View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18850_high_4 (Length: 433)
Name: NF18850_high_4
Description: NF18850
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18850_high_4 |
 | |
|
| [»] scaffold0010 (1 HSPs) |
| | |
|
| [»] scaffold0017 (2 HSPs) |
| | |
|
| [»] scaffold0254 (1 HSPs) |
| | |
|
| [»] scaffold0075 (1 HSPs) |
| | |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
| [»] scaffold0203 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 346; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 6 - 419
Target Start/End: Original strand, 16345524 - 16345935
Alignment:
| Q |
6 |
aagaaaagaaatacatgacatacttgccgtacaattattctaaaaataaaacattaaaattattctttgagaattaacgtgacttatttgttatcttcat |
105 |
Q |
| |
|
||||||||||||| |||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16345524 |
aagaaaagaaataaatgacatactaaccttacaattattctaaaaataaaacactaaaattattctttgagaattaacgtgacttatttgttatcttcat |
16345623 |
T |
|
| Q |
106 |
tttcaattgataaaagctgctccaaacaaattccaaaaccgttgcaagctgccacctttaagtgtagtaattactatcaagctgccacattttaattcta |
205 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
16345624 |
tttcaattgataaaaactgctccaaacaaattccaaaaccgttgcaagctgccacctttaagtgtagtaattactatcaagctgccaca-tttaattcta |
16345722 |
T |
|
| Q |
206 |
aaaccgttatgtaccagccccatttatcttcattggaattgacctgaatgattgtgatatttaaaaatcacgttttatttggtctttggtgagctagtac |
305 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
16345723 |
aaaccgttatgaaccagcctcatttatcttcattggaattgacctgaatggttgtgacatttaaaaatcacgttttgtttggtctttggtgagctagtac |
16345822 |
T |
|
| Q |
306 |
caggaatcaaaataattctctactttggaaacaataaaaaccaacgaaattgtcccttgagcagcttgtgacttaatactccacttcatgtatcaaatta |
405 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
16345823 |
caggaatcaaaataattctctactttggaaacaataaaaaccaac-aaattgtcccttgagcagcttgtgacttagtactccacttgatgtatcaaatta |
16345921 |
T |
|
| Q |
406 |
tgcaatgatgaatc |
419 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
16345922 |
tgcaatgatgaatc |
16345935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 338; Significance: 0; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 6 - 419
Target Start/End: Original strand, 22062400 - 22062813
Alignment:
| Q |
6 |
aagaaaagaaatacatgacatacttgccgtacaattattctaaaaataaaacattaaaattattctttgagaattaacgtgacttatttgttatcttcat |
105 |
Q |
| |
|
||||||||||||| |||||||||| ||| | ||||||||||||||||||||| ||||||||||||||| ||||| ||||| || | |||||||||| |
|
|
| T |
22062400 |
aagaaaagaaataaatgacatactagcctttaaattattctaaaaataaaacactaaaattattctttggaaattagcgtgagttgcatattatcttcat |
22062499 |
T |
|
| Q |
106 |
tttcaattgataaaagctgctccaaacaaattccaaaaccgttgcaagctgccacctttaagtgtagtaattactatcaagctgccacattttaattcta |
205 |
Q |
| |
|
|| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22062500 |
ttccaattgatgaaagctgctccaaacaaattccaaaaccgttgcaagctgccacctttaagtgtagtaattactatcaagctgccacattttaattcta |
22062599 |
T |
|
| Q |
206 |
aaaccgttatgtaccagccccatttatcttcattggaattgacctgaatgattgtgatatttaaaaatcacgttttatttggtctttggtgagctagtac |
305 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22062600 |
aaaccgttatgaaccagccccatttatcttcattgaaattgacctgaatgattgtgacatttaaaaatcacgttttatttggtctttggtgagctagtac |
22062699 |
T |
|
| Q |
306 |
caggaatcaaaataattctctactttggaaacaataaaaaccaacgaaattgtcccttgagcagcttgtgacttaatactccacttcatgtatcaaatta |
405 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22062700 |
caggaatcaaaataattctctactttggaaacaataaaaaccaacgaaattgtcccttgagcagcttgtgacttaatactccacttcatgtatcaaatta |
22062799 |
T |
|
| Q |
406 |
tgcaatgatgaatc |
419 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
22062800 |
tgcaatgatgaatc |
22062813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 6473281 - 6473160
Alignment:
| Q |
6 |
aagaaaagaaatacatgacatacttgccgtacaattattctaaaaataaaacattaaaattattctttgagaattaacgtgacttatttgttatcttcat |
105 |
Q |
| |
|
||||||||||||| |||||||||| ||| |||||||||||||||||||||||| |||||||||||||||| ||||| ||||| || | |||||||||| |
|
|
| T |
6473281 |
aagaaaagaaataaatgacatactagccttacaattattctaaaaataaaacactaaaattattctttgaaaattagcgtgagttgcatattatcttcat |
6473182 |
T |
|
| Q |
106 |
tttcaattgataaaagctgctc |
127 |
Q |
| |
|
||||||||||| |||||||||| |
|
|
| T |
6473181 |
tttcaattgatgaaagctgctc |
6473160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 289; Significance: 1e-162; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 6 - 350
Target Start/End: Complemental strand, 18781648 - 18781305
Alignment:
| Q |
6 |
aagaaaagaaatacatgacatacttgccgtacaattattctaaaaataaaacattaaaattattctttgagaattaacgtgacttatttgttatcttcat |
105 |
Q |
| |
|
||||||||||||| |||||||||| ||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18781648 |
aagaaaagaaataaatgacatactagccttacaattattctaaaaataaatcactaaaattattctttgagaattaacgtgacttatttgttatcttcat |
18781549 |
T |
|
| Q |
106 |
tttcaattgataaaagctgctccaaacaaattccaaaaccgttgcaagctgccacctttaagtgtagtaattactatcaagctgccacattttaattcta |
205 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
18781548 |
tttcaattgataaaaactgctccaaacaaattccaaaaccgttgcaagctgccacctttaagtgtagtaattactatcaaactgccaca-tttaattcta |
18781450 |
T |
|
| Q |
206 |
aaaccgttatgtaccagccccatttatcttcattggaattgacctgaatgattgtgatatttaaaaatcacgttttatttggtctttggtgagctagtac |
305 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
18781449 |
aaaccgttatgaaccagcctcatttatcttcattggaattgacctgaatggttgtgacatttaaaaatcacgttttgtttggtctttggtgagctagtac |
18781350 |
T |
|
| Q |
306 |
caggaatcaaaataattctctactttggaaacaataaaaaccaac |
350 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18781349 |
caggaatcaaaataattctctactttggaaacaataaaaaccaac |
18781305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 20417872 - 20417993
Alignment:
| Q |
6 |
aagaaaagaaatacatgacatacttgccgtacaattattctaaaaataaaacattaaaattattctttgagaattaacgtgacttatttgttatcttcat |
105 |
Q |
| |
|
||||||||||||| |||||||||| ||| |||||||||||||||||||||||| |||||||||||||||| ||||| ||||| || | |||| ||||| |
|
|
| T |
20417872 |
aagaaaagaaataaatgacatactagccttacaattattctaaaaataaaacactaaaattattctttgaaaattagcgtgagttgcatattattttcat |
20417971 |
T |
|
| Q |
106 |
tttcaattgataaaagctgctc |
127 |
Q |
| |
|
|| |||||||| |||||||||| |
|
|
| T |
20417972 |
ttccaattgatgaaagctgctc |
20417993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 2148073 - 2148194
Alignment:
| Q |
6 |
aagaaaagaaatacatgacatacttgccgtacaattattctaaaaataaaacattaaaattattctttgagaattaacgtgacttatttgttatcttcat |
105 |
Q |
| |
|
||||||||||||| |||||||||| || |||||||||||||||| |||||||||||||||||||||||| ||||| ||||| || | |||| ||||| |
|
|
| T |
2148073 |
aagaaaagaaataaatgacatactaaccttacaattattctaaaattaaaacattaaaattattctttgaaaattagcgtgaattgcatattattttcat |
2148172 |
T |
|
| Q |
106 |
tttcaattgataaaagctgctc |
127 |
Q |
| |
|
|| |||||||| |||||||||| |
|
|
| T |
2148173 |
ttccaattgatgaaagctgctc |
2148194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 171; Significance: 1e-91; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 229 - 419
Target Start/End: Original strand, 23736003 - 23736193
Alignment:
| Q |
229 |
ttatcttcattggaattgacctgaatgattgtgatatttaaaaatcacgttttatttggtctttggtgagctagtaccaggaatcaaaataattctctac |
328 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
23736003 |
ttatcttcattggaattgacctgattgattgtgacatttaaaaatcacgttttatttggtctttggtgagctagtaccaggaatcaaaataattctttac |
23736102 |
T |
|
| Q |
329 |
tttggaaacaataaaaaccaacgaaattgtcccttgagcagcttgtgacttaatactccacttcatgtatcaaattatgcaatgatgaatc |
419 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
23736103 |
tttggaaacaataaaaaccaacgaaattgtcccttgaccagcttgtgacttaatactccacttcatgtatcaaattatgaaatgatgaatc |
23736193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 15409106 - 15408956
Alignment:
| Q |
60 |
taaaattattctttgagaattaacgtgacttatttgttatcttcattttcaattgataaaagctgctccaaacaaattccaaaaccgttgcaagctgcca |
159 |
Q |
| |
|
|||||||||||||||| |||| ||||||||| ||||||||||| ||| ||||||||| || |||||||| |||||||||||||| | |||||||||||| |
|
|
| T |
15409106 |
taaaattattctttgataattcacgtgacttgcttgttatcttcttttccaattgatagaatctgctccatacaaattccaaaactgctgcaagctgcca |
15409007 |
T |
|
| Q |
160 |
cctttaagtgtagtaattactatcaagctgccacattttaattctaaaaccgtt |
213 |
Q |
| |
|
|| |||| | | |||||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
15409006 |
ccattaaat---gcaattactatcaaactgccatcttttaattctaaaaccgtt |
15408956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0010 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0010
Description:
Target: scaffold0010; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 136546 - 136383
Alignment:
| Q |
48 |
aaaataaaacattaaaattattctttgagaattaacgtgacttatttgttatcttcattttcaattgataaaagctgctccaaacaaattccaaaaccgt |
147 |
Q |
| |
|
|||||||| || ||||||| ||||||| || ||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| ||| | |
|
|
| T |
136546 |
aaaataaagcaataaaattgttctttgggatttaacgtgactagcttgttatcttcattttcaattgataaaagctggcccaaacaacttctgtaactgc |
136447 |
T |
|
| Q |
148 |
tgcaagctgccacctttaagtgtagtaattactatcaagctgccacattttaattctaaaaccgtta |
214 |
Q |
| |
|
||||||||||| ||||||| | |||||||||||||||||||| | ||| |||||||||||||||| |
|
|
| T |
136446 |
tgcaagctgcctcctttaaat---gtaattactatcaagctgcctcctttcaattctaaaaccgtta |
136383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0017
Description:
Target: scaffold0017; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 60 - 214
Target Start/End: Original strand, 93 - 247
Alignment:
| Q |
60 |
taaaattattctttgagaattaacgtgacttat-ttgttatcttcattttcaattgataaaagctgctccaaacaaattccaaaaccgttgcaagctgcc |
158 |
Q |
| |
|
|||||||||||||||| |||| ||||||||| ||||| ||||| ||| ||||||||| || |||||||| |||||||||||||| | ||||||||||| |
|
|
| T |
93 |
taaaattattctttgataattcacgtgactttgcttgttttcttcttttccaattgatagaatctgctccatacaaattccaaaactgctgcaagctgcc |
192 |
T |
|
| Q |
159 |
acctttaagtgtagtaattactatcaagctgccaca--ttttaattctaaaaccgtta |
214 |
Q |
| |
|
||| |||| | | ||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
193 |
accattaaat---gcaattactatcaagctgccacaccttttaattctaaaaccgtta |
247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 60 - 161
Target Start/End: Original strand, 4893 - 4995
Alignment:
| Q |
60 |
taaaattattctttgagaattaacgtgacttat-ttgttatcttcattttcaattgataaaagctgctccaaacaaattccaaaaccgttgcaagctgcc |
158 |
Q |
| |
|
|||||||||||||||| |||| ||||||||| ||||||||||| ||| ||||||||| || |||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
4893 |
taaaattattctttgataattcacgtgactttgcttgttatcttcttttccaattgatagaatctgctccatacaaattccaaaaccgctgcaagctgcc |
4992 |
T |
|
| Q |
159 |
acc |
161 |
Q |
| |
|
||| |
|
|
| T |
4993 |
acc |
4995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0254 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0254
Description:
Target: scaffold0254; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 24536 - 24657
Alignment:
| Q |
6 |
aagaaaagaaatacatgacatacttgccgtacaattattctaaaaataaaacattaaaattattctttgagaattaacgtgacttatttgttatcttcat |
105 |
Q |
| |
|
||||||||||||| |||||||||| || |||||||||||||||| |||||||||||||||||||||||| ||||| ||||| || | |||| ||||| |
|
|
| T |
24536 |
aagaaaagaaataaatgacatactaaccttacaattattctaaaattaaaacattaaaattattctttgaaaattagcgtgaattgcatattattttcat |
24635 |
T |
|
| Q |
106 |
tttcaattgataaaagctgctc |
127 |
Q |
| |
|
|| |||||||| |||||||||| |
|
|
| T |
24636 |
ttccaattgatgaaagctgctc |
24657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 17266957 - 17267078
Alignment:
| Q |
6 |
aagaaaagaaatacatgacatacttgccgtacaattattctaaaaataaaacattaaaattattctttgagaattaacgtgacttatttgttatcttcat |
105 |
Q |
| |
|
||||||||||||| |||||||||| ||| | ||||||||||||||||||||| |||||||||||||||| ||||| ||||| || | |||||||||| |
|
|
| T |
17266957 |
aagaaaagaaataaatgacatactagcctttaaattattctaaaaataaaacactaaaattattctttgaaaattagcgtgaattgcatattatcttcat |
17267056 |
T |
|
| Q |
106 |
tttcaattgataaaagctgctc |
127 |
Q |
| |
|
|| |||||||| |||||||||| |
|
|
| T |
17267057 |
ttccaattgatgaaagctgctc |
17267078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 34098616 - 34098495
Alignment:
| Q |
6 |
aagaaaagaaatacatgacatacttgccgtacaattattctaaaaataaaacattaaaattattctttgagaattaacgtgacttatttgttatcttcat |
105 |
Q |
| |
|
||||||||||||| |||||||||| ||| |||||||||||||||||||||||| |||||||||||||||| ||||| ||||| || | |||||||||| |
|
|
| T |
34098616 |
aagaaaagaaataaatgacatactagccttacaattattctaaaaataaaacactaaaattattctttgaaaattagcgtgaattgcatattatcttcat |
34098517 |
T |
|
| Q |
106 |
tttcaattgataaaagctgctc |
127 |
Q |
| |
|
|| ||||| || | |||||||| |
|
|
| T |
34098516 |
ttccaattcatgagagctgctc |
34098495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 14873755 - 14873797
Alignment:
| Q |
172 |
gtaattactatcaagctgccacattttaattctaaaaccgtta |
214 |
Q |
| |
|
|||||||||||||||||||| | ||| |||||||||||||||| |
|
|
| T |
14873755 |
gtaattactatcaagctgcctcctttcaattctaaaaccgtta |
14873797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0075 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0075
Description:
Target: scaffold0075; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 26123 - 26286
Alignment:
| Q |
48 |
aaaataaaacattaaaattattctttgagaattaacgtgacttatttgttatcttcattttcaattgataaaagctgctccaaacaaattccaaaaccgt |
147 |
Q |
| |
|
|||||||| || ||||||| ||||||| || ||||||||||| ||||||||||||||| |||||||||||||||| ||||| |||||| |||| | |
|
|
| T |
26123 |
aaaataaagcaataaaattgttctttgggatttaacgtgactagcttgttatcttcatttccaattgataaaagctggcccaaaaaaattctgaaactgc |
26222 |
T |
|
| Q |
148 |
tgcaagctgccacctttaagtgtagtaattactatcaagctgccacattttaattctaaaaccgtta |
214 |
Q |
| |
|
||||||||| | |||| || | |||||||||||||||||||| | ||| |||||||||||||||| |
|
|
| T |
26223 |
tgcaagctgactccttaaaat---gtaattactatcaagctgcctcctttcaattctaaaaccgtta |
26286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 33111 - 33030
Alignment:
| Q |
6 |
aagaaaagaaatacatgacatacttgccgtacaattattctaaaaataaaacattaaaattattctttgagaattaacgtga |
87 |
Q |
| |
|
||||||||||||| |||||||||| ||| |||||||||||||||||||||||| |||||||||||||||| ||||| ||||| |
|
|
| T |
33111 |
aagaaaagaaataaatgacatactagccttacaattattctaaaaataaaacactaaaattattctttgaaaattagcgtga |
33030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0203 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0203
Description:
Target: scaffold0203; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 214
Target Start/End: Original strand, 1941 - 2043
Alignment:
| Q |
109 |
caattgataaaagctgctccaaacaaattccaaaaccgttgcaagctgccacctttaagtgtagtaattactatcaagctgccacattttaattctaaaa |
208 |
Q |
| |
|
|||||||||||||||| |||||||| ||| ||| | ||||||||||| ||||||| |||| ||||||||||||||||| | ||| |||||||||| |
|
|
| T |
1941 |
caattgataaaagctggcccaaacaacttctgtaactgctgcaagctgcctcctttaaatgta---attactatcaagctgcctcctttcaattctaaaa |
2037 |
T |
|
| Q |
209 |
ccgtta |
214 |
Q |
| |
|
|||||| |
|
|
| T |
2038 |
ccgtta |
2043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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