View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18847_low_36 (Length: 245)
Name: NF18847_low_36
Description: NF18847
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18847_low_36 |
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Alignment Details
Target: chr5 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 14965062 - 14965287
Alignment:
| Q |
11 |
ttatactagttctaactcttaaatttatgattatatgtcatctttgtattacaactactattaatactataagattaatcactattaattattatcgcat |
110 |
Q |
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| T |
14965062 |
ttatactagttccaactcttaaatttatgattatatgtcatctttctattacaactactattaatactataagattaatcactattaattattatcgcat |
14965161 |
T |
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| Q |
111 |
atggggtcattttctttgttgatttgtatatgtttggttaggtttgacaaactccaaaaagcctaccttttggtgacaaacagagacagaggagaatcaa |
210 |
Q |
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| T |
14965162 |
atggggtcattttctttgttgatttgtatatgtttggttaggtttgataaactccaaaaagcctaccttttggtaacaaacagagacagaggagaatcaa |
14965261 |
T |
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| Q |
211 |
atgatataatctccaataaaatagtg |
236 |
Q |
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|||||||||||||||||||||||||| |
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| T |
14965262 |
atgatataatctccaataaaatagtg |
14965287 |
T |
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