525288
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | ||| | |||||| | |||| ||||||||||||| |||||||| ||||| ||||||| ||||||| ||||||||    
T  19525397 catttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctccatttggtcacataagtcttctgccgtttaccattttggt 19525298  T
Q  101 catcttcgtt 110  Q
    | ||| ||||    
T  19525297 cctctccgtt 19525288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 1663194 - 1663306
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||| ||| |||||||||||||| ||||| | |||| | |  ||| |||||||||||| |||||||||  |||||||||||| ||||||||||||||||    
T  1663194 catttagtcccttaacttatttttggatttcactttgatccattaactataaagtgtcttaatttggtcctataaatcttctgccgtttactattttggt 1663293  T
Q  101 catcttcgttaat 113  Q
    | ||| |||||||    
T  1663294 cttctccgttaat 1663306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 15509204 - 15509312
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||  |||||||||||||| | |||| |||||||||||||||||||||| | ||  ||||||| ||||  |||||||||||     
T  15509204 tttggtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctattttggtcc 15509303  T
Q  103 tcttcgtta 111  Q
    ||| |||||    
T  15509304 tctccgtta 15509312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 15857680 - 15857605
Alignment:
Q  48 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgt 123  Q
    |||||||||| |||||||| || |||||||||| |||||||||| ||||||||||||| ||||| |||||||||||    
T  15857680 tataaagtgtttcaatttgttcccataaatcttatgtcgtttaccattttggtcatctccgttagttttttaatgt 15857605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 123
Target Start/End: Complemental strand, 224695 - 224577
Alignment:
Q  5 tggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatc 104  Q
    ||||| |||||||||||||  | ||| |||||||| | |||| |||||||||||||||||||||||||||| |||||   || |||||| | | ||||||    
T  224695 tggtcccttaacttattttatgttttcattttggtcccctaactataaagtgtctcaatttggtctcataagtcttcctccgattactaatgtagtcatc 224596  T
Q  105 ttcgttaattttttaatgt 123  Q
    | ||||| |||||||||||    
T  224595 tccgttagttttttaatgt 224577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 7345489 - 7345399
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||||||||||||  |||| |||||||| |||||| |||||||||||||||||||||| ||||||| || |||||||  || ||||||||    
T  7345489 cttaacttatttttgaatttcattttggtcctctaactataaagtgtctcaatttggtcccataaatattttgtcgttatctcttttggtc 7345399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 12936211 - 12936089
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||| ||| |||||||||||||| | ||| |||||||| | |||| ||||||||||||||||||||||  |||| |||| ||  |||||| ||||||||    
T  12936211 catttagtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtccaataagtcttatgctgtttaccattttggt 12936112  T
Q  101 catcttcgttaattttttaatgt 123  Q
    ||| | ||||  |||||||||||    
T  12936111 catttccgtttgttttttaatgt 12936089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 18693707 - 18693805
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||||| ||||||||||||||  ||||||||||||| |  ||| |||||| ||||||||| ||||| ||||||||||||||||||  || ||||||||    
T  18693707 tttggtcccttaacttatttttgaattttattttggtcccttaactataaaatgtctcaatctggtcccataaatcttctgtcgttacctcttttggtc 18693805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 21387646 - 21387744
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||||| ||||||||||||||  |||| |||||||| | |||| |||||| ||||||||||||||| ||||||||||||| ||||  || ||||||||    
T  21387646 tttggtcccttaacttatttttgaatttcattttggtcccctaactataaaatgtctcaatttggtcccataaatcttctgccgttacctcttttggtc 21387744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 40058027 - 40058141
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    |||| ||||||||||||||||| | ||| |||||| | |  ||| ||| |||||| |||| |||||||||||| ||||||| ||||||| ||||||||||    
T  40058027 tttgatctcttaacttatttttggttttcattttgatcccttaactattaagtgtttcaaattggtctcataactcttctgccgtttaccattttggtca 40058126  T
Q  103 tcttcgttaattttt 117  Q
    ||| ||||| |||||    
T  40058127 tctccgttagttttt 40058141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 42510168 - 42510237
Alignment:
Q  48 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 117  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||  ||| ||||| |||||    
T  42510168 tataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggttctctccgttagttttt 42510237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 4568081 - 4567973
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| |||||||||||||||||||||| | ||  ||||||| | ||  ||||||||||||    
T  4568081 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgcctttacctattttggtca 4567982  T
Q  103 tcttcgtta 111  Q
    ||| |||||    
T  4567981 tctccgtta 4567973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 12933758 - 12933858
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||| ||| |||||||||||||| | ||| |||||| | | |||| ||||||||||||||||||| |||||||| ||||||| ||||||| |||| |||    
T  12933758 catttagtcccttaacttatttttggttttcattttgatcccctaactataaagtgtctcaatttgatctcataagtcttctgccgtttaccatttcggt 12933857  T
Q  101 c 101  Q
    |    
T  12933858 c 12933858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 22812496 - 22812332
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| ||||||||||||||   ||| ||||| || |  ||| |||||| ||||||| |||| || |||||||||||||  |||||||||||||||    
T  22812496 catttggtcccttaacttattttttattttcattttagtcccttaactataaaatgtctcactttgatcccataaatcttctgcagtttactattttggt 22812397  T
Q  101 catcttcgtta-attttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 164  Q
    |  || |||||  ||||||||||| || || | ||||||| |||| ||||| | |||||||||||    
T  22812396 cccctccgttagtttttttaatgtttaatatttttgatatgatttcaaccattcgattgcaggtc 22812332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 8762507 - 8762392
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||||  ||| | |||||| |  | | |||||| ||||||||||||||| ||||||| || |||||||||||||||| |||     
T  8762507 tttggtcccttaacttatttttaattttcaatttggtcccatgactataaaatgtctcaatttggtcacataaattttatgtcgtttactattttagtcc 8762408  T
Q  103 tcttcgttaatttttt 118  Q
    ||| ||||||| ||||    
T  8762407 tctccgttaatatttt 8762392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 12950369 - 12950206
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||| ||| |||||||||||| | | ||| |||||||| | |||| ||||||||||||||||||||||  |||| |||| ||  |||||| ||||||||    
T  12950369 catttagtcccttaacttatttatggttttcattttggtcccctaactataaagtgtctcaatttggtccaataagtcttatgatgtttaccattttggt 12950270  T
Q  101 catcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 164  Q
    ||| | ||||  ||||||||||| || || | || ||||  ||| ||||| |||||||| ||||    
T  12950269 catttccgtttgttttttaatgtttactattttttatattgtttcaaccatttgattgctggtc 12950206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 32521703 - 32521758
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 66  Q
    ||||||||||||||||||||||||||||| | |||| |||||||||||||||||||    
T  32521703 cttaacttatttttagattttattttggtcccctaactataaagtgtctcaatttg 32521758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 5061037 - 5061103
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||| ||||| |||||||| | ||||| |||||||||||||||||||||    
T  5061037 tttggtcccttaacttatttttggatttcattttggtcccctaatgataaagtgtctcaatttggtc 5061103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 26403325 - 26403414
Alignment:
Q  12 ttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||||||||||| |||||| | |||||| |  ||| ||||||||||||||||||| |||||||||| || ||||||||||||||||||||    
T  26403325 ttaacttattttt-gattttcaatttggtcccttaactataaagtgtctcaatttgatctcataaattttatgtcgtttactattttggtc 26403414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 12947919 - 12948019
Alignment:
Q  1 catttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttgg 99  Q
    ||||| ||| |||||||||||||| |||||| |||||| | | |||| ||||||||||||||||||| |||||||| |||| |||||||||| |||| ||    
T  12947919 catttagtcccttaacttattttt-gattttcattttgatcccctaactataaagtgtctcaatttgatctcataagtcttatgtcgtttaccatttcgg 12948017  T
Q  100 tc 101  Q
    ||    
T  12948018 tc 12948019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 26404292 - 26404219
Alignment:
Q  28 ttttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||| |||||| || ||| ||||||||||||||||||| || |||||||||| |||| |||||||||||||||    
T  26404292 ttttaatttggtcctttaactataaagtgtctcaatttgatcccataaatcttatgtcatttactattttggtc 26404219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 18695754 - 18695634
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| ||||| |||||||| | ||| |||||  | |  ||| |||||||||||||||||||||| ||||| |||||   ||||||||| | ||||||    
T  18695754 tttggtcccttaatttatttttggttttcattttattcccttaactataaagtgtctcaatttggtcccataagtcttcatccgtttactaatatggtca 18695655  T
Q  103 tcttcgttaattttttaatgt 123  Q
    ||| ||||| |||||||||||    
T  18695654 tctccgttagttttttaatgt 18695634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 53 - 117
Target Start/End: Original strand, 32734190 - 32734254
Alignment:
Q  53 agtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 117  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||||||||||| | ||||| |||||    
T  32734190 agtgtcttaatttggtcccataactcttctgtcgtttactattttggtcatttccgttagttttt 32734254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 10084667 - 10084722
Alignment:
Q  63 tttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaatttttt 118  Q
    |||||||||||||||||| |||||||||||||||||||| ||| ||||||| ||||    
T  10084667 tttggtctcataaatcttttgtcgtttactattttggtcctctccgttaatatttt 10084722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 10085954 - 10085844
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctct-aattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttgg 99  Q
    ||||||||| ||||||||||||||  |||| | |||||| |||| || | |||||||| ||||||||||| |||||||||||||   |||||||||||||    
T  10085954 catttggtcccttaacttatttttgaatttcactttggt-ctcttaactttaaagtgtttcaatttggtcccataaatcttctgctatttactattttgg 10085856  T
Q  100 tcatcttcgtta 111  Q
    || ||| |||||    
T  10085855 tcctctccgtta 10085844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 4566960 - 4567062
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||| ||||||  ||||| |||||| | | |||| |||||||||||||||||||||| | ||  ||||||||||||  || |||||||||    
T  4566960 tttggtcccttaacatattttcggatttcattttgatcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtca 4567059  T
Q  103 tct 105  Q
    |||    
T  4567060 tct 4567062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 5062293 - 5062227
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| ||||||||||||||  |||| |||||||| | ||||| |||||||||||||||||||||    
T  5062293 tttggtcccttaacttatttttgaatttcattttggtcccctaatgataaagtgtctcaatttggtc 5062227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 12830996 - 12830931
Alignment:
Q  52 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 117  Q
    ||||||||||||||||||  |||| |||||||  |||||||||||||||| ||| |||||||||||    
T  12830996 aagtgtctcaatttggtcctataactcttctgctgtttactattttggtcctctccgttaattttt 12830931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 12862976 - 12862911
Alignment:
Q  52 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 117  Q
    ||||||||||||||||||  |||| |||||||  |||||||||||||||| ||| |||||||||||    
T  12862976 aagtgtctcaatttggtcctataactcttctgctgtttactattttggtcctctccgttaattttt 12862911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 101
Target Start/End: Complemental strand, 22819607 - 22819558
Alignment:
Q  52 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  22819607 aagtgtctcaatttggtcccataactcttctgccgtttactattttggtc 22819558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 1273447 - 1273383
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttgg 67  Q
    ||||||| |||||||||||||| | ||| |||||||| |  ||||||||||||||||||||||||    
T  1273447 tttggtcccttaacttatttttggttttcattttggtcccttaattataaagtgtctcaatttgg 1273383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 341 - 381
Target Start/End: Complemental strand, 38473316 - 38473276
Alignment:
Q  341 tccatagaaatttatcaataataatcaacaacaaaatcatc 381  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  38473316 tccatagaaatttatcaataataatcatcaacaaaatcatc 38473276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 40059436 - 40059320
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||| |||||||||||||| | ||| |||||| | | |||| ||| |||||| | || ||||||  |||| ||||||| ||||||  ||||||||     
T  40059436 atttggtcccttaacttatttttggttttcattttgatcccctaactattaagtgttttaaattggtccaataactcttctgccgtttatcattttggtg 40059337  T
Q  102 atcttcgttaatttttt 118  Q
    |||| ||||||||||||    
T  40059336 atctccgttaatttttt 40059320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 15510370 - 15510304
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||  ||||| |||||| | | |||| ||||||||||||||||||||||    
T  15510370 tttggtcccttaacttattttcggatttcattttgatcccctaactataaagtgtctcaatttggtc 15510304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 22819564 - 22819510
Alignment:
Q  63 tttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 117  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||| ||||| |||||    
T  22819564 tttggtcccataactcttctgccgtttactattttggtcatctccgttagttttt 22819510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 26912437 - 26912347
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||||||||| | ||| |||||||||  |||||||||||||| || ||||| |||  |||| |||||| |||||||| ||| |||||    
T  26912437 cttaacttattttttgttttcattttggtttcctaattataaagtgacttaatttagtcctataattcttctatcgtttacaattgtggtc 26912347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 32522029 - 32521963
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||||||||| |||||||  ||||| |||||||| | |||| |||| |||||||||||||||||    
T  32522029 tttggtctcttaatttattttcggatttcattttggtcccctaactatagagtgtctcaatttggtc 32521963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 166
Target Start/End: Complemental strand, 32735545 - 32735423
Alignment:
Q  44 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcatt 143  Q
    ||||||| || ||| | ||||||||| ||||| ||||||| |||||| ||||||||||||||  |||| | ||||||||| || || | || |||| |||    
T  32735545 taattattaaatgttttaatttggtcccataactcttctgccgtttattattttggtcatctctgttagtattttaatgtctaatattttttatataatt 32735446  T
Q  144 ttaaccacttgattgcaggtcta 166  Q
    | |||   |||||||||||||||    
T  32735445 tcaacagtttgattgcaggtcta 32735423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 42511728 - 42511650
Alignment:
Q  48 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtata 126  Q
    ||||||||||||||||||| |  ||||||||||||| ||||| |||||||||  |||| ||||  |||| |||||||||    
T  42511728 tataaagtgtctcaatttgcttccataaatcttctgccgtttcctattttggctatctccgttggttttctaatgtata 42511650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 326398 - 326451
Alignment:
Q  48 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||||||||||||||||  |||||||||||||| |||||  |||||||||    
T  326398 tataaagtgtctcaatttggttgcataaatcttctgttgtttatcattttggtc 326451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 101
Target Start/End: Complemental strand, 2167572 - 2167523
Alignment:
Q  52 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||| ||||||||||| ||||||||||||| |||||| ||||||||||    
T  2167572 aagtgtttcaatttggtcccataaatcttctgccgtttattattttggtc 2167523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 22650726 - 22650669
Alignment:
Q  12 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  22650726 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 22650669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 38471307 - 38471412
Alignment:
Q  12 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 111  Q
    |||||||||||||  |||| |||||||| |  ||| | |||| ||| ||||||||||  ||||||||||||  ||||||||||||||||  |||  ||||    
T  38471307 ttaacttatttttgaatttcattttggtcccttaactttaaattgtttcaatttggttccataaatcttcttccgtttactattttggttctctctgtta 38471406  T
Q  112 attttt 117  Q
    ||||||    
T  38471407 attttt 38471412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 20988699 - 20988767
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 71  Q
    ||||||| |||||||||||||   |||| |||||||| | |||| |||||||||||||||||| |||||    
T  20988699 tttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttagtctc 20988767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 24761787 - 24761719
Alignment:
Q  44 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaa 112  Q
    ||||||| ||||||||||||||| |||||||| || |||| ||||||| |||||| || ||| ||||||    
T  24761787 taattattaagtgtctcaatttgatctcataactcgtctgccgtttaccattttgttcctctccgttaa 24761719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 15153886 - 15153952
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| ||||||||||||||  |||||| |||||| || ||| | |||| |||||||||||||||    
T  15153886 tttggtcccttaacttatttttgaattttaatttggtcctttaactttaaactgtctcaatttggtc 15153952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 19050758 - 19050824
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||| ||||| | |||||| | |||| | |||| |||||||||||||||    
T  19050758 tttggtcccttaacttatttttggatttcaatttggtcccctaactttaaactgtctcaatttggtc 19050824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 21389200 - 21389130
Alignment:
Q  53 agtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgt 123  Q
    ||||||||||||||||| ||||| |||||   ||||||||| | ||||| ||| ||||| |||||||||||    
T  21389200 agtgtctcaatttggtcccataagtcttcctccgtttactaatatggtcctctccgttagttttttaatgt 21389130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 24805298 - 24805335
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttgg 38  Q
    |||||||||||||||||||||||| | |||||||||||    
T  24805298 catttggtctcttaacttatttttggtttttattttgg 24805335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 1982721 - 1982793
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    ||||||| ||||||||||||||  ||||||||||||| |  ||| | |||| | ||||||||||||| |||||    
T  1982721 tttggtcccttaacttatttttgaattttattttggtcccttaactttaaactatctcaatttggtcccataa 1982793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 12952841 - 12952769
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    ||||||| ||||||||||||||| |||| |||||||| |  ||| | ||||  |||||||||||||| |||||    
T  12952841 tttggtcccttaacttatttttaaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 12952769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 28237000 - 28236928
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    ||||||| ||||||||||||||  |||| ||||| || || ||||| ||||  |||||||||| |||||||||    
T  28237000 tttggtcccttaacttatttttgaatttcattttagtcctttaattttaaaccgtctcaatttagtctcataa 28236928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 37371066 - 37371138
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    ||||||| ||||||||||||||  |||| |||||||| |  ||| | |||| ||||||||||||||| |||||    
T  37371066 tttggtcccttaacttatttttgaatttcattttggtcccttaactttaaattgtctcaatttggtcccataa 37371138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 185; Significance: 1e-100; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 381
Target Start/End: Complemental strand, 48565 - 48196
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| ||||| |||||||| || ||| ||||||||||||||||||| || ||||||| ||||| |||||||| |||||||    
T  48565 catttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataaatattctgccgtttactcttttggt 48466  T
Q  101 catcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatcaacacttgannn 200  Q
    ||||| ||||||||||||||  ||||||| ||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||       
T  48465 catctccgttaattttttaaaatatattattcttgatataattttaaccacttgattgcaggtctatagtatctaagagtgaaccatcaacacttga--t 48368  T
Q  201 nnnnnacagttttcttcatcttctctcttcatcatactatgccgaacatcaaatatgcataaccaaaaaatacatcaaatcctaaaatcttaaaacacat 300  Q
         || |||||||||||||||||||||| |||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  48367 tttttacggttttcttcatcttctctcttcttcatactatg-caaacttcaaatatgcagaaccaaaaaatacatcaaatcctaaaatctt-aaacacat 48270  T
Q  301 caacagacaataacaccttctttaaccctcatnnnnnnngtccatagaaatttatcaataataatcaacaacaaaatcatc 381  Q
    ||||       |||||||| |||||| |||||       ||||||||||||||||||||| ||||||||||||||||||||    
T  48269 caac-------aacaccttgtttaacactcataaaaaaagtccatagaaatttatcaatagtaatcaacaacaaaatcatc 48196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 47077 - 47193
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| ||||||||||||||  |||| |||||| | |  ||| | |||| ||||||||||||||| ||||||||||||  ||||||||||||||||    
T  47077 catttggtcccttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgtttactattttggt 47176  T
Q  101 catcttcgttaattttt 117  Q
    | ||| |||||||||||    
T  47177 cctctccgttaattttt 47193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 185; Significance: 1e-100; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 381
Target Start/End: Original strand, 27438797 - 27439166
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| ||||| |||||||| || ||| ||||||||||||||||||| || ||||||| ||||| |||||||| |||||||    
T  27438797 catttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataaatattctgccgtttactcttttggt 27438896  T
Q  101 catcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatcaacacttgannn 200  Q
    ||||| ||||||||||||||  ||||||| ||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||       
T  27438897 catctccgttaattttttaaaatatattattcttgatataattttaaccacttgattgcaggtctatagtatctaagagtgaaccatcaacacttga--t 27438994  T
Q  201 nnnnnacagttttcttcatcttctctcttcatcatactatgccgaacatcaaatatgcataaccaaaaaatacatcaaatcctaaaatcttaaaacacat 300  Q
         || |||||||||||||||||||||| |||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  27438995 tttttacggttttcttcatcttctctcttcttcatactatg-caaacttcaaatatgcagaaccaaaaaatacatcaaatcctaaaatctt-aaacacat 27439092  T
Q  301 caacagacaataacaccttctttaaccctcatnnnnnnngtccatagaaatttatcaataataatcaacaacaaaatcatc 381  Q
    ||||       |||||||| |||||| |||||       ||||||||||||||||||||| ||||||||||||||||||||    
T  27439093 caac-------aacaccttgtttaacactcataaaaaaagtccatagaaatttatcaatagtaatcaacaacaaaatcatc 27439166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 59 - 239
Target Start/End: Original strand, 13800096 - 13800272
Alignment:
Q  59 tcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattg 158  Q
    ||||||||||| ||||||||||    ||| |||| |||||||  | || |||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  13800096 tcaatttggtcccataaatctttctccgtatactgttttggttttttt-gttagttttttaatgtatattattcttgatatcattttaaccacttgattg 13800194  T
Q  159 caggtctatggtaactaagagtgaaccatcaacacttgannnnnnnnacagttttcttcatcttctctcttcatcatacta 239  Q
    ||||||||| |||  ||||||||||||||||||||||||        | ||||| ||||||||||||||||||||||||||    
T  13800195 caggtctatagtatttaagagtgaaccatcaacacttga---tttttatagtttacttcatcttctctcttcatcatacta 13800272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 22300002 - 22299895
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 110  Q
    |||||||||||||| | ||| | |||||| | |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||    
T  22300002 cttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcatctccgtt 22299903  T
Q  111 aatttttt 118  Q
    | ||||||    
T  22299902 attttttt 22299895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 9927617 - 9927728
Alignment:
Q  5 tggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatc 104  Q
    ||||| |||||||||||||| | ||||| |||||| | |||| |||||||||||||||||||||| |||||| ||||  |||||||||||||||||||||    
T  9927617 tggtcccttaacttattttttgtttttagtttggtcccctaactataaagtgtctcaatttggtcccataaa-cttcaatcgtttactattttggtcatc 9927715  T
Q  105 ttcgttaattttt 117  Q
    | |||||||||||    
T  9927716 tccgttaattttt 9927728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 8412424 - 8412315
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||| |||||||||||||| | ||| | ||| || | |||| |||||||||||||||||||||| |||||||||| || |||||||||||||||||    
T  8412424 atttggtcccttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatcttgtgccgtttactattttggtc 8412325  T
Q  102 atcttcgtta 111  Q
     ||| |||||    
T  8412324 ctctccgtta 8412315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 5311286 - 5311386
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | ||| | ||| || | |||| ||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  5311286 catttggtcccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtcctataaatcttatgtcgtttactattttggt 5311385  T
Q  101 c 101  Q
    |    
T  5311386 c 5311386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 27440284 - 27440168
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| ||||||||||||||  |||| |||||| | |  ||| | |||| ||||||||||||||| ||||||||||||  ||||||||||||||||    
T  27440284 catttggtcccttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgtttactattttggt 27440185  T
Q  101 catcttcgttaattttt 117  Q
    | ||| |||||||||||    
T  27440184 cctctccgttaattttt 27440168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 8411103 - 8411210
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 110  Q
    |||||||||||||| | ||| | ||| || | |||| ||||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||| ||||    
T  8411103 cttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtcttataaatcttatgccgtttactattttggtcctctccgtt 8411202  T
Q  111 aatttttt 118  Q
    ||| ||||    
T  8411203 aatatttt 8411210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 293707 - 293633
Alignment:
Q  43 ctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 117  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||| ||| |||| ||||||    
T  293707 ctaattataaagtgtttcaatttggtctcataagtcttctgtcgtttaccattttggtcctctccgtttattttt 293633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 19368625 - 19368540
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 88  Q
    ||||||| |||||||||||||  ||||| |||||||| |||||| |||||||||||||||||||||||| ||  ||||||||||||    
T  19368625 tttggtcccttaacttattttcggatttcattttggtcctctaactataaagtgtctcaatttggtctcttatgtcttctgtcgtt 19368540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 34084241 - 34084148
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattt 96  Q
    ||||||||| |||||||||||| | | ||| | |||||| ||  || |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34084241 catttggtcccttaacttatttctggttttcactttggtcct--aaatataaagtgtctcaatttggtctcataaatcttctgtcgtttaccattt 34084148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 31738372 - 31738486
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||| ||||||||||| ||||| |||||||  |||||| |||||||||     
T  31738372 tttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataagtcttctgcggtttaccattttggtcc 31738471  T
Q  103 tcttcgttaattttt 117  Q
    ||| ||||| |||||    
T  31738472 tctccgttagttttt 31738486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 33807697 - 33807818
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||| || |||||||||||||| | ||| | |||||| |  ||| ||||||||||||||||||| |  ||||||| ||||| |||||||  ||||||||    
T  33807697 atttgatcccttaacttatttttggttttcactttggtcccttaactataaagtgtctcaatttgatgccataaattttctgccgtttaccgttttggtc 33807796  T
Q  102 atcttcgttaattttttaatgt 123  Q
     ||| |||||||||||||||||    
T  33807797 ctctccgttaattttttaatgt 33807818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 13173046 - 13173114
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 71  Q
    ||||||| |||||||||||||  |||||||||||||| | |||| ||||||||||||||||||||||||    
T  13173046 tttggtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtctc 13173114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 31740379 - 31740259
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    |||||||  ||||||||||||| | ||| | |||||| |  ||| |||||||||||||||||||||| |||||||||| || ||||||| |||||||||     
T  31740379 tttggtcctttaacttattttttgttttcaatttggtcccttaactataaagtgtctcaatttggtcccataaatcttatgccgtttaccattttggtcc 31740280  T
Q  103 tcttcgttaattttttaatgt 123  Q
    | | ||||  |||||||||||    
T  31740279 tatccgtttgttttttaatgt 31740259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 33802126 - 33802010
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||||| |||||| || |||||||||||||| ||||||  | |||||    
T  33802126 catttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtcttaatttgatcccataaatcttctgtagtttaccgtattggt 33802027  T
Q  101 catcttcgttaattttt 117  Q
    | ||| ||||| |||||    
T  33802026 cctctccgttagttttt 33802010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 2138744 - 2138646
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||||| ||||| |||||||| |||||||||||||| | |||| |||||||||||||||||| ||| | ||  ||||||||||||  || ||||||||    
T  2138744 tttggtcccttaatttatttttggattttattttggtcccctaactataaagtgtctcaatttagtcccttatgtcttctgtcgttacctcttttggtc 2138646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 26581962 - 26582059
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||||| |||||||||||||| |||||||||||||| |  ||| ||||||||| |||||||||||| | || ||||| ||||| ||||| ||||||||    
T  26581962 tttggtcccttaacttatttttggattttattttggtcccttaactataaagtgactcaatttggtcccttatatcttttgtcg-ttactcttttggtc 26582059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 14328832 - 14328767
Alignment:
Q  52 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 117  Q
    |||||||| ||||||||||||||| |||| |||||||||||||||||||| ||| ||||| |||||    
T  14328832 aagtgtcttaatttggtctcataattcttttgtcgtttactattttggtcctctccgttacttttt 14328767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 14421842 - 14421777
Alignment:
Q  52 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 117  Q
    |||||||| ||||||||||||||| |||| |||||||||||||||||||| ||| ||||| |||||    
T  14421842 aagtgtcttaatttggtctcataattcttttgtcgtttactattttggtcctctccgttacttttt 14421777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 26584144 - 26584079
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggt 68  Q
    ||||||| |||||||||||||  |||||||||||||| | |||| |||||||||||||||||||||    
T  26584144 tttggtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggt 26584079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 34083075 - 34083163
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaa-tttggtctcataaatcttctgtcgtttactattttg 98  Q
    |||||||||||||||| ||| | ||||||   ||||||||||| |||||||| |||| |||||||||| ||| ||||||||||||||||    
T  34083075 cttaacttatttttagttttcactttggtctcctaattataaactgtctcaaatttgatctcataaattttcagtcgtttactattttg 34083163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 9928506 - 9928460
Alignment:
Q  208 agttttcttcatcttctctcttcatcatactatgccgaacatcaaat 254  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||    
T  9928506 agttttcttcatcttctctcttcatcatactatgcagaacttcaaat 9928460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 18773671 - 18773729
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    |||||||||||||| ||||| |||||||| | ||||||||||| |||||||||||||||    
T  18773671 cttaacttatttttggatttcattttggtcccctaattataaaatgtctcaatttggtc 18773729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 22298613 - 22298711
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||  ||||||||||||| | ||| |||||||| |||||||| |||||||||||| |||| || ||||| | ||||| ||||||  |||||||||    
T  22298613 tttggtcctttaacttatttttggttttcattttggtcctctaattttaaagtgtctcagtttgatcccataactattctgccgtttataattttggtc 22298711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 18139596 - 18139496
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||  | ||| | |||| | |||||| ||||||||||||||| |||||| | || |||||||| |||||| | |||||||    
T  18139596 catttggtcccttaacttattttccgttttcactttgatcctctaactataaagtgtctcaaattggtcccttatatcttctgccgtttattgttttggt 18139497  T
Q  101 c 101  Q
    |    
T  18139496 c 18139496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 8447238 - 8447296
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  8447238 cttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 8447296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 8456042 - 8456100
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  8456042 cttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 8456100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 28225433 - 28225499
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||   |||| |||||||| | |||| ||||||||||||||||||||||    
T  28225433 tttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtc 28225499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 19367734 - 19367792
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    |||||||||||||   |||| |||||||| | |||| ||||||||||||||||||||||    
T  19367734 cttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtc 19367792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 28226516 - 28226462
Alignment:
Q  12 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 66  Q
    ||||||||||||  ||||| |||||||| | |||| |||||||||||||||||||    
T  28226516 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttg 28226462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 13176441 - 13176340
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||| ||||| | |||||  ||||||||||| || | |||| |||||| ||||||||||||||||  ||  |||| |||||||  || ||||||||    
T  13176441 atttggtcccttaattcattttcggattttattttagtcccctaactataaaatgtctcaatttggtcttttatgtcttttgtcgttacctcttttggtc 13176342  T
Q  102 at 103  Q
    ||    
T  13176341 at 13176340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 14326215 - 14326260
Alignment:
Q  56 gtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||||||||| ||||| |||||| |||||||||||| |||||    
T  14326215 gtctcaatttggtcccataattcttctatcgtttactattgtggtc 14326260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 14419225 - 14419270
Alignment:
Q  56 gtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||||||||| ||||| |||||| |||||||||||| |||||    
T  14419225 gtctcaatttggtcccataattcttctatcgtttactattgtggtc 14419270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 9928445 - 9928394
Alignment:
Q  253 atatgcataaccaaaaaatacatcaaatcctaaaatcttaaaacacatcaaca 305  Q
    ||||||| ||||| |||| |||||||||||||||| ||| |||||||||||||    
T  9928445 atatgcagaaccagaaaacacatcaaatcctaaaagctt-aaacacatcaaca 9928394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 12203370 - 12203306
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    ||||||||||||||  |||| |||||||| || ||| | |||| ||||||||||||||| |||||    
T  12203370 cttaacttatttttgaatttcattttggtcctttaactttaaactgtctcaatttggtcccataa 12203306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 17916576 - 17916504
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    ||||||| ||||||||||||||  |||| |||||||| |  ||| | |||| ||||||||||||||| |||||    
T  17916576 tttggtcccttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtcacataa 17916504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 1e-47; HSPs: 83)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 44 - 233
Target Start/End: Complemental strand, 14171334 - 14171148
Alignment:
Q  44 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcatt 143  Q
    |||||||||| ||| ||||||||||| |||||||| |||||| |||||||||||| |||| | | ||||||||||||||||||||| ||||||||| |||    
T  14171334 taattataaaatgtttcaatttggtcccataaatcatctgtcatttactattttgatcatttcctttaattttttaatgtatattattcttgatattatt 14171235  T
Q  144 ttaaccacttgattgcaggtctatggtaactaagagtgaaccatcaacacttgannnnnnnnacagttttcttcatcttctctcttcatc 233  Q
    ||||||||||||||||||||||||  ||  ||||||||||||||| ||||||||        ||||||||||||||||||||||||||||    
T  14171234 ttaaccacttgattgcaggtctataatatataagagtgaaccatccacacttga---ttttaacagttttcttcatcttctctcttcatc 14171148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 26054916 - 26055070
Alignment:
Q  13 taacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaa 112  Q
    |||||||||||| ||||| |||||||| | |||| |||||||||| ||||||||||  |||||||||||||||||||||||||||||||  ||||||||     
T  26054916 taacttatttttggatttcattttggtcccctaactataaagtgtttcaatttggttccataaatcttctgtcgtttactattttggtctccttcgttag 26055015  T
Q  113 ttttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctat 167  Q
    |||||||||||  | || |  |||||| |||| ||||| | ||||||||||||||    
T  26055016 ttttttaatgtcaaatatttatgatataatttcaaccattagattgcaggtctat 26055070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 26056254 - 26056146
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||| ||||| |||||||| | |||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||     
T  26056254 tttggtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttttgtcgtttactattttggtcc 26056155  T
Q  103 tcttcgtta 111  Q
    ||| |||||    
T  26056154 tctccgtta 26056146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 3978051 - 3978162
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| ||||||||||||||  |||| |||||||| || ||| ||||||||||||||||||| || ||||| ||||||||||||||||||||||||    
T  3978051 catttggtcccttaacttatttttgaatttcattttggtcctttaactataaagtgtctcaatttgatcccataattcttctgtcgtttactattttggt 3978150  T
Q  101 catcttcgttaa 112  Q
    | ||| ||||||    
T  3978151 cctctccgttaa 3978162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 13641274 - 13641381
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 110  Q
    |||||||||||||| | ||| | |||||| | |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||    
T  13641274 cttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcatctccgtt 13641373  T
Q  111 aatttttt 118  Q
    | ||||||    
T  13641374 attttttt 13641381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 36511393 - 36511315
Alignment:
Q  48 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtata 126  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  36511393 tataaagtgtctcaatttggtcccataaatcttctgtcgtttactattttggtcatctccgttagttttctaatgtata 36511315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 49139808 - 49139930
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | |||  ||||||| |  ||| |||||||||||||||||||||||||||||||||| |  |||||||||||||||    
T  49139808 catttggtcccttaacttatttttggttttcgttttggtcccataactataaagtgtctcaatttggtctcataaatcttccgcagtttactattttggt 49139907  T
Q  101 catcttcgttaattttttaatgt 123  Q
     |||| ||||| |||||||||||    
T  49139908 aatctccgttagttttttaatgt 49139930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 3979421 - 3979312
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||| |||||||||||||| ||||| |||||||| |  ||| |||||||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  3979421 atttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttctgccgtttactattttggtc 3979322  T
Q  102 atcttcgtta 111  Q
     ||| |||||    
T  3979321 ctctccgtta 3979312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 52181413 - 52181297
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||||||  |||||||||||||   ||| | |||||| |||||| |||||||||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  52181413 atttggtcctttaacttattttttattttcaatttggtcctctaactataaagtgtctcaatttagtctcataaatcttatgttgtttactattttggtc 52181314  T
Q  102 atcttcgttaatttttt 118  Q
    |||| ||||||| ||||    
T  52181313 atctccgttaatatttt 52181297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 25787273 - 25787163
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | ||| | |||||| | |||| ||||||||||||||||||||||||||||||||| || | ||||||||||||||    
T  25787273 catttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtctcataaatcttatgccatttactattttggt 25787174  T
Q  101 catcttcgtta 111  Q
    | ||| |||||    
T  25787173 cctctccgtta 25787163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 47410992 - 47411101
Alignment:
Q  2 atttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    |||||||| ||||| |||||||| |||||| | |||| | | |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  47410992 atttggtcccttaaattattttt-gattttcaatttgatcccctaactataaagtgtctcaatttggtctcataaatcttatgtcgtttactattttggt 47411090  T
Q  101 catcttcgtta 111  Q
    ||||| |||||    
T  47411091 catctccgtta 47411101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 13930784 - 13930684
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | ||| | |||||| |||||| |||||||||||||||||||||| ||||| |||| |||||||||| ||||||||    
T  13930784 catttggtcccttaacttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttatgtcgtttaccattttggt 13930685  T
Q  101 c 101  Q
    |    
T  13930684 c 13930684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 14071312 - 14071212
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| ||||| |||||||| | ||| | |||||| |||||| |||||||||||||||||||||| ||||| ||||||||||||||| ||||||||    
T  14071312 catttggtcccttaatttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttctgtcgtttaccattttggt 14071213  T
Q  101 c 101  Q
    |    
T  14071212 c 14071212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 14390267 - 14390375
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| ||||||||||||||  |||| |||||||| |||||| |||||| ||||||||||||||  |||||||||||| |||||||| |||||||||     
T  14390267 tttggtcccttaacttattttttaatttcattttggtcctctaactataaaatgtctcaatttggttccataaatcttctttcgtttaccattttggtcc 14390366  T
Q  103 tcttcgtta 111  Q
    ||| |||||    
T  14390367 tctccgtta 14390375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 25785975 - 25786075
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||||||||||||||| |||||||||| ||||||||| |||||||||    
T  25785975 catttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttatgtcgtttattattttggt 25786074  T
Q  101 c 101  Q
    |    
T  25786075 c 25786075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 50679928 - 50679808
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||||| |||||||||||| |  ||| |||||||||||||||||||||| ||||| |||||   ||||||||| | |||||     
T  50679928 tttggtcccttaacttatttttagtttttattttggtcccttaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatatggtcc 50679829  T
Q  103 tcttcgttaattttttaatgt 123  Q
    ||| ||||| |||||||||||    
T  50679828 tctccgttagttttttaatgt 50679808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 16217457 - 16217557
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 110  Q
    |||||||||||||| | ||||| |||| |  ||||| ||||||||||||||||||||||  ||||||||| |||| ||||||||||||||||||| ||||    
T  16217457 cttaacttatttttggtttttaatttgatcatctaactataaagtgtctcaatttggtcctataaatcttatgtcatttactattttggtcatctccgtt 16217556  T
Q  111 a 111  Q
    |    
T  16217557 a 16217557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 21277002 - 21277098
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 98  Q
    |||||||| |||||||||||||| | ||| | |||||||  |||| |||||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  21277002 atttggtcccttaacttatttttggttttcaatttggttgcctaactataaagtatctcaatttggtcccataaatcttctgccgtttactattttg 21277098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 48467268 - 48467378
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | ||| | |||||||| |||| |||||||||| ||||||||||||| |||||||| ||||  ||||| |||||||    
T  48467268 catttggtcccttaacttattttttgttttcaatttggttccctaactataaagtgtttcaatttggtctcttaaatcttatgtc-attactgttttggt 48467366  T
Q  101 catcttcgttaa 112  Q
    ||||| ||||||    
T  48467367 catctccgttaa 48467378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 9592278 - 9592367
Alignment:
Q  34 tttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgt 123  Q
    |||||| | |||| |||||||||| |||||||| || |||||||||| ||||||||||||||||| |||| | |||||||||||||||||    
T  9592278 tttggtcccctaactataaagtgtttcaatttgatcccataaatcttttgtcgtttactattttgatcatttccgttaattttttaatgt 9592367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 42248401 - 42248304
Alignment:
Q  14 aacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 111  Q
    ||||||||||| ||||| |||||||| |  ||| ||||||||||||||||||||||  ||||||||| |||||||||| ||||| ||| |||||||||    
T  42248401 aacttatttttggatttcattttggtcccataactataaagtgtctcaatttggtcctataaatcttatgtcgtttaccattttagtcctcttcgtta 42248304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 47411557 - 47411460
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 98  Q
    ||||||||| |||||||||||||  | |||   |||||||| |||| |||||||||||||||||||||| |||||||||| || ||||||||||||||    
T  47411557 catttggtcccttaacttattttcggttttccatttggttccctaactataaagtgtctcaatttggtcccataaatcttatgccgtttactattttg 47411460  T

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Target: chr1; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 13568552 - 13568484
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 71  Q
    ||||||| ||||||||||||||||||||||||||| ||| ||| ||||||||||| |||||||||||||    
T  13568552 tttggtcccttaacttatttttagattttattttgattccctatttataaagtgtttcaatttggtctc 13568484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 20953297 - 20953405
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||  |||||||||  ||| ||||| ||||| |||     
T  20953297 tttggtcccttaacttatttttggatttcattttagttctataactataaagtgtctcaatttggtcctataaatcttaagtcatttaccattttagtcc 20953396  T
Q  103 tcttcgtta 111  Q
    ||| |||||    
T  20953397 tctccgtta 20953405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 19466281 - 19466198
Alignment:
Q  34 tttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 117  Q
    |||||| || ||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||| ||||| |||||    
T  19466281 tttggtcctttaactataaagtgtctcaatttggtcccataaatcttctgtcgtttactattgtggttctctccgttagttttt 19466198  T

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Target: chr1; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 47136785 - 47136686
Alignment:
Q  12 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 111  Q
    ||||||||||||| | ||| | || ||| | |||| ||||||||||||||||||||| ||||||||||| || ||||||||||||||||| ||| |||||    
T  47136785 ttaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggtgtcataaatcttatgccgtttactattttggtcctctccgtta 47136686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 52741495 - 52741614
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | |||||||||||| |||||| ||||||||||||||| ||| || | ||  ||||||||| |||| | |||||||    
T  52741495 catttggtcccttaacttatttttcgtttttattttggtcctctaactataaagtgtctcaaattgatcccttatgtcttctgtcatttattgttttggt 52741594  T
Q  101 catcttcgttaattttttaa 120  Q
    | ||| | ||| ||||||||    
T  52741595 cctctccattagttttttaa 52741614  T

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Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 34531672 - 34531770
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||||| |||||||||||||  ||||| |||||||| |||||| |||||| ||||||||||||||||| ||  ||||||||||||  || ||||||||    
T  34531672 tttggtcccttaacttattttcggatttcattttggtcctctaactataaaatgtctcaatttggtctcttatgtcttctgtcgttatctcttttggtc 34531770  T

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Target: chr1; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 16218545 - 16218477
Alignment:
Q  43 ctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 111  Q
    |||| |||||||| ||||||||||||| |||||||||| ||||||||| |||||||||||||| |||||    
T  16218545 ctaactataaagtatctcaatttggtcccataaatcttatgtcgtttaatattttggtcatctccgtta 16218477  T

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Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 51424260 - 51424328
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 71  Q
    ||||||| |||||||||||||| ||||| |||||||| |  ||||||||||||||||||||||||||||    
T  51424260 tttggtcccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttggtctc 51424328  T

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Target: chr1; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 13929302 - 13929465
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | ||| | |||||| |  ||| |||||||||||||||||||||| | ||||||||||  ||||||  || |||||    
T  13929302 catttggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggtcccgtaaatcttcttccgtttatcatcttggt 13929401  T
Q  101 catcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 164  Q
    | | | |||| |||||||||||| || || | |||||||  |||| |||| | ||| |||||||    
T  13929402 cctgtccgtttattttttaatgtctaatatttttgatattgttttgaccattcgatggcaggtc 13929465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 14169659 - 14169726
Alignment:
Q  34 tttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||| || ||| |||||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  14169659 tttggtcctttaactataaaatgtctcaatttggtcccataaatcttttgtcgtttactattttggtc 14169726  T

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Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 1061337 - 1061403
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| ||||||||||||| ||||||||||||||| | | || ||||||||||||||||||||||    
T  1061337 tttggtcgcttaacttattttcagattttattttggtccccaaactataaagtgtctcaatttggtc 1061403  T

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Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 33941326 - 33941392
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| ||||||||||||||  ||||||||||||| || |||||||||| |||||||||||||||    
T  33941326 tttggtcccttaacttatttttgaattttattttggtcctttaattataaaatgtctcaatttggtc 33941392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 47560146 - 47560271
Alignment:
Q  1 catttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttgg 99  Q
    ||||||||| |||| ||||||||  |||||| | |||||| | |||| |||||||||| |||||||| ||   ||||| ||||| |||||||| ||||||    
T  47560146 catttggtcccttaccttattttc-gattttcactttggtcccctaactataaagtgtttcaatttgatcctttaaatattctgccgtttactgttttgg 47560244  T
Q  100 tcatcttcgttaattttttaatgtata 126  Q
    |||||| |||||||||||| |||||||    
T  47560245 tcatctccgttaattttttgatgtata 47560271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 2236822 - 2236907
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 88  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| |||||||||||||||||||||| | ||  ||||||||||||    
T  2236822 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgtt 2236907  T

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Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 19464650 - 19464711
Alignment:
Q  44 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatct 105  Q
    |||||||||||||| ||||||||||  || |||||||||| |||||||||||||||||||||    
T  19464650 taattataaagtgtttcaatttggttccacaaatcttctgccgtttactattttggtcatct 19464711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 51726906 - 51726857
Alignment:
Q  48 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 97  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||    
T  51726906 tataaagtgtctcaatttggttccataaatcttctgtcgtttactatttt 51726857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 2238085 - 2237977
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||  ||||| |||||||| |  ||| |||||||||||||||||||||| | ||  ||||||||||||  || ||||||||     
T  2238085 tttggtcccttaacttattttcggatttcattttggtcccataactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcc 2237986  T
Q  103 tcttcgtta 111  Q
    ||| |||||    
T  2237985 tctccgtta 2237977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 9119813 - 9119877
Alignment:
Q  5 tggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||| |||||||||||||  ||||||| |||||| |||||| ||||||||||||||||||||||    
T  9119813 tggtcccttaacttattttcggattttaatttggtcctctaactataaagtgtctcaatttggtc 9119877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 35683064 - 35683172
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| |||||||||||||||||||||| | ||  ||||||| ||||  || ||||||||     
T  35683064 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcc 35683163  T
Q  103 tcttcgtta 111  Q
    ||| |||||    
T  35683164 tctccgtta 35683172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 48935209 - 48935109
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 110  Q
    |||||||||||||  ||||| |||||||| | |||| |||||||||||||||||||||| | ||  ||||||| ||||  || |||||||||||| ||||    
T  48935209 cttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcatctccgtt 48935110  T
Q  111 a 111  Q
    |    
T  48935109 a 48935109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 14312783 - 14312850
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    |||||||| |||||||||||||| ||||||||||||||   |||  ||||||||||||||||||||||    
T  14312783 atttggtcccttaacttatttttggattttattttggtctcctagctataaagtgtctcaatttggtc 14312850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 13642664 - 13642566
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||  ||||||||||||| | ||| |||||||| |||||||| |||||||||||| |||| || ||||| | ||||| ||||||  |||||||||    
T  13642664 tttggtcctttaacttatttttggttttcattttggtcctctaattttaaagtgtctcagtttgatcccataactattctgccgtttataattttggtc 13642566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 48974513 - 48974447
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||  ||||| |||||||||| |||| ||||||||||||||| ||||||    
T  48974513 tttggtcccttaacttattttcggatttcattttggttccctaactataaagtgtctcaacttggtc 48974447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 14764279 - 14764340
Alignment:
Q  44 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatct 105  Q
    ||||||| |||||| | ||||||||||||||| |||||||||||||||| |||| |||||||    
T  14764279 taattattaagtgtgttaatttggtctcataagtcttctgtcgtttactgttttagtcatct 14764340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 36509865 - 36509934
Alignment:
Q  48 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 117  Q
    |||||||||| ||||||||||  ||||||||||||| ||||||||||||||||  ||| ||||| |||||    
T  36509865 tataaagtgtttcaatttggttccataaatcttctgccgtttactattttggttctctccgttagttttt 36509934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 35684309 - 35684202
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    |||||||  ||||||||||||  |||||||||||||| | |||| |||||| ||||||||||||||| | ||  ||||||||||||  || ||||||||     
T  35684309 tttggtccattaacttattttcggattttattttggtcccctaactataaa-tgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcc 35684211  T
Q  103 tcttcgtta 111  Q
    ||| |||||    
T  35684210 tctccgtta 35684202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 40135436 - 40135372
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    |||||||||||||||||||| |||||||| |||||| | |||| ||||||||||| ||| |||||    
T  40135436 cttaacttatttttagatttcattttggtcctctaactttaaaatgtctcaattttgtcacataa 40135372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 47512191 - 47512119
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    ||||||||||||||||||||||  |||| |||||||| |  ||| | |||| |||||||||||||||||||||    
T  47512191 tttggtctcttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtctcataa 47512119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 1873953 - 1873898
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 66  Q
    ||||||||||||| | ||||||||||||| | |||| |||||||||||||||||||    
T  1873953 cttaacttattttcaaattttattttggtcccctaactataaagtgtctcaatttg 1873898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 1061559 - 1061493
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    |||| ||||||||||||||||| ||||| ||||| || | |||| |||||||||||| |||||||||    
T  1061559 tttgctctcttaacttatttttggatttcattttagtcccctaactataaagtgtcttaatttggtc 1061493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 1898013 - 1898079
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| ||||||||||||||  |||||| |||||||| |||| | |||| |||||||||||||||    
T  1898013 tttggtcccttaacttatttttgaattttaatttggttccctaactttaaattgtctcaatttggtc 1898079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 13567175 - 13567237
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 65  Q
    |||||||  ||||||||||||| ||||| |||||  ||| |||||||||||||||||||||||    
T  13567175 tttggtcctttaacttatttttggatttcattttaattccctaattataaagtgtctcaattt 13567237  T

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Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 34532809 - 34532743
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    |||||||  ||||||||||||   ||||||||||||| | |||| ||||||||||||||||||||||    
T  34532809 tttggtcctttaacttattttcgaattttattttggtcccctaactataaagtgtctcaatttggtc 34532743  T

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Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 48934258 - 48934316
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  48934258 cttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 48934316  T

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Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 9123506 - 9123442
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttgg 67  Q
    ||||||| |||||||||||||  |||||||||||||| |  ||| |||||||||| |||||||||    
T  9123506 tttggtcccttaacttattttcggattttattttggtcccttaactataaagtgtttcaatttgg 9123442  T

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Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 22167837 - 22167885
Alignment:
Q  52 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    |||||| ||||||||||| ||||||||||||| |||||| |||||||||    
T  22167837 aagtgtttcaatttggtcccataaatcttctgccgtttattattttggt 22167885  T

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Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 160
Target Start/End: Original strand, 24516392 - 24516500
Alignment:
Q  52 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccac 151  Q
    |||||| ||||||||||||||||| |||||   |||||| || | |||||  |   |||| ||||||||||||||  | ||||||||| ||||||||||     
T  24516392 aagtgtgtcaatttggtctcataagtcttcctccgtttattaatgtggtcccccctgttagttttttaatgtataaaattcttgatatgattttaaccat 24516491  T
Q  152 ttgattgca 160  Q
    |||||||||    
T  24516492 ttgattgca 24516500  T

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Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 32823467 - 32823539
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    ||||||| ||||||||||||||  ||||||||||||| |  ||| | |||| ||||||||||||||| |||||    
T  32823467 tttggtcccttaacttatttttgaattttattttggtcccttaactttaaactgtctcaatttggtcccataa 32823539  T

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Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 44340168 - 44340104
Alignment:
Q  5 tggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||| |||| ||||||||| ||||| |||||| | | ||||||||||||||||||| |||||||    
T  44340168 tggtcccttatcttatttttggatttcattttgatcccctaattataaagtgtctcattttggtc 44340104  T

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Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 2973116 - 2973049
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||| || |||||||||||||| | ||| ||||| || |  ||||||||||||||||||||||||||    
T  2973116 atttgatcccttaacttattttttgttttcattttagtcccttaattataaagtgtctcaatttggtc 2973049  T

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Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 9633783 - 9633862
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttc 81  Q
    ||||||||  ||||||||||||| | ||| |||||||| |  ||| |||||||||||||||||||||   ||||||||||    
T  9633783 atttggtcctttaacttatttttggttttcattttggtcccttaactataaagtgtctcaatttggttatataaatcttc 9633862  T

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Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 32823639 - 32823576
Alignment:
Q  12 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    |||||||||||||  ||||||||||||| | |||| | |||| ||||||||||||||| |||||    
T  32823639 ttaacttatttttgaattttattttggtcccctaactttaaactgtctcaatttggtcccataa 32823576  T

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Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 42244513 - 42244576
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 66  Q
    ||||||| |||||||||||||| ||||| ||||||||  | ||| |||||| ||||||||||||    
T  42244513 tttggtcccttaacttatttttggatttcattttggtcatataactataaaatgtctcaatttg 42244576  T

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Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 14429868 - 14429946
Alignment:
Q  108 gttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaacca 186  Q
    |||| ||||||||||| || || ||||||||| |||||||||  |||||||  |||||||| || |||| |||||||||    
T  14429868 gttatttttttaatgtctaatattcttgatatgattttaaccgtttgattgtgggtctatgatatctaacagtgaacca 14429946  T

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Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 189
Target Start/End: Complemental strand, 19194898 - 19194816
Alignment:
Q  107 cgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatca 189  Q
    |||||||||||||||||||| ||    |||| | |||||||||||||||||||||||  || ||| |||| |||| |||||||    
T  19194898 cgttaattttttaatgtataatatgtatgatgtgattttaaccacttgattgcaggttcattgtatctaatagtgcaccatca 19194816  T

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Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 40811256 - 40811318
Alignment:
Q  55 tgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 117  Q
    |||||||||||| || ||||| |||| || |||||| |||||||||||||| ||||| |||||    
T  40811256 tgtctcaatttgatcccataactcttttgccgtttattattttggtcatctccgttagttttt 40811318  T

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Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 2971715 - 2971780
Alignment:
Q  11 cttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    ||||||||||||||  ||||| | ||| || |||||| |||||||||||||||||||||| |||||    
T  2971715 cttaacttatttttttattttcactttagtcctctaactataaagtgtctcaatttggtcccataa 2971780  T

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Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 21278275 - 21278214
Alignment:
Q  53 agtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaatt 114  Q
    ||||| |||| |||||||||||| |||||| || ||||| ||||| ||||||| ||||||||    
T  21278275 agtgtttcaaattggtctcataactcttctatcatttaccattttagtcatctccgttaatt 21278214  T

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Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 33793786 - 33793847
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaa 62  Q
    |||||| || |||||||||||||| | ||| | |||||| | ||||||||||||||||||||    
T  33793786 catttgatcccttaacttatttttggttttcactttggtcccctaattataaagtgtctcaa 33793847  T

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Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 39193589 - 39193662
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    |||||||| ||||||||||||||  ||||||||||||| |  ||| | |||| |||||||||||| || |||||    
T  39193589 atttggtcccttaacttattttttaattttattttggtcccttaactttaaactgtctcaatttgatcccataa 39193662  T

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Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 48973215 - 48973292
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 88  Q
    |||||||||||||  ||||| ||||| || | |||| ||||||||||||||||||| || | ||  ||||||||||||    
T  48973215 cttaacttattttcggatttcattttagtcccctaactataaagtgtctcaatttgatcccttatgtcttctgtcgtt 48973292  T

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Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 51725397 - 51725470
Alignment:
Q  48 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaat 121  Q
    ||||||||||||||||||| ||  |||||  ||||| ||||||  ||||||||||| | |||| ||||||||||    
T  51725397 tataaagtgtctcaatttgatcctataaaatttctgccgtttatcattttggtcatgtccgtttattttttaat 51725470  T

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Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 20171269 - 20171197
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    |||||||  |||||||||||||  ||||||||||||| |  ||| | |||| ||||||||||||||| |||||    
T  20171269 tttggtcctttaacttatttttgaattttattttggtcccttaactttaaactgtctcaatttggtcccataa 20171197  T

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Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 27114692 - 27114764
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    ||||||| || |||||||||||  ||||||||||||| |  ||||| ||||  |||||||||||||| |||||    
T  27114692 tttggtccctcaacttatttttgaattttattttggtcccttaattttaaatcgtctcaatttggtcccataa 27114764  T

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Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 28309771 - 28309843
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    ||||||| ||||||||||||||  |||| |||||||| |  ||| | ||||  ||||||||||||||||||||    
T  28309771 tttggtcccttaacttattttttaatttcattttggtcccttaactttaaaccgtctcaatttggtctcataa 28309843  T

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Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 31859600 - 31859667
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 71  Q
    ||||||| |||||||||||||| ||||| ||||| | || |||| |||||||| ||| |||||||||||    
T  31859600 tttggtcacttaacttatttttggatttcatttt-gatccctaactataaagtatcttaatttggtctc 31859667  T

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Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 33850311 - 33850347
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggt 39  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  33850311 tttggtcccttaacttatttttggattttattttggt 33850347  T

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Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 33943667 - 33943631
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggt 39  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  33943667 tttggtcccttaacttatttttggattttattttggt 33943631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 160
Target Start/End: Complemental strand, 40110710 - 40110602
Alignment:
Q  52 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccac 151  Q
    |||||| ||||||||||| ||||| |||||    ||||| || | ||||| |||  |||| ||||||||||||||  | | ||||||| ||||||||||     
T  40110710 aagtgtgtcaatttggtcccataagtcttcctctgtttattaatgtggtcctctctgttagttttttaatgtataaaattattgatatgattttaaccat 40110611  T
Q  152 ttgattgca 160  Q
    |||||||||    
T  40110610 ttgattgca 40110602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 47511376 - 47511448
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    ||||||| ||||||||||||||  |||| |||||| | |  ||||| |||| ||||||||||||||| |||||    
T  47511376 tttggtcccttaacttatttttgaatttcattttgatcccttaattttaaactgtctcaatttggtcccataa 47511448  T

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Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 52743085 - 52742969
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||| |||||||||   ||| | |||||| | |||| ||||||||||||||| |||||| | ||  | || ||||||||||| || ||||    
T  52743085 catttggtcccttagcttatttttcattttcactttggtcccctaactataaagtgtctcaaattggtcccttaggttttatgtcgtttactgttatggt 52742986  T
Q  101 catcttcgttaattttt 117  Q
    | ||| ||||| |||||    
T  52742985 cctctccgttagttttt 52742969  T

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Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 36940142 - 36939951
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | ||| | |||| | | |||| |||||||||| |||||||||| |||||||||||||| ||||||||||||||||    
T  36940142 catttggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtttcaatttggtatcataaatcttctgccgtttactattttggt 36940043  T
Q  101 catcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatcaaca 192  Q
    ||||| ||||||||||||||| | || |||| |||||||  ||| ||||| | ||||||||||| || |||  ||| ||||||||| |||||    
T  36940042 catctccgttaattttttaatatctaataattttgatatggtttcaaccattcgattgcaggtccattgtatataatagtgaaccaccaaca 36939951  T

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Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 37274905 - 37275019
Alignment:
Q  12 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 111  Q
    ||||||||||||| ||||| |||||||| |||||| ||||||||||||||||||| || ||||||||||||| ||||||||||||||||| ||| |||||    
T  37274905 ttaacttatttttggatttcattttggtcctctaactataaagtgtctcaatttgttcccataaatcttctgccgtttactattttggtcctctccgtta 37275004  T
Q  112 attttttaatgtata 126  Q
     ||||||||||||||    
T  37275005 gttttttaatgtata 37275019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 36756071 - 36756187
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||||| ||||| |||||| |  ||| |||||||||| ||||| ||||| |||||||||| |||||||||||||||||||    
T  36756071 catttggtcccttaacttatttttagtttttaatttggtcccataactataaagtgtttcaatctggtcacataaatcttatgtcgtttactattttggt 36756170  T
Q  101 catcttcgttaattttt 117  Q
    ||||| ||||| |||||    
T  36756171 catctccgttagttttt 36756187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 38589828 - 38589936
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | ||| | |||||| |||||| ||||||||| |||||||||||| |||||||||| ||||||||||||||||| |    
T  38589828 catttggtcccttaacttattttt-gttttcaatttggtcctctaactataaagtggctcaatttggtcccataaatcttatgtcgtttactattttgat 38589926  T
Q  101 catcttcgtt 110  Q
    ||||||||||    
T  38589927 catcttcgtt 38589936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 24068339 - 24068459
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||| | ||| |||||||| | |||| |||||||||||||||||||||| ||||| |||||   ||||||||| |||||||     
T  24068339 tttggtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatttggtcc 24068438  T
Q  103 tcttcgttaattttttaatgt 123  Q
    ||| ||||| |||||||||||    
T  24068439 tctccgttagttttttaatgt 24068459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 31625483 - 31625383
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 110  Q
    |||||||||||||| | ||| | |||||| | ||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||| ||| ||||    
T  31625483 cttaacttatttttggttttcaatttggtcccctaattataaagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcctctccgtt 31625384  T
Q  111 a 111  Q
    |    
T  31625383 a 31625383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 37472421 - 37472510
Alignment:
Q  12 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||||||||||| | ||||| |||||| |||||| |||||||||||||||||||||| ||||| |||| |||||||||| |||||||||    
T  37472421 ttaacttatttttggtttttaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttttgtcgtttaccattttggtc 37472510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 38591116 - 38591016
Alignment:
Q  1 catttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttgg 99  Q
    ||||||||| |||||||||||||| |||||| | |||||| | |||| |||||||||||||||||||||| |||||||||| || |||||||||||||||    
T  38591116 catttggtcccttaacttattttt-gattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttatgccgtttactattttgg 38591018  T
Q  100 tc 101  Q
    ||    
T  38591017 tc 38591016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 43275757 - 43275857
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    |||||||||||||||||||||||| | ||| | |||||||| |||| |||||||||||||||||| ||| ||||| |||| || |||||| |||||||||    
T  43275757 catttggtctcttaacttattttttgttttcaatttggttccctaactataaagtgtctcaatttagtcccataactcttatgccgtttattattttggt 43275856  T
Q  101 c 101  Q
    |    
T  43275857 c 43275857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 14820203 - 14820294
Alignment:
Q  4 ttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatt 95  Q
    |||||| |||||||||||||| ||||||| |||||| | |||| |||||||||||||||||| ||| |||||||||| ||||||||| ||||    
T  14820203 ttggtcccttaacttatttttggattttaatttggtcccctaactataaagtgtctcaatttagtcccataaatcttatgtcgtttattatt 14820294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 35943916 - 35944031
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaag-tgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||||| |||||||||||||| | ||| |||||||| |  ||||||||||  ||||||||||||||| |||||||||| ||  ||||||||||||||||    
T  35943916 tttggtcccttaacttatttttggttttcattttggtcccttaattataaaaatgtctcaatttggtcccataaatcttatgcagtttactattttggtc 35944015  T
Q  102 atcttcgttaattttt 117  Q
    |||| ||||| |||||    
T  35944016 atctccgttagttttt 35944031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 117065 - 117171
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 110  Q
    |||||||||||||| | ||| |||||||| | ||||||||||| ||| |||||||| || |||||||||||||||||||| | |||||||| ||| ||||    
T  117065 cttaacttatttttggttttcattttggtcccctaattataaaatgtttcaatttgatcccataaatcttctgtcgtttattgttttggtcctctccgtt 117164  T
Q  111 aattttt 117  Q
    | |||||    
T  117165 agttttt 117171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 29739752 - 29739630
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||||||||| |||||||| | ||| | |||| | | |||| |||||||||||||||||||||| ||||||| ||||  ||||||| ||||||||    
T  29739752 catttggtctcttaatttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccataaattttcttccgtttaccattttggt 29739653  T
Q  101 catcttcgttaattttttaatgt 123  Q
    ||| | ||||  |||||||||||    
T  29739652 catgtccgtttgttttttaatgt 29739630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 31623913 - 31624023
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||| ||||||||||| |||||||||| ||||||||| |||||| ||    
T  31623913 catttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataaatcttatgtcgtttattattttagt 31624012  T
Q  101 catcttcgtta 111  Q
    | ||| |||||    
T  31624013 cctctccgtta 31624023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 16363920 - 16363811
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||| |||||||||||||| | ||| | |||||| |||||| |||||||| |||||||||| || |||||||| ||||  ||||||||||||||||    
T  16363920 atttggtcccttaacttatttttggttttcactttggtcctctaactataaagtatctcaatttgatcccataaatcgtctgctgtttactattttggtc 16363821  T
Q  102 atcttcgtta 111  Q
     ||| |||||    
T  16363820 ctctccgtta 16363811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 20308663 - 20308728
Alignment:
Q  52 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 117  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| | | |||||||||    
T  20308663 aagtgtctcaatttggtctcataactcttctgtcgtttactattttggtcatttccattaattttt 20308728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 21095296 - 21095361
Alignment:
Q  52 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 117  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| | | |||||||||    
T  21095296 aagtgtctcaatttggtctcataactcttctgtcgtttactattttggtcatttccattaattttt 21095361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 36070185 - 36070285
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    |||||| || ||||| |||||||| | ||| | |||||| | |||| ||||||||||||||||||| || ||||||||||||| ||||||||||||||||    
T  36070185 catttgatcccttaatttatttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatcttctgccgtttactattttggt 36070284  T
Q  101 c 101  Q
    |    
T  36070285 c 36070285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 45385901 - 45385793
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||| ||||| |||||||| |  |||||||||||||| |||||||| ||  ||||||||| |||||||||| ||||| |||     
T  45385901 tttggtcccttaacttatttttggatttcattttggtcccataattataaagtgtttcaatttgatcctataaatcttatgtcgtttaccattttagtcc 45385802  T
Q  103 tcttcgtta 111  Q
    ||| |||||    
T  45385801 tctccgtta 45385793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 6843772 - 6843878
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgt-tta-ctattttggtcatcttcg 108  Q
    |||||||||||||  |||||||||||||| | |||| |||||||||||||||||||||| | || |||||||||||| ||| || |||||||||||| |     
T  6843772 cttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtcccctatatcttctgtcgtgttacctcttttggtcatctcca 6843871  T
Q  109 ttaattt 115  Q
    |||||||    
T  6843872 ttaattt 6843878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 7796906 - 7796809
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgt 109  Q
    ||||||||||||||   |||||||||| |  |||||||||||||||||||||||||||||||||| ||||||| || |||  ||||||||||| |||||    
T  7796906 cttaacttattttttatttttattttgatcatctaattataaagtgtctcaatttggtctcataactcttctgccg-ttatcattttggtcattttcgt 7796809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 19913501 - 19913615
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| ||||||||||||||  |||| | |||||| |||||| |||||||||| ||||||||||| ||||| |||||||  |||||  |||||||||     
T  19913501 tttggtcccttaacttatttttgaatttcaatttggtcctctaactataaagtgtttcaatttggtcccataagtcttctgcggtttatcattttggtcc 19913600  T
Q  103 tcttcgttaattttt 117  Q
    ||| ||||| |||||    
T  19913601 tctccgttagttttt 19913615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 24069553 - 24069455
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||||| |||||||||||||| | ||| |||||| | |  ||| |||||||||||||||||||||| ||||| ||||||| ||||||| |||||||||    
T  24069553 tttggtcccttaacttatttttggttttcattttgatcccttaactataaagtgtctcaatttggtcccataactcttctgccgtttaccattttggtc 24069455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 43278030 - 43277928
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    |||||| || ||||||||||||||   ||||| |||||| | |||| |||||| ||||||||||||||| | |||||||| || ||||||||||||||||    
T  43278030 catttgatcccttaacttattttttatttttaatttggtcccctaactataaaatgtctcaatttggtcccgtaaatcttatgccgtttactattttggt 43277931  T
Q  101 cat 103  Q
    |||    
T  43277930 cat 43277928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 4810232 - 4810129
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||| ||| |||||||||||||| | ||||| |||||| || |||||||||| |||||||||||  |  |||||||||| |||| ||||||||||||||    
T  4810232 catttcgtcccttaacttatttttggtttttaatttggtcct-taattataaaatgtctcaatttaattccataaatcttatgtcatttactattttggt 4810134  T
Q  101 catct 105  Q
    |||||    
T  4810133 catct 4810129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 34616183 - 34616307
Alignment:
Q  48 tataaagtgtctcaatttggtctcataaatcttct-----gtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcat 142  Q
    |||||||||||||||||||||| |||||||||| |     ||||||||| ||||||||||| | ||||| ||||||||||| || || | || |||| ||    
T  34616183 tataaagtgtctcaatttggtcccataaatcttttcttttgtcgtttaccattttggtcatttccgttagttttttaatgtttaatatttttaatatgat 34616282  T
Q  143 tttaaccacttgattgcaggtctat 167  Q
    || ||||| | ||||||||||||||    
T  34616283 ttcaaccattcgattgcaggtctat 34616307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 37994 - 38108
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||| | ||| ||||| || | |||| |||||||||| | ||||||||||||||| |||||   ||||||||||| |||||     
T  37994 tttggtcccttaacttattttttgttttaattttagtcccctaactataaagtgtttgaatttggtctcataagtcttcctccgtttactattgtggtcc 38093  T
Q  103 tcttcgttaattttt 117  Q
    ||| ||||| |||||    
T  38094 tctccgttagttttt 38108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 7816187 - 7816090
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgt 109  Q
    ||||||||||||||   |||||||||| |  ||||| |||||||||||||||||||||||||||| ||||||| || |||  ||||||||||| |||||    
T  7816187 cttaacttattttttatttttattttgatcatctaactataaagtgtctcaatttggtctcataattcttctgccg-ttatcattttggtcattttcgt 7816090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 35945545 - 35945383
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||| |||||||||||||| | ||| ||||| || |  ||| |||||| ||||||| ||||||| |||| ||||||||  ||||||||||||||||    
T  35945545 atttggtcccttaacttattttttgttttcattttagtcccttaactataaaatgtctcactttggtcccatatatcttctgcagtttactattttggtc 35945446  T
Q  102 atcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 164  Q
      ||   ||| ||||||||||| || || | ||||| | |||| ||||| | |||||||||||    
T  35945445 ccctggattagttttttaatgtttaatatttttgatgtgatttcaaccattcgattgcaggtc 35945383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 37324787 - 37324681
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 110  Q
    |||||||||||||| | ||||| |||||| | |||| |||||| |||||||||||||||||| ||||||||   | |||||||||||| |  ||| ||||    
T  37324787 cttaacttatttttggtttttaatttggtcccctaactataaaatgtctcaatttggtctcaaaaatcttcgaccatttactattttgtttctctccgtt 37324688  T
Q  111 aattttt 117  Q
    |||||||    
T  37324687 aattttt 37324681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 39546776 - 39546670
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 110  Q
    |||||||||||||  | ||| | |||||||| |||| | |||||||||||||||||||| ||||||| || || |||||||  |||||||||||| ||||    
T  39546776 cttaacttattttctgttttcactttggttccctaactttaaagtgtctcaatttggtcccataaatattatgccgtttaccgttttggtcatctccgtt 39546677  T
Q  111 aattttt 117  Q
    | |||||    
T  39546676 agttttt 39546670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 41868025 - 41867915
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| ||||| |||||||||| ||| | |||||| | |||| |||||||||||||||||||||| ||||||| || || |||||  |||||| ||    
T  41868025 catttggtcccttaatttatttttagttttcactttggtcccctaactataaagtgtctcaatttggtcccataaattttatgccgttttttattttagt 41867926  T
Q  101 catcttcgtta 111  Q
    | ||| |||||    
T  41867925 cctctccgtta 41867915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 13367112 - 13367043
Alignment:
Q  48 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 117  Q
    |||||||||| | ||||||||| ||||||||||||| ||||||||||||||||| ||| ||||| |||||    
T  13367112 tataaagtgttttaatttggtcccataaatcttctgccgtttactattttggtcctctccgttagttttt 13367043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 19915013 - 19914852
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    |||||||  ||||||||||||  | ||| | |||||| |  ||| |||||||||||||||||||  | ||||||||||||  ||||||| ||||||||||    
T  19915013 tttggtcctttaacttattttgggttttcaatttggtcccttaactataaagtgtctcaatttgtacccataaatcttctaccgtttaccattttggtca 19914914  T
Q  103 tcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 164  Q
    | | ||||  ||| ||||||| || || | ||||||| ||| | |||| |||||||||||||    
T  19914913 tatccgtttgtttattaatgtctaatatttttgatattattgtgaccatttgattgcaggtc 19914852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 3237427 - 3237526
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||| ||||| |||| ||| | |||| | |||| ||||||||||||||| ||||||| ||||| ||||||| |||||| |||    
T  3237427 tttggtcccttaacttatttttggatttcattt-ggtcccctaactttaaactgtctcaatttggtcccataaatattctgccgtttacaattttgatca 3237525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 39515208 - 39515308
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||| | ||| |||||| | | || | |||||||||||||||||||||||||||| |||| || | |||||  |||||||||    
T  39515208 tttggtcccttaacttatttttggttttcattttgatcccctgactataaagtgtctcaatttggtctcataactcttttgccatttacctttttggtca 39515307  T
Q  103 t 103  Q
    |    
T  39515308 t 39515308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 1570268 - 1570205
Alignment:
Q  48 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 111  Q
    |||||||||||||||||||||||  ||||| || || ||||||||||||||||||||| |||||    
T  1570268 tataaagtgtctcaatttggtctattaaattttatgccgtttactattttggtcatctccgtta 1570205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 27750687 - 27750620
Alignment:
Q  44 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 111  Q
    |||||||||||| ||||||||||||| |||||||||| | | |||||||||||||||| ||| |||||    
T  27750687 taattataaagtatctcaatttggtcccataaatcttatattgtttactattttggtcttctccgtta 27750620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 6844680 - 6844614
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||  ||||| |||||||||| ||||  |||||||||||||||||||||    
T  6844680 tttggtcccttaacttattttcggatttcattttggttccctaacaataaagtgtctcaatttggtc 6844614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 21267173 - 21267239
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||| | ||| | |||||| |||||| ||||||||||||||||||||||    
T  21267173 tttggtcgcttaacttatttttggttttcactttggtcctctaactataaagtgtctcaatttggtc 21267239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 36938750 - 36938804
Alignment:
Q  63 tttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 117  Q
    ||||||||||||||||||||| ||||||||||||||||| |||  ||||||||||    
T  36938750 tttggtctcataaatcttctgccgtttactattttggtcttctctgttaattttt 36938804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 37323355 - 37323447
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactat 94  Q
    ||||||||| ||||| |||||||| | ||| | |||||||| |||| |||||| |||||||||||| || ||||||||||| | ||||||||||    
T  37323355 catttggtcccttaatttatttttggttttcaatttggttccctaactataaaatgtctcaatttgatcccataaatcttc-ggcgtttactat 37323447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 29738300 - 29738407
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| ||||||||||||||   ||| | ||||||    ||| |||||||||||||||||| ||||||||| ||||||| |||||||  ||||||||     
T  29738300 tttggtcccttaacttattttttattttcaatttggtctattaactataaagtgtctcaatttagtctcataagtcttctgccgtttacctttttggtcc 29738399  T
Q  103 tcttcgtt 110  Q
    ||| ||||    
T  29738400 tctccgtt 29738407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 2421351 - 2421286
Alignment:
Q  52 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 117  Q
    |||||| ||||||||||| || |||||||||| |||||| |||||||||| |||| |||| |||||    
T  2421351 aagtgtttcaatttggtcccagaaatcttctgccgtttattattttggtcctctttgttagttttt 2421286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 7486131 - 7486200
Alignment:
Q  48 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 117  Q
    |||||||||  ||||||||||| |||||||||| ||  |||||||||||||||| ||| ||||| |||||    
T  7486131 tataaagtgcttcaatttggtcccataaatcttttgctgtttactattttggtcctctccgttagttttt 7486200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 8095404 - 8095453
Alignment:
Q  52 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||||||||||||| ||| | |||| ||||||||||||||||||||    
T  8095404 aagtgtctcaatttggtcccattactcttttgtcgtttactattttggtc 8095453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 37276305 - 37276252
Alignment:
Q  48 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||||||||||||||||| |||||||||| || |||||| ||| ||||||    
T  37276305 tataaagtgtctcaatttggtcccataaatcttttgccgtttattatattggtc 37276252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 41866901 - 41867005
Alignment:
Q  1 catttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttgg 99  Q
    ||||||||| |||||||||||||| |||||| | |||| | |  ||| |||||||||| ||||||||||| ||||||| ||  | | |||||||||||||    
T  41866901 catttggtcccttaacttattttt-gattttcactttgatcccttaactataaagtgtttcaatttggtcccataaattttacgccatttactattttgg 41866999  T
Q  100 tcatct 105  Q
    ||||||    
T  41867000 tcatct 41867005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 43386807 - 43386730
Alignment:
Q  5 tggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttct 82  Q
    ||||| |||||||||||||| | ||| | |||||| | |||| |||||| ||||||||||||||| ||||| ||||||    
T  43386807 tggtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcccataactcttct 43386730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 31844518 - 31844566
Alignment:
Q  141 attttaaccacttgattgcaggtctatggtaactaagagtgaaccatca 189  Q
    |||||||||||||||||||| |||||| |||| ||| ||||||||||||    
T  31844518 attttaaccacttgattgcatgtctattgtaattaacagtgaaccatca 31844566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 189
Target Start/End: Original strand, 2075488 - 2075570
Alignment:
Q  107 cgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatca 189  Q
    |||||||||||||||||||| ||    |||| | |||||||||||||||||||||||  || ||| |||| |||| |||||||    
T  2075488 cgttaattttttaatgtataatatgtatgatgtgattttaaccacttgattgcaggttcattgtatctaatagtgcaccatca 2075570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 7770996 - 7770899
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgt 109  Q
    ||||||||||||||   ||| |||||| |  ||||| |||||||||| ||||||||||||||||| |||| || || |||  ||||||||||| |||||    
T  7770996 cttaacttattttttattttcattttgatcatctaactataaagtgtttcaatttggtctcataactcttatgccg-ttatcattttggtcattttcgt 7770899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 7815060 - 7815117
Alignment:
Q  11 cttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggt 68  Q
    ||||| |||||||| |||||| |||||||| ||||||||||||| ||||||||||||||    
T  7815060 cttaaattattttt-gattttcattttggtcctctaattataaaatgtctcaatttggt 7815117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8395031 - 8395069
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggt 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  8395031 catttggtctcttaacttatttttggtttttattttggt 8395069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 10053853 - 10053691
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||| ||| |||||||||||||| | ||| | |||||| |  ||| ||||||||||||||| |||||| | ||  |||| |||||||  || |||||||    
T  10053853 catttagtcccttaacttatttttggttttcactttggtcccttaactataaagtgtctcaagttggtcccttatgtcttatgtcgttacctcttttggt 10053754  T
Q  101 catcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggt 163  Q
      ||| |||||||||||| |  |||| || | || |||| ||| |||||  ||||||||||||    
T  10053753 tctctccgttaatttttttaattataatatttttaatatgattataaccgtttgattgcaggt 10053691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 13360362 - 13360428
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||||||||| ||||| || | ||||||| |||  ||||||| ||||||    
T  13360362 tttggtcccttaacttatttttagatttcattttcgtcccctaattaaaaaacgtctcaaattggtc 13360428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 29441625 - 29441687
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 65  Q
    ||||||||||||||||||||||  ||||||||||||| |  ||| | |||| |||||||||||    
T  29441625 tttggtctcttaacttatttttgaattttattttggtcccttaactttaaactgtctcaattt 29441687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 36757310 - 36757260
Alignment:
Q  30 ttattttggttctctaattataaagtgtctcaatttggtctcataaatctt 80  Q
    |||||||||| | |||| ||||||  |||||||||||||||||||||||||    
T  36757310 ttattttggtcccctaactataaaacgtctcaatttggtctcataaatctt 36757260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 45194500 - 45194606
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 110  Q
    ||||| ||||||| |  ||||| |||||| || ||| ||| |||||| | ||||| || | ||||||||| || |||||||||||||| |||||| | ||    
T  45194500 cttaatttattttaattttttagtttggtcctttaactattaagtgttttaatttagtgttataaatcttttgccgtttactattttgatcatctccatt 45194599  T
Q  111 aattttt 117  Q
    |||||||    
T  45194600 aattttt 45194606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 3612690 - 3612618
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggt-tctctaattataaagtgtctcaatttggtctcataa 75  Q
    ||||||| ||||||||||||||  ||||||||||||| ||| ||| | |||| ||||||||||||||| |||||    
T  3612690 tttggtcccttaacttatttttgaattttattttggtctct-taactttaaattgtctcaatttggtcccataa 3612618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 4675760 - 4675833
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    |||||||  ||||||||||||||  ||||||||||||| |  ||| | |||| ||||||||||||||| |||||    
T  4675760 atttggttccttaacttatttttgaattttattttggtcccttaactttaaattgtctcaatttggtcccataa 4675833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 10052111 - 10052179
Alignment:
Q  1 catttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||||| ||||||||||| || |||||| | |||||| | |||||||||||||||||||| ||||||    
T  10052111 catttggtcccttaacttattctt-gattttcactttggtcccctaattataaagtgtctcaaattggtc 10052179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 193
Target Start/End: Original strand, 42793816 - 42793901
Alignment:
Q  108 gttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatcaacac 193  Q
    |||||||||||||||| ||  | | ||||||| |||||||||| | ||||||| ||| || |||| ||| ||||||||||| ||||    
T  42793816 gttaattttttaatgtctaaaacttttgatatgattttaaccattggattgcatgtccattgtaattaatagtgaaccatcgacac 42793901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 157
Target Start/End: Complemental strand, 45195866 - 45195757
Alignment:
Q  48 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaa 147  Q
    |||||||||||||||||| |||   || |||||||| ||||  ||||||||||||||   ||||||||||| |||| || || | || |||| ||| |||    
T  45195866 tataaagtgtctcaatttagtccattatatcttctgccgttatctattttggtcatcacagttaattttttgatgtttaatatttttaatataattataa 45195767  T
Q  148 ccacttgatt 157  Q
    || |||||||    
T  45195766 ccgcttgatt 45195757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 4807384 - 4807472
Alignment:
Q  12 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    |||||||||||||   ||||| |||||| | |||| ||||| || | ||||||||||| ||||||||||  | |||||| |||||||||    
T  4807384 ttaacttatttttgatttttaatttggtcccctaactataacgtttttcaatttggtcccataaatcttacgccgtttattattttggt 4807472  T

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Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 15989013 - 15989085
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    ||||||| ||||||||||||||| |||| |||||||| |  ||| | ||||  |||||||||||||| |||||    
T  15989013 tttggtcccttaacttatttttaaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 15989085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 101
Target Start/End: Original strand, 31871462 - 31871502
Alignment:
Q  61 aatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||||||| ||| |||||||||||||||| ||||||||||    
T  31871462 aatttggtcccatgaatcttctgtcgtttattattttggtc 31871502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 8e-34; HSPs: 92)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 33376225 - 33376342
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    |||||||||||||||||||||||| | ||| | ||| || | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  33376225 catttggtctcttaacttatttttggttttcaatttagtgccctaattataaagtgtctcaatttggtcccataaatcttctgtcgtttactattttagt 33376324  T
Q  101 catcttcgttaatttttt 118  Q
    | ||| ||||||||||||    
T  33376325 cctctccgttaatttttt 33376342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 31711099 - 31711258
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| ||||| |||||||| || ||| |||||||||||||||||||||||||||| |||| |||||||||| |||||| |    
T  31711099 catttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttggtctcataagtcttatgtcgtttaccattttgat 31711198  T
Q  101 catcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgca 160  Q
    | | | ||||  ||||||||||| || || | |||||||  ||| ||||| | |||||||    
T  31711199 cctttccgtttgttttttaatgtttactatttttgatattgtttcaaccattcgattgca 31711258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 15446777 - 15446663
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||| ||||| ||||||||  |||||||||||||||| ||||||||||| ||||||| ||||  |||||||||||||||||     
T  15446777 tttggtcccttaacttatttttggatttcattttggtcatctaattataaagtgtttcaatttggtcccataaattttctaccgtttactattttggtcc 15446678  T
Q  103 tcttcgttaattttt 117  Q
    ||| ||||| |||||    
T  15446677 tctccgttagttttt 15446663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 185
Target Start/End: Complemental strand, 46796133 - 46795951
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||| | ||| |||||||| | |||| |||||||||||||||||||||| ||||| |||||   ||||||||||| |||||     
T  46796133 tttggtcccttaacttatttttggttttaattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactattgtggtcc 46796034  T
Q  103 tcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaacc 185  Q
    ||| ||||| ||||||||||| ||    | ||||||| |||||||||| ||||||||| ||| || |||  ||| ||||||||    
T  46796033 tctccgttagttttttaatgtctaaattttttgatatgattttaaccatttgattgcatgtccattgtatttaatagtgaacc 46795951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 33377473 - 33377363
Alignment:
Q  1 catttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttgg 99  Q
    ||||||||| |||||||||||||| |||||| | |||||| | |||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  33377473 catttggtcccttaacttattttt-gattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttgg 33377375  T
Q  100 tcatcttcgtta 111  Q
    || ||| |||||    
T  33377374 tcctctccgtta 33377363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 3 - 185
Target Start/End: Original strand, 47667188 - 47667369
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    |||||||  ||||||||||||| | |||||||||||| |||||| |||||||||||||||||||||||||||| |||||   ||||||||| | |||||     
T  47667188 tttggtcctttaacttatttttggtttttattttggt-ctctaactataaagtgtctcaatttggtctcataagtcttcctccgtttactaatatggtcc 47667286  T
Q  103 tcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaacc 185  Q
    ||| ||||| ||||||||||| ||    | || || | |||||||||| ||||||||| ||| || ||| |||| ||||||||    
T  47667287 tctgcgttagttttttaatgtctaaatttttttatgtgattttaaccatttgattgcatgtccattgtatctaatagtgaacc 47667369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 11115089 - 11114973
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| ||||||||||||| || ||| |||||||| | |||| |||||||| ||||||||||||| ||||| ||||||||||||||| |||||||     
T  11115089 catttggtcccttaacttattttcagttttcattttggtcccctaactataaagtatctcaatttggtcccataactcttctgtcgtttaccattttgga 11114990  T
Q  101 catcttcgttaattttt 117  Q
    | ||| ||||| |||||    
T  11114989 cctctccgttagttttt 11114973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 21104419 - 21104256
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||  ||||| |||||||| | ||| |||||||| | |||| |||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  21104419 catttggttccttaaattattttttgttttcattttggtcccctaactataaagtgtctcaatttggtctcatatgtcttctgtcgtttaccattttggt 21104320  T
Q  101 catcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 164  Q
    | | | ||||   |||||||||| || || | |||||||  ||| ||||| | |||||||||||    
T  21104319 cctttccgtttgctttttaatgtttactatttttgatattgtttcaaccattcgattgcaggtc 21104256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 28103595 - 28103436
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| ||||| |||||||| |  ||| |||||||||||||||||||||| |||||  |||||| ||||||| ||||||||    
T  28103595 catttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataagacttctgccgtttaccattttggt 28103496  T
Q  101 catcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgca 160  Q
    | | | ||||  ||||||||||| || || | |||||||  ||| ||||| | |||||||    
T  28103495 cctttccgtttgttttttaatgtttactatttttgatattgtttcaaccattcgattgca 28103436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 35787804 - 35787919
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||||| |||||||||||| | ||| | |||||| |||||| |||||| ||| ||||||||||| |||||||||||||||||||||  ||||||||    
T  35787804 atttggtctcataacttatttttggttttcactttggtcctctaactataaaatgtttcaatttggtcccataaatcttctgtcgtttaccgttttggtc 35787903  T
Q  102 atcttcgttaattttt 117  Q
     ||| ||||| |||||    
T  35787904 ctctccgttagttttt 35787919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 1273541 - 1273432
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | ||||| |||||| | |||| |||||||||||||||||||||| ||||| |||| |||||||| ||||||||||    
T  1273541 catttggtcccttaacttatttttgg-ttttaatttggtcccctaactataaagtgtctcaatttggtcccataagtcttatgtcgtttgctattttggt 1273443  T
Q  101 catcttcgtta 111  Q
    | ||| |||||    
T  1273442 cctctccgtta 1273432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 38370291 - 38370405
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| ||||||||||||||   ||| | ||||||  |||||  ||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||    
T  38370291 tttggtcccttaacttatttttcattttcaatttggtcatctaacgataaagtgtatcaatttggtctcataactcttctgtcgtttaccattttggtca 38370390  T
Q  103 tcttcgttaattttt 117  Q
    ||| ||||| |||||    
T  38370391 tctccgttagttttt 38370405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 38553936 - 38554130
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| ||||| |||||||  | ||||||||||||  ||||| |||||||||||||||||||||||||||| |||||   ||||||||| | | ||    
T  38553936 catttggtcccttaatttattttctgtttttattttggtcttctaactataaagtgtctcaatttggtctcataagtcttcctccgtttactaatgtagt 38554035  T
Q  101 catcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatcaacactt 195  Q
    ||||| | ||| ||||||||||| ||    | ||||||| |||||||||| ||||| ||| ||| || |||  ||| |||||||| ||| |||||    
T  38554036 catctccattagttttttaatgtctaaattttttgatatgattttaaccatttgatcgcacgtccattgtatttaatagtgaaccgtcatcactt 38554130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 26393235 - 26393138
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttgg 99  Q
    |||||||| ||||||||||||||   |||||||||| | || ||| |||||||||||||||||||||| ||||| ||||||||||||||| |||||||    
T  26393235 atttggtcccttaacttattttttatttttattttgatcctttaactataaagtgtctcaatttggtcccataactcttctgtcgtttaccattttgg 26393138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 27408770 - 27408871
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| ||||||||||||| || ||| | ||||||  ||||| |||||||||||||||||||||| ||||||||||||  ||||||| ||||||||    
T  27408770 catttggtcccttaacttattttcagttttcaatttggtcatctaactataaagtgtctcaatttggtcccataaatcttcttccgtttaccattttggt 27408869  T
Q  101 ca 102  Q
    ||    
T  27408870 ca 27408871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 40146732 - 40146615
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||| ||||||| | |||||||||||| || ||| |||||||||||||||||||||| ||||| ||||||  || |||||| | ||||    
T  40146732 catttggtcccttaacgtatttttggtttttattttggtcctttaactataaagtgtctcaatttggtcccataagtcttcttccgattactaatgtggt 40146633  T
Q  101 catcttcgttaatttttt 118  Q
    ||||| ||||| ||||||    
T  40146632 catctccgttagtttttt 40146615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 44305077 - 44304968
Alignment:
Q  12 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 111  Q
    ||||||||||||| | ||| | |||||| | |||| || |||||||||||||||||||  |||||||||| |  |||||||||||||||||||| |||||    
T  44305077 ttaacttattttttgttttcaatttggtcccctaactacaaagtgtctcaatttggtcctataaatcttccgctgtttactattttggtcatctccgtta 44304978  T
Q  112 attttttaat 121  Q
    ||||||||||    
T  44304977 attttttaat 44304968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 86810 - 86926
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||| ||||||||| |||||||||| ||| | |||||||| |||| |||||||  ||||||||||||| ||||||| ||||| |||||||| |||||||    
T  86810 catttagtctcttaatttatttttagttttcactttggttccctaactataaagcatctcaatttggtcccataaatattctgccgtttactgttttggt 86909  T
Q  101 catcttcgttaattttt 117  Q
    | ||| ||||| |||||    
T  86910 cttctccgttagttttt 86926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 11113749 - 11113865
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||  | ||| ||||| || |  ||| |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  11113749 catttggtcacttaacttattttcggttttcattttagtcccttaactataaagtgtctcaatttggtctcataactcttctgccgtttaccattttggt 11113848  T
Q  101 catcttcgttaattttt 117  Q
    ||| | ||||| |||||    
T  11113849 catttccgttagttttt 11113865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 53400202 - 53400302
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 110  Q
    |||||||||||||||||||| |||||||| |  ||| ||||||||||||||||||||||  ||||||||| |||||||||| ||||| ||| ||| ||||    
T  53400202 cttaacttatttttagatttcattttggtcccataactataaagtgtctcaatttggtcctataaatcttatgtcgtttaccattttagtcctctccgtt 53400301  T
Q  111 a 111  Q
    |    
T  53400302 a 53400302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 5688727 - 5688636
Alignment:
Q  20 tttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 111  Q
    ||||||| ||| | |||||| | |||| |||||||||||||||||||||  |||||||||| |||||||||||||||||||||||| |||||    
T  5688727 tttttagttttcaatttggtcccctaactataaagtgtctcaatttggttccataaatcttatgtcgtttactattttggtcatctccgtta 5688636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 10403525 - 10403408
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||| |||||||||||||||||| | ||| | |||| || ||||| |||||||||| ||||||||||||||||||||||| |||||||| ||||| |||    
T  10403525 catttagtctcttaacttatttttggttttcactttgatt-tctaactataaagtgtatcaatttggtctcataaatcttcagtcgtttattatttcggt 10403427  T
Q  101 catcttcgttaatttttta 119  Q
    | |||  |||||| |||||    
T  10403426 cctctcggttaatatttta 10403408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 34439722 - 34439644
Alignment:
Q  48 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtata 126  Q
    |||||| ||| ||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| |||| |||||||||    
T  34439722 tataaaatgtttcaatttggtcccataaatcttctgccgtttactattttggtcatctccgttagttttctaatgtata 34439644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 37560408 - 37560298
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||||||||||||||| ||||||||||  | |||||||||| |||||    
T  37560408 catttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttacgacgtttactatcttggt 37560309  T
Q  101 catcttcgtta 111  Q
    | ||| |||||    
T  37560308 cctctccgtta 37560298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 30682728 - 30682813
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgt 87  Q
    |||||||| |||||||||||||||| ||| |||||||| |  ||| |||||||||||| |||||||||| ||||||||||||||||    
T  30682728 atttggtcccttaacttatttttagttttcattttggtcccttaactataaagtgtcttaatttggtcttataaatcttctgtcgt 30682813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 10403298 - 10403386
Alignment:
Q  13 taacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||||||| | ||||| |||||| | |||| |||||||||||| ||||||||||| ||||||||  |||||||||||||||||||    
T  10403298 taacttatttttggtttttactttggtcccctaactataaagtgtcttaatttggtctcgtaaatcttacgtcgtttactattttggtc 10403386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 15445445 - 15445513
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 71  Q
    ||||||| |||||||||||||| ||||| |||||||| | |||||||||||||||||||||||||||||    
T  15445445 tttggtcccttaacttatttttggatttcattttggtcccctaattataaagtgtctcaatttggtctc 15445513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 15787601 - 15787489
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 110  Q
    ||||| |||||||| | ||| |||||||| | |||| |||||||||||||||||||||| ||||| | || || ||||||| ||||||||| ||| | ||    
T  15787601 cttaatttattttttgttttcattttggtcccctaactataaagtgtctcaatttggtcccataacttttttgccgtttaccattttggtcctctccatt 15787502  T
Q  111 aattttttaatgt 123  Q
    |||||||||||||    
T  15787501 aattttttaatgt 15787489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 5687229 - 5687292
Alignment:
Q  48 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 111  Q
    |||||||||||||||||||||| |||||||||| || ||||||||||||||||||||| |||||    
T  5687229 tataaagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcatctccgtta 5687292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 26788540 - 26788639
Alignment:
Q  12 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 111  Q
    ||||||||||||||| ||| | |||||| || ||| |||||| | ||||||||| ||| ||||||||||||| ||||||||||||||||| ||| |||||    
T  26788540 ttaacttatttttagttttcactttggtcctataagtataaaatatctcaatttcgtcccataaatcttctgccgtttactattttggtcctctccgtta 26788639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 40143662 - 40143741
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttc 81  Q
    ||||||||||||||||||||||||| ||| ||||| || | |||| ||||||||||||||||||| |||||||| |||||    
T  40143662 atttggtctcttaacttatttttagttttcattttagtcccctaactataaagtgtctcaatttgctctcataactcttc 40143741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 44 - 166
Target Start/End: Original strand, 6139047 - 6139169
Alignment:
Q  44 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcatt 143  Q
    ||||||| || ||||||||||||||||||||| |||| ||| ||||| ||||||||||||||  |||| | ||||||||| || || | || |||| |||    
T  6139047 taattattaaatgtctcaatttggtctcataactcttatgttgtttattattttggtcatctctgttagtattttaatgtctaatattttttatataatt 6139146  T
Q  144 ttaaccacttgattgcaggtcta 166  Q
    | ||||  |||||||||||||||    
T  6139147 tcaaccgtttgattgcaggtcta 6139169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 26791531 - 26791466
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    |||||||||||||||||||||| ||||||||||| | || |||||||||||||||||||||||||||    
T  26791531 tttggtctcttaacttatttttggattttattttag-tccctaattataaagtgtctcaatttggtc 26791466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 29833381 - 29833489
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||  ||||| |||||||| | ||||||||||| ||||||||||||||| | || ||||| |||||||  || ||||||||     
T  29833381 tttggtcccttaacttattttcggatttcattttggtcccctaattataaaatgtctcaatttggtcccttatatcttttgtcgttacctcttttggtcc 29833480  T
Q  103 tcttcgtta 111  Q
    ||| |||||    
T  29833481 tctccgtta 29833489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 34438460 - 34438512
Alignment:
Q  48 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  34438460 tataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggt 34438512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 48206169 - 48206284
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    |||| ||| |||| |||||||| | ||||||||||||||  |||||||||||||| |||||||| ||  |||| | ||||  ||||||||||||||||||    
T  48206169 tttgatcttttaatttatttttggtttttattttggttccttaattataaagtgtttcaatttgatcctataacttttctaccgtttactattttggtca 48206268  T
Q  103 tcttcgttaatttttt 118  Q
    | | ||||| ||||||    
T  48206269 tttacgttagtttttt 48206284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 3217708 - 3217618
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||||||||||||  |||| | |||||| || ||| | |||||||| | |||||| ||||||||||||||||| ||||||||||||||||    
T  3217708 cttaacttatttttgaatttcactttggtcctttaactttaaagtgttttaatttgatctcataaatcttctgttgtttactattttggtc 3217618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 19049979 - 19049913
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||| ||||| |||||| | | |||||||||||||||||||||||||||    
T  19049979 tttggtcccttaacttatttttggatttcattttgatcccctaattataaagtgtctcaatttggtc 19049913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 37559005 - 37559115
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||  |||||||||||||| | ||| | |||||| | |||| |||||| ||||||||||||||| |||||| |||    ||||||||||||||||    
T  37559005 catttggttccttaacttatttttggttttcaatttggtcccctaactataaaatgtctcaatttggtcccataaaccttacaccgtttactattttggt 37559104  T
Q  101 catcttcgtta 111  Q
    ||||| |||||    
T  37559105 catctccgtta 37559115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 11094544 - 11094649
Alignment:
Q  12 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 111  Q
    |||| |||||||| | ||||| ||||||   |||| |||||||||||| |||||||||  |||||| ||||| |||||||| |||||||| |||||||||    
T  11094544 ttaatttatttttggtttttactttggtctcctaactataaagtgtcttaatttggtcctataaattttctgccgtttactgttttggtcctcttcgtta 11094643  T
Q  112 attttt 117  Q
     |||||    
T  11094644 gttttt 11094649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 30671003 - 30671088
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 88  Q
    |||||||||||||||||||||  ||||| |||||||| |  ||| |||||||||||||||||| ||||| || ||||| |||||||    
T  30671003 tttggtctcttaacttattttcggatttcattttggtcccttaactataaagtgtctcaatttagtctcttatatcttttgtcgtt 30671088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 38419083 - 38419010
Alignment:
Q  44 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 117  Q
    ||||||| |||||| ||||||||||||||||| ||||||| |||||||| |||| ||||||| ||||| |||||    
T  38419083 taattattaagtgtgtcaatttggtctcataagtcttctgccgtttactgttttagtcatctccgttagttttt 38419010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 27410790 - 27410692
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||||||||||||| |||||| ||| | |||  | | |||| |||||||||||||||||||||| ||||||||||||  ||||||| ||||||||    
T  27410790 catttggtctcttaacttaattttagttttcaatttaatcc-ctaactataaagtgtctcaatttggtc-cataaatcttcttccgtttaccattttggt 27410693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 55952833 - 55952932
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| ||||| ||||||||   ||||| ||| || | |||| |||||||||| ||||||||||||||||| |||| ||||||||| |||||||||    
T  55952833 catttggtc-cttaatttatttttgatttttaatttagtcccctaactataaagtgtttcaatttggtctcataactcttatgtcgtttattattttggt 55952931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 160
Target Start/End: Complemental strand, 307882 - 307755
Alignment:
Q  33 ttttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatc 132  Q
    |||| ||||||||| ||||||||||||||||||| || ||||| |||||   | ||||||||| ||||||||| ||||  ||||||||||| ||    |     
T  307882 tttttgttctctaactataaagtgtctcaatttgatcccataagtcttcctccatttactattgtggtcatctccgttggttttttaatgtttaaatttt 307783  T
Q  133 ttgatatcattttaaccacttgattgca 160  Q
    ||||||| ||||||||||  ||||||||    
T  307782 ttgatatgattttaaccatatgattgca 307755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 30683134 - 30683020
Alignment:
Q  3 tttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||||| ||||| |||||||| |||||| |||||||| |  ||| |||||||||||||||||||||| ||||||||||| | |||| | | ||||||||    
T  30683134 tttggtcccttaatttattttt-gattttcattttggtcccttaactataaagtgtctcaatttggtcccataaatcttcggccgttaattcttttggtc 30683036  T
Q  102 atcttcgttaattttt 117  Q
     ||| ||||| |||||    
T  30683035 ttctccgttagttttt 30683020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 123
Target Start/End: Original strand, 38417611 - 38417682
Alignment:
Q  52 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgt 123  Q
    |||||| ||||||||||| |||||||||| ||||||||||||||| |||| ||| ||||| | |||||||||    
T  38417611 aagtgtgtcaatttggtcccataaatcttatgtcgtttactatttcggtcctctccgttagtattttaatgt 38417682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 12396981 - 12396915
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  12396981 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 12396915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 48207824 - 48207726
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||  ||||||||||||| | ||| ||||||||   |||||||||||||||||||||||||||  |||| ||||||  ||||||| ||| |||||    
T  48207824 tttggtcctttaacttattttttgttttcattttggtctcctaattataaagtgtctcaatttggtcatataactcttctaccgtttacaattgtggtc 48207726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 166
Target Start/End: Complemental strand, 50531814 - 50531700
Alignment:
Q  52 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccac 151  Q
    |||||||||||||||||| ||||| |||| |||||||||||||||| ||||| |  |||| | || |||||| || || | || |||| |||| ||||      
T  50531814 aagtgtctcaatttggtcccataactcttttgtcgtttactattttagtcatttctgttagtattctaatgtctaatattttttatataatttcaaccgt 50531715  T
Q  152 ttgattgcaggtcta 166  Q
    |||||||||||||||    
T  50531714 ttgattgcaggtcta 50531700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 193
Target Start/End: Original strand, 3528224 - 3528389
Alignment:
Q  28 ttttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatat 127  Q
    ||||||||||||||  ||| |||||||||||||||||||||| ||||| | |||    |||||||| | | ||| ||| | ||| ||||||||||| ||     
T  3528224 ttttattttggttccttaactataaagtgtctcaatttggtcccataagttttcctctgtttactaatgtagtcctctccattagttttttaatgtctaa 3528323  T
Q  128 taatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatcaacac 193  Q
    |  | || || | |||||||||| ||||||||| ||| || ||| |||| |||||||| |||||||    
T  3528324 ttttttttatgtgattttaaccatttgattgcatgtccattgtatctaatagtgaaccgtcaacac 3528389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 17319096 - 17319149
Alignment:
Q  48 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||||| ||||||||||  ||||||||||||| |||||||||||||||||    
T  17319096 tataaagtgtttcaatttggttccataaatcttctggcgtttactattttggtc 17319149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 55953961 - 55953861
Alignment:
Q  1 catttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttgg 99  Q
    |||||| || |||||||||||||| |||||| | |||||| |  ||| |||||| ||||||||||||||| | |||||||| || |||||||||||||||    
T  55953961 catttgatcccttaacttattttt-gattttcaatttggtcccataactataaaatgtctcaatttggtcccgtaaatcttatgccgtttactattttgg 55953863  T
Q  100 tc 101  Q
    ||    
T  55953862 tc 55953861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 6140413 - 6140353
Alignment:
Q  57 tctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 117  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||| | ||||| |||||    
T  6140413 tctcaatttggttccataactcttctgtcgtttactattttggtcatttccgttagttttt 6140353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 6616320 - 6616220
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||  | ||| | |||||| | |||| ||||||||||||||| |||||| | || || |||||||||||| | |||||||    
T  6616320 catttggtcccttaacttattttccgttttcactttggtcccctaactataaagtgtctcaaattggtcccttatatattctgtcgtttattgttttggt 6616221  T
Q  101 c 101  Q
    |    
T  6616220 c 6616220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 15786959 - 15787075
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    |||||||||  ||||||||||||| | ||| |||||| | | |||| |||||| ||||||||||||||| ||||| | ||||| ||||||  ||| || |    
T  15786959 catttggtccattaacttattttttgttttcattttgttcccctaactataaactgtctcaatttggtcccataacttttctgccgtttatcattatgat 15787058  T
Q  101 catcttcgttaattttt 117  Q
    | ||| |||||||||||    
T  15787059 cctctccgttaattttt 15787075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 39592398 - 39592282
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||  | ||| | ||| || | |||| ||||||||||||||| ||||||   ||  |||||||||||||||| |||||||    
T  39592398 catttggtcccttaacttattttatgttttcactttagtcccctaactataaagtgtctcaaattggtccattatgtcttctgtcgtttactgttttggt 39592299  T
Q  101 catcttcgttaattttt 117  Q
      ||| |||||||||||    
T  39592298 tctctccgttaattttt 39592282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 44128441 - 44128333
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    |||||||  |||||||||||||   ||| | |||||| | |||| |||||||||||||||||| |||   |||||||| || |||||||||||||||||     
T  44128441 tttggtcctttaacttatttttcattttcaatttggtcccctaactataaagtgtctcaatttagtcctttaaatcttatgccgtttactattttggtcc 44128342  T
Q  103 tcttcgtta 111  Q
    ||| |||||    
T  44128341 tctccgtta 44128333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 56001375 - 56001255
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| ||||||||||||||   ||| |||||||  | |||| ||||||||||||||||||||||  ||||   |||   ||||||||| | |||||     
T  56001375 tttggtcccttaacttattttttattttcattttggccccctaactataaagtgtctcaatttggtcctataagctttcctccgtttactaatgtggtcc 56001276  T
Q  103 tcttcgttaattttttaatgt 123  Q
    ||||||||| |||||||||||    
T  56001275 tcttcgttagttttttaatgt 56001255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 50530543 - 50530626
Alignment:
Q  34 tttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 117  Q
    |||||| || ||| ||| |||||||||||  ||||| ||||| |||||| |||||||||||||||||||| |  ||||||||||    
T  50530543 tttggtcctttaactattaagtgtctcaaaatggtcccataactcttctatcgtttactattttggtcatttctgttaattttt 50530626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 56000304 - 56000394
Alignment:
Q  11 cttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||||||||| |||||| |||||| | | |||| |||||||||||||||||| |||  |||| ||||||| ||||||| |||||||||    
T  56000304 cttaacttattttt-gattttcattttgatcccctaactataaagtgtctcaatttagtcctataactcttctgccgtttaccattttggtc 56000394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 23752025 - 23752091
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||||||||| | |||||| | |||| | |||| |||||||||||||||    
T  23752025 tttggtcccttaacttatttttagatttcaatttggtcccctaactttaaattgtctcaatttggtc 23752091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 26121920 - 26121974
Alignment:
Q  44 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 98  Q
    |||||||||||||| |||||||| || ||||||||| |||||||||| |||||||    
T  26121920 taattataaagtgtttcaatttgatcccataaatctcctgtcgtttagtattttg 26121974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 28370748 - 28370682
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||| ||||| | |||||| |||||| | |||| |||||||||||||||    
T  28370748 tttggtcccttaacttatttttggatttcaatttggtcctctaactttaaactgtctcaatttggtc 28370682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 44302729 - 44302843
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| ||||||| ||||||  |||| || |||||  ||||| ||||||||||||||||||| || ||||||| ||||| | ||  || ||||||||     
T  44302729 tttggtcccttaactaatttttgaatttcatattggtcatctaactataaagtgtctcaatttgatcccataaattttctgccattacctcttttggtcc 44302828  T
Q  103 tcttcgttaattttt 117  Q
    ||| ||||| |||||    
T  44302829 tctccgttagttttt 44302843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 52882037 - 52881971
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| ||||| |||||||| |||||||||||||| | || | ||||||||||||||||| ||||    
T  52882037 tttggtcccttaatttatttttggattttattttggtcccctgactataaagtgtctcaattaggtc 52881971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 53401558 - 53401492
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||| ||||||||||| || |  ||| |||||| |||||||||||||||    
T  53401558 tttggtcccttaacttatttttggattttattttagtcccataactataaactgtctcaatttggtc 53401492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 43895650 - 43895577
Alignment:
Q  77 tcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaacca 150  Q
    |||||| |||||  ||||||||||||||| ||||||||||||||||| || || | ||||| | ||||||||||    
T  43895650 tcttctctcgttatctattttggtcatctccgttaattttttaatgtctaatatttttgatgtaattttaacca 43895577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 44126605 - 44126705
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctca--atttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||| ||||||||||||||   ||| | ||||||  ||||| ||||||| ||||||  |||||||| | |||||||| || ||||||||||||||||    
T  44126605 tttggtcccttaacttatttttcattttcaatttggtcttctaactataaagagtctcacaatttggtcccttaaatcttatgccgtttactattttggt 44126704  T
Q  101 c 101  Q
    |    
T  44126705 c 44126705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 52658920 - 52659081
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| ||||||||||||||   ||| | |||||| | |||| |||||| ||| ||||||||||   |||||||||||| ||||||| | ||| ||||    
T  52658920 tttggtcccttaacttattttttattttcactttggtcccctaactataaaatgtttcaatttggttctataaatcttctgccgtttaccagtttagtca 52659019  T
Q  103 tcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 164  Q
    | | ||||  |||||||||||  | || | |||||||  ||| ||||| | |||||||||||    
T  52659020 tttccgtttgttttttaatgttaaatatttttgatattgtttcaaccattcgattgcaggtc 52659081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 29663691 - 29663746
Alignment:
Q  43 ctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 98  Q
    |||| |||||| ||||||||||||||| ||||| ||||||| ||||||| ||||||    
T  29663691 ctaactataaattgtctcaatttggtcccataactcttctgccgtttaccattttg 29663746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 39590948 - 39591135
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||||||||  ||||| | ||   | ||||||||||||| |||| ||    
T  39590948 catttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaaactggtcccttatgccatctgtcgtttactgttttagt 39591047  T
Q  101 catcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatc 188  Q
    | ||   |||| |||||| |||| || || | || |||| ||| |||||  ||||||||||||| || |||  | | |||||||||||    
T  39591048 cctcgcagttagtttttttatgtctaatatttttaatatgattataaccgtttgattgcaggtccatagtatattacagtgaaccatc 39591135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 52660296 - 52660221
Alignment:
Q  28 ttttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcat 103  Q
    ||||||||||||   |||| |||||||| ||| |||| |||| ||||||||||||| ||||||| |||||| ||||    
T  52660296 ttttattttggtctcctaactataaagtatcttaattcggtcccataaatcttctgccgtttaccattttgatcat 52660221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 52880830 - 52880889
Alignment:
Q  11 cttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtc 69  Q
    |||||||||||||  |||||| |||||||| | |||| ||||||||||||||||||||||    
T  52880830 cttaacttattttcggatttttattttggtcccctaactataaagtgtctcaatttggtc 52880889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 526826 - 526760
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| ||||| |||||||  ||||| |||||||| | |||| ||||||||||||||| ||||||    
T  526826 tttggtcccttaatttattttcggatttcattttggtcccctaactataaagtgtctcaacttggtc 526760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 937205 - 937143
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 65  Q
    ||||||| ||||| |||||||  ||||| |||||||| | |||| ||||||||||||||||||    
T  937205 tttggtcccttaatttattttcggatttcattttggtcccctaactataaagtgtctcaattt 937143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 2310889 - 2310823
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||   |||| |||||||| | |||| |||||| |||||||||||||||    
T  2310889 tttggtcccttaacttattttcgaatttcattttggtcccctaactataaaatgtctcaatttggtc 2310823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 30672171 - 30672105
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||  ||||| |||||||| |  ||| | ||||||||||||||||||||    
T  30672171 tttggtcccttaacttattttcggatttcattttggtcccgtaactttaaagtgtctcaatttggtc 30672105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 38555375 - 38555317
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    |||||||||||||||| ||||| |||||| | |||| |||||||||| | |||||||||    
T  38555375 cttaacttatttttagtttttactttggtcccctaactataaagtgtattaatttggtc 38555317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 44690962 - 44690900
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 65  Q
    ||||||| |||||||||||||  ||||| ||||||||||  ||| |||||| |||||||||||    
T  44690962 tttggtcccttaacttattttcggatttcattttggttccataactataaaatgtctcaattt 44690900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 29686263 - 29686380
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||| ||| |||||||||||||| | ||| | |||||| |  ||| |||||| |||||||| |||||| | ||  |||| |||||||  || |||||||    
T  29686263 catttagtcccttaacttatttttggttttcactttggtcccttaactataaattgtctcaaattggtcccttatgtcttatgtcgttacctcttttggt 29686362  T
Q  101 catcttcgttaatttttt 118  Q
    | ||| ||||||||||||    
T  29686363 cctctccgttaatttttt 29686380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 43419437 - 43419384
Alignment:
Q  48 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||||||||||||||||| | ||| ||||||| ||||  |||||||||||    
T  43419437 tataaagtgtctcaatttggtcccttaactcttctgccgttacctattttggtc 43419384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 44159143 - 44159208
Alignment:
Q  52 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 117  Q
    |||||| ||||||||||  || || ||||||| |||||| |||||||||||||| ||||| |||||    
T  44159143 aagtgtttcaatttggttccacaactcttctgccgtttattattttggtcatctccgttagttttt 44159208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 56297783 - 56297714
Alignment:
Q  6 ggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    |||| ||||||||||||||  |||| |||||| | |  ||||| |||| |||||||||||||||||||||    
T  56297783 ggtcccttaacttatttttgaatttcattttgatcccttaattttaaactgtctcaatttggtctcataa 56297714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 2309853 - 2309916
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctc-taattataaagtgtctcaatttg 66  Q
    ||||||| ||||| |||||||| ||||| |||||||| ||| |||||||||||||| ||||||||    
T  2309853 tttggtcccttaatttatttttggatttcattttggt-ctcataattataaagtgtttcaatttg 2309916  T

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Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 26202493 - 26202421
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    ||||||| ||||||||||||||  |||| |||||||| |  ||| | |||| ||||||||||||||| |||||    
T  26202493 tttggtcccttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtcccataa 26202421  T

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Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 31712567 - 31712499
Alignment:
Q  49 ataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 117  Q
    ||||||||| |||||||| || ||||| ||||||  ||||||| ||||||||||| | |||| ||||||    
T  31712567 ataaagtgtttcaatttgatcccataagtcttcttccgtttaccattttggtcatttccgtttattttt 31712499  T

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Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 43894122 - 43894186
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    |||||||||||||| | ||| | |||||| | |||| |||||| ||||||||||||||| |||||    
T  43894122 cttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcacataa 43894186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 43895704 - 43895648
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtct 59  Q
    ||||||| |||||||||||||| |  |||| |||||| | |||||||||||||||||    
T  43895704 tttggtcccttaacttatttttggtatttagtttggtcccctaattataaagtgtct 43895648  T

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Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 44655730 - 44655766
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggt 39  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  44655730 tttggtcccttaacttattttttgattttattttggt 44655766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 44664433 - 44664397
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggt 39  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  44664433 tttggtcccttaacttatttttggattttattttggt 44664397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 47668706 - 47668606
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    |||||||||  ||||||||||||  | ||| | |||||| | |||| ||||||||||||||| |||||| | || ||| |||| |||||| | |||||||    
T  47668706 catttggtcctttaacttattttctgttttcactttggtcccctaactataaagtgtctcaaattggtcccttatatcatctgccgtttattgttttggt 47668607  T
Q  101 c 101  Q
    |    
T  47668606 c 47668606  T

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Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 85)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 43936247 - 43936132
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||| ||||| |||||||| |||||| |||||||| ||| ||||||||||||||| |||||||||||||||||||||||||     
T  43936247 tttggtcccttaacttatttttggatttcattttggtcctctaactataaagtttcttaatttggtctcataattcttctgtcgtttactattttggtcc 43936148  T
Q  103 tcttcgttaatttttt 118  Q
    ||| ||||| ||||||    
T  43936147 tctccgttagtttttt 43936132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 19278360 - 19278470
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| ||||| |||||||| |  |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  19278360 catttggtcccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttggtcccataattcttctgccgtttactattttggt 19278459  T
Q  101 catcttcgtta 111  Q
    | |||||||||    
T  19278460 cctcttcgtta 19278470  T

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Target: chr7; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 44 - 197
Target Start/End: Original strand, 27897742 - 27897896
Alignment:
Q  44 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcatt 143  Q
    |||||||||| ||| ||||||||||| |||||||  | |||| | |||||||||  |||| | | ||||||||||||||||||||| |||||||||||||    
T  27897742 taattataaaatgtttcaatttggtcccataaattatttgtcatctactattttaatcatttcccttaattttttaatgtatattattcttgatatcatt 27897841  T
Q  144 ttaaccacttgattgcaggtctatggtaact-aagagtgaaccatcaacacttga 197  Q
    ||||||||||||||||||||||||  ||  | |||||||||||||| ||||||||    
T  27897842 ttaaccacttgattgcaggtctataatatttaaagagtgaaccatcgacacttga 27897896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 43935194 - 43935288
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 97  Q
    ||||||| |||||||||||||| ||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43935194 tttggtcccttaacttatttttggatttcattttggtcctctaactataaagtgtctcaatttggtctcataaatcttctgccgtttactatttt 43935288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 7347327 - 7347233
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 97  Q
    ||||||| ||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||  ||||||||| |||||||||| |||||    
T  7347327 tttggtcccttaacttaattttagattttattttggttccataattataaagtgtctcaatttggtcctataaatcttatgtcgtttaccatttt 7347233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 13446767 - 13446645
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | ||| | |||||||||  || |||| ||||||||||||||||| ||||||||||||| |||||| ||| |||||    
T  13446767 catttggtcacttaacttatttttggttttcactttggttcttcaactatatagtgtctcaatttggtcccataaatcttctgccgtttattatattggt 13446668  T
Q  101 catcttcgttaattttttaatgt 123  Q
    | ||| ||||| |||||||||||    
T  13446667 cctctccgttagttttttaatgt 13446645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 35127850 - 35127934
Alignment:
Q  34 tttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaatttttt 118  Q
    ||||||||||||| |||||| ||||||||||| ||| |||||||||| || ||||||||||||||||||||||||||||| ||||    
T  35127850 tttggttctctaactataaaatgtctcaattttgtcccataaatcttatgccgtttactattttggtcatcttcgttaatatttt 35127934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 12 - 159
Target Start/End: Complemental strand, 24873695 - 24873548
Alignment:
Q  12 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 111  Q
    ||||||||||||| | ||| |||||| | | |||| |||||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||| | ||||     
T  24873695 ttaacttattttttgttttcattttgatgccctaactataaagtgtctcaatttggtcccataagtcttctgccgtttaccattttggtcatttccgttt 24873596  T
Q  112 attttttaatgtatattaatcttgatatcattttaaccacttgattgc 159  Q
     ||||||||||| || || | |||||||  ||| ||||| ||||||||    
T  24873595 gttttttaatgtttactatttttgatattgtttcaaccatttgattgc 24873548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 47163170 - 47163277
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 110  Q
    ||||| |||||||| |||||||||||||| |||||| ||||||||| || ||||||||| |||||||||| |  ||||||||||||||||| ||| ||||    
T  47163170 cttaatttatttttggattttattttggtcctctaactataaagtgccttaatttggtcccataaatctttttccgtttactattttggtcctctccgtt 47163269  T
Q  111 aatttttt 118  Q
    | ||||||    
T  47163270 agtttttt 47163277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 19279719 - 19279621
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||||||||||||||| ||||||| || ||||||||||||||||||||    
T  19279719 tttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaattttttgtcgtttactattttggtc 19279621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 22060470 - 22060580
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||  | ||||| |||||| |||||| |||||||||||||||||||||  || || |||| || ||||||||||||||||    
T  22060470 catttggtcacttaacttattttgtgtttttaatttggtcctctaactataaagtgtctcaatttggttccacaagtcttatgccgtttactattttggt 22060569  T
Q  101 catcttcgtta 111  Q
    ||||| |||||    
T  22060570 catctccgtta 22060580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 4858453 - 4858357
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 97  Q
    ||||||||| |||||||||||||||| ||| | |||| | | |||| |||||| ||||||||||||||| |||||||||||||| ||||||||||||    
T  4858453 catttggtcccttaacttatttttagttttcactttgatcccctaactataaaatgtctcaatttggtcccataaatcttctgttgtttactatttt 4858357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 36702786 - 36702886
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||||||||| |||||||| |  ||| | |||| ||||||||||||||| ||||||| ||||| |||||||||||||| |||    
T  36702786 tttggtcccttaacttatttttagatttcattttggtcccttaactttaaactgtctcaatttggtcccataaatattctgccgtttactattttgatca 36702885  T
Q  103 t 103  Q
    |    
T  36702886 t 36702886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 41126248 - 41126360
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| ||||||||||||| |||||| |||||||| | |||| |||||||||||||||||||||| | ||  ||||||||||||  || ||||||||     
T  41126248 tttggtcccttaacttattttcagatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcc 41126347  T
Q  103 tcttcgttaattt 115  Q
    ||| |||||||||    
T  41126348 tctccgttaattt 41126360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 13 - 111
Target Start/End: Original strand, 48754015 - 48754113
Alignment:
Q  13 taacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 111  Q
    ||||||||||||||||||||||||||| |  |||||||||||||| ||||||| |||  ||||||||| |||||||||| ||||| ||| ||| |||||    
T  48754015 taacttatttttagattttattttggtcccataattataaagtgtttcaatttagtcctataaatcttatgtcgtttaccattttagtcctctccgtta 48754113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 43930326 - 43930442
Alignment:
Q  1 catttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttgg 99  Q
    ||||||||| |||||||||||||| |||||| | |||||| | |||| ||| ||  ||||||||||||||  ||||||||||||||||||||||||||||    
T  43930326 catttggtcccttaacttattttt-gattttcactttggtcccctaactattaaacgtctcaatttggtcctataaatcttctgtcgtttactattttgg 43930424  T
Q  100 tcatcttcgttaattttt 117  Q
    || |||  ||||||||||    
T  43930425 tcctctctgttaattttt 43930442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 48672883 - 48672774
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||||||||| |||||||| | ||||| ||||||||  | ||| |||||||||||||||||||| ||||||||   |||||||||||||||| |||    
T  48672883 atttggtctcttaatttattttttgtttttaatttggttccattattgtaaagtgtctcaatttggtcccataaatcgcgtgtcgtttactattttagtc 48672784  T
Q  102 atcttcgtta 111  Q
     ||| |||||    
T  48672783 ctctccgtta 48672774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 14206722 - 14206800
Alignment:
Q  43 ctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaat 121  Q
    |||| |||||| ||| |||||||||||  ||||||||||||||||||||||||||| |||||| ||||| |||||||||    
T  14206722 ctaactataaaatgtttcaatttggtcctataaatcttctgtcgtttactattttgctcatctccgttagttttttaat 14206800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 14215412 - 14215490
Alignment:
Q  43 ctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaat 121  Q
    |||| |||||| ||| |||||||||||  ||||||||||||||||||||||||||| |||||| ||||| |||||||||    
T  14215412 ctaactataaaatgtttcaatttggtcctataaatcttctgtcgtttactattttgctcatctccgttagttttttaat 14215490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 22744753 - 22744870
Alignment:
Q  1 catttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttgg 99  Q
    ||||||||| |||||||||||||| |||||| | ||| || | |||| |||||||||| |||||||||||  ||||||||| || |||||||||||||||    
T  22744753 catttggtcccttaacttattttt-gattttcaatttagtcccctaactataaagtgtttcaatttggtcctataaatcttatgccgtttactattttgg 22744851  T
Q  100 tcatcttcgttaatttttt 118  Q
    || ||| ||||||| ||||    
T  22744852 tcttctccgttaatatttt 22744870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 40926628 - 40926506
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||| ||| |||||||||||||| | ||| | |||||| | |||| ||||||||||||||||||||||  |||||| ||||  |||||||  |||||||    
T  40926628 catttagtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcctataaattttctaccgtttaccgttttggt 40926529  T
Q  101 catcttcgttaattttttaatgt 123  Q
    | ||| |||||| ||||||||||    
T  40926528 cctctccgttaactttttaatgt 40926506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 43006392 - 43006502
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | ||| | |||||| | |||| ||| |||||||||||||||||| | ||| |||| || ||||| ||||||||||    
T  43006392 catttggtcccttaacttatttttggttttcaatttggtcccctaactattaagtgtctcaatttggtcccctaagtcttatgccgtttgctattttggt 43006491  T
Q  101 catcttcgtta 111  Q
    ||||| |||||    
T  43006492 catctccgtta 43006502  T

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Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 22746428 - 22746319
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||||||  ||||||||||||| | ||| | ||| || | |||| |||||||||||||||||||||| |||||||||| || |||||||||||||| ||    
T  22746428 atttggtcctttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatcttgtgccgtttactattttgatc 22746329  T
Q  102 atcttcgtta 111  Q
     ||| |||||    
T  22746328 ctctccgtta 22746319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 36703060 - 36702959
Alignment:
Q  1 catttggtctcttaacttatttttag-attttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttgg 99  Q
    ||||||||| |||||||||||||| | |||| ||||| || | |||| | |||| ||||||||||||||| ||||||| ||||| |||||||||||||||    
T  36703060 catttggtcccttaacttattttttggatttcattttagtcccctaaatttaaactgtctcaatttggtcccataaatattctgccgtttactattttgg 36702961  T
Q  100 tc 101  Q
    ||    
T  36702960 tc 36702959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 43007758 - 43007662
Alignment:
Q  1 catttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 97  Q
    |||||||||  | ||||||||||| |||||| | |||||| |||||| |||||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  43007758 catttggtccttcaacttattttt-gattttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttatgtcgtttactatttt 43007662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 18802498 - 18802402
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 97  Q
    ||||||||| |||||||||||||| | ||| |||||| | | |||| |||||||||||||||||| ||| ||||||| |||| ||||| ||||||||    
T  18802498 catttggtcccttaacttattttttgttttcattttgatcccctaactataaagtgtctcaatttagtcccataaattttctatcgttcactatttt 18802402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 41618606 - 41618498
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||| ||||| |||||||| | ||||||||||||||||| |||||||||   ||  ||||||||||||  || ||||||||     
T  41618606 tttggtcccttaacttatttttggatttcattttggtcccctaattataaagtgtctaaatttggtccattatgtcttctgtcgttacctcttttggtcc 41618507  T
Q  103 tcttcgtta 111  Q
    ||| |||||    
T  41618506 tctccgtta 41618498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 14107839 - 14108002
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    |||||||||  ||||||||||||| | ||| |||||||| |  ||| |||||||||||||||  ||||| | || ||||||||||||| ||  |||||||    
T  14107839 catttggtcatttaacttatttttggttttcattttggtcccttaactataaagtgtctcaaagtggtcccttatatcttctgtcgttcaccgttttggt 14107938  T
Q  101 catcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 164  Q
    | ||| ||||| |||||| |||| || || | || |||| ||| |||||  |||||||||||||    
T  14107939 cctctccgttagttttttgatgtctaatatttttaatataattataaccgtttgattgcaggtc 14108002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 14417796 - 14417959
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    |||||||||  ||||||||||||| | ||| |||||||| |  ||| |||||||||||||||  ||||| | || ||||||||||||| ||  |||||||    
T  14417796 catttggtcatttaacttatttttggttttcattttggtcccttaactataaagtgtctcaaagtggtcccttatatcttctgtcgttcaccgttttggt 14417895  T
Q  101 catcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 164  Q
    | ||| ||||| |||||| |||| || || | || |||| ||| |||||  |||||||||||||    
T  14417896 cctctccgttagttttttgatgtctaatatttttaatataattataaccgtttgattgcaggtc 14417959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 38406026 - 38406141
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||||||  |||| |||||||| | ||| |||||||| | |||| |||||||||||||||  ||||  ||||||||||||| |||||||| ||||||||    
T  38406026 atttggtcctttaatttatttttggttttcattttggtcccctaactataaagtgtctcaaactggttccataaatcttctgacgtttactgttttggtc 38406125  T
Q  102 atcttcgttaattttt 117  Q
     | | |||||||||||    
T  38406126 ctttccgttaattttt 38406141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 13446388 - 13446450
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 65  Q
    |||||||  |||||||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  13446388 tttggtcctttaacttatttttgaattttattttggttctctaactataaagtgtctcaattt 13446450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 17288327 - 17288249
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttc 81  Q
    ||||||| |||||||||||||| | ||| |||||||| | |||| |||||||||||||||||||||| ||||| |||||    
T  17288327 tttggtcccttaacttattttttgttttaattttggtcccctaactataaagtgtctcaatttggtcccataagtcttc 17288249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 18801224 - 18801298
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaat 77  Q
    ||||||| ||||||||||||||  |||| |||||||| | |||| |||||||||||||||||||||| |||||||    
T  18801224 tttggtcccttaacttatttttgaatttcattttggtcccctaactataaagtgtctcaatttggtcccataaat 18801298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 19848941 - 19848867
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaat 77  Q
    ||||||| |||||||||||||| ||||| |||||||| |  ||| |||||||||||||||||||||| |||||||    
T  19848941 tttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataaat 19848867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 36673943 - 36673845
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||||| |||||||||||||  |||||||||||||| | |||| |||||| ||||||||||||||| | ||  ||||||||||||  || ||||||||    
T  36673943 tttggtcccttaacttattttcggattttattttggtcccctaactataaaatgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtc 36673845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 38002621 - 38002555
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||||||||||||||||| |||||| |||||||| |  ||| ||||||||||||||||||||||    
T  38002621 tttggtctcttaacttattttcagatttcattttggtcccttaactataaagtgtctcaatttggtc 38002555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 41516453 - 41516379
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    |||||||||||||||||||||||| | ||| |||||||| | |||| |||||||||||| ||||||||| |||||    
T  41516453 catttggtctcttaacttattttttgttttaattttggtcccctaactataaagtgtcttaatttggtcccataa 41516379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 46675043 - 46674933
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    |||||| || |||||||||||||| | ||| | |||| | |  ||| ||||||||||||| |||||||| |||||||||| || ||||||||||||||||    
T  46675043 catttgatcccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcgatttggtcccataaatcttttgccgtttactattttggt 46674944  T
Q  101 catcttcgtta 111  Q
    | ||| |||||    
T  46674943 cctctccgtta 46674933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 25153665 - 25153765
Alignment:
Q  1 catttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttgg 99  Q
    ||||||||| |||||||||||||  |||||| | |||||| | |||| |||||||||||||||||||||| ||||||||||||  |||||||  ||||||    
T  25153665 catttggtcccttaacttattttc-gattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttcttccgtttaccgttttgg 25153763  T
Q  100 tc 101  Q
    ||    
T  25153764 tc 25153765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 41515014 - 41515162
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 110  Q
    ||||| |||||||| | ||| |||||||||| |||| |||||||||| ||||||||||| ||||| |||||    |||||||||| ||||  ||| ||||    
T  41515014 cttaatttatttttggttttaattttggttc-ctaactataaagtgtttcaatttggtcccataagtcttcatatgtttactattgtggttctctccgtt 41515112  T
Q  111 aattttttaatgtatattaatcttgatatcattttaaccacttgattgca 160  Q
    ||||||||||||| ||    | || |||| |||||||||| |||||||||    
T  41515113 aattttttaatgtctaaagttttttatatgattttaaccatttgattgca 41515162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 4857208 - 4857324
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    |||||| || |||||||||||||| | ||| | |||||| | |||| |||||| |||||| |||||||| || |||||||||| |||||||| |||| ||    
T  4857208 catttgatcccttaacttatttttggttttcactttggtcccctaactataaaatgtctcgatttggtcccacaaatcttctgccgtttactgttttagt 4857307  T
Q  101 catcttcgttaattttt 117  Q
    | ||| ||||| |||||    
T  4857308 cctctccgttagttttt 4857324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 26406180 - 26406248
Alignment:
Q  49 ataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 117  Q
    |||||||||||||||||| |||||||| ||||||| ||||||  ||||||||||||| ||||| |||||    
T  26406180 ataaagtgtctcaatttgatctcataactcttctgccgtttaacattttggtcatctccgttatttttt 26406248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 30222655 - 30222763
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    |||||||  |||| |||||||| ||||| |||||||| | ||||||||||||| ||||||||||||| | ||  ||||||||||||  || ||||||||     
T  30222655 tttggtcctttaatttatttttggatttcattttggtcccctaattataaagtatctcaatttggtcccttatgtcttctgtcgttacctcttttggtcc 30222754  T
Q  103 tcttcgtta 111  Q
    ||| |||||    
T  30222755 tctccgtta 30222763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 33341306 - 33341373
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctc-taattataaagtgtctcaatttggtc 69  Q
    ||||||||||||||||||||||| ||||||||||||| |||| ||| |||||| |||||||||||||||    
T  33341306 atttggtctcttaacttatttttggattttattttgg-tctcataactataaattgtctcaatttggtc 33341373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 33459640 - 33459572
Alignment:
Q  13 taacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttc 81  Q
    |||||||||||| | ||| |||||||| |||||| |||||||||||||||||||||| ||||| |||||    
T  33459640 taacttatttttggttttcattttggtcctctaactataaagtgtctcaatttggtcccataagtcttc 33459572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 34557414 - 34557506
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcat 103  Q
    |||||||||||||  |||||||||||||| | |||| |||||||||||||||||||||| | ||  |||| || |||||| | ||||||||||    
T  34557414 cttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgccgtttattcttttggtcat 34557506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 45721865 - 45721753
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 110  Q
    |||||||||||||||| ||| |||||||| | |||| |||||||||||||||||||||  ||||| | |||   ||||||||| | || || ||| ||||    
T  45721865 cttaacttatttttagttttcattttggtcccctaactataaagtgtctcaatttggttccataagttttcctccgtttactaatgtgatcctctccgtt 45721766  T
Q  111 aattttttaatgt 123  Q
    | |||||||||||    
T  45721765 agttttttaatgt 45721753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 1884249 - 1884315
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| ||||||||||||||  ||||||||||||| |  |||||||||| |||||||||||||||    
T  1884249 tttggtcccttaacttatttttgaattttattttggtcccttaattataaaatgtctcaatttggtc 1884315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 22061904 - 22061794
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||| ||| |||||||||||||  | ||| | |||||| | |||| ||||||  |||||||||||||| |||||||||| || ||||||||||||| ||    
T  22061904 cattttgtcccttaacttattttgtgttttcaatttggtcccctaactataaaacgtctcaatttggtcccataaatcttatgccgtttactattttagt 22061805  T
Q  101 catcttcgtta 111  Q
    | ||| |||||    
T  22061804 cttctccgtta 22061794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 41616633 - 41616699
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  41616633 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 41616699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 48 - 110
Target Start/End: Complemental strand, 46458775 - 46458713
Alignment:
Q  48 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 110  Q
    |||||||||||||||||||||| ||||||||||||  ||||||| ||||||||| ||| ||||    
T  46458775 tataaagtgtctcaatttggtcccataaatcttcttccgtttaccattttggtcctctccgtt 46458713  T

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Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 7148157 - 7148068
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    |||||||||||||  | ||| | ||||||  ||||| |||||||||| ||||||||||| | |||||||| ||||||||||| |||||||    
T  7148157 cttaacttattttctgttttcaatttggtcatctaactataaagtgtttcaatttggtcccttaaatcttatgtcgtttactgttttggt 7148068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 25155045 - 25154936
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | ||| | |||| | |  ||| ||||||||||||||||||  |||||||||||||||   |||||  ||||||||    
T  25155045 catttggtcccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatttaatctcataaatcttcttctgtttatcattttggt 25154946  T
Q  101 catcttcgtt 110  Q
    ||||| ||||    
T  25154945 catctccgtt 25154936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 45719664 - 45719721
Alignment:
Q  43 ctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||| ||||||||    
T  45719664 ctaactataaagtgtctaaatttggtctcataactcttctgttgtttaccattttggt 45719721  T

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Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 1970824 - 1970896
Alignment:
Q  5 tggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaat 77  Q
    ||||||||||| |||||||| | ||||| ||||||||  ||| |||||||||| ||||||||||| |||||||    
T  1970824 tggtctcttaatttatttttggtttttactttggttccttaactataaagtgtttcaatttggtcccataaat 1970896  T

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Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 12 - 164
Target Start/End: Original strand, 25532164 - 25532314
Alignment:
Q  12 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 111  Q
    ||||||||||||| | ||| | |||||| | |||| |||||||||| || |||| |||||||||||||| ||  ||||||||||| | ||   |||||||    
T  25532164 ttaacttattttttg-tttcaatttggtcccctaactataaagtgtttcgatttagtctcataaatcttttgcagtttactatttag-tctctttcgtta 25532261  T
Q  112 attttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 164  Q
     ||||||||||| || || | ||||||| |||| ||||| | |||||||||||    
T  25532262 gttttttaatgtttaatatttttgatatgatttcaaccattcgattgcaggtc 25532314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 38001513 - 38001613
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||   |||| |||||||| |||||| |||||||||| ||||||||||| | ||  |||| |||||||  || |||||||||    
T  38001513 tttggtcccttaacttattttcgaatttcattttggtcctctaactataaagtgtttcaatttggtcccttatgtcttttgtcgttatctcttttggtca 38001612  T
Q  103 t 103  Q
    |    
T  38001613 t 38001613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 43931917 - 43931853
Alignment:
Q  59 tcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgt 123  Q
    ||||||||||| |||||| |||||||| |||||||||||||||  || ||||| |||||||||||    
T  43931917 tcaatttggtcccataaaccttctgtcatttactattttggtcccctccgttagttttttaatgt 43931853  T

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Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 46457087 - 46457179
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcat 103  Q
    |||||||||||||| | ||| | |||| | |  ||| |||||||||||||||||||||| ||||||||||||  | ||||| |||||||||||    
T  46457087 cttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatttggtcccataaatcttcttccatttaccattttggtcat 46457179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 27899290 - 27899223
Alignment:
Q  34 tttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||| || ||| |||||| | |||||||||| || |||||||||| ||||||||||||||||||||    
T  27899290 tttggtcctttaactataaaatatctcaatttgatcccataaatcttttgtcgtttactattttggtc 27899223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 1885348 - 1885282
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| ||||||||||||||  |||| |||||||| |  |||||||||||| |||||||||||||    
T  1885348 tttggtcccttaacttatttttgaatttcattttggtcccttaattataaagtatctcaatttggtc 1885282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 28326497 - 28326340
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||| || ||||| |||||||| | ||||||||||||   || | |||||||||||||||||||||   |||| |||||   ||||||||||| |||||    
T  28326497 atttgatcccttaatttatttttgg-ttttattttggtctcctgactataaagtgtctcaatttggttctataagtcttcctccgtttactattgtggtc 28326399  T
Q  102 atcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgca 160  Q
     ||| ||||| ||||||||||| ||    | || |||| |||||||||| |||||||||    
T  28326398 ctctccgttagttttttaatgtctaaattttttaatatgattttaaccatttgattgca 28326340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 30224083 - 30224017
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| |||||| |||||||||||||||    
T  30224083 tttggtcccttaacttattttcggatttcattttggtcccctaactataaattgtctcaatttggtc 30224017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 33458317 - 33458426
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    |||||||||  ||||||||||||| | ||| |||||||| || ||| ||||||||||||||| || ||| ||||| ||||||  ||||||||| | ||||    
T  33458317 catttggtcctttaacttatttttggttttcattttggtcctttaactataaagtgtctcaa-ttagtcccataagtcttcttccgtttactaatgtggt 33458415  T
Q  101 catcttcgtta 111  Q
    | ||| |||||    
T  33458416 cctctccgtta 33458426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 34558408 - 34558342
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| |||||||| |||||||||||||    
T  34558408 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtatctcaatttggtc 34558342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 38408383 - 38408283
Alignment:
Q  1 catttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttgg 99  Q
    ||||||||| ||||| |||||||| |||||| | |||||| |||||| ||||||||||||||| |||||| | ||  ||||||| ||||  |||||||||    
T  38408383 catttggtcccttaatttattttt-gattttcactttggtcctctaactataaagtgtctcaaattggtcccttatgtcttctgccgttatctattttgg 38408285  T
Q  100 tc 101  Q
    ||    
T  38408284 tc 38408283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 48671085 - 48671179
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggt-tctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattt 96  Q
    ||||||||||||||| |||||||| | ||||| |||| | ||| ||| |||||||| |||||||||| || |||||||||| || ||||||||||||    
T  48671085 catttggtctcttaatttatttttggtttttaatttgatctct-taactataaagtatctcaatttgatc-cataaatcttatgccgtttactattt 48671179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 10256181 - 10256232
Alignment:
Q  52 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcat 103  Q
    |||||||||||  ||||||||||| |||||| ||||||| ||||||||||||    
T  10256181 aagtgtctcaaaatggtctcataactcttctatcgtttagtattttggtcat 10256232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 166
Target Start/End: Complemental strand, 10257444 - 10257332
Alignment:
Q  52 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccac 151  Q
    |||||||||||||||||| ||||| |||  |||||||||||||||| ||||| |  |||| | || |||||| || || | || |||| |||| ||||      
T  10257444 aagtgtctcaatttggtcccataactct--tgtcgtttactattttagtcatttctgttagtattctaatgtctaatattttttatataatttcaaccgt 10257347  T
Q  152 ttgattgcaggtcta 166  Q
    |||||||||||||||    
T  10257346 ttgattgcaggtcta 10257332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 48755655 - 48755592
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 66  Q
    ||||||| ||||||||||||||  |||| |||||||| || ||| |||||| ||||||||||||    
T  48755655 tttggtcccttaacttatttttgaatttcattttggtcctataactataaaatgtctcaatttg 48755592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 2903061 - 2903119
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    |||||||||||||  ||||| |||||| ||  |||| ||||||||||||||||||||||    
T  2903061 cttaacttattttcggatttcattttgatttcctaactataaagtgtctcaatttggtc 2903119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 7345923 - 7345989
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||| ||||| |||||||| |  ||| |||||| ||||| |||||||||    
T  7345923 tttggtcccttaacttatttttggatttcattttggtcccataaatataaactgtcttaatttggtc 7345989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 18670610 - 18670544
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||| |||||||||||||| |  ||| | |||| |||||||| ||||||    
T  18670610 tttggtcccttaacttatttttggattttattttggtcccttaactttaaaatgtctcaaattggtc 18670544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 21171593 - 21171527
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||| ||||| | |||||| | |||| | |||| |||||||||||||||    
T  21171593 tttggtcccttaacttatttttggatttcaatttggtcccctaactttaaattgtctcaatttggtc 21171527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 28325080 - 28325153
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    ||||||||| |||||||||||||| | ||| |||||||| | |||| | |||||| ||||||||||||| |||||    
T  28325080 catttggtc-cttaacttatttttggttttaattttggtcccctaactttaaagtatctcaatttggtcccataa 28325153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 101
Target Start/End: Complemental strand, 35128242 - 35128200
Alignment:
Q  59 tcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||||||  ||||||||| ||||||||||||||||||||    
T  35128242 tcaatttggtcctataaatcttatgtcgtttactattttggtc 35128200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 35480217 - 35480278
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 65  Q
    ||||||| |||||||||||||  ||||| ||||||| || |||| ||||||||||||||||||    
T  35480217 tttggtcccttaacttattttcggatttcattttgg-tccctaactataaagtgtctcaattt 35480278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 41127270 - 41127212
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    |||||||||||||  ||||| |||||||| | |||| |||||||| |||||||||||||    
T  41127270 cttaacttattttcggatttcattttggtcccctaactataaagtatctcaatttggtc 41127212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 45089489 - 45089598
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 110  Q
    |||||||||||||| | ||| |||||||| ||||| | |||||||||||||||||  || ||||||| |||   |||||||||   | ||||| | ||||    
T  45089489 cttaacttatttttggttttcattttggtcctctact-ataaagtgtctcaatttaatcccataaattttcctccgtttactaacgtagtcatatccgtt 45089587  T
Q  111 aattttttaat 121  Q
    |||||||||||    
T  45089588 aattttttaat 45089598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 35315288 - 35315235
Alignment:
Q  44 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 97  Q
    ||||||| |||| | ||||||||||| ||||| |||||||||||||||| ||||    
T  35315288 taattattaagtatgtcaatttggtcccataagtcttctgtcgtttactgtttt 35315235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 46673512 - 46673596
Alignment:
Q  16 cttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||||||| | ||| | |||||| | ||||  ||||||||| ||||||||||| |||||||||| || |||||||||| ||||||    
T  46673512 cttatttttggttttcaatttggtcccctaacaataaagtgtttcaatttggtcccataaatcttatg-cgtttactatgttggtc 46673596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 7146799 - 7146886
Alignment:
Q  13 taacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||||||  | ||| | |||||| | |||| |||||||||| ||||||||||| | |||||||| |||| |||||| ||||||||    
T  7146799 taacttattttctgttttcaatttggtcccctaactataaagtgtttcaatttggtc-cttaaatcttatgtcatttactgttttggtc 7146886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 8439783 - 8439847
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    ||||||||||||||  |||| |||||||| |  ||||| |||| ||||||||||||||| |||||    
T  8439783 cttaacttatttttgaatttcattttggtcccttaattgtaaactgtctcaatttggtcccataa 8439847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 33228856 - 33228928
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    ||||||| ||||||||||||||  |||| |||||||| |  ||||| |||| | ||||||||||||| |||||    
T  33228856 tttggtcccttaacttatttttgaatttcattttggtcccttaattttaaactatctcaatttggtcccataa 33228928  T

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Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 37373543 - 37373615
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    ||||||| ||||||||||||||  |||| |||||||| |  ||| | |||| |||||||||||| ||||||||    
T  37373543 tttggtcccttaacttatttttgaatttcattttggtaccttaactttaaactgtctcaatttgatctcataa 37373615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 59 - 239
Target Start/End: Original strand, 25569834 - 25570011
Alignment:
Q  59 tcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattg 158  Q
    ||||||||||| ||||| |||||   |||||| | |||||||  | |  |||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  25569834 tcaatttggtcacataagtcttcctccgtttattgttttggttttttatgttagttttttaatgtatattattcttgatatcattttaaccacttgattg 25569933  T
Q  159 caggtctatggtaactaagagtgaaccatcaacacttgannnnnnnnacagttttcttcatcttctctcttcatcatacta 239  Q
    || |||||| |||  |||||||||||||||| |||||||        | ||||||||||||||||||||||||||||||||    
T  25569934 catgtctatagtatttaagagtgaaccatcagcacttga---tttttatagttttcttcatcttctctcttcatcatacta 25570011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 12852895 - 12853003
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| ||||||||| |||| ||||| |||||||| | |||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  12852895 tttggtcccttaacttacttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttctatcgtttactattttggtca 12852994  T
Q  103 tcttcgtta 111  Q
    ||| |||||    
T  12852995 tctccgtta 12853003  T

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Target: chr2; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 6706935 - 6707096
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||| ||||| |||||||| | |||| |||||||||||||||||||||  ||||||||||||  |||||||||||||||||     
T  6706935 tttggtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggttccataaatcttcttccgtttactattttggtcc 6707034  T
Q  103 tcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 164  Q
     || ||||| |||||||||||  | || |  |||||| |||| ||||| | |||||||||||    
T  6707035 cctccgttagttttttaatgtcaaatatttatgatataatttcaaccattagattgcaggtc 6707096  T

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Target: chr2; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 6209162 - 6209057
Alignment:
Q  12 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 111  Q
    ||||||||||||| ||||| ||||||||  ||||| |||||||||||| ||||||||| ||||| |||| |||||||||||||||||||| |||||||||    
T  6209162 ttaacttatttttggatttcattttggtcatctaactataaagtgtcttaatttggtcccataattctt-tgtcgtttactattttggtcttcttcgtta 6209064  T
Q  112 atttttt 118  Q
     ||||||    
T  6209063 gtttttt 6209057  T

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Target: chr2; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 23178991 - 23178869
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||||| ||| | |||||| | |||| |||||| ||| | || |||||| ||||||||||| |||||||| |||||||||    
T  23178991 catttggtcccttaacttatttttagttttcactttggtcccctaactataaactgttttaaattggtcccataaatcttcagtcgtttattattttggt 23178892  T
Q  101 catcttcgttaattttttaatgt 123  Q
    ||||| ||||| |||||||||||    
T  23178891 catctccgttagttttttaatgt 23178869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 23590248 - 23590126
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||||| ||| | |||||| | |||| |||||| ||| | || |||||| ||||||||||| |||||||| |||||||||    
T  23590248 catttggtcccttaacttatttttagttttcactttggtcccctaactataaactgttttaaattggtcccataaatcttcagtcgtttattattttggt 23590149  T
Q  101 catcttcgttaattttttaatgt 123  Q
    ||||| ||||| |||||||||||    
T  23590148 catctccgttagttttttaatgt 23590126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 1625074 - 1624968
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 110  Q
    |||||||||||||| ||||| |||||| | |||||| ||||||||||||||||||||||  ||||||||| || | ||||||||||||||| ||| ||||    
T  1625074 cttaacttatttttggatttcattttgat-ctctaactataaagtgtctcaatttggtcctataaatcttatgccatttactattttggtcttctccgtt 1624976  T
Q  111 aatttttt 118  Q
    ||||||||    
T  1624975 aatttttt 1624968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 42029067 - 42028957
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||| ||||||| | ||| ||||||||  ||||| ||||||||||||| |||||||| ||||| |||||||||| |||||||||||||    
T  42029067 catttggtcccttaacgtatttttggttttcattttggtcatctaactataaagtgtctcgatttggtcccataattcttctgtcgcttactattttggt 42028968  T
Q  101 catcttcgtta 111  Q
    | ||| |||||    
T  42028967 cttctccgtta 42028957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 23177680 - 23177797
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctc-taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttgg 99  Q
    ||||||||| ||||| |||||||| | ||| |||||||| | | ||| |||||||||||||||||||||| ||||||||||||| ||||||| |||||||    
T  23177680 catttggtcccttaatttatttttggttttcattttggtccccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttaccattttgg 23177779  T
Q  100 tcatcttcgttaattttt 117  Q
    || ||| ||||| |||||    
T  23177780 tcctctccgttagttttt 23177797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 23588937 - 23589054
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctc-taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttgg 99  Q
    ||||||||| ||||| |||||||| | ||| |||||||| | | ||| |||||||||||||||||||||| ||||||||||||| ||||||| |||||||    
T  23588937 catttggtcccttaatttatttttggttttcattttggtccccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttaccattttgg 23589036  T
Q  100 tcatcttcgttaattttt 117  Q
    || ||| ||||| |||||    
T  23589037 tcctctccgttagttttt 23589054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 12854211 - 12854131
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctg 83  Q
    ||||||| |||||||||||||||||||| |||||||| |  ||| |||||||||||||||||||||| |||||||||||||    
T  12854211 tttggtcccttaacttatttttagatttcattttggtcccttaactataaagtgtctcaatttggtcccataaatcttctg 12854131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 15650458 - 15650558
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 110  Q
    ||||||||||||||   | ||| |||||| | |||| ||||||||||||||||||||| || |||||||| |||||||||||||||||||||||| ||||    
T  15650458 cttaacttatttttcattgttaatttggtcccctaactataaagtgtctcaatttggtatcttaaatcttatgtcgtttactattttggtcatctccgtt 15650557  T
Q  111 a 111  Q
    |    
T  15650558 a 15650558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 164
Target Start/End: Complemental strand, 40174821 - 40174711
Alignment:
Q  53 agtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccact 152  Q
    ||||| ||||||||||| |||||||||||||| |||||||||||||||||||| ||||| ||||||||||| || || | || |||| |||| ||||| |    
T  40174821 agtgtttcaatttggtcccataaatcttctgttgtttactattttggtcatctccgttagttttttaatgt-taatattttttatatgatttcaaccatt 40174723  T
Q  153 tgattgcaggtc 164  Q
     |||||||||||    
T  40174722 cgattgcaggtc 40174711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 21012174 - 21012064
Alignment:
Q  16 cttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattt 115  Q
    ||||||||| | ||| |||||| | | |||| |||||||||| ||||||||||| |  |||||||| ||||||||||||||||||||||| ||||| |||    
T  21012174 cttattttttgttttcattttgatcccctaactataaagtgtttcaatttggtccctcaaatcttccgtcgtttactattttggtcatctccgttagttt 21012075  T
Q  116 tttaatgtata 126  Q
    || ||||||||    
T  21012074 ttgaatgtata 21012064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 10477351 - 10477419
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggt-tctctaattataaagtgtctcaatttggtctc 71  Q
    |||||||||||||||||||||| ||||| |||||||| ||| ||||||||||||||||||||||||||||    
T  10477351 tttggtctcttaacttatttttggatttcattttggtctct-taattataaagtgtctcaatttggtctc 10477419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 14509263 - 14509332
Alignment:
Q  48 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 117  Q
    |||||||||| | |||| |||| ||||||||||||||||||||||||||||||| ||| |||||||||||    
T  14509263 tataaagtgttttaattcggtcccataaatcttctgtcgtttactattttggtcctctccgttaattttt 14509332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 7036973 - 7037089
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    |||||||||  ||||||||||||| ||||| | ||| || |  ||| |||||||||| ||||||||||| ||||| ||||||| ||||||| ||||||||    
T  7036973 catttggtcctttaacttatttttggatttcactttagtcccttaactataaagtgtttcaatttggtcccataagtcttctgccgtttaccattttggt 7037072  T
Q  101 catcttcgttaattttt 117  Q
    ||| | |||| ||||||    
T  7037073 catttccgtttattttt 7037089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 37869147 - 37869040
Alignment:
Q  3 tttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||||| |||||||||||||| |||||| | |||||| |  ||| |||||||||||||||||| ||||||||| |||||||||||||||  ||||||||    
T  37869147 tttggtcccttaacttattttt-gattttcaatttggtcccttaactataaagtgtctcaatttagtctcataagtcttctgtcgtttacctttttggtc 37869049  T
Q  102 atcttcgtt 110  Q
     ||| ||||    
T  37869048 ttctccgtt 37869040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 42027202 - 42027300
Alignment:
Q  3 tttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||||| |||||||||||||| |||||| |||||||| |||||| || ||| ||||||||||||||| ||||||| |||||  |||||||| |||||||    
T  42027202 tttggtcccttaacttattttt-gattttcattttggtcctctaactacaaaatgtctcaatttggtcccataaattttctgctgtttactactttggtc 42027300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 42246600 - 42246715
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||| ||||| | ||| |||||| | | ||||||||||||||| |||||||| || ||||| |||| |  |||||||||||||||||     
T  42246600 tttggtcccttaacttgtttttggttttcattttgatcccctaattataaagtgtttcaatttgatcccataactcttttaccgtttactattttggtcc 42246699  T
Q  103 tcttcgttaatttttt 118  Q
    | ||||||| ||||||    
T  42246700 ttttcgttagtttttt 42246715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 3254865 - 3254931
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||  ||||| |||||||||| ||||||||| |||||||||||||||||    
T  3254865 tttggtcccttaacttattttcggatttcattttggttccctaattatagagtgtctcaatttggtc 3254931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 4829482 - 4829572
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||||||||| | ||| | ||| || |  ||| |||||| |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  4829482 cttaacttatttttcgttttcactttagtcccttaactataaaatgtctcaatttgatctcataaatcttatgtcgtttactattttggtc 4829572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 7038441 - 7038367
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    ||||||||| |||||||||||||| ||||| |||||||| |  ||| |||||||||||||||||||||| |||||    
T  7038441 catttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataa 7038367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 12958424 - 12958545
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    |||||||| ||||||||||||||| | ||||| |||| | | |||| |||||||||||||||||||||| ||||||| ||||  | ||||  ||||||||    
T  12958424 catttggt-tcttaacttatttttggtttttaatttgatcccctaactataaagtgtctcaatttggtcccataaattttcttccatttatcattttggt 12958522  T
Q  101 catcttcgttaattttttaatgt 123  Q
    ||| | ||||  |||||||||||    
T  12958523 catttccgtttgttttttaatgt 12958545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 33837862 - 33837800
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 65  Q
    ||||||| ||||||||||||| ||||||||||||||| | |||| ||||||||||||||||||    
T  33837862 tttggtcccttaacttattttcagattttattttggtcccctaactataaagtgtctcaattt 33837800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 37867763 - 37867885
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | ||| | |||| | | |||| |||||||||||||||||||||| || |||| |||| |||||||  ||||||||    
T  37867763 catttggtcccttaacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccacaaattttctttcgtttatcattttggt 37867862  T
Q  101 catcttcgttaattttttaatgt 123  Q
    ||| |  |||  |||||||||||    
T  37867863 catgtctgtttgttttttaatgt 37867885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 4630183 - 4630123
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 71  Q
    ||||||||||||| |||||| |||||||| | |||| ||||||||||||||||||||||||    
T  4630183 cttaacttattttcagatttcattttggtcccctaactataaagtgtctcaatttggtctc 4630123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 14510567 - 14510507
Alignment:
Q  52 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaa 112  Q
    ||||||||||||||||||  |||| ||||||| ||||||||||||| ||||||||||||||    
T  14510567 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcatcttcgttaa 14510507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 34039270 - 34039370
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||| || |||||||||||||||   ||  |||||| |||||||| |||||||| ||| ||||||||||||||| ||||| |||| || ||||||||||    
T  34039270 catttagtttcttaacttattttttatttccattttgcttctctaactataaagtatcttaatttggtctcataattcttcggtcgcttgctattttggt 34039369  T
Q  101 c 101  Q
    |    
T  34039370 c 34039370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 2583643 - 2583576
Alignment:
Q  13 taacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatctt 80  Q
    |||||||||||| | ||||| ||| || | |||| |||||||||||||||||||||||||||||||||    
T  2583643 taacttatttttggtttttaattttgtcccctaactataaagtgtctcaatttggtctcataaatctt 2583576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 123
Target Start/End: Complemental strand, 3533684 - 3533613
Alignment:
Q  52 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgt 123  Q
    |||||| |||||||||||||||||||||| ||||||||||||||| | |||| | ||||| | |||||||||    
T  3533684 aagtgtgtcaatttggtctcataaatcttttgtcgtttactatttcgatcatttccgttagtattttaatgt 3533613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 7490271 - 7490204
Alignment:
Q  34 tttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||| || |||||||||| ||||||||||||||| |||||||||| | | ||||||||||||||||    
T  7490271 tttggtcctttaattataaaatgtctcaatttggtcccataaatcttttattgtttactattttggtc 7490204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 111
Target Start/End: Original strand, 2581822 - 2581920
Alignment:
Q  13 taacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 111  Q
    |||||||||||| | ||| | |||| | | |||| |||||||||||||||||||||| ||||||||||  | |||||||||| |||||| ||| |||||    
T  2581822 taacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccataaatcttacgccgtttactatcttggtcctctccgtta 2581920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 5564068 - 5564134
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| ||||||||||||||  |||| |||||||| |  ||||||||||||||||||||||||||    
T  5564068 tttggtcccttaacttatttttgaatttcattttggtcccttaattataaagtgtctcaatttggtc 5564134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 5565252 - 5565186
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| ||||||||||||||  |||| |||||||| |  ||||||||||||||||||||||||||    
T  5565252 tttggtcccttaacttatttttgaatttcattttggtcccttaattataaagtgtctcaatttggtc 5565186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 42368415 - 42368343
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    |||||||| |||||||||||||| ||||| |||||||| | |||| ||||||||||||| |||||||| |||||    
T  42368415 atttggtc-cttaacttatttttggatttcattttggtcccctaactataaagtgtctcgatttggtcccataa 42368343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 2305557 - 2305657
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 110  Q
    |||||||||||||| ||||| |||||| | | |||| |||||||||||||||||||||| | ||  ||||||| ||||  || |||||||| ||| ||||    
T  2305557 cttaacttatttttggatttcattttgatcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcctctccgtt 2305656  T
Q  111 a 111  Q
    |    
T  2305657 a 2305657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 4628899 - 4628991
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcat 103  Q
    |||||||||||||| |||||||||||||| |||||  |||||||| |||||||||| || ||||  |||| || ||||  || ||||||||||    
T  4628899 cttaacttatttttggattttattttggtcctctatatataaagtatctcaatttgatcccatatgtcttttgccgttacctcttttggtcat 4628991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 11386642 - 11386730
Alignment:
Q  12 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||||||||| ||||| |||||| |  ||| |||||||||| |||||||| || |||||| |||||  ||||||| ||||||||    
T  11386642 ttaacttatttttagtttttaatttggtcccttaactataaagtgtttcaatttgatcccataaaccttctaccgtttaccattttggt 11386730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 28109977 - 28109862
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctc-taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    |||||||| |||||||||||||| | ||| | |||||| ||| |||  ||||||| ||||||||||||| ||||| | |||||| |||||| ||||||||    
T  28109977 atttggtcccttaacttatttttcgttttcaatttggt-ctcataacgataaagtatctcaatttggtcccataacttttctgtagtttaccattttggt 28109879  T
Q  101 catcttcgttaattttt 117  Q
    | ||| ||||| |||||    
T  28109878 cctctccgttatttttt 28109862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 3666376 - 3666309
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    |||||||| |||||||||||||  ||||| |||||||| |  ||| ||||||||||||||||||||||    
T  3666376 atttggtcccttaacttattttcggatttcattttggtcccataactataaagtgtctcaatttggtc 3666309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 3665233 - 3665299
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||  ||||| |||||||| |||||| |||||| ||| |||||||||||    
T  3665233 tttggtcccttaacttattttcggatttcattttggtcctctaactataaaatgtttcaatttggtc 3665299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 15268390 - 15268456
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    |||||||||||||||||||||| ||||| |||||| | |  ||| |||||| |||||||||||||||    
T  15268390 tttggtctcttaacttatttttggatttgattttgatcccttaactataaaatgtctcaatttggtc 15268456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 29424719 - 29424621
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||||| |||||||||||||| | |||||  ||||| | |||| |||||||||| ||||||||||| | | ||| ||||| |||||| | ||||||||    
T  29424719 tttggtcccttaacttatttttggtttttacattggtcccctaactataaagtgtttcaatttggtcccttgaatattctgccgtttattgttttggtc 29424621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 33836786 - 33836844
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  33836786 cttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 33836844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 3532244 - 3532305
Alignment:
Q  44 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatct 105  Q
    ||||||| |||||| ||||||||||| ||||| |||| |||| ||||||||||| |||||||    
T  3532244 taattattaagtgtgtcaatttggtcacataagtcttttgtcatttactattttagtcatct 3532305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 10367256 - 10367336
Alignment:
Q  11 cttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 91  Q
    |||||||||||||| |||||| | |||||||   ||| |||||||||||||||||| ||||||||| ||||||| |||||||    
T  10367256 cttaacttattttt-gattttcaatttggtttcttaactataaagtgtctcaatttagtctcataagtcttctgccgtttac 10367336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 10368494 - 10368374
Alignment:
Q  1 catttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttgg 99  Q
    ||||||||| ||||| |||||||| |||||| | |||| | | |||| ||||||||||||||||||| || ||||||| ||||  ||||||  |||||||    
T  10368494 catttggtcccttaatttattttt-gattttcaatttgatcccctaactataaagtgtctcaatttgatcccataaattttcttccgtttatcattttgg 10368396  T
Q  100 tcatcttcgttaattttttaat 121  Q
    |||| | ||||  |||||||||    
T  10368395 tcatgtccgtttgttttttaat 10368374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 3255977 - 3255917
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 71  Q
    |||||||||||||  ||||| |||||||| | |||| |||||||||| |||||||||||||    
T  3255977 cttaacttattttcggatttcattttggtcccctaactataaagtgtttcaatttggtctc 3255917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 27264680 - 27264608
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    ||||||||||||||||||||||  |||| |||||||| |  ||| | |||| ||||||||||||||| |||||    
T  27264680 tttggtctcttaacttatttttgaatttcattttggtcccttaactttaaattgtctcaatttggtcccataa 27264608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 35799529 - 35799593
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    |||||||||||||| | ||| | ||| || | |||| ||||||||||||||||||||||||||||    
T  35799529 cttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtctcataa 35799593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 41312509 - 41312577
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 71  Q
    |||||||  ||||||||||||  ||||| |||||| | |||||| |||||||| |||||||||||||||    
T  41312509 tttggtccattaacttattttcggatttcattttgttcctctaactataaagtatctcaatttggtctc 41312577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 41313374 - 41313311
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 66  Q
    ||||||| |||||||||||||   ||||||||||||| | |||| |||||||||||| ||||||    
T  41313374 tttggtcccttaacttattttcgaattttattttggtcccctaactataaagtgtctgaatttg 41313311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 2306767 - 2306702
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| | ||||||||||||||||||||    
T  2306767 tttggtcccttaacttattttg-gatttcattttggtcccctaactgtaaagtgtctcaatttggtc 2306702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 14482198 - 14482132
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| ||||||||||||||  |||| ||||||||||  ||| | ||||| ||||||||||||||    
T  14482198 tttggtcccttaacttatttttgaatttcattttggttccttaactttaaagcgtctcaatttggtc 14482132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 17179069 - 17179135
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| ||||||||||||||  |||||| |||||| | |||| | |||| |||||||||||||||    
T  17179069 tttggtcccttaacttatttttgaattttaatttggtcccctaactttaaactgtctcaatttggtc 17179135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 118
Target Start/End: Complemental strand, 35801107 - 35801037
Alignment:
Q  48 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaatttttt 118  Q
    |||||||||| ||||||||||| | ||| ||||||| | ||||| | ||||||| ||| ||||||||||||    
T  35801107 tataaagtgtttcaatttggtcccctaactcttctgccatttaccactttggtcctctccgttaatttttt 35801037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 14573915 - 14573854
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatt 64  Q
    ||||||| |||||| ||||||| ||||| |||||||| | |||| ||||||||||| |||||    
T  14573915 tttggtcccttaacatatttttggatttcattttggtcccctaactataaagtgtcacaatt 14573854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 15850721 - 15850652
Alignment:
Q  48 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 117  Q
    |||||| ||| ||||||||||||||||| |||||||  |||  |||||||||||  |||||||| |||||    
T  15850721 tataaaatgtttcaatttggtctcataactcttctgctgttacctattttggtccacttcgttagttttt 15850652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 41796061 - 41795993
Alignment:
Q  1 catttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||| ||| |||||||||||||| |||||| |||||| | | |||| ||||||||||||||||||||||    
T  41796061 catttagtcccttaacttattttt-gattttcattttgatcccctaactataaagtgtctcaatttggtc 41795993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 151
Target Start/End: Complemental strand, 8538643 - 8538583
Alignment:
Q  91 ctattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccac 151  Q
    ||||||||||||||| ||||||||||||||||  || || | ||||||| |||| ||||||    
T  8538643 ctattttggtcatctccgttaattttttaatgactaatatttttgatataatttcaaccac 8538583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 12959804 - 12959724
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 91  Q
    ||||||||||||||   ||||| |||||| |  |||  ||||||||||||||||| |||  |||||||||||| |||||||    
T  12959804 cttaacttatttttgatttttaatttggtcccttaacaataaagtgtctcaatttagtccgataaatcttctgccgtttac 12959724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 15816773 - 15816701
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    ||||||||||||||||||||||  |||| ||||| || |  ||| | |||| ||||||||||||||| |||||    
T  15816773 tttggtctcttaacttatttttgaatttcattttcgtcccttaactttaaactgtctcaatttggtcccataa 15816701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 43015548 - 43015620
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    ||||||| ||||||||||||||  |||| |||||||| |  ||| | |||| ||||||||||||||| |||||    
T  43015548 tttggtcccttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtcccataa 43015620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 43101901 - 43102010
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||| |    
T  43101901 catttggtcccttaacttatttttggttttcattttggtcctctaattataaagtgtctcaatttggtcccataattcttctgtcgcttactattttgat 43102000  T
Q  101 catcttcgtt 110  Q
    ||||| ||||    
T  43102001 catctccgtt 43102010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 113
Target Start/End: Complemental strand, 47808205 - 47808103
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 110  Q
    |||||||||||||| ||||| | ||||||||  ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||    
T  47808205 cttaacttatttttggatttcactttggttccttaactataaagtgtctcaatttggtctcataaatcttctgtcgtttgctattttggtcctctccgtt 47808106  T
Q  111 aat 113  Q
    |||    
T  47808105 aat 47808103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 54654075 - 54653965
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| ||||| |||||||| |  ||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  54654075 catttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttctgtcgtttactattttggt 54653976  T
Q  101 catcttcgtta 111  Q
    | ||| |||||    
T  54653975 cctctccgtta 54653965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 11219439 - 11219547
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    |||||||  ||||||||||||| ||||| |||||||| | |||| |||||||||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  11219439 tttggtccgttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtctcatgagtcttctgccgtttactattttggtca 11219538  T
Q  103 tcttcgtta 111  Q
    ||| |||||    
T  11219539 tctccgtta 11219547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 11220765 - 11220645
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| ||||||||||||||  |||| |||||||| | |||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||     
T  11220765 tttggtcccttaacttatttttgaatttcattttggtcccctaactataaagtgtctcaatttggtcctataaatcttctgtcgtttactattttggtcc 11220666  T
Q  103 tcttcgttaattttttaatgt 123  Q
     || ||||  |||||||||||    
T  11220665 cctccgtttgttttttaatgt 11220645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 29536723 - 29536831
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| ||| |||||||||| ||||| |||||| | |||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||     
T  29536723 tttggtcccttgacttatttttggatttcattttgatcctctaactataaagtgtctcaatttggtcccataaatcttctttcgtttactattttggtcc 29536822  T
Q  103 tcttcgtta 111  Q
    ||| |||||    
T  29536823 tctccgtta 29536831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 47855445 - 47855330
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||| ||||| |||||||| |  ||| ||||||||||||||||||||||  |||||||||||| |||||||||||||||||     
T  47855445 tttggtcccttaacttatttttggatttcattttggtccgttaactataaagtgtctcaatttggtcctataaatcttctgccgtttactattttggtcc 47855346  T
Q  103 tcttcgttaatttttt 118  Q
    ||| ||||| ||||||    
T  47855345 tctccgttattttttt 47855330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 51825730 - 51825628
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| ||||| | |||||| |  ||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  51825730 catttggtcccttaacttatttttggatttcactttggtcccttaactataaagtgtttcaatttggtcccataaatcttctgtcgtttactattttggt 51825631  T
Q  101 cat 103  Q
    |||    
T  51825630 cat 51825628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 8372723 - 8372562
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||| | ||| |||||||| | |||| |||||||||||||||||||||| ||||||||  |    |||||||||||||||||    
T  8372723 tttggtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataaatccacaacagtttactattttggtca 8372624  T
Q  103 tcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 164  Q
     || ||||| ||||||||||| || || | ||||||| |||| ||||| | |||||||||||    
T  8372623 cctccgttagttttttaatgtttaatatttttgatatgatttcaaccattcgattgcaggtc 8372562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 3 - 193
Target Start/End: Original strand, 48252942 - 48253132
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| ||||||||||| || | |||||||||||| | |||| |||||||||||||||||||||| ||||| |||||   ||||||||| | | ||||    
T  48252942 tttggtcccttaacttattctttgtttttattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatgtagtca 48253041  T
Q  103 tcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatcaacac 193  Q
    ||| ||||| ||||||||||| ||    | ||||| | |||||||||| ||||||||| ||| || ||| |||| |||||||  |||||||    
T  48253042 tctccgttagttttttaatgtctaaattttttgatgtgattttaaccatttgattgcatgtccattgtatctaatagtgaactgtcaacac 48253132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 6 - 118
Target Start/End: Complemental strand, 13078055 - 13077943
Alignment:
Q  6 ggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatc 104  Q
    ||||||||||||||||||| |||||| | |||||| |||||| |||||| ||||| ||||||||| |||||||||| |||||||||||||||||| | ||    
T  13078055 ggtctcttaacttattttt-gattttcaatttggtcctctaagtataaaatgtcttaatttggtcccataaatcttatgtcgtttactattttggacctc 13077957  T
Q  105 ttcgttaatttttt 118  Q
    ||||||||| ||||    
T  13077956 ttcgttaatatttt 13077943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 25585941 - 25585820
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||| ||||| ||||||||   ||| | | |||| |||||| ||| ||  |||||||||||||||||||||||||||||||||||||||||| |||    
T  25585941 atttggtcccttaatttattttttattttcactctggtcctctaactattaaacgtctcaatttggtctcataaatcttctgtcgtttactattttagtc 25585842  T
Q  102 atcttcgttaattttttaatgt 123  Q
    |||| ||||| |||||||||||    
T  25585841 atctccgttagttttttaatgt 25585820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 26799015 - 26798899
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    |||||||||||||||||||||||| | |||||||||||| | |||| |||||| ||||||||||||||| ||||| |||||   ||||||| ||||||||    
T  26799015 catttggtctcttaacttatttttggtttttattttggtcccctaactataaaatgtctcaatttggtcccataattcttcctccgtttaccattttggt 26798916  T
Q  101 catcttcgttaattttt 117  Q
    | ||| ||||| |||||    
T  26798915 cctctccgttagttttt 26798899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 164
Target Start/End: Complemental strand, 32980550 - 32980398
Alignment:
Q  12 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 111  Q
    ||||||||||||  | ||| | |||||| | |||| || |||||||||||||||||||  |||||||||||| ||||||||||||||||||||| |||||    
T  32980550 ttaacttattttctgttttcaatttggtcccctaactacaaagtgtctcaatttggtcctataaatcttctgccgtttactattttggtcatctccgtta 32980451  T
Q  112 attttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 164  Q
     ||||||||| | ||  | | ||||||| |||| ||||| | |||||||||||    
T  32980450 gttttttaatttctaacatttttgatatgatttcaaccattcgattgcaggtc 32980398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 7820399 - 7820514
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| ||||||||||||||  |||| |||||||| |||||| |||||||||| ||||||||| | ||||||| || ||||||||||| ||||||||     
T  7820399 tttggtcccttaacttatttttgaatttcattttggtcctctaactataaagtgtttcaatttggacccataaattttatgtcgtttactgttttggtcc 7820498  T
Q  103 tcttcgttaatttttt 118  Q
    ||| ||||| ||||||    
T  7820499 tctccgttagtttttt 7820514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 8371227 - 8371343
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    |||||| || |||||||||||||| | ||| |||||||| | |||| |||||| ||||||||||||||  |||||||||||||  |||||||||||||||    
T  8371227 catttgatcccttaacttattttttgttttcattttggtcccctaactataaaatgtctcaatttggttccataaatcttctgcagtttactattttggt 8371326  T
Q  101 catcttcgttaattttt 117  Q
    | ||| ||||| |||||    
T  8371327 cctctccgttagttttt 8371343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 53808325 - 53808429
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||  | ||| | ||||||   |||| |||||||||||||||| ||||| |||||||||| |||||||||||||||||||    
T  53808325 catttggtcccttaacttattttcggttttgaatttggtctcctaactataaagtgtctcaatctggtcccataaatcttatgtcgtttactattttggt 53808424  T
Q  101 catct 105  Q
    |||||    
T  53808425 catct 53808429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 42632713 - 42632823
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| ||||||||| |||| | ||| | |||||| | |||| ||||||||||||||||||| || |||||||||| |||||||||||||||| ||    
T  42632713 catttggtcccttaacttacttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatcttatgtcgtttactattttagt 42632812  T
Q  101 catcttcgtta 111  Q
    | ||| |||||    
T  42632813 cctctccgtta 42632823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 42633995 - 42633895
Alignment:
Q  1 catttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttgg 99  Q
    ||||||||| |||||||||||||| |||||| | |||||| | |||| |||| ||||||||||||||||| |||||||||| ||||||||| ||||||||    
T  42633995 catttggtcccttaacttattttt-gattttcaatttggtcccctaactatagagtgtctcaatttggtcccataaatcttatgtcgtttattattttgg 42633897  T
Q  100 tc 101  Q
    ||    
T  42633896 tc 42633895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 39190823 - 39190763
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 71  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||    
T  39190823 cttaacttatttttagattttattttggtcccctaattataaagtgtctcaatttagtctc 39190763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 41386139 - 41386247
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||||||||||||||  ||||||||||  | |||||||||||||||||     
T  41386139 tttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggttccataaatcttacgacgtttactattttggtcc 41386238  T
Q  103 tcttcgtta 111  Q
    ||| |||||    
T  41386239 tctccgtta 41386247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 53049144 - 53049036
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||  |||||||||||||| | |||| |||||||||||||||||||||| | ||  ||||||||||||  || ||||||||     
T  53049144 tttggtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcc 53049045  T
Q  103 tcttcgtta 111  Q
    ||| |||||    
T  53049044 tctccgtta 53049036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 160
Target Start/End: Complemental strand, 19253099 - 19252952
Alignment:
Q  13 taacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaa 112  Q
    |||||||||||| | ||| | |||||| | ||||||||||| |||||||||||| || ||||||| ||||| ||||||| ||||||||| | | |||| |    
T  19253099 taacttatttttggttttcaatttggtcccctaattataaaatgtctcaatttgatcccataaatattctgccgtttaccattttggtcctgtccgttta 19253000  T
Q  113 ttttttaatgtatattaatcttgatatcattttaaccacttgattgca 160  Q
    ||||||||||| || || | || ||||  |||| |||| |||||||||    
T  19252999 ttttttaatgtctaatattttttatattgttttgaccatttgattgca 19252952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 43345373 - 43345492
Alignment:
Q  48 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaa 147  Q
    |||||| ||| ||||||||||| |||||||||||| |||||||| ||||||||  ||| ||||| ||||||||||| || || | ||||||| |||  ||    
T  43345373 tataaaatgtttcaatttggtcccataaatcttctctcgtttaccattttggttttctccgttagttttttaatgtttaatatttttgatatgattccaa 43345472  T
Q  148 ccacttgattgcaggtctat 167  Q
    ||| | ||||||||||||||    
T  43345473 ccattcgattgcaggtctat 43345492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 10987762 - 10987645
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    |||||| || |||||||||||||| | ||| |||||||| | |||| |||||||||||||||||||||| ||||||| || || |||||  |||||||||    
T  10987762 catttgatcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataaattttatgccgttttttattttggt 10987663  T
Q  101 catcttcgttaatttttt 118  Q
    | |||  |||||| ||||    
T  10987662 cctctctgttaatatttt 10987645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 23559869 - 23559942
Alignment:
Q  44 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 117  Q
    ||||||| ||||||||||||||| || ||||| ||||||||||||||||||||||||| ||| ||||| |||||    
T  23559869 taattattaagtgtctcaatttgatcccataattcttctgtcgtttactattttggtcctctccgttagttttt 23559942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 49122111 - 49122011
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctct-aattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttgg 99  Q
    |||||||||  ||||||||||||| | ||| |||||||| |||| || |||||||||||||||||||||||||||| | ||||| ||||||| |||||||    
T  49122111 catttggtcctttaacttatttttggttttcattttggt-ctcttaactataaagtgtctcaatttggtctcataagttttctgccgtttaccattttgg 49122013  T
Q  100 tc 101  Q
    ||    
T  49122012 tc 49122011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 51401456 - 51401371
Alignment:
Q  5 tggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgttta 90  Q
    ||||| |||||||||||||| | ||| | |||||| | |||| |||||||||||||||||||||| ||||||||||||| ||||||    
T  51401456 tggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgttta 51401371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 32974330 - 32974222
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| |||||||||||||||||||||| | ||  ||||||| ||||  || |||||||||    
T  32974330 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtca 32974231  T
Q  103 tcttcgtta 111  Q
    ||| |||||    
T  32974230 tctccgtta 32974222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 32979097 - 32979177
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctg 83  Q
    ||||||| ||||||| ||||||| |||| |||||||| |||||| ||||||||||||||||||| || ||||||| |||||    
T  32979097 tttggtcccttaactaatttttaaatttcattttggtcctctaactataaagtgtctcaatttgatcccataaattttctg 32979177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 47806835 - 47806934
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 110  Q
    |||||||||||||| ||||| |||||||| |  ||||||||||||||||||||||| ||  ||||||||||||  |||||| ||||||||| ||| ||||    
T  47806835 cttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttgatcctataaatcttctgctgtttac-attttggtcctctccgtt 47806933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 53047906 - 53048014
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| |||||||||||||||||||||| | ||  ||||||||||||  || ||||||||     
T  53047906 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcc 53048005  T
Q  103 tcttcgtta 111  Q
    ||| |||||    
T  53048006 tctccgtta 53048014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 2124063 - 2124146
Alignment:
Q  28 ttttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 111  Q
    ||||| |||||||| |||| |||||| | ||| ||||||||| |||||||||| || ||||||||||||||||||||| |||||    
T  2124063 ttttaatttggttccctaactataaaatatcttaatttggtcccataaatcttatgccgtttactattttggtcatctccgtta 2124146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 39287480 - 39287587
Alignment:
Q  4 ttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcat 103  Q
    |||||| |||||||||||||  ||||| |||||||| |||||| |||||||||||||||||||||| | ||  | ||||||||||  || |||||||| |    
T  39287480 ttggtcccttaacttattttcggatttcattttggtcctctaactataaagtgtctcaatttggtcccttatgttttctgtcgttacctcttttggtcct 39287579  T
Q  104 cttcgtta 111  Q
    || |||||    
T  39287580 ctccgtta 39287587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 51824133 - 51824243
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctct-aattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttgg 99  Q
    |||||||||||||||||||||||||| ||||| |||| | |||| || | ||||||||||||||||| | |||||||||||||  | ||||| ||||| |    
T  51824133 catttggtctcttaacttatttttagtttttactttgat-ctcttaaatttaaagtgtctcaatttgatttcataaatcttctaccatttaccatttttg 51824231  T
Q  100 tcatcttcgtta 111  Q
    |||||| |||||    
T  51824232 tcatctgcgtta 51824243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 7822093 - 7822027
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| ||||||||| |||| ||||||||||||||   |||||||||||||||||||||||||||    
T  7822093 tttggtcccttaacttaattttggattttattttggtctcctaattataaagtgtctcaatttggtc 7822027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 41387542 - 41387432
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | ||| | |||||| | |||| |||||| ||||||||||||||| |||||| |||    ||||||||||||||||    
T  41387542 catttggtcccttaacttatttttggttttcaatttggtcccctaactataaaatgtctcaatttggtcccataaaccttacaccgtttactattttggt 41387443  T
Q  101 catcttcgtta 111  Q
    | ||| |||||    
T  41387442 cctctccgtta 41387432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 53809602 - 53809436
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||| ||| |||||||||||||| | ||| |||||||| | |||| | ||||  |||||||||| ||||||||| | |||   ||||||||| | | ||    
T  53809602 catttagtcccttaacttattttttgttttcattttggtcccctaactttaaaacgtctcaattttgtctcataagttttcctccgtttactaatgttgt 53809503  T
Q  101 catcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctat 167  Q
    ||||| ||||| ||||||||||| ||    | ||||||| |||||||||| ||||||||| ||||||    
T  53809502 catctccgttagttttttaatgtctaaattttttgatataattttaaccatttgattgcatgtctat 53809436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 25583121 - 25583237
Alignment:
Q  1 catttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttgg 99  Q
    ||||| ||| |||||||||||||| |||||| | |||||| | |||| ||| ||  |||||||||||||| ||||| ||||||| |||||||||||||||    
T  25583121 catttagtcccttaacttattttt-gattttcactttggtcccctaactattaaacgtctcaatttggtcccataagtcttctgccgtttactattttgg 25583219  T
Q  100 tcatcttcgttaattttt 117  Q
    || |||  ||||||||||    
T  25583220 tcctctctgttaattttt 25583237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 47767048 - 47766876
Alignment:
Q  12 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 111  Q
    ||||||||||||| | ||| |||||||| | |||| |||||||||||||||||||||| ||||| |||||   ||||||||| | | ||| ||| |||||    
T  47767048 ttaacttatttttggttttcattttggtcc-ctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatgtcgtcctctgcgtta 47766950  T
Q  112 attttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaacc 185  Q
     ||||||||||| ||    | || || | |||||||||| ||||||||| ||| || ||| |||| ||||||||    
T  47766949 gttttttaatgtctaaatttttttatgtgattttaaccatttgattgcatgtccattgtatctaatagtgaacc 47766876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 48825821 - 48825906
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 88  Q
    ||||||| |||||||||||||   ||||||||||| ||| |||| |||||||||||||||||||||| | ||  ||||||||||||    
T  48825821 tttggtcccttaacttattttcgaattttattttgattccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgtt 48825906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 48034026 - 48034086
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 71  Q
    |||||||||||||  |||||||||||||| |||||| ||||||||||||||||||| ||||    
T  48034026 cttaacttattttcggattttattttggtcctctaactataaagtgtctcaatttgatctc 48034086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 19622012 - 19622127
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    |||||||||  |||| |||||||| | ||| | |||||| | |||| |||||||||||||||||| |||||||||||||||||   ||||||  ||||||    
T  19622012 catttggtcctttaagttatttttggttttcactttggtcccctaactataaagtgtctcaatttagtctcataaatcttctgctatttactggtttggt 19622111  T
Q  101 catcttcgttaatttt 116  Q
    | ||| ||||| ||||    
T  19622112 cctctccgttagtttt 19622127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 29537249 - 29537134
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    |||| ||||||||||||||||| ||||| || ||  |   ||||||||||| ||| | ||||| ||| ||||||||||||| ||||||| |||||||||     
T  29537249 tttgttctcttaacttatttttggatttcatctttatctactaattataaaatgttttaatttcgtcccataaatcttctgccgtttacaattttggtcc 29537150  T
Q  103 tcttcgttaatttttt 118  Q
    ||| ||||| ||||||    
T  29537149 tctccgttagtttttt 29537134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 166
Target Start/End: Original strand, 35173212 - 35173319
Alignment:
Q  59 tcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattg 158  Q
    ||||||||||||||||| |||| |||||||||||||||||||||| |   ||| | || |||||| || |||| || |||| |||| ||||  |||||||    
T  35173212 tcaatttggtctcataactcttttgtcgtttactattttggtcatttctattagtattctaatgtctaataatttttatataatttcaaccgtttgattg 35173311  T
Q  159 caggtcta 166  Q
    ||||||||    
T  35173312 caggtcta 35173319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 43103404 - 43103305
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||| || ||||||||||||||   |||||||||| | | |||| || ||| | |||||||||||| |||||||| ||||| |||||||||||||||||    
T  43103404 atttgatcccttaacttattttttatttttattttgatcccctaactacaaaatatctcaatttggtttcataaattttctgccgtttactattttggtc 43103305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 49334432 - 49334329
Alignment:
Q  15 acttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaatt 114  Q
    |||||||||| | ||| |||||||| || ||| |||||| ||||||||| |||||  |||||||||||  |||||||||||||| ||||||  |||| ||    
T  49334432 acttattttttgttttcattttggtcctttaactataaattgtctcaatatggtccgataaatcttctaccgtttactattttgatcatctctgttagtt 49334333  T
Q  115 tttt 118  Q
    ||||    
T  49334332 tttt 49334329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 19579229 - 19579295
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| ||||||||||||| |||||| |||||||| | |||| |||||| |||||||||||||||    
T  19579229 tttggtcccttaacttattttcagatttcattttggtcccctaactataaaatgtctcaatttggtc 19579295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 32973148 - 32973214
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  32973148 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 32973214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 39288546 - 39288480
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  39288546 tttggtcacttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 39288480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 40502322 - 40502260
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 65  Q
    ||||||| |||||||||||||| |||||||||||||| | |||| |||||||| |||||||||    
T  40502322 tttggtcccttaacttatttttggattttattttggtcccctaactataaagtatctcaattt 40502260  T

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Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 48035431 - 48035365
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  48035431 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 48035365  T

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Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 51400224 - 51400322
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||||| |||||||||||||| | ||| | |||| ||| |||| |||||||||||||||||| ||| ||||||| ||| | ||| ||| |||||||||    
T  51400224 tttggtcccttaacttatttttggttttcactttgattccctaactataaagtgtctcaatttagtcccataaattttcagccgtataccattttggtc 51400322  T

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Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 52293630 - 52293564
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  52293630 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 52293564  T

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Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 19579401 - 19579316
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 88  Q
    ||||||| |||||||||||||  ||||| |||||||| |  ||| |||||||||||||||||||||| | ||  ||||||||||||    
T  19579401 tttggtcccttaacttattttcggatttcattttggtcccttaactataaagtgtctcaatttggtcccttatgtcttctgtcgtt 19579316  T

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Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 36626771 - 36626848
Alignment:
Q  34 tttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 111  Q
    |||||||  |||| ||| |||||| ||||||||||| | |||||||| ||||||||||| |||||||| |||||||||    
T  36626771 tttggtttcctaactatgaagtgtttcaatttggtcccttaaatcttatgtcgtttactgttttggtcctcttcgtta 36626848  T

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Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 43346505 - 43346448
Alignment:
Q  52 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgt 109  Q
    |||||| ||||||||||||||||| ||||||||||||||  ||||||||||| |||||    
T  43346505 aagtgtgtcaatttggtctcataactcttctgtcgtttatcattttggtcattttcgt 43346448  T

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Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 7583479 - 7583547
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 71  Q
    |||||||  ||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||||    
T  7583479 tttggtccattaacttattttcggatttcattttggtccactaactataaagtgtctcaatttggtctc 7583547  T

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Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 39133024 - 39133092
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    |||||| ||||||||||||||||| | ||| | |||||| | |||| ||||||||||||||||||||||    
T  39133024 catttgatctcttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtc 39133092  T

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Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 53347105 - 53347038
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 71  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||||    
T  53347105 tttggtcccttaacttattttcggatttcattttggtcc-ctaaatataaagtgtctcaatttggtctc 53347038  T

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Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 54752623 - 54752723
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| ||||||||||||||   ||| | ||| || | |||| ||||||||||||||||||||||   || ||||| || ||||||||||||||||    
T  54752623 catttggtcccttaacttatttttcattttcaatttagtcccctaactataaagtgtctcaatttggtcctgtatatcttatgccgtttactattttggt 54752722  T
Q  101 c 101  Q
    |    
T  54752723 c 54752723  T

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Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 33563958 - 33564021
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 66  Q
    ||||||| |||||||||||||| ||||| ||||| || | |||| |||||||||||||||||||    
T  33563958 tttggtcccttaacttatttttggatttcattttagtcccctaactataaagtgtctcaatttg 33564021  T

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Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 35633236 - 35633299
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 66  Q
    ||||||| |||||||||||||| ||||| |||||||| || ||| |||||| ||||||||||||    
T  35633236 tttggtcccttaacttatttttggatttcattttggtcctataactataaaatgtctcaatttg 35633299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 1301041 - 1301107
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||   ||||||||||||| |  ||| ||||||||||||||||||||||    
T  1301041 tttggtcccttaacttattttcgaattttattttggtcccataactataaagtgtctcaatttggtc 1301107  T

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Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 5416207 - 5416273
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| |||||| |||||||||||||||    
T  5416207 tttggtcccttaacttattttcggatttcattttggtcccctaactataaaatgtctcaatttggtc 5416273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 11483094 - 11482996
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    ||||||| ||||||||||||| |||||| |||||||| |  ||| |||||||||||| |||||| |||| ||  |||| |||||||  || ||||||||    
T  11483094 tttggtcccttaacttattttcagatttcattttggtcccttaactataaagtgtcttaatttgatctcttatgtcttttgtcgttatctcttttggtc 11482996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 46446378 - 46446444
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||||||||| |||||||   ||||||||||||| |  ||||||||||||||||||||| ||||    
T  46446378 tttggtctcttaatttattttcgaattttattttggtgccttaattataaagtgtctcaattcggtc 46446444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 52292603 - 52292665
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 65  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||    
T  52292603 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaattt 52292665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 53342733 - 53342791
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  53342733 cttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 53342791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 55015724 - 55015662
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 65  Q
    |||||| ||||||||||||||| ||||||| |||||| | |||||| |||| |||||||||||    
T  55015724 tttggtttcttaacttatttttggattttaatttggtcccctaattttaaactgtctcaattt 55015662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 55443657 - 55443591
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||   |||| |||||||| | |||| ||||||||||||||||||||||    
T  55443657 tttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtc 55443591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 167
Target Start/End: Original strand, 17345319 - 17345483
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||| |||||||||||||| | ||| |  ||||| | |||| || ||||| ||||||||||||  | |||||||||| ||  ||||  ||||||||    
T  17345319 atttggtcccttaacttatttttggttttcaggttggtcccctaactaaaaagtatctcaatttggttccttaaatcttct-tctgttacctttttggtc 17345417  T
Q  102 atcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctat 167  Q
     ||| ||||| ||||||||||| || || | || |||| |||| ||||| | ||||||| ||||||    
T  17345418 ctctccgttagttttttaatgtctaatatttttaatatgatttgaaccattcgattgcatgtctat 17345483  T

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Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 2225131 - 2225063
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 71  Q
    ||||||| |||||||||||||| ||||| | |||||| | |||| | |||| |||||||||||||||||    
T  2225131 tttggtcccttaacttatttttggatttcaatttggtcccctaactttaaactgtctcaatttggtctc 2225063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 17350211 - 17350143
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||||| |||||||||||||| | ||| | |||| | | |||| ||||||||||||||||||||||    
T  17350211 catttggtcccttaacttatttttggttttcaatttgttcccctaactataaagtgtctcaatttggtc 17350143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 19623018 - 19622906
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 110  Q
    |||||||||||||| | ||| | ||||||   |||| |||||||||||||||  ||||| | ||  ||||||||||||  ||||||||||||||   |||    
T  19623018 cttaacttattttttgttttcactttggtctcctaactataaagtgtctcaaactggtcccttatgtcttctgtcgttatctattttggtcatcgcagtt 19622919  T
Q  111 aattttttaatgt 123  Q
    |||||||| ||||    
T  19622918 aattttttgatgt 19622906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 30431384 - 30431456
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    ||||||| ||||||||||||||  |||| |||||||| |  ||||| |||| ||||||||||||||| |||||    
T  30431384 tttggtcccttaacttatttttgaatttcattttggtcccttaattttaaactgtctcaatttggtcccataa 30431456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 45422162 - 45422082
Alignment:
Q  113 ttttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatcaacac 193  Q
    ||||||||||| || || ||||||||| || ||||||| |||||||||||||||| ||| | ||  |||||||| ||||||    
T  45422162 ttttttaatgtctaatattcttgatatgatattaaccatttgattgcaggtctattgtatcaaaccgtgaaccaccaacac 45422082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 21127983 - 21128034
Alignment:
Q  52 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcat 103  Q
    |||||| ||||||||||| ||||| ||||||| ||||||| |||||||||||    
T  21127983 aagtgtgtcaatttggtcccataactcttctgccgtttaccattttggtcat 21128034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 48254995 - 48254902
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 97  Q
    ||||| || |||||||||||||| | ||||||||| | ||| | | ||||||||||||| |||||||| ||||| ||||||| ||||||| |||||    
T  48254995 atttgatcccttaacttattttttgtttttatttt-gatctttgactataaagtgtctc-atttggtcacataactcttctgccgtttaccatttt 48254902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 52705404 - 52705349
Alignment:
Q  14 aacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  52705404 aacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 52705349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 55442611 - 55442666
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 66  Q
    ||||||||||||| | |||| |||||||| | |||| |||||||||||||||||||    
T  55442611 cttaacttattttcaaatttcattttggtcccctaactataaagtgtctcaatttg 55442666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 189
Target Start/End: Complemental strand, 143178 - 143096
Alignment:
Q  107 cgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatca 189  Q
    |||||||||||||||||||| ||    |||| | |||||||||||||||||||||||  || ||| |||| |||| |||||||    
T  143178 cgttaattttttaatgtataatatgtatgatgtgattttaaccacttgattgcaggttcattgtatctaatagtgcaccatca 143096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 5417155 - 5417097
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctca 61  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||    
T  5417155 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctca 5417097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 189
Target Start/End: Original strand, 21515376 - 21515458
Alignment:
Q  107 cgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatca 189  Q
    |||||||||||||||||||| ||    | || | |||||||||||||||||||||||| || ||| |||| |||| |||||||    
T  21515376 cgttaattttttaatgtataatatgtataatgtgattttaaccacttgattgcaggtccattgtatctaatagtgcaccatca 21515458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 35174481 - 35174375
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 110  Q
    |||||||||||||    ||| |||||||| |  ||| ||| |||||| ||||  ||||| ||||| |||||| |||||||||||||||||||| |  |||    
T  35174481 cttaacttattttattttttcattttggtcccttaactattaagtgtttcaaaatggtcccataactcttctatcgtttactattttggtcatttctgtt 35174382  T
Q  111 aattttt 117  Q
    |||||||    
T  35174381 aattttt 35174375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 47854519 - 47854569
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaa 53  Q
    ||||||| ||||| |||||||| ||||| |||||||| |||||||||||||    
T  47854519 tttggtcccttaatttatttttggatttcattttggtcctctaattataaa 47854569  T

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Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 12060716 - 12060765
Alignment:
Q  52 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||||||||||| ||||||| | || || |||||||||||||||||    
T  12060716 aagtgtctcaatttggcctcataactattttgccgtttactattttggtc 12060765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 30838578 - 30838505
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    |||||||| ||||||||||||||  ||||||||||||| |  ||| | |||| | ||||||||||||| |||||    
T  30838578 atttggtcccttaacttatttttgaattttattttggtcccttaactttaaactatctcaatttggtcccataa 30838505  T

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Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 47765453 - 47765561
Alignment:
Q  8 tctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttc 107  Q
    ||||||||||||||||  | ||| | |||||| | |||| ||||||||||||||| ||| || | || |||||| || ||||| | |||||||||||| |    
T  47765453 tctcttaacttattttccgttttcactttggtcc-ctaactataaagtgtctcaaattgatcccttatatcttccgttgtttattgttttggtcatctcc 47765551  T
Q  108 gttaattttt 117  Q
    |||| |||||    
T  47765552 gttagttttt 47765561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 51214273 - 51214201
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    ||||||| ||||||||||||||  |||| |||||||| |  ||| | |||| ||||||||||||||| |||||    
T  51214273 tttggtcccttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtcccataa 51214201  T

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Target: scaffold0051 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 22173 - 22256
Alignment:
Q  40 tctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgt 123  Q
    ||||||| |||||| |||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22173 tctctaactataaaatgtctcaatttgttcacataaatcttctgtcgtttactattttggtcatctccgttaattttttaatgt 22256  T

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Target: scaffold0051; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 40009 - 39930
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttc 81  Q
    ||||||||||||||||||||||| ||||| | |||||| | |||| |||||||||||||||||||||| |||||||||||    
T  40009 atttggtctcttaacttatttttggatttcactttggtcccctaagtataaagtgtctcaatttggtcccataaatcttc 39930  T

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Target: scaffold0369 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 12918 - 13021
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 101  Q
    |||||||||||||||||||||||   ||||| |||||| |  |||||||||||||||||||||||||||||||||| || ||||||||| |||||||||     
T  12918 atttggtctcttaacttatttttgatttttactttggtcccataattataaagtgtctcaatttggtctcataaatattttgtcgtttagtattttggta 13017  T
Q  102 atct 105  Q
    ||||    
T  13018 atct 13021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 737 - 621
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | | | | |||||| | |||| |||||||||||||||||| ||| ||||||||||||| ||||||| ||||||||    
T  737 catttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttggt 638  T
Q  101 catcttcgttaattttt 117  Q
    ||||| ||||| |||||    
T  637 catctccgttagttttt 621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 537 - 653
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | | | | |||||| | |||| |||||||||||||||||| ||| ||||||||||||| ||||||| ||||||||    
T  537 catttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttggt 636  T
Q  101 catcttcgttaattttt 117  Q
    ||||| ||||| |||||    
T  637 catctccgttagttttt 653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 9587 - 9471
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | | | | |||||| | |||| |||||||||||||||||| ||| ||||||||||||| ||||||| ||||||||    
T  9587 catttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttggt 9488  T
Q  101 catcttcgttaattttt 117  Q
    ||||| ||||| |||||    
T  9487 catctccgttagttttt 9471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 8386 - 8549
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||||||| |||||||||||||| | ||| | |||| | | |||| |||||| |||||||| |||||| ||||||||||| ||| |||||||||| |||    
T  8386 catttggtcccttaacttatttttggttttcactttgctcccctaactataaactgtctcaaattggtcccataaatcttcagtcatttactatttcggt 8485  T
Q  101 catcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 164  Q
    ||||| ||||| ||||||||||| ||  | |  |||||| |||| ||||| | |||||||||||    
T  8486 catctccgttagttttttaatgtgtaacatttctgatataatttcaaccattcgattgcaggtc 8549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 56809 - 56718
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttact 92  Q
    ||||||||| |||||||||||||| ||||| | |||||| | |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  56809 catttggtcccttaacttattttttgatttcactttggtcccctaattataaagtgtctcaatttggtcctataaatcttctgccgtttact 56718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 54598 - 54678
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttc 81  Q
    ||||||| | |||||| || |||| | |||||||||||| || |||||||||||||||||||||||||| |||||||||||    
T  54598 catttggccccttaacgtaattttggtttttattttggtcctttaattataaagtgtctcaatttggtcccataaatcttc 54678  T

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Target: scaffold0178 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 2372 - 2257
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||| | ||| |||||||| | ||||||||||||||| ||||||||||| ||||| ||||||   ||||||||||||||||     
T  2372 tttggtcccttaacttatttttggttttcattttggtcccctaattataaagtgtttcaatttggtcccataactcttctactgtttactattttggtcc 2273  T
Q  103 tcttcgttaatttttt 118  Q
    | | ||||| ||||||    
T  2272 tttccgttagtttttt 2257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 1229 - 1334
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 110  Q
    |||||||||||||| | ||| |||||||| | ||||||||||||| |||||||||||||  ||||  |||||  ||||||| ||| ||||| ||| ||||    
T  1229 cttaacttatttttgg-tttcattttggtcccctaattataaagtctctcaatttggtcatataacccttctaccgtttacaattgtggtcctctccgtt 1327  T
Q  111 aattttt 117  Q
    | |||||    
T  1328 atttttt 1334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 1764 - 1872
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| |||||||||||||  ||||| |||||||| | ||||||||||||||||||||||||||| | ||  ||||||||||||  || ||||||||     
T  1764 tttggtcccttaacttattttcggatttcattttggtcccctaattataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcc 1863  T
Q  103 tcttcgtta 111  Q
    ||| |||||    
T  1864 tctccgtta 1872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2127 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 613 - 514
Alignment:
Q  12 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 111  Q
    ||||||||||||| | ||| | || ||| | |||| ||||||||||||||||||||| ||||||||||| || ||||||||||||||||| ||| |||||    
T  613 ttaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggtgtcataaatcttatgccgtttactattttggtcctctccgtta 514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 5178 - 5245
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtct 70  Q
    ||||||| |||||||||||||| |||||| ||||||| | |||| |||||||||||||||||||||||    
T  5178 tttggtcccttaacttatttttggattttcttttggtcccctaactataaagtgtctcaatttggtct 5245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 164
Target Start/End: Complemental strand, 42402 - 42292
Alignment:
Q  54 gtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccactt 153  Q
    |||| |||||||| || ||||||||||||||||||||||||||||||| |||  |||| | ||||||||| |||   | ||||||| |||| ||||  ||    
T  42402 gtgtatcaatttgatcccataaatcttctgtcgtttactattttggtcctctctgttagtattttaatgtttatattttttgatatgatttcaaccgttt 42303  T
Q  154 gattgcaggtc 164  Q
    |||||||||||    
T  42302 gattgcaggtc 42292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 145978 - 145861
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    |||||||| |||||| |||||||| | ||| | |||  | | |||| |||||| ||||| |||||||||  ||||||||| || ||||||||||||||||    
T  145978 catttggtttcttaatttatttttggttttcaatttaatcccctaactataaaatgtcttaatttggtccaataaatcttatgccgtttactattttggt 145879  T
Q  101 catcttcgttaatttttt 118  Q
    ||||| ||||||| ||||    
T  145878 catctccgttaatatttt 145861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 24922 - 24802
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| ||||| |||||||| | ||| | |||||| | ||||||||||||||| ||||||||||| | ||  |||||   ||||  ||||||||||||    
T  24922 tttggtcccttaatttatttttggttttcagtttggtcccctaattataaagtgtttcaatttggtcccttatgtcttcctccgttacctattttggtca 24823  T
Q  103 tcttcgttaattttttaatgt 123  Q
    ||| ||||| |||||||||||    
T  24822 tctccgttagttttttaatgt 24802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 23417 - 23494
Alignment:
Q  5 tggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttct 82  Q
    ||||| |||||||||||||| | ||| | |||||| | |||| |||||| ||||||||||||||| ||||| ||||||    
T  23417 tggtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcccataactcttct 23494  T

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Target: scaffold0045 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 77290 - 77178
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||| |||||||||||||||||| | ||| | ||||||   |||| ||||||| || ||||||||||| ||||||| ||||  |||||||| |||||||    
T  77290 catttagtctcttaacttattttttgttttcactttggtctcctaactataaagcgtttcaatttggtcccataaatattctaccgtttactgttttggt 77191  T
Q  101 catcttcgttaat 113  Q
    | ||| |||||||    
T  77190 cttctccgttaat 77178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 75762 - 75813
Alignment:
Q  11 cttaacttatttttagattttattttggttctctaattataaagtgtctcaa 62  Q
    ||||| |||||||| | ||||| |||||| ||||||||||||||||||||||    
T  75762 cttaatttattttttgtttttactttggtcctctaattataaagtgtctcaa 75813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 73095 - 72929
Alignment:
Q  1 catttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 100  Q
    ||||| ||| |||||||||||||| | ||| | |||||| | ||||  |||||||||| ||| |||||||| ||  ||||||||||||  || |||||||    
T  73095 catttagtcccttaacttatttttggttttcactttggtcccctaacaataaagtgtcacaaattggtctcttatgtcttctgtcgttacctcttttggt 72996  T
Q  101 catcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctat 167  Q
    | ||| ||||| |||||| |  |||| || | || |||| ||| |||||  ||||||||||||||||    
T  72995 cctctccgttagtttttttaattataatatttttaatatgattataaccgtttgattgcaggtctat 72929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 11715 - 11872
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 102  Q
    ||||||| ||||||||||||||   ||| | ||| || | ||||||||||||||| ||||||||||| | ||  ||||||   |||  |||||||||||     
T  11715 tttggtcccttaacttattttttattttcagtttagtcccctaattataaagtgtttcaatttggtcccttatgtcttctccagttacctattttggtcc 11814  T
Q  103 tcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgca 160  Q
    ||| ||||| ||||||||||| || || | ||||| | |||||||||| | |||||||    
T  11815 tctccgttagttttttaatgtctaatatttttgatgtgattttaaccattcgattgca 11872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 96167 - 96269
Alignment:
Q  1 catttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttgg 99  Q
    |||||||||  ||||||||||||  |||||| | |||||| | |||| ||||||||||||||||||| ||  |||||||||||  ||||||| |||||||    
T  96167 catttggtccattaacttattttc-gattttcaatttggtcccctaactataaagtgtctcaatttgatccgataaatcttcttccgtttaccattttgg 96265  T
Q  100 tcat 103  Q
    ||||    
T  96266 tcat 96269  T

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Target: scaffold0038 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 25931 - 25997
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||||||||||   |||| |||||||| | |||| ||||||||||||||||||||||    
T  25931 tttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtc 25997  T

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Target: scaffold0038; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 27014 - 26960
Alignment:
Q  12 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 66  Q
    ||||||||||||  ||||| |||||||| | |||| |||||||||||||||||||    
T  27014 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttg 26960  T

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Target: scaffold1827 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold1827
Description:

Target: scaffold1827; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 1156 - 1100
Alignment:
Q  12 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||||||||  |||||||||| ||| |||||| ||||||||||||||||||||||    
T  1156 ttaacttattttcggattttattt-ggtcctctaactataaagtgtctcaatttggtc 1100  T

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Target: scaffold0166 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 4284 - 4216
Alignment:
Q  44 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaa 112  Q
    ||||||| ||||||||||||||| |||||||| || |||| ||||||| |||||| || ||| ||||||    
T  4284 taattattaagtgtctcaatttgatctcataactcgtctgccgtttaccattttgttcctctccgttaa 4216  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 458553 - 458501
Alignment:
Q  17 ttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    |||||||  |||||||||||||| | ||||||||||||||||| |||||||||    
T  458553 ttattttcggattttattttggtcccctaattataaagtgtcttaatttggtc 458501  T

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Target: scaffold0687 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 6663 - 6606
Alignment:
Q  11 cttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggt 68  Q
    ||||| |||||||| |||||| |||||||| ||||||||||||| ||||||||||||||    
T  6663 cttaaattattttt-gattttcattttggtcctctaattataaaatgtctcaatttggt 6606  T

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Target: scaffold0630 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 2019 - 2085
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| ||| |||||||||||||||| |||||||| |  ||| | |||| |||||||||||||||    
T  2019 tttggtcccttgacttatttttagatttcattttggtcccttaactttaaattgtctcaatttggtc 2085  T

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Target: scaffold0064 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 20689 - 20623
Alignment:
Q  3 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 69  Q
    ||||||| |||||| |||||||  |||||| |||||||| |||| | |||| |||||||||||||||    
T  20689 tttggtcccttaacatatttttgaattttaatttggttccctaactttaaactgtctcaatttggtc 20623  T

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Target: scaffold0839 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 233 - 160
Alignment:
Q  2 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 75  Q
    |||||||| ||||||||||||||| |||| |||||| | |  ||||| ||||  |||||||||||||| |||||    
T  233 atttggtcccttaacttatttttaaatttaattttgatcccttaattttaaaccgtctcaatttggtcgcataa 160  T

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