View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18851_high_3 (Length: 229)
Name: NF18851_high_3
Description: NF18851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18851_high_3 |
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Alignment Details
Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 17 - 214
Target Start/End: Original strand, 54972376 - 54972573
Alignment:
| Q |
17 |
agtgagaatgtacactttgttgatcccactattgatgcagttactcattggcacatcaatcagcctataagcgcctccaattggaacctagtataggaaa |
116 |
Q |
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| T |
54972376 |
agtgagaatgtacactttgttgatcccactattgatgcagttactcattggcacatcaatcagcctataagcgcctccaattggaacctagtataggaaa |
54972475 |
T |
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| Q |
117 |
ccataaccaacttaatatgtagctgcttacattatggaaattgaagtgcatgatagcattagtatagactactttattacaccatttacgtttttcat |
214 |
Q |
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| T |
54972476 |
ccataaccaacttaatatgtagctgcttacattatggaaattgaagtgcatgatagcattagcatagactactttattgcaccatttacgtttttcat |
54972573 |
T |
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