View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18852_high_26 (Length: 265)
Name: NF18852_high_26
Description: NF18852
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18852_high_26 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 16 - 249
Target Start/End: Original strand, 25116447 - 25116680
Alignment:
| Q |
16 |
ctgtgtcatgaatattctataagctgtagataatacgagtattgatcacaaacaaaaaagaataatctgaggactcccacacaaaaccttggacttaggt |
115 |
Q |
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| T |
25116447 |
ctgtgtcatgaatattctataaggtgtagataatacgagtattgatcacaaacaaaaaagaataatctgaggattcccacacaaaaccttggacttaggt |
25116546 |
T |
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| Q |
116 |
taaagaaattattagtccacaaattattgacaacacacttacattcactttttaacattttgcaataatataatttctacgagtaagatgggtggtttag |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25116547 |
taaagaaattattagtccacaaattattgacaacacacttacattcactttttaacattttgcaataatataatttctacgagtaagatgggtggtttag |
25116646 |
T |
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| Q |
216 |
ctttatcgacatgactattttgagcacatggata |
249 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
25116647 |
ctttatcgacatgactattttgagcacatggata |
25116680 |
T |
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